Miyakogusa Predicted Gene
- Lj1g3v2251620.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2251620.1 CUFF.28746.1
(509 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 719 0.0
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 1e-54
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 3e-54
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 192 5e-49
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 191 8e-49
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 182 6e-46
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 181 8e-46
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 2e-45
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 3e-45
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 179 5e-45
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 5e-45
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 7e-45
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 178 7e-45
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 178 7e-45
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 7e-45
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 1e-44
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 2e-44
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 176 4e-44
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 176 4e-44
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 175 8e-44
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 3e-43
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 3e-43
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 172 4e-43
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 6e-43
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 6e-43
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 1e-42
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 170 2e-42
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 168 8e-42
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 163 2e-40
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 4e-40
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 4e-40
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 5e-40
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 5e-40
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 7e-40
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 9e-40
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 3e-39
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 4e-39
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 5e-39
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 5e-39
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 7e-39
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 158 7e-39
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 8e-39
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 158 9e-39
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 1e-38
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 3e-38
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 4e-38
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 4e-38
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 4e-38
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 7e-38
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 8e-38
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 4e-37
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 5e-37
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 1e-36
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 3e-36
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 4e-36
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 149 5e-36
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 7e-36
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 8e-36
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 9e-36
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 1e-35
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 147 1e-35
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 3e-35
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 6e-35
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 6e-35
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 9e-35
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 6e-34
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 8e-34
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 139 6e-33
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 8e-33
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 8e-33
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 1e-32
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 1e-32
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 6e-32
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 135 7e-32
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 132 5e-31
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 132 7e-31
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 8e-31
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 1e-30
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 130 2e-30
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 3e-30
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 6e-30
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 127 2e-29
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 123 3e-28
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 122 7e-28
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 120 2e-27
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 119 4e-27
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 9e-27
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 1e-26
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 7e-26
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 9e-25
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 111 1e-24
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 110 2e-24
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 108 6e-24
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 108 9e-24
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 107 2e-23
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 99 6e-21
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 99 7e-21
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 97 3e-20
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 4e-20
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 95 1e-19
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 93 5e-19
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 91 2e-18
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 91 2e-18
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 3e-18
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 4e-18
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 89 7e-18
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 7e-17
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 85 1e-16
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 84 3e-16
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 84 3e-16
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 4e-16
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 82 8e-16
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 80 2e-15
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 80 3e-15
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 80 4e-15
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 6e-15
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 79 6e-15
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 78 1e-14
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 77 2e-14
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 4e-14
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 77 4e-14
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 5e-14
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 74 2e-13
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 73 4e-13
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 73 5e-13
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 73 5e-13
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 73 5e-13
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 73 5e-13
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 6e-13
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 72 8e-13
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 72 1e-12
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 72 1e-12
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 70 2e-12
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 70 4e-12
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 70 4e-12
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 68 2e-11
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 68 2e-11
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 67 3e-11
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 66 6e-11
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 7e-11
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 9e-11
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 64 2e-10
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 64 2e-10
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 64 3e-10
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 64 3e-10
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 63 4e-10
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 6e-10
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 62 6e-10
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT3G04260.1 | Symbols: PTAC3 | plastid transcriptionally active ... 62 9e-10
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 9e-10
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 62 9e-10
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 62 1e-09
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 57 2e-08
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 57 3e-08
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 57 4e-08
AT2G48000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 55 1e-07
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 50 3e-06
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/536 (64%), Positives = 418/536 (77%), Gaps = 31/536 (5%)
Query: 4 FVKSSVRLHRSLSPLSPTTFKLYSSPAS----------------------------PQHD 35
++S + L R+LS +SP K +S+ A+ P+
Sbjct: 3 LLRSKLHLSRTLSFISPLLPKTFSTSATSLLSDHENDESAATITAAVSVPISPLLTPEDT 62
Query: 36 LIAEKFHTAIKDHHRKNP-NPDAAPPSPTLTIPDLALEFSRLSAAHPISPSTARRVIEKC 94
EKFH+ IKDH+RKNP +P+ A +P+LT+ L+L+FS++ + +SPS R VIEKC
Sbjct: 63 QTVEKFHSIIKDHYRKNPTSPNDAILNPSLTLHALSLDFSQIETSQ-VSPSVVRCVIEKC 121
Query: 95 GAIRHGIPFYQSLAFFNWATSLKNFP-SSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRG 153
G++RHGIP +QSLAFFNWATS ++ SP PY EM+DL+GK+R FDLAWHLID MK+R
Sbjct: 122 GSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRN 181
Query: 154 VEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQ 213
VEI+ ETF++LIRRYVRAGLA+EAVH FNRMEDYG PDK+A SIV+S+L RKRRA EAQ
Sbjct: 182 VEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQ 241
Query: 214 SFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLC 273
SFFDS+KDRFEPDVI+YT+L+ GWCRAG+I AE++FK+MK AGI+PNV+TYSIVID+LC
Sbjct: 242 SFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALC 301
Query: 274 RCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTI 333
RCGQI+RAHDVFA+M+D+GC PNA+TFN+LMRVHVKAGRTEKVLQV+NQMK+ C DTI
Sbjct: 302 RCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTI 361
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM 393
YNFLIE HCRDENLE AVKVLN M+KK N+STFN+IF I K DVNGAHRMY+KM
Sbjct: 362 TYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKM 421
Query: 394 KELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHW 453
E C PNT+TYNILMRMF SKS DMVLK+KKEMD+ +VEPNVNTYR+L+ MFC GHW
Sbjct: 422 MEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHW 481
Query: 454 NNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVSRPL 509
NNAYKL KEMVEEK L P+L +YE VL LR+AGQLK HEELVEKM+ +G V+RPL
Sbjct: 482 NNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVARPL 537
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 243/449 (54%), Gaps = 15/449 (3%)
Query: 61 SPTLTIPDLALEFSRLSAAHPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFP 120
SP L + D AL+ S L + + R G+ Y+ FF W+ +++
Sbjct: 82 SPQLVL-DSALDQSGLRVSQEVVEDVLNRFRNA------GLLTYR---FFQWSEKQRHYE 131
Query: 121 SSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHA 180
S Y M++ K+R + L W LI++M+ + + + ETF +++R+Y RA EA++A
Sbjct: 132 HSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYA 190
Query: 181 FNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRA 240
FN ME Y + P+ VA + ++S+LC+ + +AQ F++++DRF PD Y+ L+ GW +
Sbjct: 191 FNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKE 250
Query: 241 GKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTF 300
+ +A E+F++M DAG P++ TYSI++D LC+ G++ A + M + C P +
Sbjct: 251 PNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY 310
Query: 301 NSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVK 360
+ L+ + R E+ + F +M+R AD +N LI C+ ++ +VL M
Sbjct: 311 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKS 370
Query: 361 KGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDM 420
KGV PNS + N I + + + + A ++ KM ++ C P+ TY ++++MF E K ++
Sbjct: 371 KGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMET 429
Query: 421 VLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVL 480
K+ K M + V P+++T+ +LI CE+ A L++EM+ E ++P+ + +
Sbjct: 430 ADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMI-EMGIRPSGVTFGRLR 488
Query: 481 ELLRKAGQLKMHEELVEKMVARGFVSRPL 509
+LL K + + + L EKM V+ PL
Sbjct: 489 QLLIKEEREDVLKFLNEKMNV--LVNEPL 515
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 229/460 (49%), Gaps = 24/460 (5%)
Query: 39 EKFHTAIKDHHRKNPNPDAAPPSPTLTIPDLALEFSRLSAAHPISPSTARRVIEKCGAIR 98
EK + +++HH + P LE + + + P RV+ +CG
Sbjct: 68 EKIYRILRNHHSRVPK----------------LELALNESGIDLRPGLIIRVLSRCGDA- 110
Query: 99 HGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVE-IT 157
G Y+ FF WAT + S E M+ + K+R F W LI+ M+ E I
Sbjct: 111 -GNLGYR---FFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIE 166
Query: 158 AETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFD 217
E F VL+RR+ A + +AV + M YG+ PD+ ++ +LC+ +EA F+
Sbjct: 167 PELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFE 226
Query: 218 SVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQ 277
++++F P++ +TSL++GWCR GK+ A+E+ MK+AG++P++ ++ ++ G+
Sbjct: 227 DMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGK 286
Query: 278 ITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKA-GRTEKVLQVFNQMKRFNCAADTIGYN 336
+ A+D+ +M G PN + L++ + R ++ ++VF +M+R+ C AD + Y
Sbjct: 287 MADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYT 346
Query: 337 FLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKEL 396
LI C+ +++ VL+ M KKGV P+ T+ I K + KMK
Sbjct: 347 ALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRR 406
Query: 397 NCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNA 456
C P+ L YN+++R+ + + ++L EM+ N + P V+T+ I+I F +G A
Sbjct: 407 GCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEA 466
Query: 457 YKLMKEMVEEKSLK-PNLQVYENVLELLRKAGQLKMHEEL 495
KEMV P +++L L + +L+M +++
Sbjct: 467 CNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDV 506
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 126/282 (44%), Gaps = 40/282 (14%)
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
EP+ L+ L+ + A +++A E+ +M G++P+ + + ++D+LC+ G + A
Sbjct: 165 IEPE--LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEAS 222
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
VF +M + PN F SL+ Y +
Sbjct: 223 KVFEDMREK-FPPNLRYFTSLL------------------------------YGW----- 246
Query: 343 CRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
CR+ L EA +VL M + G+ P+ F ++ A + A+ + M++ PN
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV 306
Query: 403 LTYNILMRMFAES-KSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMK 461
Y +L++ + K +D +++ EM+ E ++ TY LI FC+ G + Y ++
Sbjct: 307 NCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD 366
Query: 462 EMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+M +K + P+ Y ++ K Q + EL+EKM RG
Sbjct: 367 DM-RKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG 407
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 219/423 (51%), Gaps = 11/423 (2%)
Query: 78 AAHPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLR 137
A+ +SP+ V++K G+ +L+ F WA + K F + Y +++ GK++
Sbjct: 88 ASVKLSPALIEEVLKKLS--NAGVL---ALSVFKWAENQKGFKHTTSNYNALIESLGKIK 142
Query: 138 HFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVS 197
F L W L+D MK + + ++ ETF+++ RRY RA EA+ AF++ME++G + +
Sbjct: 143 QFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFN 201
Query: 198 IVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDA 256
++ +L + R +AQ FD +K RFEPD+ YT L+ GW + + R +E+ ++MKD
Sbjct: 202 RMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDE 261
Query: 257 GIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKV 316
G +P+V Y I+I++ C+ + A F EM C P+ F SL+ +
Sbjct: 262 GFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDA 321
Query: 317 LQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGC 376
L+ F + K + YN L+ +C + +E+A K ++ M KGV PN+ T++ I
Sbjct: 322 LEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHH 381
Query: 377 IAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPN 436
+ ++ A+ +Y M +C P TY I++RMF + +DM +K+ EM V P
Sbjct: 382 LIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPG 438
Query: 437 VNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELV 496
++ + LI C + + A + EM+ + ++P ++ + + L G+ +LV
Sbjct: 439 MHMFSSLITALCHENKLDEACEYFNEML-DVGIRPPGHMFSRLKQTLLDEGRKDKVTDLV 497
Query: 497 EKM 499
KM
Sbjct: 498 VKM 500
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 3/224 (1%)
Query: 103 FYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFS 162
+ +++ FFN +N SP + +++ G + + A + K+ G + A T++
Sbjct: 283 YEEAIRFFN-EMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYN 341
Query: 163 VLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR 222
L+ Y + +A + M GV P+ I++ L R +R++EA + ++
Sbjct: 342 ALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS-- 399
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
EP V Y ++ +C +++ A +I+ +MK G+ P +H +S +I +LC ++ A
Sbjct: 400 CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEAC 459
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF 326
+ F EM+D G P F+ L + + GR +KV + +M R
Sbjct: 460 EYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRL 503
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 248/489 (50%), Gaps = 40/489 (8%)
Query: 22 TFKLYSS----PASPQHDLIAEKFHTAIKDHHRKNPNPDAAPPSPTLTIPDLALEFSRLS 77
+F+++S+ P SP DL+ E + DH +NP D LE + ++
Sbjct: 21 SFRIFSTLLHDPPSP--DLVNE-ISRVLSDH--RNPKDD--------------LEHTLVA 61
Query: 78 AAHPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLR 137
+ +S + +V+++C + G P ++ FF WA + +F S E Y ++++ G +
Sbjct: 62 YSPRVSSNLVEQVLKRCKNL--GFPAHR---FFLWARRIPDFAHSLESYHILVEILGSSK 116
Query: 138 HFDLAWH-LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
F L W LI++ + EI+++ F ++ R Y RA L +EA AFNRM ++G+ P +
Sbjct: 117 QFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDL 176
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD 255
++ SLC K+ AQ FF K P Y+ L+ GW R A ++F +M +
Sbjct: 177 DQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLE 236
Query: 256 AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEK 315
++ Y+ ++D+LC+ G + + +F EM + G P+A +F + + AG
Sbjct: 237 RNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHS 296
Query: 316 VLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFG 375
+V ++MKR++ + +N +I+ C++E +++A +L+ M++KG P++ T+NSI
Sbjct: 297 AYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMA 356
Query: 376 CIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEP 435
+VN A ++ ++M CLP+ TYN+++++ D ++ + M E + P
Sbjct: 357 YHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYP 416
Query: 436 NVNTYRILI-LMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKA----GQLK 490
V TY ++I + +KG A + + M++E + Y +E+LR GQ+
Sbjct: 417 TVATYTVMIHGLVRKKGKLEEACRYFEMMIDE-----GIPPYSTTVEMLRNRLVGWGQMD 471
Query: 491 MHEELVEKM 499
+ + L KM
Sbjct: 472 VVDVLAGKM 480
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 96/237 (40%), Gaps = 37/237 (15%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y +LD K D + + M G++ A +F++ I Y AG A +RM+
Sbjct: 246 YNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMK 305
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWC------ 238
Y + P+ + ++ +LC+ + ++A D ++ PD Y S++ C
Sbjct: 306 RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVN 365
Query: 239 -----------------------------RAGKIERAEEIFKDMKDAGIKPNVHTYSIVI 269
R G+ +RA EI++ M + P V TY+++I
Sbjct: 366 RATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMI 425
Query: 270 DSLCRC-GQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR 325
L R G++ A F MID G P + T L V G+ + V + +M+R
Sbjct: 426 HGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMER 482
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 201/395 (50%), Gaps = 6/395 (1%)
Query: 71 LEFSRLSAAHPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEML 130
LE + + + P RV+ +CG G Y+ FF WA + S E Y M+
Sbjct: 100 LELALNESGVELRPGLIERVLNRCGDA--GNLGYR---FFVWAAKQPRYCHSIEVYKSMV 154
Query: 131 DLAGKLRHFDLAWHLIDSMKTRGVE-ITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGV 189
+ K+R F W LI+ M+ + I E F VL++R+ A + +A+ + M +G
Sbjct: 155 KILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGF 214
Query: 190 APDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEI 249
PD+ ++ +LC+ ++A F+ ++ RF ++ +TSL++GWCR GK+ A+ +
Sbjct: 215 EPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYV 274
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVK 309
M +AG +P++ Y+ ++ G++ A+D+ +M G PNA + L++ K
Sbjct: 275 LVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCK 334
Query: 310 AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSST 369
R E+ ++VF +M+R+ C AD + Y L+ C+ +++ VL+ M+KKG+ P+ T
Sbjct: 335 VDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELT 394
Query: 370 FNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMD 429
+ I K + KM+++ P+ YN+++R+ + + ++L EM+
Sbjct: 395 YMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEME 454
Query: 430 ENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
EN + P V+T+ I+I +G A KEMV
Sbjct: 455 ENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMV 489
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 202/404 (50%), Gaps = 17/404 (4%)
Query: 59 PPSPTLTIPDLAL----------EFSRLSAAHPISPSTARRVIEKCGAIRHGIPFYQSLA 108
PP+ + I L L +F + P +P+ V+++ HG ++L
Sbjct: 21 PPADSAAIAKLILSSPNTTHQDDQFLLSTKTTPWTPNLVNSVLKRLW--NHGP---KALQ 75
Query: 109 FFNWATSL-KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRR 167
FF++ + + + + +D+A +L W LI M++ + + +TF+++ R
Sbjct: 76 FFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAER 135
Query: 168 YVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDV 227
Y AG +AV F M ++G D + + ++ LC+ +R E+A F +++ RF D
Sbjct: 136 YASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDT 195
Query: 228 ILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAE 287
+ Y +++GWC + +A E+ K+M + GI PN+ TY+ ++ R GQI A + F E
Sbjct: 196 VTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLE 255
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDEN 347
M C + VT+ +++ AG ++ VF++M R YN +I+ C+ +N
Sbjct: 256 MKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDN 315
Query: 348 LEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNI 407
+E AV + MV++G PN +T+N + + + + + +M+ C PN TYN+
Sbjct: 316 VENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNM 375
Query: 408 LMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILIL-MFCEK 450
++R ++E ++ L L ++M PN++TY ILI MF K
Sbjct: 376 MIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRK 419
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 133/252 (52%), Gaps = 4/252 (1%)
Query: 253 MKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGR 312
M+ I P+ T++IV + G+ +A +F M + GC + +FN+++ V K+ R
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 313 TEKVLQVFNQMK-RFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFN 371
EK ++F ++ RF + DT+ YN ++ C + +A++VL MV++G+ PN +T+N
Sbjct: 177 VEKAYELFRALRGRF--SVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYN 234
Query: 372 SIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDEN 431
++ + + A + +MK+ +C + +TY ++ F + I + EM
Sbjct: 235 TMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIRE 294
Query: 432 QVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKM 491
V P+V TY +I + C+K + NA + +EMV + +PN+ Y ++ L AG+
Sbjct: 295 GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR-RGYEPNVTTYNVLIRGLFHAGEFSR 353
Query: 492 HEELVEKMVARG 503
EEL+++M G
Sbjct: 354 GEELMQRMENEG 365
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 4/191 (2%)
Query: 133 AGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPD 192
AG++RH AW MK R EI T++ ++ + AG A + F+ M GV P
Sbjct: 243 AGQIRH---AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 299
Query: 193 KVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFK 251
+ ++ LC+K E A F+ V+ +EP+V Y LI G AG+ R EE+ +
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
Query: 252 DMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAG 311
M++ G +PN TY+++I C ++ +A +F +M C PN T+N L+
Sbjct: 360 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRK 419
Query: 312 RTEKVLQVFNQ 322
R+E ++ NQ
Sbjct: 420 RSEDMVVAGNQ 430
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 200/389 (51%), Gaps = 2/389 (0%)
Query: 116 LKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAA 175
L+ F S + Y ++ GK R D L+ M+T G++ TF++ IR RAG
Sbjct: 216 LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275
Query: 176 EAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLI 234
EA RM+D G PD V ++++ +LC R+ + A+ F+ +K R +PD + Y +L+
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 235 HGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCN 294
+ ++ ++ + +M+ G P+V T++I++D+LC+ G A D M D G
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Query: 295 PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKV 354
PN T+N+L+ ++ R + L++F M+ Y I+ + + + A++
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
M KG+APN N+ +AK A +++ +K++ +P+++TYN++M+ +++
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 415 SKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQ 474
ID +KL EM EN EP+V LI + + A+K+ M E K LKP +
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK-LKPTVV 574
Query: 475 VYENVLELLRKAGQLKMHEELVEKMVARG 503
Y +L L K G+++ EL E MV +G
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 197/450 (43%), Gaps = 80/450 (17%)
Query: 133 AGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPD 192
AG+ R A + +K G+ + T++++++ Y + G EA+ + M + G PD
Sbjct: 481 AGRDRE---AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 193 KVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFK 251
+ V+ ++++L + R +EA F +K+ + +P V+ Y +L+ G + GKI+ A E+F+
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Query: 252 DMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNA-------------- 297
M G PN T++ + D LC+ ++T A + +M+D GC P+
Sbjct: 598 GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNG 657
Query: 298 --------------------VTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCA-------- 329
VT +L+ VKA E ++ +NCA
Sbjct: 658 QVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF-LYNCADQPANLFW 716
Query: 330 ADTIGYNF------------------------------LIECHCRDENLEEAVKVLNLMV 359
D IG +I C+ N+ A +
Sbjct: 717 EDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFT 776
Query: 360 KK-GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSI 418
K GV P T+N + G + + + A ++ ++K C+P+ TYN L+ + +S I
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 419 DMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYEN 478
D + +L KEM ++ E N T+ I+I + G+ ++A L +++ ++ P Y
Sbjct: 837 DELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896
Query: 479 VLELLRKAGQLKMHEELVEKMVARGFVSRP 508
+++ L K+G+L ++L E M+ G RP
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYG--CRP 924
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 177/380 (46%), Gaps = 5/380 (1%)
Query: 127 IEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMED 186
+E L + GKL ++ D M+ R ++ T+ + + G +A +A +M +
Sbjct: 125 LEALRVDGKLEEM---AYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 187 YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIER 245
+G + + + ++ L + R EA + + + F P + Y+SL+ G + I+
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 246 AEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMR 305
+ K+M+ G+KPNV+T++I I L R G+I A+++ M D GC P+ VT+ L+
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 306 VHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
A + + +VF +MK D + Y L++ + +L+ + + M K G P
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLK 425
+ TF + + K + A M++ LPN TYN L+ +D L+L
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 426 KEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRK 485
M+ V+P TY + I + + G +A + ++M + K + PN+ L L K
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM-KTKGIAPNIVACNASLYSLAK 480
Query: 486 AGQLKMHEELVEKMVARGFV 505
AG+ + +++ + G V
Sbjct: 481 AGRDREAKQIFYGLKDIGLV 500
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 147/307 (47%), Gaps = 3/307 (0%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
++A + +K+ G T++ L+ Y ++G E + M + + + +IV
Sbjct: 802 EIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIV 861
Query: 200 VSSLCRKRRAEEAQS-FFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAG 257
+S L + ++A ++D + DR F P Y LI G ++G++ A+++F+ M D G
Sbjct: 862 ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 258 IKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVL 317
+PN Y+I+I+ + G+ A +F M+ G P+ T++ L+ GR ++ L
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981
Query: 318 QVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLM-VKKGVAPNSSTFNSIFGC 376
F ++K D + YN +I + LEEA+ + N M +G+ P+ T+NS+
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILN 1041
Query: 377 IAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPN 436
+ V A ++Y +++ PN T+N L+R ++ S + + + M PN
Sbjct: 1042 LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Query: 437 VNTYRIL 443
TY L
Sbjct: 1102 TGTYEQL 1108
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 156/323 (48%), Gaps = 4/323 (1%)
Query: 185 EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKI 243
+D GV P ++++ L E AQ F VK PDV Y L+ + ++GKI
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMI-DAGCNPNAVTFNS 302
+ E++K+M + N T++IVI L + G + A D++ +++ D +P A T+
Sbjct: 837 DELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896
Query: 303 LMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKG 362
L+ K+GR + Q+F M + C + YN LI + + A + MVK+G
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 363 VAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVL 422
V P+ T++ + C+ + V+ + ++KE P+ + YN+++ +S ++ L
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 423 KLKKEMDENQ-VEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
L EM ++ + P++ TY LIL G A K+ E ++ L+PN+ + ++
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNE-IQRAGLEPNVFTFNALIR 1075
Query: 482 LLRKAGQLKMHEELVEKMVARGF 504
+G+ + + + MV GF
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGF 1098
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 139/283 (49%), Gaps = 3/283 (1%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAF-NRMEDY 187
+LD GK D + L M T E T +++I V+AG +A+ + + M D
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 188 GVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERA 246
+P ++ L + R EA+ F+ + D P+ +Y LI+G+ +AG+ + A
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 247 EEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRV 306
+FK M G++P++ TYS+++D LC G++ F E+ ++G NP+ V +N ++
Sbjct: 946 CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING 1005
Query: 307 HVKAGRTEKVLQVFNQMKRF-NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
K+ R E+ L +FN+MK D YN LI +EEA K+ N + + G+ P
Sbjct: 1006 LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNIL 408
N TFN++ + A+ +Y M PNT TY L
Sbjct: 1066 NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 189/454 (41%), Gaps = 78/454 (17%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y +L GK A L + M +G TF+ L + A+ +M
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIER 245
D G PD + ++ L + + +EA FF +K PD + +L+ G +A IE
Sbjct: 636 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIED 695
Query: 246 AEEIFKD---------------------MKDAGIKPNVHTYS--IVIDSLCRCG------ 276
A +I + + +AGI N ++S +V + +CR G
Sbjct: 696 AYKIITNFLYNCADQPANLFWEDLIGSILAEAGID-NAVSFSERLVANGICRDGDSILVP 754
Query: 277 ---------QITRAHDVF-------------------------AEMID-----------A 291
++ A +F A+MI+
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 292 GCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEA 351
GC P+ T+N L+ + K+G+ +++ +++ +M C A+TI +N +I + N+++A
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 352 VKV-LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMR 410
+ + +LM + +P + T+ + ++K + A +++ M + C PN YNIL+
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 411 MFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLK 470
F ++ D L K M + V P++ TY +L+ C G + KE+ +E L
Sbjct: 935 GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL-KESGLN 993
Query: 471 PNLQVYENVLELLRKAGQLKMHEELVEKM-VARG 503
P++ Y ++ L K+ +L+ L +M +RG
Sbjct: 994 PDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRG 1027
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 8/247 (3%)
Query: 79 AHPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRH 138
A+ I+ + + K G + + Y L S ++F + Y ++D K
Sbjct: 853 ANTITHNIVISGLVKAGNVDDALDLYYDL------MSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 139 FDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSI 198
A L + M G +++LI + +AG A A F RM GV PD S+
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 199 VVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDA- 256
+V LC R +E +F +K+ PDV+ Y +I+G ++ ++E A +F +MK +
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026
Query: 257 GIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKV 316
GI P+++TY+ +I +L G + A ++ E+ AG PN TFN+L+R + +G+ E
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1086
Query: 317 LQVFNQM 323
V+ M
Sbjct: 1087 YAVYQTM 1093
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 194/359 (54%), Gaps = 9/359 (2%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
AW L G E TFS L+ + G +EAV +RM + PD V VS +++
Sbjct: 131 AWKL-------GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 202 SLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC K R EA D V+ F+PD + Y +++ C++G A ++F+ M++ IK
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+V YSIVIDSLC+ G A +F EM G + VT++SL+ G+ + ++
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+M N D + ++ LI+ ++ L EA ++ N M+ +G+AP++ T+NS+ K
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
+ ++ A++M+ M C P+ +TY+IL+ + ++K +D ++L +E+ + PN TY
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
L+L FC+ G N A +L +EMV + + P++ Y +L+ L G+L E+ EKM
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMV-SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 181/383 (47%), Gaps = 3/383 (0%)
Query: 69 LALEFSRLSAAHPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIE 128
LAL+ R I S + I + G F +L+ FN +K + Y
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDG-SFDDALSLFN-EMEMKGIKADVVTYSS 285
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
++ +D ++ M R + TFS LI +V+ G EA +N M G
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFD-SVKDRFEPDVILYTSLIHGWCRAGKIERAE 247
+APD + + ++ C++ EA FD V EPD++ Y+ LI+ +C+A +++
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
+F+++ G+ PN TY+ ++ C+ G++ A ++F EM+ G P+ VT+ L+
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
G K L++F +M++ YN +I C +++A + + KGV P+
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 525
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKE 427
T+N + G + K ++ A ++ KMKE C P+ TYNIL+R + ++L +E
Sbjct: 526 VTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEE 585
Query: 428 MDENQVEPNVNTYRILILMFCEK 450
M + +T +++I M ++
Sbjct: 586 MKVCGFSADSSTIKMVIDMLSDR 608
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 179/365 (49%), Gaps = 2/365 (0%)
Query: 141 LAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVV 200
LA L M+ R ++ + +S++I + G +A+ FN ME G+ D V S ++
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 201 SSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIK 259
LC + ++ + R PDV+ +++LI + + GK+ A+E++ +M GI
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 260 PNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV 319
P+ TY+ +ID C+ + A+ +F M+ GC P+ VT++ L+ + KA R + +++
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 320 FNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAK 379
F ++ +TI YN L+ C+ L A ++ MV +GV P+ T+ + +
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 380 LHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNT 439
++N A ++ KM++ YNI++ + +D L + + V+P+V T
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 440 YRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
Y ++I C+KG + A L ++M +E P+ Y ++ L EL+E+M
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKM-KEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Query: 500 VARGF 504
GF
Sbjct: 587 KVCGF 591
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 146/298 (48%), Gaps = 2/298 (0%)
Query: 208 RAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYS 266
+ +A F+S ++ R P I + L R + + K M+ GI+ +++T +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 267 IVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF 326
I+I+ CR ++ A V G P+ +TF++L+ GR + + + ++M
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 327 NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGA 386
D + + LI C + EA+ +++ MV+ G P+ T+ + + K + A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 387 HRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILM 446
++ KM+E N + + Y+I++ + S D L L EM+ ++ +V TY LI
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 447 FCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
C G W++ K+++EM+ +++ P++ + ++++ K G+L +EL +M+ RG
Sbjct: 290 LCNDGKWDDGAKMLREMI-GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 189/369 (51%), Gaps = 2/369 (0%)
Query: 138 HFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVS 197
LA ++ M G E T L+ + R ++AV ++M + G PD VA +
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194
Query: 198 IVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDA 256
++ SLC+ +R +A FF ++ + P+V+ YT+L++G C + + A + DM
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254
Query: 257 GIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKV 316
I PNV TYS ++D+ + G++ A ++F EM+ +P+ VT++SL+ R ++
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 317 LQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGC 376
Q+F+ M C AD + YN LI C+ + +E+ +K+ M ++G+ N+ T+N++
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 377 IAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPN 436
+ DV+ A +++M P+ TYNIL+ ++ ++ L + ++M + +++ +
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Query: 437 VNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELV 496
+ TY +I C+ G A+ L + K LKP++ Y ++ L G L E L
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSL-SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 497 EKMVARGFV 505
KM G +
Sbjct: 494 TKMKQEGLM 502
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 208/405 (51%), Gaps = 3/405 (0%)
Query: 101 IPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAET 160
I ++ F+ + FPS + + +L KL+ +D+ L M+ G+ T
Sbjct: 64 IKLNDAIDLFSDMVKSRPFPSIVD-FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 161 FSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-V 219
F+++I + + A+ +M G PD+V + +V+ CR+ R +A S D V
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 220 KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQIT 279
+ ++PD++ Y ++I C+ ++ A + FK+++ GI+PNV TY+ +++ LC + +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
A + ++MI PN +T+++L+ VK G+ + ++F +M R + D + Y+ LI
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
C + ++EA ++ +LMV KG + ++N++ K V +++ +M + +
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 400 PNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKL 459
NT+TYN L++ F ++ +D + +MD + P++ TY IL+ C+ G A +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 460 MKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
++M +++ + ++ Y V+ + K G+++ L + +G
Sbjct: 423 FEDM-QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 51/222 (22%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDK- 193
K + + L M RG+ T++ LI+ + +AG +A F++M+ +G++PD
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401
Query: 194 ----------------------------------VAVSIVVSSLCRKRRAEEAQSFFDSV 219
V + V+ +C+ + EEA S F S+
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461
Query: 220 KDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
+ +PD++ YT+++ G C G + E ++ MK G+ N T S G I
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD--------GDI 513
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
T + ++ +M+ G P SL++ +K+G +K L +
Sbjct: 514 TLSAELIKKMLSCGYAP------SLLK-DIKSGVCKKALSLL 548
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
RD L +A+ + + MVK P+ FN + I KL + + KM+ L +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
T+NI++ F + + L + +M + EP+ T L+ FC + ++A L+ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 464 VEEKSLKPNLQVYENVLELLRKA 486
V E KP++ Y +++ L K
Sbjct: 182 V-EIGYKPDIVAYNAIIDSLCKT 203
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 192/363 (52%), Gaps = 2/363 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+D M G + TF+ LI A+EA+ +RM G PD V +VV+
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 202 SLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC++ + A + + + + + EP V++Y ++I G C+ ++ A +FK+M+ GI+P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
NV TYS +I LC G+ + A + ++MI+ NP+ TF++L+ VK G+ + +++
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
++M + + + Y+ LI C + L+EA ++ MV K P+ T+N++ K
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
V ++ +M + + NT+TYNIL++ ++ DM ++ KEM + V PN+ TY
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
L+ C+ G A + E ++ ++P + Y ++E + KAG+++ +L +
Sbjct: 470 NTLLDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 501 ARG 503
+G
Sbjct: 529 LKG 531
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 186/368 (50%), Gaps = 2/368 (0%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
DLA++L++ M+ +E ++ +I + +A++ F ME G+ P+ V S +
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 200 VSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI 258
+S LC R +A D ++ + PDV +++LI + + GK+ AE+++ +M I
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 259 KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
P++ TYS +I+ C ++ A +F M+ C P+ VT+N+L++ K R E+ ++
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 319 VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
VF +M + +T+ YN LI+ + + + A ++ MV GV PN T+N++ +
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 379 KLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVN 438
K + A ++ ++ P TYNI++ ++ ++ L + V+P+V
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Query: 439 TYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEK 498
Y +I FC KG A L KEM E+ +L PN Y ++ + G + EL+++
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTL-PNSGCYNTLIRARLRDGDREASAELIKE 596
Query: 499 MVARGFVS 506
M + GF
Sbjct: 597 MRSCGFAG 604
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 148/288 (51%), Gaps = 1/288 (0%)
Query: 215 FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
F + VK R P +I ++ L+ + K + + + M++ GI N +TYSI+I+ CR
Sbjct: 69 FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR 128
Query: 275 CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIG 334
Q+ A V +M+ G PN VT +SL+ + + R + + + +QM +T+
Sbjct: 129 RSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT 188
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMK 394
+N LI EA+ +++ MV KG P+ T+ + + K D + A + KM+
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248
Query: 395 ELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWN 454
+ P L YN ++ + K +D L L KEM+ + PNV TY LI C G W+
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308
Query: 455 NAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
+A +L+ +M+E K + P++ + +++ K G+L E+L ++MV R
Sbjct: 309 DASRLLSDMIERK-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 200/426 (46%), Gaps = 9/426 (2%)
Query: 85 STARRVIEKCGAIR-HGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAG--KLRHFDL 141
STA+R + + +R + S +FF W + + Y E L G +L+ D
Sbjct: 9 STAKRFVHRSLVVRGNAATVSPSFSFF-WRRAFSG--KTSYDYREKLSRNGLSELKLDDA 65
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
+ +K+R E FS L+ + + +M++ G+ + SI+++
Sbjct: 66 VALFGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 202 SLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
CR+ + A + + K +EP+++ +SL++G+C + +I A + M G +P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
N T++ +I L + + A + M+ GC P+ VT+ ++ K G T+ +
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
N+M++ + YN +I+ C+ +++++A+ + M KG+ PN T++S+ C+
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
+ A R+ + M E P+ T++ L+ F + + KL EM + ++P++ TY
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
LI FC + A ++ + MV + P++ Y +++ K +++ E+ +M
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 501 ARGFVS 506
RG V
Sbjct: 424 QRGLVG 429
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 125/276 (45%), Gaps = 1/276 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L D M R ++ + T+S LI + EA F M PD V + ++
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
C+ +R EE F + R + + Y LI G +AG + A+EIFK+M G+ P
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
N+ TY+ ++D LC+ G++ +A VF + + P T+N ++ KAG+ E +F
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ D + YN +I CR + EEA + M + G PNS +N++ +
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESK 416
D + + +M+ + T ++ M + +
Sbjct: 585 GDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 620
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 3/203 (1%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV 194
K + + + M RG+ T+++LI+ +AG A F M GV P+ +
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
+ ++ LC+ + E+A F+ + + + EP + Y +I G C+AGK+E ++F ++
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRT 313
G+KP+V Y+ +I CR G A +F EM + G PN+ +N+L+R ++ G
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587
Query: 314 EKVLQVFNQMKRFNCAAD--TIG 334
E ++ +M+ A D TIG
Sbjct: 588 EASAELIKEMRSCGFAGDASTIG 610
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
Query: 120 PSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVH 179
P + Y +LD K + A + + ++ +E T T++++I +AG +
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 180 AFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWC 238
F + GV PD VA + ++S CRK EEA + F +K D P+ Y +LI
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 239 RAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSL 272
R G E + E+ K+M+ G + T +V + L
Sbjct: 583 RDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 191/376 (50%), Gaps = 5/376 (1%)
Query: 133 AGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPD 192
+GKL+ A ++D M R T+++LI R A+ + M D G PD
Sbjct: 217 SGKLKQ---AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273
Query: 193 KVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFK 251
V +++V+ +C++ R +EA F + + +P+VI + ++ C G+ AE++
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 252 DMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAG 311
DM G P+V T++I+I+ LCR G + RA D+ +M GC PN++++N L+ K
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 312 RTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFN 371
+ ++ ++ +M C D + YN ++ C+D +E+AV++LN + KG +P T+N
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 372 SIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDEN 431
++ +AK A ++ +M+ + P+T+TY+ L+ + +D +K E +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 432 QVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKM 491
+ PN T+ ++L C+ + A + M+ + KPN Y ++E L G K
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI-NRGCKPNETSYTILIEGLAYEGMAKE 572
Query: 492 HEELVEKMVARGFVSR 507
EL+ ++ +G + +
Sbjct: 573 ALELLNELCNKGLMKK 588
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 172/341 (50%), Gaps = 3/341 (0%)
Query: 162 SVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD 221
+ LIR + R G +A +E G PD + ++++S C+ A S D +
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS- 199
Query: 222 RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRA 281
PDV+ Y +++ C +GK+++A E+ M P+V TY+I+I++ CR + A
Sbjct: 200 -VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 282 HDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIEC 341
+ EM D GC P+ VT+N L+ K GR ++ ++ N M C + I +N ++
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 342 HCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPN 401
C +A K+L M++KG +P+ TFN + + + + A + KM + C PN
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 402 TLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMK 461
+L+YN L+ F + K +D ++ + M P++ TY ++ C+ G +A +++
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 462 EMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
++ K P L Y V++ L KAG+ +L+++M A+
Sbjct: 439 QL-SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 175/345 (50%), Gaps = 2/345 (0%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV 219
T++ ++R +G +A+ +RM PD + +I++ + CR A D +
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 220 KDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
+DR PDV+ Y L++G C+ G+++ A + DM +G +PNV T++I++ S+C G+
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
A + A+M+ G +P+ VTFN L+ + G + + + +M + C +++ YN L
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNC 398
+ C+++ ++ A++ L MV +G P+ T+N++ + K V A + ++ C
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 399 LPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYK 458
P +TYN ++ A++ +KL EM ++P+ TY L+ +G + A K
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 459 LMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
E E ++PN + +++ L K+ Q + + M+ RG
Sbjct: 506 FFHEF-ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG 549
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 149/279 (53%), Gaps = 4/279 (1%)
Query: 225 PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDV 284
PD+I T+LI G+CR GK +A +I + ++ +G P+V TY+++I C+ G+I A V
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 285 FAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
M +P+ VT+N+++R +G+ ++ ++V ++M + +C D I Y LIE CR
Sbjct: 195 LDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
D + A+K+L+ M +G P+ T+N + I K ++ A + M C PN +T
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
+NI++R + KL +M P+V T+ ILI C KG A ++++M
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM- 370
Query: 465 EEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+ +PN Y +L K ++ E +E+MV+RG
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 143/292 (48%), Gaps = 4/292 (1%)
Query: 212 AQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDS 271
+ SV F + + + + R G++E + ++M G P++ + +I
Sbjct: 87 GNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRG 146
Query: 272 LCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
CR G+ +A + + +G P+ +T+N ++ + KAG L V ++M + + D
Sbjct: 147 FCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPD 203
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA 391
+ YN ++ C L++A++VL+ M+++ P+ T+ + + V A ++
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 392 KMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
+M++ C P+ +TYN+L+ + +D +K +M + +PNV T+ I++ C G
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 452 HWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
W +A KL+ +M+ K P++ + ++ L + G L +++EKM G
Sbjct: 324 RWMDAEKLLADML-RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 114/228 (50%), Gaps = 1/228 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A +++ M G + + +++ L+ + + A+ RM G PD V + +++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
+LC+ + E+A + + + P +I Y ++I G +AGK +A ++ +M+ +KP
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+ TYS ++ L R G++ A F E G PNAVTFNS+M K+ +T++ +
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSS 368
M C + Y LIE + +EA+++LN + KG+ SS
Sbjct: 543 VFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 1/168 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ML K + A +++ + ++G T++ +I +AG +A+ + M
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIE 244
+ PD + S +V L R+ + +EA FF + P+ + + S++ G C++ + +
Sbjct: 477 AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTD 536
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAG 292
RA + M + G KPN +Y+I+I+ L G A ++ E+ + G
Sbjct: 537 RAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D K A L+D M+ + ++ T+S L+ R G EA+ F+ E
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIE 244
G+ P+ V + ++ LC+ R+ + A F + +R +P+ YT LI G G +
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571
Query: 245 RAEEIFKDMKDAGI 258
A E+ ++ + G+
Sbjct: 572 EALELLNELCNKGL 585
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 200/380 (52%), Gaps = 3/380 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y +M++ KL + + A + + G++ T++ LI Y + A FN M
Sbjct: 221 YNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMP 280
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIE 244
G ++VA + ++ LC RR +EA F +K D P V YT LI C + +
Sbjct: 281 LKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKS 340
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A + K+M++ GIKPN+HTY+++IDSLC + +A ++ +M++ G PN +T+N+L+
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
+ K G E + V M+ + +T YN LI+ +C+ N+ +A+ VLN M+++ V
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVL 459
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
P+ T+NS+ + + + A+R+ + M + +P+ TY ++ +SK ++ L
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
+++ V PNV Y LI +C+ G + A+ ++++M+ + L PN + ++ L
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL-PNSLTFNALIHGLC 578
Query: 485 KAGQLKMHEELVEKMVARGF 504
G+LK L EKMV G
Sbjct: 579 ADGKLKEATLLEEKMVKIGL 598
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 189/368 (51%), Gaps = 3/368 (0%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
R D A L MK T T++VLI+ + +EA++ ME+ G+ P+
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD 255
++++ SLC + + E+A+ + ++ P+VI Y +LI+G+C+ G IE A ++ + M+
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 256 AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEK 315
+ PN TY+ +I C+ + +A V +M++ P+ VT+NSL+ ++G +
Sbjct: 422 RKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 316 VLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFG 375
++ + M D Y +I+ C+ + +EEA + + + +KGV PN + ++
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 376 CIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEP 435
K V+ AH M KM NCLPN+LT+N L+ + L+++M + ++P
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 436 NVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEEL 495
V+T ILI + G +++AY ++M+ + KP+ Y ++ + G+L E++
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT-KPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 496 VEKMVARG 503
+ KM G
Sbjct: 660 MAKMRENG 667
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 182/384 (47%), Gaps = 25/384 (6%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A +++ M R V T++ LI R+G A + M D G+ PD+ + ++
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID 505
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
SLC+ +R EEA FDS++ + P+V++YT+LI G+C+AGK++ A + + M P
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP 565
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
N T++ +I LC G++ A + +M+ G P T L+ +K G + F
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRF 625
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
QM D Y I+ +CR+ L +A ++ M + GV+P+ T++S+ L
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDL 685
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESK------------------SIDMVL 422
N A + +M++ C P+ T+ L++ E K D V+
Sbjct: 686 GQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV 745
Query: 423 KLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLEL 482
+L ++M E+ V PN +Y LIL CE G+ A K+ M + + P+ V+ L
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFN---AL 802
Query: 483 LRKAGQLKMHEE---LVEKMVARG 503
L +LK H E +V+ M+ G
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVG 826
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 188/395 (47%), Gaps = 23/395 (5%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D F+ A L+ M +G+ T++ LI Y + G+ +AV ME
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIE 244
++P+ + ++ C K +A + + +R PDV+ Y SLI G CR+G +
Sbjct: 421 SRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A + M D G+ P+ TY+ +IDSLC+ ++ A D+F + G NPN V + +L+
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
+ KAG+ ++ + +M NC +++ +N LI C D L+EA + MVK G+
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
P ST + + K D + A+ + +M P+ TY ++ + + +
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVE---EKSLKPNLQVYENVLE 481
+M EN V P++ TY LI + + G N A+ ++K M + E S L + +++LE
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Query: 482 LLRKAGQLKMHE----------------ELVEKMV 500
+ K G+ K E EL+EKMV
Sbjct: 720 M--KYGKQKGSEPELCAMSNMMEFDTVVELLEKMV 752
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 187/375 (49%), Gaps = 10/375 (2%)
Query: 143 WHLIDSMKTRGVEITAE-------TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVA 195
+ L+D MK +E+ + T++ ++ Y + G EA +++ + G+ PD
Sbjct: 196 FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFT 255
Query: 196 VSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMK 254
+ ++ C+++ + A F+ + + + + YT LIHG C A +I+ A ++F MK
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315
Query: 255 DAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTE 314
D P V TY+++I SLC + + A ++ EM + G PN T+ L+ + E
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375
Query: 315 KVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIF 374
K ++ QM + I YN LI +C+ +E+AV V+ LM + ++PN+ T+N +
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Query: 375 GCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVE 434
K +V+ A + KM E LP+ +TYN L+ S + D +L M++ +
Sbjct: 436 KGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 435 PNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEE 494
P+ TY +I C+ A L + E+K + PN+ +Y +++ KAG++
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSL-EQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 495 LVEKMVARGFVSRPL 509
++EKM+++ + L
Sbjct: 554 MLEKMLSKNCLPNSL 568
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 185/379 (48%), Gaps = 17/379 (4%)
Query: 129 MLDLAGKL---RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
+LDL K+ F+L + LI ++ L+ R GL E + M
Sbjct: 162 VLDLCRKMNKDERFELKYKLI-----------IGCYNTLLNSLARFGLVDEMKQVYMEML 210
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIE 244
+ V P+ + +V+ C+ EEA + V+ +PD YTSLI G+C+ ++
Sbjct: 211 EDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 270
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A ++F +M G + N Y+ +I LC +I A D+F +M D C P T+ L+
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
+ + R + L + +M+ + Y LI+ C E+A ++L M++KG+
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM 390
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
PN T+N++ K + A + M+ PNT TYN L++ + +S ++ + +
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGV 449
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
+M E +V P+V TY LI C G++++AY+L+ ++ ++ L P+ Y ++++ L
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL-SLMNDRGLVPDQWTYTSMIDSLC 508
Query: 485 KAGQLKMHEELVEKMVARG 503
K+ +++ +L + + +G
Sbjct: 509 KSKRVEEACDLFDSLEQKG 527
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 148/315 (46%), Gaps = 50/315 (15%)
Query: 192 DKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVIL----YTSLIHGWCRAGKIERAE 247
D V ++ V LCRK +E RFE L Y +L++ R G ++ +
Sbjct: 154 DSVGDALYVLDLCRKMNKDE----------RFELKYKLIIGCYNTLLNSLARFGLVDEMK 203
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
+++ +M + + PN++TY+ +++ C+ G + A+ +++++AG +P+ T+ SL+ +
Sbjct: 204 QVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGY 263
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
+ + +VFN+M C + + Y LI C ++EA+
Sbjct: 264 CQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMD-------------- 309
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKE 427
++ KMK+ C P TY +L++ S+ L L KE
Sbjct: 310 ---------------------LFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKE 348
Query: 428 MDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
M+E ++PN++TY +LI C + + A +L+ +M+ EK L PN+ Y ++ K G
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML-EKGLMPNVITYNALINGYCKRG 407
Query: 488 QLKMHEELVEKMVAR 502
++ ++VE M +R
Sbjct: 408 MIEDAVDVVELMESR 422
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 142/339 (41%), Gaps = 55/339 (16%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y M+D K + + A L DS++ +GV ++ LI Y +AG EA +M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSF----------------------------FD 217
P+ + + ++ LC + +EA FD
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 218 SVKDRFE--------PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVI 269
RF+ PD YT+ I +CR G++ AE++ M++ G+ P++ TYS +I
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 270 DSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMR--VHVKAGRT-------------- 313
GQ A DV M D GC P+ TF SL++ + +K G+
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 739
Query: 314 --EKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVK-KGVAPNSSTF 370
+ V+++ +M + + Y LI C NL A KV + M + +G++P+ F
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILM 409
N++ C KL N A ++ M + LP + +L+
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 20/250 (8%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A ++ M+ GV T+S LI+ Y G A RM D G P + ++
Sbjct: 656 AEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
Query: 202 SLCRKRRAEEAQSF-----------FDSVKDRFE--------PDVILYTSLIHGWCRAGK 242
L + ++ S FD+V + E P+ Y LI G C G
Sbjct: 716 HLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGN 775
Query: 243 IERAEEIFKDM-KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFN 301
+ AE++F M ++ GI P+ ++ ++ C+ + A V +MI G P +
Sbjct: 776 LRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCK 835
Query: 302 SLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKK 361
L+ K G E+ VF + + D + + +I+ + +E ++ N+M K
Sbjct: 836 VLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKN 895
Query: 362 GVAPNSSTFN 371
G +S T++
Sbjct: 896 GCKFSSQTYS 905
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 96/235 (40%), Gaps = 20/235 (8%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE--------- 176
Y ++ G L + A+ ++ M+ G E + TF LI+ + +
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCA 734
Query: 177 ---------AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK--DRFEP 225
V +M ++ V P+ + ++ +C A+ FD ++ + P
Sbjct: 735 MSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISP 794
Query: 226 DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVF 285
+++ +L+ C+ K A ++ DM G P + + ++I L + G+ R VF
Sbjct: 795 SELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVF 854
Query: 286 AEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIE 340
++ G + + + ++ K G E ++FN M++ C + Y+ LIE
Sbjct: 855 QNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 189/391 (48%), Gaps = 7/391 (1%)
Query: 116 LKNFPSSP--EPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGL 173
+K F P + Y +LD + + + MK G E T++VL++ +
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 174 AAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSL 233
A M + G PD V+ + V+SS+C +E + + +RFEP V +Y +L
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE----LAERFEPVVSVYNAL 252
Query: 234 IHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGC 293
I+G C+ + A E+ ++M + GI PNV +YS +I+ LC GQI A +M+ GC
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 294 NPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR-FNCAADTIGYNFLIECHCRDENLEEAV 352
+PN T +SL++ G T L ++NQM R F + + YN L++ C N+ +AV
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372
Query: 353 KVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMF 412
V + M + G +PN T+ S+ AK ++GA ++ KM C PN + Y ++
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEAL 432
Query: 413 AESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPN 472
L + M + P+V T+ I C+ G + A K+ ++M ++ PN
Sbjct: 433 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPN 492
Query: 473 LQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+ Y +L+ L KA +++ L ++ RG
Sbjct: 493 IVTYNELLDGLAKANRIEEAYGLTREIFMRG 523
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 162/322 (50%), Gaps = 11/322 (3%)
Query: 158 AETFSVLIRRY--VRAGLAAE-----AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAE 210
AE F ++ Y + GL E A M + G++P+ ++ S +++ LC + E
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 211 EAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDM-KDAGIKPNVHTYSIV 268
A SF + R P++ +SL+ G G A +++ M + G++PNV Y+ +
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358
Query: 269 IDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNC 328
+ C G I +A VF+ M + GC+PN T+ SL+ K G + + ++N+M C
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGC 418
Query: 329 AADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHR 388
+ + Y ++E CR +EA ++ +M K+ AP+ TFN+ + ++ A +
Sbjct: 419 CPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK 478
Query: 389 MYAKMKELN-CLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMF 447
++ +M++ + C PN +TYN L+ A++ I+ L +E+ VE + +TY L+
Sbjct: 479 VFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGS 538
Query: 448 CEKGHWNNAYKLM-KEMVEEKS 468
C G A +L+ K MV+ KS
Sbjct: 539 CNAGLPGIALQLVGKMMVDGKS 560
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 123/240 (51%), Gaps = 6/240 (2%)
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
T+ ++I L GQ+ + +M G + + F S++ V+ + G E+ +++F ++
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDV 383
K F C YN +++ + ++ V M + G PN T+N + + K + V
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL 443
+GA ++ +M C P+ ++Y ++ E ++K +E+ E + EP V+ Y L
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG----LVKEGRELAE-RFEPVVSVYNAL 252
Query: 444 ILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
I C++ + A++LM+EMV EK + PN+ Y ++ +L +GQ+++ + +M+ RG
Sbjct: 253 INGLCKEHDYKGAFELMREMV-EKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 91/170 (53%), Gaps = 4/170 (2%)
Query: 120 PSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVH 179
P + Y E+LD K + A+ L + RGVE ++ T++ L+ AGL A+
Sbjct: 490 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQ 549
Query: 180 AFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV---KDRFEPDVILYTSLIHG 236
+M G +PD++ +++++ + C++ +AE A D V + ++ PDVI YT++I G
Sbjct: 550 LVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWG 609
Query: 237 WCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFA 286
CR+ E + + M AGI P++ T+S++I+ I RAHD F
Sbjct: 610 LCRSNCREDGVILLERMISAGIVPSIATWSVLINCFIL-DDIVRAHDQFT 658
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 134/321 (41%), Gaps = 42/321 (13%)
Query: 112 WATSLKNFPSSPEPYIEMLDLAGKLRHFDL--AWHLIDSMKTRGVEITAETFSVLIRRYV 169
W ++ F P + G H ++ A + M+ G T+ LI +
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 170 RAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV---------- 219
+ G AV+ +N+M G P+ V + +V +LCR + +EA+S + +
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458
Query: 220 ---------------------------KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKD 252
+ R P+++ Y L+ G +A +IE A + ++
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518
Query: 253 MKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGR 312
+ G++ + TY+ ++ C G A + +M+ G +P+ +T N ++ + K G+
Sbjct: 519 IFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGK 578
Query: 313 TEKVLQVFNQMK--RFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
E+ Q+ + + R D I Y +I CR E+ V +L M+ G+ P+ +T+
Sbjct: 579 AERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATW 638
Query: 371 NSIFGCIAKLHDVNGAHRMYA 391
+ + C L D+ AH +
Sbjct: 639 SVLINCFI-LDDIVRAHDQFT 658
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 128/302 (42%), Gaps = 32/302 (10%)
Query: 212 AQSFFDSVKDR--FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVI 269
A FF S+ + F+ + + +I G+++ + + + MK G + + VI
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 270 DSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCA 329
+ G RA ++F + + GC+P+ +N ++ + R + + V+ MKR
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 330 ADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS---------------------- 367
+ YN L++ C++ ++ A K+L M KG P++
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Query: 368 --------STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSID 419
S +N++ + K HD GA + +M E PN ++Y+ L+ + S I+
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 420 MVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENV 479
+ +M + PN+ T L+ +G +A L +M+ L+PN+ Y +
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358
Query: 480 LE 481
++
Sbjct: 359 VQ 360
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 197/383 (51%), Gaps = 20/383 (5%)
Query: 139 FDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSI 198
DLA M GV + S R AG +A M G PD S
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488
Query: 199 VVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAG 257
V++ LC + E A F+ +K DV YT ++ +C+AG IE+A + F +M++ G
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 258 IKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVL 317
PNV TY+ +I + + +++ A+++F M+ GC PN VT+++L+ H KAG+ EK
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 318 QVFNQM-------------KRFNCAAD---TIGYNFLIECHCRDENLEEAVKVLNLMVKK 361
Q+F +M K+++ ++ + Y L++ C+ +EEA K+L+ M +
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Query: 362 GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL-TYNILMRMFAESKSIDM 420
G PN ++++ + K+ ++ A + +M E + P TL TY+ L+ + + K D+
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE-HGFPATLYTYSSLIDRYFKVKRQDL 727
Query: 421 VLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVL 480
K+ +M EN PNV Y +I C+ G + AYKLM +M+EEK +PN+ Y ++
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM-QMMEEKGCQPNVVTYTAMI 786
Query: 481 ELLRKAGQLKMHEELVEKMVARG 503
+ G+++ EL+E+M ++G
Sbjct: 787 DGFGMIGKIETCLELLERMGSKG 809
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 183/364 (50%), Gaps = 17/364 (4%)
Query: 117 KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
+ F Y ++L+ +LA+ L + MK G+ T+++++ + +AGL +
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIH 235
A FN M + G P+ V + ++ + + ++ A F++ + + P+++ Y++LI
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 236 GWCRAGKIERAEEIF------KDMKDAGI----------KPNVHTYSIVIDSLCRCGQIT 279
G C+AG++E+A +IF KD+ D + +PNV TY ++D C+ ++
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
A + M GC PN + +++L+ K G+ ++ +V +M A Y+ LI
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
+ + + + + A KVL+ M++ APN + + + K+ + A+++ M+E C
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Query: 400 PNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKL 459
PN +TY ++ F I+ L+L + M V PN TYR+LI C+ G + A+ L
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836
Query: 460 MKEM 463
++EM
Sbjct: 837 LEEM 840
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 166/403 (41%), Gaps = 61/403 (15%)
Query: 161 FSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK 220
++ LI A L EA+ NRM P+ V S ++ K++ + + +
Sbjct: 305 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364
Query: 221 -DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLC------ 273
+ P ++ SL+H +C +G A ++ K M G P Y+I+I S+C
Sbjct: 365 MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSL 424
Query: 274 RCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV-------------- 319
C + A ++EM+ AG N + +S R AG+ EK V
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484
Query: 320 ---------------------FNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLM 358
F +MKR AD Y +++ C+ +E+A K N M
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 359 VKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILM--------- 409
+ G PN T+ ++ K V+ A+ ++ M CLPN +TY+ L+
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 410 --------RMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMK 461
RM SK + V K+ D+N PNV TY L+ FC+ A KL+
Sbjct: 605 EKACQIFERMCG-SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 462 EMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
M E +PN VY+ +++ L K G+L +E+ +M GF
Sbjct: 664 AMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 173/439 (39%), Gaps = 46/439 (10%)
Query: 107 LAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIR 166
++FF WA + + Y ++DL + + + ++ E+ E +VL+R
Sbjct: 149 ISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVR 208
Query: 167 RYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEP 225
++ R G + A+ R++D+ P + + ++ + + R + A +
Sbjct: 209 KHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRM 268
Query: 226 DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVF 285
D + C+ GK A + ++ P+ Y+ +I LC A D
Sbjct: 269 DGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFL 325
Query: 286 AEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRD 345
M C PN VT+++L+ + + + +V N M C +N L+ +C
Sbjct: 326 NRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTS 385
Query: 346 ENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHD------VNGAHRMYAKM------ 393
+ A K+L MVK G P +N + G I D ++ A + Y++M
Sbjct: 386 GDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVV 445
Query: 394 -KELN------CL----------------------PNTLTYNILMRMFAESKSIDMVLKL 424
++N CL P+T TY+ ++ + +++ L
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
+EM + +V TY I++ FC+ G A K EM E PN+ Y ++
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM-REVGCTPNVVTYTALIHAYL 564
Query: 485 KAGQLKMHEELVEKMVARG 503
KA ++ EL E M++ G
Sbjct: 565 KAKKVSYANELFETMLSEG 583
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 36/297 (12%)
Query: 113 ATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAG 172
A S++ + Y ++D K+ D A + M G T T+S LI RY +
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 173 LAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYT 231
A ++M + AP+ V + ++ LC+ + +EA ++++ +P+V+ YT
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 232 SLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM--- 288
++I G+ GKIE E+ + M G+ PN TY ++ID C+ G + AH++ EM
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 843
Query: 289 --------------------------IDAGCNPNAVTFNSLMRV----HVKAGRTEKVLQ 318
+D + F S+ R+ +KA R E L+
Sbjct: 844 HWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALR 903
Query: 319 VFNQMKRFNCAADTIG--YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
+ ++ F+ YN LIE C +E A ++ + M KKGV P +F S+
Sbjct: 904 LLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL 960
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 105/236 (44%), Gaps = 5/236 (2%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y EM+D K+ D A+ L+ M+ +G + T++ +I + G + RM
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPD-VILYTSLIHGWCRAGKIE 244
GVAP+ V +++ C+ + A + + +K P Y +I G+ + +
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFI 864
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM--IDAGCNPNAVTFNS 302
+ + ++ P + Y ++ID+L + ++ A + E+ A + T+NS
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 924
Query: 303 LMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLM 358
L+ A + E Q+F++M + + + LI+ R+ + EA+ +L+ +
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 198/390 (50%), Gaps = 2/390 (0%)
Query: 109 FFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRY 168
FF WA + F Y M+ + K R F+ +++ M T+G+ +T ETF++ ++ +
Sbjct: 181 FFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAF 239
Query: 169 VRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVI 228
A +AV F M+ Y ++ ++ SL R + +EAQ FD +K+RF P+++
Sbjct: 240 AAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMM 299
Query: 229 LYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM 288
YT L++GWCR + A I+ DM D G+KP++ ++++++ L R + + A +F M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVM 359
Query: 289 IDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL 348
G PN ++ ++R K E ++ F+ M D Y LI + L
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 349 EEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNIL 408
+ ++L M +KG P+ T+N++ +A A R+Y KM + P+ T+N++
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMI 479
Query: 409 MRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
M+ + +++ +M + +EM + + P+ N+Y +LI +G A + ++EM+ +K
Sbjct: 480 MKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEML-DKG 538
Query: 469 LKPNLQVYENVLELLRKAGQLKMHEELVEK 498
+K L Y + GQ ++ EEL ++
Sbjct: 539 MKTPLIDYNKFAADFHRGGQPEIFEELAQR 568
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 202/404 (50%), Gaps = 14/404 (3%)
Query: 108 AFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVE----ITAETFSV 163
+ F WA F SP + +++ K R F++AW L+ + R E ++A+TF V
Sbjct: 120 SVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFD-RVRSDEGSNLVSADTFIV 178
Query: 164 LIRRYVRAGLAAEAVHAFNRMEDY----GVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV 219
LIRRY RAG+ +A+ AF Y A + + +++ +LC++ EA + + +
Sbjct: 179 LIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERI 238
Query: 220 KDRFE----PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRC 275
+ P V ++ L++GW R+ K+++AE+++++MK +KP V TY +I+ CR
Sbjct: 239 GGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRM 298
Query: 276 GQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGY 335
++ A +V EM A N + FN ++ +AGR + L + + + Y
Sbjct: 299 RRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTY 358
Query: 336 NFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKE 395
N L++ C+ +L A K+L +M+ +GV P ++T+N F +K + +Y K+ E
Sbjct: 359 NSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIE 418
Query: 396 LNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNN 455
P+ LTY+++++M E + + +++ KEM ++P++ T +LI + C
Sbjct: 419 AGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEE 478
Query: 456 AYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
A++ V + + P ++ + LR G M + L M
Sbjct: 479 AFEEFDNAV-RRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLM 521
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 163/372 (43%), Gaps = 15/372 (4%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME-DYGVAPDKVAVSIVVSSL 203
L ++ G+E + E L R + + +V + M+ + ++P VV+SL
Sbjct: 88 LESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPS--LFDSVVNSL 145
Query: 204 CRKRRAEEAQSF-FDSVKDRFEPDVI---LYTSLIHGWCRAGKIERAEEIFKDMKD---- 255
C+ R E A S FD V+ +++ + LI + RAG +++A F+ +
Sbjct: 146 CKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPV 205
Query: 256 AGIKPNVHTYSIVIDSLCRCGQITRAH---DVFAEMIDAGCNPNAVTFNSLMRVHVKAGR 312
+ +++D+LC+ G + A + +D+ P+ FN L+ ++ +
Sbjct: 206 CKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRK 265
Query: 313 TEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNS 372
++ +++ +MK N + Y LIE +CR ++ A++VL M + N FN
Sbjct: 266 LKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNP 325
Query: 373 IFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQ 432
I + + ++ A M + P +TYN L++ F ++ + K+ K M
Sbjct: 326 IIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRG 385
Query: 433 VEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMH 492
V+P TY F + L +++E P+ Y +L++L + G+L +
Sbjct: 386 VDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGH-SPDRLTYHLILKMLCEDGKLSLA 444
Query: 493 EELVEKMVARGF 504
++ ++M RG
Sbjct: 445 MQVNKEMKNRGI 456
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 203/394 (51%), Gaps = 8/394 (2%)
Query: 103 FYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFS 162
+ +L WA S K S + Y +D+ GK + +D ++ M+ + +T T +
Sbjct: 101 WRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKL-VTLNTVA 159
Query: 163 VLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR 222
++RR+ AG EAV F+R+ ++G+ + ++++++ +LC+++R E+A+ +K
Sbjct: 160 KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH 219
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
P+ + IHGWC+A ++E A ++MK G +P V +Y+ +I C+ + + +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
++ +EM G PN++T+ ++M E+ L+V +MKR C D++ YN LI
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 343 CRDENLEEAVKVLNL-MVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELN-CLP 400
R LEEA +V + M + GV+ N+ST+NS+ + + A + +M+ N C P
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNP 399
Query: 401 NTLTYNILMRMFAESKSIDMVLKLKKEM-DENQVEPNVNTYRILILMFCEKGHWNNAYKL 459
+ TY L+R + + V KL KEM ++ + + +TY LI C AY L
Sbjct: 400 DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCL 459
Query: 460 MKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHE 493
+EM+ + + P + L LL + + MHE
Sbjct: 460 FEEMISQ-DITPR---HRTCLLLLEEVKKKNMHE 489
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 134/268 (50%), Gaps = 2/268 (0%)
Query: 240 AGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVT 299
AG+ E A IF + + G++ N + ++++D+LC+ ++ +A V ++ + PNA T
Sbjct: 168 AGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHT 226
Query: 300 FNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMV 359
FN + KA R E+ L +MK I Y +I C+C+ + ++L+ M
Sbjct: 227 FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEME 286
Query: 360 KKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSID 419
G PNS T+ +I + + A R+ +MK C P++L YN L+ A + ++
Sbjct: 287 ANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 420 MVLKL-KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYEN 478
++ + EM E V N +TY +I M+C + A +L+KEM P++ Y+
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 479 VLELLRKAGQLKMHEELVEKMVARGFVS 506
+L K G + +L+++MV + +S
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEMVTKHHLS 434
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 203/394 (51%), Gaps = 8/394 (2%)
Query: 103 FYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFS 162
+ +L WA S K S + Y +D+ GK + +D ++ M+ + +T T +
Sbjct: 101 WRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKL-VTLNTVA 159
Query: 163 VLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR 222
++RR+ AG EAV F+R+ ++G+ + ++++++ +LC+++R E+A+ +K
Sbjct: 160 KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH 219
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
P+ + IHGWC+A ++E A ++MK G +P V +Y+ +I C+ + + +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
++ +EM G PN++T+ ++M E+ L+V +MKR C D++ YN LI
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 343 CRDENLEEAVKVLNL-MVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELN-CLP 400
R LEEA +V + M + GV+ N+ST+NS+ + + A + +M+ N C P
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNP 399
Query: 401 NTLTYNILMRMFAESKSIDMVLKLKKEM-DENQVEPNVNTYRILILMFCEKGHWNNAYKL 459
+ TY L+R + + V KL KEM ++ + + +TY LI C AY L
Sbjct: 400 DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCL 459
Query: 460 MKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHE 493
+EM+ + + P + L LL + + MHE
Sbjct: 460 FEEMISQ-DITPR---HRTCLLLLEEVKKKNMHE 489
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 134/268 (50%), Gaps = 2/268 (0%)
Query: 240 AGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVT 299
AG+ E A IF + + G++ N + ++++D+LC+ ++ +A V ++ + PNA T
Sbjct: 168 AGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHT 226
Query: 300 FNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMV 359
FN + KA R E+ L +MK I Y +I C+C+ + ++L+ M
Sbjct: 227 FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEME 286
Query: 360 KKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSID 419
G PNS T+ +I + + A R+ +MK C P++L YN L+ A + ++
Sbjct: 287 ANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 420 MVLKL-KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYEN 478
++ + EM E V N +TY +I M+C + A +L+KEM P++ Y+
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 479 VLELLRKAGQLKMHEELVEKMVARGFVS 506
+L K G + +L+++MV + +S
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEMVTKHHLS 434
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 189/363 (52%), Gaps = 2/363 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+D M G + TF+ LI A+EAV ++M G PD V VV+
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 202 SLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC++ + A S + K + E DV++Y ++I G C+ ++ A +F +M + GI+P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+V TYS +I LC G+ + A + ++MI+ NPN VTF++L+ VK G+ + +++
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
++M + + D Y+ LI C + L+EA + LM+ K PN T++++ K
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
V ++ +M + + NT+TY L+ F +++ D + K+M V PN+ TY
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
IL+ C+ G A + E ++ +++P++ Y ++E + KAG+++ EL +
Sbjct: 472 NILLDGLCKNGKLAKAMVVF-EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 501 ARG 503
+G
Sbjct: 531 LKG 533
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 182/366 (49%), Gaps = 2/366 (0%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
DLA L+ M+ +E ++ +I + +A++ F M++ G+ PD S +
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 200 VSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI 258
+S LC R +A D ++ + P+V+ +++LI + + GK+ AE+++ +M I
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 259 KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
P++ TYS +I+ C ++ A +F MI C PN VT+++L++ KA R E+ ++
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 319 VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
+F +M + +T+ Y LI + + + A V MV GV PN T+N + +
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 379 KLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVN 438
K + A ++ ++ P+ TYNI++ ++ ++ +L + V PNV
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 439 TYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEK 498
Y +I FC KG A L+K+M E+ L PN Y ++ + G + EL+++
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGDREASAELIKE 598
Query: 499 MVARGF 504
M + GF
Sbjct: 599 MRSCGF 604
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 199/405 (49%), Gaps = 8/405 (1%)
Query: 108 AFFNWATSL---KNFPSSPEPYIEMLD--LAGKLRHFDLAWHLIDSMKTRGVEITAETFS 162
+FFN S ++F S+ Y E+L L+ ++ D D +K+R E F+
Sbjct: 29 SFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVE-FN 87
Query: 163 VLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KD 221
L+ + + +M+ G++ D SI ++ CR+ + A + + K
Sbjct: 88 KLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL 147
Query: 222 RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRA 281
+EPD++ +SL++G+C + +I A + M + G KP+ T++ +I L + + A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 282 HDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIEC 341
+ +M+ GC P+ VT+ +++ K G + L + +M++ AD + YN +I+
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Query: 342 HCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPN 401
C+ +++++A+ + M KG+ P+ T++S+ C+ + A R+ + M E PN
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 402 TLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMK 461
+T++ L+ F + + KL EM + ++P++ TY LI FC + A K M
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA-KHMF 386
Query: 462 EMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVS 506
E++ K PN+ Y +++ KA +++ EL +M RG V
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 1/276 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L D M R ++ T+S LI + EA H F M P+ V S ++
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
C+ +R EE F + R + + YT+LIHG+ +A + A+ +FK M G+ P
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
N+ TY+I++D LC+ G++ +A VF + + P+ T+N ++ KAG+ E ++F
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ + + I YN +I CR + EEA +L M + G PNS T+N++ +
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESK 416
D + + +M+ + T ++ M + +
Sbjct: 587 GDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 622
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
R D A + M + GV T+++L+ + G A+A+ F ++ + PD
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD 255
+I++ +C+ + E+ F ++ + P+VI Y ++I G+CR G E A+ + K MK+
Sbjct: 507 NIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Query: 256 AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEK 315
G PN TY+ +I + R G + ++ EM G +A T L+ + GR +K
Sbjct: 567 DGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDK 625
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 213/433 (49%), Gaps = 37/433 (8%)
Query: 106 SLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLI 165
S+++FN P S + +L F+ W + K++ V + +F +LI
Sbjct: 113 SISYFNEMVDNGFVPGS-NCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILI 170
Query: 166 RRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQS-FFDSVKDRFE 224
+ AG ++ + ++G +P+ V + ++ C+K E+A+ FF+ K
Sbjct: 171 KGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLV 230
Query: 225 PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDV 284
+ YT LI+G + G ++ E+++ M++ G+ PN++TY+ V++ LC+ G+ A V
Sbjct: 231 ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQV 290
Query: 285 FAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
F EM + G + N VT+N+L+ + + + +V +QMK + I YN LI+ C
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCG 350
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
L +A+ + + +G++P+ T+N + + D +GA +M +M+E P+ +T
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
Y IL+ FA S +++ ++L+ M+E + P+V+TY +LI FC KG N A +L K MV
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Query: 465 ----------------------------------EEKSLKPNLQVYENVLELLRKAGQLK 490
EEK L PN+ Y ++E+L K + K
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSK 530
Query: 491 MHEELVEKMVARG 503
E LVEKM+ G
Sbjct: 531 EAERLVEKMIDSG 543
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 36/268 (13%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A+ + D M+ RGV T++ LI R EA ++M+ G+ P+ + + ++
Sbjct: 287 AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID 346
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIK- 259
C + +A S +K R P ++ Y L+ G+CR G A ++ K+M++ GIK
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406
Query: 260 ----------------------------------PNVHTYSIVIDSLCRCGQITRAHDVF 285
P+VHTYS++I C GQ+ A +F
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466
Query: 286 AEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRD 345
M++ C PN V +N+++ + K G + + L++ +M+ A + Y ++IE C++
Sbjct: 467 KSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKE 526
Query: 346 ENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
+EA +++ M+ G+ P++S + I
Sbjct: 527 RKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 108/280 (38%), Gaps = 35/280 (12%)
Query: 259 KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHV---------- 308
K Y ++I+S + + + F EM+D G P + FN L+ V
Sbjct: 91 KTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWS 150
Query: 309 ------------------------KAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
+AG EK + ++ F + + + Y LI+ C+
Sbjct: 151 FFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCK 210
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
+E+A + M K G+ N T+ + + K MY KM+E PN T
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
YN +M + ++ EM E V N+ TY LI C + N A K++ +M
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM- 329
Query: 465 EEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+ + PNL Y +++ G+L L + +RG
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 203/425 (47%), Gaps = 37/425 (8%)
Query: 117 KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
K F S + ++ ++ +LAW + + GV I T ++++ + G +
Sbjct: 194 KGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEK 253
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIH 235
+++++ GV PD V + ++S+ K EEA +++ + F P V Y ++I+
Sbjct: 254 VGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVIN 313
Query: 236 GWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNP 295
G C+ GK ERA+E+F +M +G+ P+ TY ++ C+ G + VF++M P
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 296 NAVTFNSLMRVHVKAGRTEKVLQVFNQMK------------------------------- 324
+ V F+S+M + ++G +K L FN +K
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 325 ----RFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ CA D + YN ++ C+ + L EA K+ N M ++ + P+S T + KL
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
++ A ++ KMKE + +TYN L+ F + ID ++ +M ++ P +Y
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
IL+ C KGH A+++ EM+ K++KP + + ++++ ++G E +EKM+
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMIS-KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 501 ARGFV 505
+ GFV
Sbjct: 613 SEGFV 617
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 216/437 (49%), Gaps = 13/437 (2%)
Query: 74 SRLSAAHPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLA 133
RLS A S R+I + G R I F N ++ F Y++ A
Sbjct: 127 GRLSDAQ----SCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQ----A 178
Query: 134 GKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDK 193
KLR A+ L ++++G ++ + + LI VR G A + + GV +
Sbjct: 179 RKLREAHEAFTL---LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINV 235
Query: 194 VAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKD 252
++I+V++LC+ + E+ +F V+++ PD++ Y +LI + G +E A E+
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 253 MKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGR 312
M G P V+TY+ VI+ LC+ G+ RA +VFAEM+ +G +P++ T+ SL+ K G
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355
Query: 313 TEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNS 372
+ +VF+ M+ + D + ++ ++ R NL++A+ N + + G+ P++ +
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 373 IFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQ 432
+ + ++ A + +M + C + +TYN ++ + K + KL EM E
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 433 VEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMH 492
+ P+ T ILI C+ G+ NA +L ++M +EK ++ ++ Y +L+ K G +
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKM-KEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 493 EELVEKMVARGFVSRPL 509
+E+ MV++ + P+
Sbjct: 535 KEIWADMVSKEILPTPI 551
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 186/399 (46%), Gaps = 37/399 (9%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A+ L+++M +G T++ +I + G A F M G++PD ++
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
C+K E + F ++ R PD++ ++S++ + R+G +++A F +K+AG+ P
Sbjct: 349 EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+ Y+I+I CR G I+ A ++ EM+ GC + VT+N+++ K + ++F
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
N+M D+ LI+ HC+ NL+ A+++ M +K + + T+N++ K+
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVN-- 438
D++ A ++A M LP ++Y+IL+ + ++ EM ++P V
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588
Query: 439 ---------------------------------TYRILILMFCEKGHWNNAYKLMKEMVE 465
+Y LI F + + + A+ L+K+M E
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Query: 466 EK-SLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
E+ L P++ Y ++L + Q+K E ++ KM+ RG
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 171/343 (49%), Gaps = 3/343 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
+ M+ L + + D A +S+K G+ +++LI+ Y R G+ + A++ N M
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIE 244
G A D V + ++ LC+++ EA F+ + +R PD T LI G C+ G ++
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A E+F+ MK+ I+ +V TY+ ++D + G I A +++A+M+ P ++++ L+
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
G + +V+++M N + N +I+ +CR N + L M+ +G
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKE--LNCLPNTLTYNILMRMFAESKSIDMVL 422
P+ ++N++ + +++ A + KM+E +P+ TYN ++ F +
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 677
Query: 423 KLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVE 465
+ ++M E V P+ +TY +I F + + A+++ EM++
Sbjct: 678 VVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 159/337 (47%), Gaps = 8/337 (2%)
Query: 105 QSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRH--FDLAWHLIDSMKTRGVEITAETFS 162
++L +FN S+K P+ I + + G R +A +L + M +G + T++
Sbjct: 393 KALMYFN---SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 163 VLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD- 221
++ + + EA FN M + + PD ++I++ C+ + A F +K+
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 222 RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRA 281
R DV+ Y +L+ G+ + G I+ A+EI+ DM I P +YSI++++LC G + A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 282 HDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIEC 341
V+ EMI P + NS+++ + ++G +M D I YN LI
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629
Query: 342 HCRDENLEEAVKVLNLMVKK--GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
R+EN+ +A ++ M ++ G+ P+ T+NSI + + + A + KM E
Sbjct: 630 FVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN 689
Query: 400 PNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPN 436
P+ TY ++ F ++ ++ EM + P+
Sbjct: 690 PDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 187/363 (51%), Gaps = 2/363 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+D M G + TF+ L+ + A+EAV RM G PD V V++
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 202 SLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC++ + A + + + K + E DV++Y+++I C+ ++ A +F +M + GI+P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+V TYS +I LC G+ + A + ++M++ NPN VTFNSL+ K G+ + ++F
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
++M + + + + YN LI C + L+EA ++ LMV K P+ T+N++ K
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
V ++ M + NT+TY L+ F ++ D + K+M + V PN+ TY
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
L+ C+ G A + E +++ ++P++ Y + E + KAG+++ +L +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVF-EYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLS 512
Query: 501 ARG 503
+G
Sbjct: 513 LKG 515
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 176/361 (48%), Gaps = 2/361 (0%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
DLA +L++ M+ +E +S +I + +A++ F M++ G+ PD S +
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 200 VSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI 258
+S LC R +A D ++ + P+V+ + SLI + + GK+ AE++F +M I
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 259 KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
PN+ TY+ +I+ C ++ A +F M+ C P+ VT+N+L+ KA + ++
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 319 VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
+F M R +T+ Y LI + + + A V MV GV PN T+N++ +
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 379 KLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVN 438
K + A ++ +++ P+ TYNI+ ++ ++ L + V+P+V
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 439 TYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEK 498
Y +I FC+KG AY L +M E+ L P+ Y ++ + G EL+++
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIKE 580
Query: 499 M 499
M
Sbjct: 581 M 581
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 186/367 (50%), Gaps = 4/367 (1%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y M++ + A ++ M G + T + L+ + +EAV ++M
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIE 244
+ G PD V + +V L + +A EA + + V +PD++ Y ++I+G C+ G+ +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A + M+ I+ +V YS VIDSLC+ + A ++F EM + G P+ T++SL+
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
GR ++ + M + + +N LI+ ++ L EA K+ + M+++ +
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 365 PNSSTFNSIFGCIAKLHD-VNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLK 423
PN T+NS+ +HD ++ A +++ M +CLP+ +TYN L+ F ++K + ++
Sbjct: 343 PNIVTYNSLINGFC-MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 424 LKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELL 483
L ++M + N TY LI F + +NA + K+MV + + PN+ Y +L+ L
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGL 460
Query: 484 RKAGQLK 490
K G+L+
Sbjct: 461 CKNGKLE 467
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 147/307 (47%), Gaps = 1/307 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+ M R + TF+ LI + + G EA F+ M + P+ V + +++
Sbjct: 294 ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Query: 202 SLCRKRRAEEAQSFFD-SVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
C R +EAQ F V PDV+ Y +LI+G+C+A K+ E+F+DM G+
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG 413
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
N TY+ +I + A VF +M+ G +PN +T+N+L+ K G+ EK + VF
Sbjct: 414 NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 473
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+++ D YN + E C+ +E+ + + KGV P+ +N++ K
Sbjct: 474 EYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKK 533
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
A+ ++ KMKE LP++ TYN L+R +L KEM + + +TY
Sbjct: 534 GLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Query: 441 RILILMF 447
++ M
Sbjct: 594 GLVTDML 600
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 165/328 (50%), Gaps = 2/328 (0%)
Query: 183 RMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAG 241
+ME GV+ + +I+++ LCR+ + A + + K + P ++ SL++G+C
Sbjct: 90 KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 149
Query: 242 KIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFN 301
+I A + M + G +P+ T++ ++ L + + + A + M+ GC P+ VT+
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209
Query: 302 SLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKK 361
+++ K G + L + N+M++ AD + Y+ +I+ C+ ++++A+ + M K
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 362 GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMV 421
G+ P+ T++S+ C+ + A R+ + M E PN +T+N L+ FA+ +
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 422 LKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
KL EM + ++PN+ TY LI FC + A ++ MV + L P++ Y ++
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL-PDVVTYNTLIN 388
Query: 482 LLRKAGQLKMHEELVEKMVARGFVSRPL 509
KA ++ EL M RG V +
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 157/315 (49%), Gaps = 1/315 (0%)
Query: 188 GVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAE 247
G++ D + ++L + E F + VK R P ++ ++ L+ + K +
Sbjct: 26 GLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVI 85
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
+ M+ G+ N++TY+I+I+ LCR Q++ A + +M+ G P+ VT NSL+
Sbjct: 86 SFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGF 145
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
R + + + +QM DT+ + L+ + EAV ++ MV KG P+
Sbjct: 146 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 205
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKE 427
T+ ++ + K + + A + KM++ + + Y+ ++ + + +D L L E
Sbjct: 206 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 428 MDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
MD + P+V TY LI C G W++A +L+ +M+E K + PN+ + ++++ K G
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK-INPNVVTFNSLIDAFAKEG 324
Query: 488 QLKMHEELVEKMVAR 502
+L E+L ++M+ R
Sbjct: 325 KLIEAEKLFDEMIQR 339
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 1/276 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L D M R ++ T++ LI + EA F M PD V + +++
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
C+ ++ + F + R + + YT+LIHG+ +A + A+ +FK M G+ P
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
N+ TY+ ++D LC+ G++ +A VF + + P+ T+N + KAG+ E +F
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ D I YN +I C+ EEA + M + G P+S T+N++ +
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESK 416
D + + +M+ + TY ++ M + +
Sbjct: 569 GDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGR 604
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 185/363 (50%), Gaps = 2/363 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A HL+ M+ +G ++S ++ Y R G + M+ G+ P+ ++
Sbjct: 265 AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 324
Query: 202 SLCRK-RRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LCR + AE ++F + ++ PD ++YT+LI G+C+ G I A + F +M I P
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+V TY+ +I C+ G + A +F EM G P++VTF L+ + KAG + +V
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
N M + C+ + + Y LI+ C++ +L+ A ++L+ M K G+ PN T+NSI + K
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
++ A ++ + + +T+TY LM + +S +D ++ KEM ++P + T+
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
+L+ FC G + KL+ M+ K + PN + ++++ LK + + M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWML-AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 501 ARG 503
+RG
Sbjct: 624 SRG 626
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 192/390 (49%), Gaps = 2/390 (0%)
Query: 116 LKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAA 175
LK + Y +++ + D W LI+ MK +G++ + + +I R A
Sbjct: 274 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 333
Query: 176 EAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLI 234
EA AF+ M G+ PD V + ++ C++ A FF + R PDV+ YT++I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 235 HGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCN 294
G+C+ G + A ++F +M G++P+ T++ +I+ C+ G + A V MI AGC+
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 295 PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKV 354
PN VT+ +L+ K G + ++ ++M + + YN ++ C+ N+EEAVK+
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
+ G+ ++ T+ ++ K +++ A + +M P +T+N+LM F
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 415 SKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQ 474
++ KL M + PN T+ L+ +C + + A + K+M + + P+ +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS-RGVGPDGK 632
Query: 475 VYENVLELLRKAGQLKMHEELVEKMVARGF 504
YEN+++ KA +K L ++M +GF
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 169/342 (49%), Gaps = 1/342 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D K A M +R + T++ +I + + G EA F+ M
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIE 244
G+ PD V + +++ C+ ++A + ++ P+V+ YT+LI G C+ G ++
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A E+ +M G++PN+ TY+ +++ LC+ G I A + E AG N + VT+ +LM
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
+ K+G +K ++ +M + +N L+ C LE+ K+LN M+ KG+A
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
PN++TFNS+ +++ A +Y M P+ TY L++ +++++ L
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEE 466
+EM +V+TY +LI F ++ + A ++ +M E
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 198/456 (43%), Gaps = 61/456 (13%)
Query: 107 LAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTR-GVEIT---AETFS 162
L FF+WA S ++ S+ E ++ LA + +A LI S R + +T + F
Sbjct: 105 LDFFDWARSRRD--SNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFD 162
Query: 163 VLIRRY-----------------VRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCR 205
+L+ Y V GL EA F +M +YG+ + ++ ++ L +
Sbjct: 163 LLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK 222
Query: 206 K--RRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
+ A F + + +V Y +IH C+ G+I+ A + M+ G P+V
Sbjct: 223 DCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 264 TYSIVIDSLCRCGQITR-----------------------------------AHDVFAEM 288
+YS V++ CR G++ + A + F+EM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 289 IDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL 348
I G P+ V + +L+ K G + F +M + D + Y +I C+ ++
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 349 EEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNIL 408
EA K+ + M KG+ P+S TF + K + A R++ M + C PN +TY L
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 409 MRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
+ + +D +L EM + ++PN+ TY ++ C+ G+ A KL+ E E
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAG 521
Query: 469 LKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
L + Y +++ K+G++ +E++++M+ +G
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 159/377 (42%), Gaps = 47/377 (12%)
Query: 93 KCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDL--AGKLRHFDLAWHLIDSMK 150
K G IR F+ + + + + + + ++ D+ AGKL H M
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH---------EMF 413
Query: 151 TRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAE 210
+G+E + TF+ LI Y +AG +A N M G +P+ V + ++ LC++ +
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 211 EAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVI 269
A + K +P++ Y S+++G C++G IE A ++ + + AG+ + TY+ ++
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 270 DSLCRCGQITRAHDVFAEMIDAGCNP---------------------------------- 295
D+ C+ G++ +A ++ EM+ G P
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 296 -NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKV 354
NA TFNSL++ + + ++ M D Y L++ HC+ N++EA +
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
M KG + + ST++ + K A ++ +M+ + ++ +
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK 713
Query: 415 SKSIDMVLKLKKEMDEN 431
K D ++ E+ EN
Sbjct: 714 GKRPDTIVDPIDEIIEN 730
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 185/363 (50%), Gaps = 2/363 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A HL+ M+ +G ++S ++ Y R G + M+ G+ P+ ++
Sbjct: 265 AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 324
Query: 202 SLCRK-RRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LCR + AE ++F + ++ PD ++YT+LI G+C+ G I A + F +M I P
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+V TY+ +I C+ G + A +F EM G P++VTF L+ + KAG + +V
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
N M + C+ + + Y LI+ C++ +L+ A ++L+ M K G+ PN T+NSI + K
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
++ A ++ + + +T+TY LM + +S +D ++ KEM ++P + T+
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
+L+ FC G + KL+ M+ K + PN + ++++ LK + + M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWML-AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 501 ARG 503
+RG
Sbjct: 624 SRG 626
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 192/390 (49%), Gaps = 2/390 (0%)
Query: 116 LKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAA 175
LK + Y +++ + D W LI+ MK +G++ + + +I R A
Sbjct: 274 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 333
Query: 176 EAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLI 234
EA AF+ M G+ PD V + ++ C++ A FF + R PDV+ YT++I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 235 HGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCN 294
G+C+ G + A ++F +M G++P+ T++ +I+ C+ G + A V MI AGC+
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 295 PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKV 354
PN VT+ +L+ K G + ++ ++M + + YN ++ C+ N+EEAVK+
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
+ G+ ++ T+ ++ K +++ A + +M P +T+N+LM F
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 415 SKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQ 474
++ KL M + PN T+ L+ +C + + A + K+M + + P+ +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS-RGVGPDGK 632
Query: 475 VYENVLELLRKAGQLKMHEELVEKMVARGF 504
YEN+++ KA +K L ++M +GF
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 169/342 (49%), Gaps = 1/342 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D K A M +R + T++ +I + + G EA F+ M
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIE 244
G+ PD V + +++ C+ ++A + ++ P+V+ YT+LI G C+ G ++
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A E+ +M G++PN+ TY+ +++ LC+ G I A + E AG N + VT+ +LM
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
+ K+G +K ++ +M + +N L+ C LE+ K+LN M+ KG+A
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
PN++TFNS+ +++ A +Y M P+ TY L++ +++++ L
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEE 466
+EM +V+TY +LI F ++ + A ++ +M E
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 198/456 (43%), Gaps = 61/456 (13%)
Query: 107 LAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTR-GVEIT---AETFS 162
L FF+WA S ++ S+ E ++ LA + +A LI S R + +T + F
Sbjct: 105 LDFFDWARSRRD--SNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFD 162
Query: 163 VLIRRY-----------------VRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCR 205
+L+ Y V GL EA F +M +YG+ + ++ ++ L +
Sbjct: 163 LLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK 222
Query: 206 K--RRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
+ A F + + +V Y +IH C+ G+I+ A + M+ G P+V
Sbjct: 223 DCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 264 TYSIVIDSLCRCGQITR-----------------------------------AHDVFAEM 288
+YS V++ CR G++ + A + F+EM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 289 IDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL 348
I G P+ V + +L+ K G + F +M + D + Y +I C+ ++
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 349 EEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNIL 408
EA K+ + M KG+ P+S TF + K + A R++ M + C PN +TY L
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 409 MRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
+ + +D +L EM + ++PN+ TY ++ C+ G+ A KL+ E E
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAG 521
Query: 469 LKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
L + Y +++ K+G++ +E++++M+ +G
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 159/377 (42%), Gaps = 47/377 (12%)
Query: 93 KCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDL--AGKLRHFDLAWHLIDSMK 150
K G IR F+ + + + + + + ++ D+ AGKL H M
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH---------EMF 413
Query: 151 TRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAE 210
+G+E + TF+ LI Y +AG +A N M G +P+ V + ++ LC++ +
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 211 EAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVI 269
A + K +P++ Y S+++G C++G IE A ++ + + AG+ + TY+ ++
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 270 DSLCRCGQITRAHDVFAEMIDAGCNP---------------------------------- 295
D+ C+ G++ +A ++ EM+ G P
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 296 -NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKV 354
NA TFNSL++ + + ++ M D Y L++ HC+ N++EA +
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
M KG + + ST++ + K A ++ +M+ + ++ +
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK 713
Query: 415 SKSIDMVLKLKKEMDEN 431
K D ++ E+ EN
Sbjct: 714 GKRPDTIVDPIDEIIEN 730
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 197/390 (50%), Gaps = 2/390 (0%)
Query: 109 FFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRY 168
FF WA + F + Y M+ + K R F+ +++ M T+G+ +T ETF++ ++ +
Sbjct: 181 FFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAF 239
Query: 169 VRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVI 228
A +AV F M+ Y ++ ++ SL R + +EAQ FD +K+RF P+++
Sbjct: 240 AAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMM 299
Query: 229 LYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM 288
YT L++GWCR + A I+ DM D G+KP++ ++++++ L R + + A +F M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 359
Query: 289 IDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL 348
G PN ++ ++R K E ++ F+ M D Y LI + L
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 349 EEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNIL 408
+ ++L M +KG P+ T+N++ +A R+Y KM + P+ T+N++
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 479
Query: 409 MRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
M+ + +++ +M + EM + + P+ N+Y +LI +G A + ++EM+ +K
Sbjct: 480 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML-DKG 538
Query: 469 LKPNLQVYENVLELLRKAGQLKMHEELVEK 498
+K L Y + GQ ++ EEL ++
Sbjct: 539 MKTPLIDYNKFAADFHRGGQPEIFEELAQR 568
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 197/393 (50%), Gaps = 2/393 (0%)
Query: 106 SLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLI 165
+ FF WA + F Y M+ + K R F+ +++ M T+G+ +T ETF++ +
Sbjct: 177 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAM 235
Query: 166 RRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEP 225
+ + A +AV F M+ Y ++ ++ SL R + +EAQ FD +K+RF P
Sbjct: 236 KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP 295
Query: 226 DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVF 285
+++ YT L++GWCR + A I+ DM D G+KP++ ++++++ L R + + A +F
Sbjct: 296 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 355
Query: 286 AEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRD 345
M G PN ++ ++R K E ++ F+ M D Y LI
Sbjct: 356 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 415
Query: 346 ENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTY 405
+ L+ ++L M +KG P+ T+N++ +A R+Y KM + P+ T+
Sbjct: 416 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTF 475
Query: 406 NILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVE 465
N++M+ + +++ +M + EM + + P+ N+Y +LI +G A + ++EM+
Sbjct: 476 NMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML- 534
Query: 466 EKSLKPNLQVYENVLELLRKAGQLKMHEELVEK 498
+K +K L Y + GQ ++ EEL ++
Sbjct: 535 DKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 567
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 188/363 (51%), Gaps = 2/363 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+D M + TF+ LI A+EAV +RM G PD VV+
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 228
Query: 202 SLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC++ + A S + K + E DV++YT++I C + A +F +M + GI+P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
NV TY+ +I LC G+ + A + ++MI+ NPN VTF++L+ VK G+ + +++
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
++M + + D Y+ LI C + L+EA + LM+ K PN T+N++ K
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
V ++ +M + + NT+TYN L++ ++ DM K+ K+M + V P++ TY
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
IL+ C+ G A + E +++ ++P++ Y ++E + KAG+++ +L +
Sbjct: 469 SILLDGLCKYGKLEKALVVF-EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 501 ARG 503
+G
Sbjct: 528 LKG 530
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 185/368 (50%), Gaps = 2/368 (0%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
DLA L+ M+ +E ++ +I +A++ F M++ G+ P+ V + +
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 200 VSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI 258
+ LC R +A D ++ + P+V+ +++LI + + GK+ AE+++ +M I
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 259 KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
P++ TYS +I+ C ++ A +F MI C PN VT+N+L++ KA R E+ ++
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 319 VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
+F +M + +T+ YN LI+ + + + A K+ MV GV P+ T++ + +
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 379 KLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVN 438
K + A ++ +++ P+ TYNI++ ++ ++ L + V+PNV
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 439 TYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEK 498
Y +I FC KG A L +EM E+ +L PN Y ++ + G EL+++
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTL-PNSGTYNTLIRARLRDGDKAASAELIKE 595
Query: 499 MVARGFVS 506
M + GFV
Sbjct: 596 MRSCGFVG 603
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 197/411 (47%), Gaps = 43/411 (10%)
Query: 121 SSPEPYI----EMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
S P P I ++L K+ FDL L + M+ + ++++LI + R
Sbjct: 74 SRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPL 133
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFD------------------- 217
A+ +M G PD V +S +++ C +R EA + D
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 218 ------------SVKDRF-----EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
++ DR +PD+ Y ++++G C+ G I+ A + K M+ I+
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+V Y+ +ID+LC + A ++F EM + G PN VT+NSL+R GR ++
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ M + + ++ LI+ ++ L EA K+ + M+K+ + P+ T++S+ +
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC-M 372
Query: 381 HD-VNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNT 439
HD ++ A M+ M +C PN +TYN L++ F ++K ++ ++L +EM + + N T
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 440 YRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK 490
Y LI + G + A K+ K+MV + + P++ Y +L+ L K G+L+
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLE 482
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 162/325 (49%), Gaps = 2/325 (0%)
Query: 183 RMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAG 241
RM++ ++ D + +I+++ CR+ + A + + K +EPD++ +SL++G+C
Sbjct: 105 RMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGK 164
Query: 242 KIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFN 301
+I A + M +PN T++ +I L + + A + M+ GC P+ T+
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 302 SLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKK 361
+++ K G + L + +M++ AD + Y +I+ C +N+ +A+ + M K
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 362 GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMV 421
G+ PN T+NS+ C+ + A R+ + M E PN +T++ L+ F + +
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 422 LKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
KL EM + ++P++ TY LI FC + A K M E++ K PN+ Y +++
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA-KHMFELMISKDCFPNVVTYNTLIK 403
Query: 482 LLRKAGQLKMHEELVEKMVARGFVS 506
KA +++ EL +M RG V
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVG 428
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 146/288 (50%), Gaps = 1/288 (0%)
Query: 215 FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
F + V+ R P ++ + L+ + K + + + M++ I ++++Y+I+I+ CR
Sbjct: 68 FGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCR 127
Query: 275 CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIG 334
Q+ A V +M+ G P+ VT +SL+ + R + + + +QM +T+
Sbjct: 128 RSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVT 187
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMK 394
+N LI EAV +++ MV +G P+ T+ ++ + K D++ A + KM+
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247
Query: 395 ELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWN 454
+ + + Y ++ K+++ L L EMD + PNV TY LI C G W+
Sbjct: 248 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 307
Query: 455 NAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
+A +L+ +M+E K + PN+ + +++ K G+L E+L ++M+ R
Sbjct: 308 DASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 1/276 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L D M R ++ T+S LI + EA H F M P+ V + ++
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
C+ +R EE F + R + + Y +LI G +AG + A++IFK M G+ P
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
++ TYSI++D LC+ G++ +A VF + + P+ T+N ++ KAG+ E +F
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ + I Y +I CR EEA + M + G PNS T+N++ +
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 583
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESK 416
D + + +M+ + + T ++++ M + +
Sbjct: 584 GDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 1/198 (0%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV 194
K + + L M RG+ T++ LI+ +AG A F +M GV PD +
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
SI++ LC+ + E+A F+ + K + EPD+ Y +I G C+AGK+E ++F +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRT 313
G+KPNV Y+ +I CR G A +F EM + G PN+ T+N+L+R ++ G
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 586
Query: 314 EKVLQVFNQMKRFNCAAD 331
++ +M+ D
Sbjct: 587 AASAELIKEMRSCGFVGD 604
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Query: 120 PSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVH 179
P Y +LD K + A + + ++ +E T++++I +AG +
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 180 AFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWC 238
F + GV P+ + + ++S CRK EEA + F +K D P+ Y +LI
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 239 RAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSL 272
R G + E+ K+M+ G + T S+VI+ L
Sbjct: 582 RDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
D L++AV + MV+ P+ FN + IAK++ + + +M+ L + +
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
YNIL+ F + + L + +M + EP++ T L+ +C + A L+ +M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 465 EEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+ +PN + ++ L + L+++MVARG
Sbjct: 178 VME-YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 188/363 (51%), Gaps = 2/363 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+ M G + + TF+ LI R A+EAV +RM G PD V IVV+
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 202 SLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC++ + A S + + + EP V++Y ++I C + A +F +M + GI+P
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
NV TY+ +I LC G+ + A + ++MI+ NPN VTF++L+ VK G+ + +++
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
++M + + D Y+ LI C + L+EA + LM+ K PN T+N++ K
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
V+ ++ +M + + NT+TY L+ F +++ D + K+M + V P++ TY
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
IL+ C G A + E ++ ++P++ Y ++E + KAG+++ +L +
Sbjct: 470 SILLDGLCNNGKVETALVVF-EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 501 ARG 503
+G
Sbjct: 529 LKG 531
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 199/409 (48%), Gaps = 40/409 (9%)
Query: 119 FPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVR-------- 170
FPS E + ++L K+ FDL L + M+ G+ T+S+LI + R
Sbjct: 78 FPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLAL 136
Query: 171 AGLA---------------------------AEAVHAFNRMEDYGVAPDKVAVSIVVSSL 203
A LA ++AV +M + G PD + ++ L
Sbjct: 137 AVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGL 196
Query: 204 CRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNV 262
R RA EA + D V +PD++ Y +++G C+ G I+ A + K M+ I+P V
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 263 HTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQ 322
Y+ +ID+LC + A ++F EM + G PN VT+NSL+R GR ++ +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 323 MKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHD 382
M + + ++ LI+ ++ L EA K+ + M+K+ + P+ T++S+ +HD
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC-MHD 375
Query: 383 -VNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYR 441
++ A M+ M +C PN +TYN L++ F ++K +D ++L +EM + + N TY
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 442 ILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK 490
LI F + +NA + K+MV + L P++ Y +L+ L G+++
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVL-PDIMTYSILLDGLCNNGKVE 483
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 147/288 (51%), Gaps = 1/288 (0%)
Query: 215 FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
F D VK R P ++ ++ L+ + K + + + M++ GI N++TYSI+I+ CR
Sbjct: 69 FGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCR 128
Query: 275 CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIG 334
Q++ A V A+M+ G P+ VT NSL+ R + + QM D+
Sbjct: 129 RSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFT 188
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMK 394
+N LI R EAV +++ MV KG P+ T+ + + K D++ A + KM+
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 395 ELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWN 454
+ P + YN ++ K+++ L L EMD + PNV TY LI C G W+
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 455 NAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
+A +L+ +M+E K + PN+ + +++ K G+L E+L ++M+ R
Sbjct: 309 DASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 177/368 (48%), Gaps = 2/368 (0%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
DLA L+ M+ +E ++ +I +A++ F M++ G+ P+ V + +
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 200 VSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI 258
+ LC R +A D ++ + P+V+ +++LI + + GK+ AE+++ +M I
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 259 KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
P++ TYS +I+ C ++ A +F MI C PN VT+N+L++ KA R ++ ++
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 319 VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
+F +M + +T+ Y LI + + A V MV GV P+ T++ + +
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 379 KLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVN 438
V A ++ ++ P+ TYNI++ ++ ++ L + V+PNV
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 439 TYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEK 498
TY ++ FC KG A L +EM EE L P+ Y ++ + G EL+ +
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPL-PDSGTYNTLIRAHLRDGDKAASAELIRE 596
Query: 499 MVARGFVS 506
M + FV
Sbjct: 597 MRSCRFVG 604
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 156/339 (46%), Gaps = 1/339 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D ++ + A +L M +G+ T++ LIR G ++A + M
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIE 244
+ + P+ V S ++ + ++ + EA+ +D +K +PD+ Y+SLI+G+C +++
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A+ +F+ M PNV TY+ +I C+ ++ ++F EM G N VT+ +L+
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
+A + VF QM D + Y+ L++ C + +E A+ V + + +
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
P+ T+N + + K V ++ + PN +TY +M F + L
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
+EM E P+ TY LI G + +L++EM
Sbjct: 559 FREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 3/203 (1%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV 194
K + D L M RG+ T++ LI + +A A F +M GV PD +
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
SI++ LC + E A F+ + + + EPD+ Y +I G C+AGK+E ++F +
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRT 313
G+KPNV TY+ ++ CR G A +F EM + G P++ T+N+L+R H++ G
Sbjct: 528 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDK 587
Query: 314 EKVLQVFNQMK--RFNCAADTIG 334
++ +M+ RF A TIG
Sbjct: 588 AASAELIREMRSCRFVGDASTIG 610
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 121/245 (49%), Gaps = 4/245 (1%)
Query: 139 FDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSI 198
D A H+ + M ++ T++ LI+ + +A E + F M G+ + V +
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 199 VVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAG 257
++ + R + AQ F V D PD++ Y+ L+ G C GK+E A +F+ ++ +
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 258 IKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVL 317
++P+++TY+I+I+ +C+ G++ D+F + G PN VT+ ++M + G E+
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 318 QVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCI 377
+F +MK D+ YN LI H RD + + +++ M ++ST +
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV---T 613
Query: 378 AKLHD 382
LHD
Sbjct: 614 NMLHD 618
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 131/284 (46%), Gaps = 1/284 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L D M R ++ T+S LI + EA H F M P+ V + ++
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
C+ +R +E F + R + + YT+LIHG+ +A + + A+ +FK M G+ P
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
++ TYSI++D LC G++ A VF + + P+ T+N ++ KAG+ E +F
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ + + Y ++ CR EEA + M ++G P+S T+N++ +
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRD 584
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
D + + +M+ + + T ++ M + + LK+
Sbjct: 585 GDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSFLKM 628
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
D L++AV + MVK P+ F+ + IAK++ + + +M+ L N T
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
Y+IL+ F + + L + +M + EP++ T L+ FC ++A L+ +MV
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 465 EEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
E +P+ + ++ L + + LV++MV +G
Sbjct: 179 -EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 187/351 (53%), Gaps = 2/351 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+D M G + TF+ LI A+EAV +RM G PD V VV+
Sbjct: 167 AVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVN 226
Query: 202 SLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC++ + A + + ++ + E +V++Y+++I C+ + A +F +M++ G++P
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
NV TYS +I LC G+ + A + ++MI+ NPN VTF++L+ VK G+ K +++
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+M + + + Y+ LI C + L EA ++L LM++K PN T+N++ K
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
V+ ++ +M + + NT+TY L+ F +++ D + K+M V PN+ TY
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKM 491
IL+ C+ G A + E ++ +++P++ Y ++E + KAG+ KM
Sbjct: 467 NILLDGLCKNGKLAKAMVVF-EYLQRSTMEPDIYTYNIMIEGMCKAGKWKM 516
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 195/425 (45%), Gaps = 38/425 (8%)
Query: 101 IPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAET 160
I ++ F + FPS E + ++L K+ FDL + M+ G+ T
Sbjct: 57 IELDDAIGLFGVMAQSRPFPSIIE-FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYT 115
Query: 161 FSVLIRRYVRAGLA-----------------------------------AEAVHAFNRME 185
+++LI + R ++AV ++M
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIE 244
+ G PD V + ++ L +A EA + D + R +PD++ Y ++++G C+ G +
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A + M+ A I+ NV YS VIDSLC+ A ++F EM + G PN +T++SL+
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
GR ++ + M + + ++ LI+ + L +A K+ M+K+ +
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID 355
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
PN T++S+ L + A +M M +CLPN +TYN L+ F ++K +D ++L
Sbjct: 356 PNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
+EM + + N TY LI F + +NA + K+MV + PN+ Y +L+ L
Sbjct: 416 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV-GVHPNILTYNILLDGLC 474
Query: 485 KAGQL 489
K G+L
Sbjct: 475 KNGKL 479
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 1/278 (0%)
Query: 225 PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDV 284
P +I ++ L+ + K + + M+ GI N++TY+I+I+ CRC +++ A +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 285 FAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
+M+ G P+ VT NSL+ R + + +QM DT+ + LI
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
EAV +++ MV++G P+ T+ ++ + K D + A + KM+ N +
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
Y+ ++ + + D L L EM+ V PNV TY LI C G W++A +L+ +M+
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 465 EEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
E K + PNL + +++ K G+L E+L E+M+ R
Sbjct: 316 ERK-INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
D L++A+ + +M + P+ F+ + IAK++ + KM+ L N T
Sbjct: 56 DIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYT 115
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
YNIL+ F + + L L +M + EP++ T L+ FC ++A L+ +MV
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 465 EEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
E KP+ + ++ L + L+++MV RG
Sbjct: 176 -EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG 213
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 189/364 (51%), Gaps = 5/364 (1%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
M+ G+ +A + ++ G T FS LI Y R+GL EA+ FN M++YG
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQ--SFFDSV-KDRFEPDVILYTSLIHGWCRAGKIER 245
+ P+ V + V+ + C K E Q FFD + ++ +PD I + SL+ R G E
Sbjct: 299 LRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 246 AEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMR 305
A +F +M + I+ +V +Y+ ++D++C+ GQ+ A ++ A+M PN V++++++
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 306 VHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
KAGR ++ L +F +M+ A D + YN L+ + + EEA+ +L M G+
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLK 425
+ T+N++ G K + +++ +MK + LPN LTY+ L+ +++ +++
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 426 KEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRK 485
+E + +V Y LI C+ G +A L+ EM +E + PN+ Y ++++ +
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGR 596
Query: 486 AGQL 489
+ +
Sbjct: 597 SATM 600
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 170/359 (47%), Gaps = 20/359 (5%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y +LD K DLA+ ++ M + + ++S +I + +AG EA++ F M
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIE 244
G+A D+V+ + ++S + R+EEA + + DV+ Y +L+ G+ + GK +
Sbjct: 437 YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
+++F +MK + PN+ TYS +ID + G A ++F E AG + V +++L+
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
K G + + ++M + + + + YN +I+ R ++ + N G
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN----GGSL 612
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
P SS+ ++ L + G +R+ +L N T E + +L++
Sbjct: 613 PFSSS------ALSALTETEG-NRVIQLFGQLTTESNNRTTKDCEEGMQE---LSCILEV 662
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELL 483
++M + +++PNV T+ IL C + N+++ ++EE L N +VY V LL
Sbjct: 663 FRKMHQLEIKPNVVTFSA-ILNACSR---CNSFEDASMLLEELRLFDN-KVYGVVHGLL 716
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 161/358 (44%), Gaps = 43/358 (12%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D K FD A +L M+ G+ + +++ L+ Y + G + EA+ M
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIE 244
G+ D V + ++ ++ + +E + F +K + P+++ Y++LI G+ + G +
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A EIF++ K AG++ +V YS +ID+LC+ G + A + EM G +PN VT+NS++
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Query: 305 RVHVKAGRTEK---------------------------VLQVFNQMKRFNCAADTIGYNF 337
++ ++ V+Q+F Q+ + T
Sbjct: 592 DAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTK---- 647
Query: 338 LIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELN 397
+C + L ++V M + + PN TF++I ++ + A + +++ +
Sbjct: 648 --DCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD 705
Query: 398 CLPNTLTYNILM----RMFAESKSI-DMVLKLKKEMDENQVEPNVNTYRILILMFCEK 450
+ + +LM ++ +++S+ D V EMD + N ++ F +K
Sbjct: 706 NKVYGVVHGLLMGQRENVWLQAQSLFDKV----NEMDGSTASAFYNALTDMLWHFGQK 759
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 148/347 (42%), Gaps = 40/347 (11%)
Query: 197 SIVVSSLCRKRRAEEAQSFFD-SVKD--RFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
+ ++ L + ++A F++ +VK R L +++I R GK+ A+ IF+
Sbjct: 200 TYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETA 259
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAV--------------- 298
G V+ +S +I + R G A VF M + G PN V
Sbjct: 260 FAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGME 319
Query: 299 ---------------------TFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNF 337
TFNSL+ V + G E +F++M D YN
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 338 LIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELN 397
L++ C+ ++ A ++L M K + PN +++++ AK + A ++ +M+ L
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 398 CLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAY 457
+ ++YN L+ ++ + + L + +EM ++ +V TY L+ + ++G ++
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 458 KLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
K+ EM E L PNL Y +++ K G K E+ + + G
Sbjct: 500 KVFTEMKREHVL-PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL 545
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 201/420 (47%), Gaps = 37/420 (8%)
Query: 120 PSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVH 179
P+S E Y ++ K + + A ++D M G+ ++ + L+ Y + +A+
Sbjct: 307 PASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALD 366
Query: 180 AFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHG-- 236
FNRME+ G+APDKV S++V C+ E+A F+ +K R P +L ++I G
Sbjct: 367 LFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCL 426
Query: 237 --------------------------------WCRAGKIERAEEIFKDMKDAGIKPNVHT 264
+C+ GK++ A K M+ GI+PNV
Sbjct: 427 KAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVF 486
Query: 265 YSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMK 324
Y+ ++ + CR + A +F+EM++ G PN T++ L+ K + V NQM
Sbjct: 487 YNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMN 546
Query: 325 RFNCAADTIGYNFLIECHCRDENLEEAVKVL-NLMVKKGVAPNSSTFNSIFGCIAKLHDV 383
N A+ + YN +I C+ +A ++L NL+ +K + + +++NSI K+ D
Sbjct: 547 ASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDT 606
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL 443
+ A Y +M E PN +T+ L+ F +S +D+ L++ EM +++ ++ Y L
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGAL 666
Query: 444 ILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
I FC+K AY L E+ E L PN+ VY +++ R G++ +L +KMV G
Sbjct: 667 IDGFCKKNDMKTAYTLFSEL-PELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG 725
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 184/418 (44%), Gaps = 37/418 (8%)
Query: 119 FPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAV 178
F +P + +L+ + + D A M R V + ++ VR+ L EA
Sbjct: 165 FELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAK 224
Query: 179 HAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGW 237
+N+M GVA D V +++ + R+R+ EEA F V R EPD +L++ +
Sbjct: 225 EIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAA 284
Query: 238 CRAGKIERAEEIFKDMKDA-GIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPN 296
C+ + A ++ ++M+ G+ + TY+ VI + + G + A V EM+ G +
Sbjct: 285 CKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMS 344
Query: 297 AVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLN 356
+ SL+ + K K L +FN+M+ A D + ++ ++E C++ +E+A++
Sbjct: 345 VIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYM 404
Query: 357 LMVKKGVAPNS------------------------STF----------NSIFGCIAKLHD 382
M +AP+S +F N IF K
Sbjct: 405 RMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGK 464
Query: 383 VNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRI 442
V+ A M++ PN + YN +M K++D+ + EM E +EPN TY I
Sbjct: 465 VDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSI 524
Query: 443 LILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
LI F + NA+ ++ +M + + N +Y ++ L K GQ +E+++ ++
Sbjct: 525 LIDGFFKNKDEQNAWDVINQM-NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLI 581
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 170/364 (46%), Gaps = 37/364 (10%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
D A + M+ +G+E ++ ++ + R A F+ M + G+ P+ SI+
Sbjct: 466 DAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSIL 525
Query: 200 VSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM-KDAG 257
+ + + + A + + FE + ++Y ++I+G C+ G+ +A+E+ +++ K+
Sbjct: 526 IDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKR 585
Query: 258 IKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVL 317
+ +Y+ +ID + G A + + EM + G +PN VTF SL+ K+ R + L
Sbjct: 586 YSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLAL 645
Query: 318 QVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI---F 374
++ ++MK D Y LI+ C+ +++ A + + + + G+ PN S +NS+ F
Sbjct: 646 EMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGF 705
Query: 375 GCIAKLH--------------------------------DVNGAHRMYAKMKELNCLPNT 402
+ K+ ++N A +Y+++ +L +P+
Sbjct: 706 RNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDE 765
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
+ + +L+ ++ K+ +EM + V PNV Y +I +G+ N A++L E
Sbjct: 766 ILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDE 825
Query: 463 MVEE 466
M+E+
Sbjct: 826 MLEK 829
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 178/401 (44%), Gaps = 38/401 (9%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
D A + + M GV T +L+R +R EAV F R+ G PD + S+
Sbjct: 221 DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLA 280
Query: 200 VSSLC------------RKRRA------------------------EEAQSFFDSVKDRF 223
V + C R+ R EEA D +
Sbjct: 281 VQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFG 340
Query: 224 EP-DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
P VI TSL++G+C+ ++ +A ++F M++ G+ P+ +S++++ C+ ++ +A
Sbjct: 341 IPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAI 400
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
+ + M P++V +++++ +KA E L++FN + A N +
Sbjct: 401 EFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFE-SWIAHGFMCNKIFLLF 459
Query: 343 CRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
C+ ++ A L +M +KG+ PN +N++ ++ +++ A ++++M E PN
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
TY+IL+ F ++K + +M+ + E N Y +I C+ G + A ++++
Sbjct: 520 FTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQN 579
Query: 463 MVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+++EK + Y ++++ K G E +M G
Sbjct: 580 LIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENG 620
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 127/259 (49%), Gaps = 7/259 (2%)
Query: 117 KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYV---RAGL 173
K + S Y ++D K+ D A M G TF+ LI + R L
Sbjct: 584 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL 643
Query: 174 AAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTS 232
A E H ME + D A ++ C+K + A + F + + P+V +Y S
Sbjct: 644 ALEMTHEMKSME---LKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNS 700
Query: 233 LIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAG 292
LI G+ GK++ A +++K M + GI ++ TY+ +ID L + G I A D+++E++D G
Sbjct: 701 LISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLG 760
Query: 293 CNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAV 352
P+ + L+ K G+ K ++ +MK+ + + + Y+ +I H R+ NL EA
Sbjct: 761 IVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAF 820
Query: 353 KVLNLMVKKGVAPNSSTFN 371
++ + M++KG+ + + FN
Sbjct: 821 RLHDEMLEKGIVHDDTVFN 839
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 129/262 (49%), Gaps = 1/262 (0%)
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR 208
+K + ++ +++ +I +V+ G AV + M + G +P+ V + +++ C+ R
Sbjct: 581 IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNR 640
Query: 209 AEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSI 267
+ A +K + D+ Y +LI G+C+ ++ A +F ++ + G+ PNV Y+
Sbjct: 641 MDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNS 700
Query: 268 VIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFN 327
+I G++ A D++ +M++ G + + T+ +++ +K G +++++
Sbjct: 701 LISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLG 760
Query: 328 CAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAH 387
D I + L+ + +A K+L M KK V PN ++++ + ++N A
Sbjct: 761 IVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAF 820
Query: 388 RMYAKMKELNCLPNTLTYNILM 409
R++ +M E + + +N+L+
Sbjct: 821 RLHDEMLEKGIVHDDTVFNLLV 842
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 6/191 (3%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D K A+ L + G+ ++ LI + G A+ + +M
Sbjct: 663 YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMV 722
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIE 244
+ G++ D + ++ L + A + + D PD IL+ L++G + G+
Sbjct: 723 NDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFL 782
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
+A ++ ++MK + PNV YS VI R G + A + EM++ G + FN L+
Sbjct: 783 KASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Query: 305 RVHVKAGRTEK 315
+GR EK
Sbjct: 843 -----SGRVEK 848
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 109/247 (44%), Gaps = 2/247 (0%)
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRT 313
K G + ++ ++++ R ++ A D F M+D P N+++ V++
Sbjct: 161 KRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLI 220
Query: 314 EKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
++ +++N+M A D + L+ R+ EEAVK+ ++ +G P+ F+
Sbjct: 221 DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLA 280
Query: 374 FGCIAKLHDVNGAHRMYAKMK-ELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQ 432
K D+ A + +M+ +L + TY ++ F + +++ +++ EM
Sbjct: 281 VQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFG 340
Query: 433 VEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMH 492
+ +V L+ +C+ A L M EE+ L P+ ++ ++E K +++
Sbjct: 341 IPMSVIAATSLVNGYCKGNELGKALDLFNRM-EEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Query: 493 EELVEKM 499
E +M
Sbjct: 400 IEFYMRM 406
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 83/180 (46%)
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDV 383
KRF +N+L+ + R++ ++ AV LMV + V P N++ + + + +
Sbjct: 161 KRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLI 220
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL 443
+ A +Y KM + + +T +LMR + + +K+ + + EP+ + +
Sbjct: 221 DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLA 280
Query: 444 ILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+ C+ A L++EM + + + + Y +V+ K G ++ ++++MV G
Sbjct: 281 VQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFG 340
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 180/357 (50%), Gaps = 2/357 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D KLR D + L+ SM +G+E +++V+I R G E M
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIE 244
G + D+V + ++ C++ +A + ++ P VI YTSLIH C+AG +
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
RA E M+ G+ PN TY+ ++D + G + A+ V EM D G +P+ VT+N+L+
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
H G+ E + V MK + D + Y+ ++ CR +++EA++V MV+KG+
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
P++ T++S+ + A +Y +M + P+ TY L+ + ++ L+L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
EM E V P+V TY +LI ++ A +L+ ++ E+S+ P+ Y ++E
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV-PSDVTYHTLIE 598
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 211/444 (47%), Gaps = 17/444 (3%)
Query: 64 LTIPDLALEFSRLSAAHPISPS--TARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPS 121
L++ D AL L+ AH P + V++ + I F + N +
Sbjct: 147 LSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE-----NVFKEMLESQV 201
Query: 122 SPEPY-----IEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
SP + I AG + D+A L D M+T+G T++ LI Y + +
Sbjct: 202 SPNVFTYNILIRGFCFAGNI---DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIH 235
M G+ P+ ++ ++V++ LCR+ R +E + R + D + Y +LI
Sbjct: 259 GFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK 318
Query: 236 GWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNP 295
G+C+ G +A + +M G+ P+V TY+ +I S+C+ G + RA + +M G P
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 296 NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVL 355
N T+ +L+ + G + +V +M + + YN LI HC +E+A+ VL
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 356 NLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAES 415
M +KG++P+ +++++ + +DV+ A R+ +M E P+T+TY+ L++ F E
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 416 KSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQV 475
+ L +EM + P+ TY LI +C +G A +L EMV EK + P++
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV-EKGVLPDVVT 557
Query: 476 YENVLELLRKAGQLKMHEELVEKM 499
Y ++ L K + + + L+ K+
Sbjct: 558 YSVLINGLNKQSRTREAKRLLLKL 581
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 135/512 (26%), Positives = 237/512 (46%), Gaps = 46/512 (8%)
Query: 3 FFVKSSVRLHRSLSPLSPTTFKLYSSPASPQHDLIAEKFHTAIKDH----HRKNPN--PD 56
F K+ +R RSLS + +SP L+A+K T +K H H + N P+
Sbjct: 2 FLTKTLIR--RSLSTFA----------SSPSDSLLADKALTFLKRHPYQLHHLSANFTPE 49
Query: 57 AAPPSPTLTIPDLALEFSRLSAAHPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSL 116
AA + D AL L+ A+P T R C I I L
Sbjct: 50 AASNLLLKSQNDQALILKFLNWANPHQFFTLR-----CKCITLHI--------------L 90
Query: 117 KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRG--VEITAETFSVLIRRYVRAGLA 174
F I D+A K + A + S++ T+ F ++++ Y R L
Sbjct: 91 TKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLI 150
Query: 175 AEAVHAFNRMEDYGVAPDKVAVSIVVSSLCR-KRRAEEAQSFF-DSVKDRFEPDVILYTS 232
+A+ + + +G P ++ + V+ + R KR A++ F + ++ + P+V Y
Sbjct: 151 DKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNI 210
Query: 233 LIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAG 292
LI G+C AG I+ A +F M+ G PNV TY+ +ID C+ +I + M G
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 293 CNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAV 352
PN +++N ++ + GR ++V V +M R + D + YN LI+ +C++ N +A+
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 353 KVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMF 412
+ M++ G+ P+ T+ S+ + K ++N A +M+ PN TY L+ F
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 413 AESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPN 472
++ ++ ++ +EM++N P+V TY LI C G +A ++++M +EK L P+
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPD 449
Query: 473 LQVYENVLELLRKAGQ----LKMHEELVEKMV 500
+ Y VL ++ L++ E+VEK +
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 180/357 (50%), Gaps = 17/357 (4%)
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR 208
M G+ + T++ LI +AG A+ ++M G+ P++ + +V +K
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 209 AEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSI 267
EA + D F P V+ Y +LI+G C GK+E A + +DMK+ G+ P+V +YS
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 268 VIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFN 327
V+ CR + A V EM++ G P+ +T++SL++ + RT++ ++ +M R
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 328 CAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAH 387
D Y LI +C + +LE+A+++ N MV+KGV P+ T++ + + K A
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 388 RMYAKMKELNCLPNTLTYNILMRMFA--ESKSIDMVLK---LKKEMDE-NQV-------- 433
R+ K+ +P+ +TY+ L+ + E KS+ ++K +K M E +QV
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 434 -EPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQL 489
+P+ Y I+I C G AY L KEMV+ L + V +++ L K G++
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIA-LVKALHKEGKV 691
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 144/311 (46%), Gaps = 16/311 (5%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A +++ MK +G+ ++S ++ + R+ EA+ M + G+ PD + S ++
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 202 SLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
C +RR +EA ++ ++ PD YT+LI+ +C G +E+A ++ +M + G+ P
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFN---------------SLMR 305
+V TYS++I+ L + + A + ++ P+ VT++ SL++
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613
Query: 306 VHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
G + QVF M N D YN +I HCR ++ +A + MVK G
Sbjct: 614 GFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLL 673
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLK 425
++ T ++ + K VN + + + L +L+ + ++D+VL +
Sbjct: 674 HTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVL 733
Query: 426 KEMDENQVEPN 436
EM ++ PN
Sbjct: 734 AEMAKDGFLPN 744
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 131/301 (43%), Gaps = 44/301 (14%)
Query: 210 EEAQSFFDSVKDRFEPDVILYTS-----LIHGWCRAGKIERAEEIFKDMKDAGIKPNVHT 264
E A F S+++ + D+ TS ++ + R I++A I + G P V +
Sbjct: 114 EYASLVFKSLQETY--DLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLS 171
Query: 265 YSIVIDSLCRCGQ-ITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
Y+ V+D+ R + I+ A +VF EM+++ +PN T
Sbjct: 172 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFT------------------------ 207
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDV 383
YN LI C N++ A+ + + M KG PN T+N++ KL +
Sbjct: 208 -----------YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL 443
+ ++ M PN ++YN+++ + V + EM+ + TY L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 444 ILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
I +C++G+++ A + EM+ L P++ Y +++ + KAG + E +++M RG
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRH-GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 504 F 504
Sbjct: 376 L 376
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 185/368 (50%), Gaps = 10/368 (2%)
Query: 105 QSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVE--ITAETFS 162
Q+ FF WA S + S Y M+D+ GK R+FDL W L++ M +T +T S
Sbjct: 148 QAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMS 207
Query: 163 VLIRRYVRAGLAAEAVHAFNRME-DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD 221
++RR ++G +AV AF ME YGV D +A++ ++ +L ++ E A F + D
Sbjct: 208 KVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD 267
Query: 222 RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRA 281
+PD + LIHG+C+A K + A + MK P+V TY+ +++ C+ G R
Sbjct: 268 TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRV 327
Query: 282 HDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIEC 341
+++ EM + GCNPN VT+ +M K+ + + L V+ +MK C D Y+ LI
Sbjct: 328 NEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHI 387
Query: 342 HCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNG--AHRMYAKMKE---L 396
+ ++A ++ M +GV + +N++ A LH A R+ +M++
Sbjct: 388 LSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMIS--AALHHSRDEMALRLLKRMEDEEGE 445
Query: 397 NCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNA 456
+C PN TY L++M K + ++ L M +N V +V+TY +LI C G A
Sbjct: 446 SCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEA 505
Query: 457 YKLMKEMV 464
+E V
Sbjct: 506 CLFFEEAV 513
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 63/305 (20%)
Query: 217 DSVKDRFEPDVILYTSLI--------HGWCRA-GKIERAEEIFKDMKDAGIKPNVHTYSI 267
D VK+ + DV++ SL+ +GW +A G A G + HTY+
Sbjct: 118 DVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWAN------SQTGYVHSGHTYNA 171
Query: 268 VIDSLCRCGQITRAHDVFAEMIDAGCNPNA----VTFNSL---MRVHVKAGRTEKVLQVF 320
++D L +C R D+ E+++ N N VT +++ MR K+G+ K + F
Sbjct: 172 MVDVLGKC----RNFDLMWELVNE-MNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAF 226
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+M++ GV ++ NS+ + K
Sbjct: 227 LEMEK----------------------------------SYGVKTDTIAMNSLMDALVKE 252
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
+ + AH ++ K+ + P+ T+NIL+ F +++ D + M + P+V TY
Sbjct: 253 NSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTY 311
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
+ +C++G + ++++EM E PN+ Y V+ L K+ Q+ + EKM
Sbjct: 312 TSFVEAYCKEGDFRRVNEMLEEM-RENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMK 370
Query: 501 ARGFV 505
G V
Sbjct: 371 EDGCV 375
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 220/451 (48%), Gaps = 68/451 (15%)
Query: 80 HPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHF 139
HP + V++ I+ +P L FF+W ++ K F + + ML+ G+ R+
Sbjct: 61 HPSQTISRTTVLQTLRLIK--VP-ADGLRFFDWVSN-KGFSHKEQSFFLMLEFLGRARNL 116
Query: 140 DLAWHLIDSMKTRG---VEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
++A + + S++ R V++ F+ LIR Y AGL E+V F M+ G++P +
Sbjct: 117 NVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTF 176
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVKDRF--EPDVILYTSLIHGWCRAGKIERAEEIFKDMK 254
+ ++S L ++ R A FD ++ + PD + +LI+G+C+ ++ A IFKDM+
Sbjct: 177 NSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDME 236
Query: 255 DAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCN--PNAVTFNSLMRVHVKAGR 312
P+V TY+ +ID LCR G++ AH+V + M+ + PN V++ +L+R
Sbjct: 237 LYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVR------- 289
Query: 313 TEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNS 372
GY C + ++EAV V + M+ +G+ PN+ T+N+
Sbjct: 290 ---------------------GY-------CMKQEIDEAVLVFHDMLSRGLKPNAVTYNT 321
Query: 373 IFGCIAKLHDVNGAHRMYAKMKEL---------NCLPNTLTYNILMRMFAESKSIDMVLK 423
+ +++ AHR Y ++K++ P+ T+NIL++ ++ +D +K
Sbjct: 322 LIKGLSE------AHR-YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMK 374
Query: 424 LKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSL------KPNLQVYE 477
+ +EM ++ P+ +Y +LI C + ++ A L E+ E++ L KP Y
Sbjct: 375 VFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYN 434
Query: 478 NVLELLRKAGQLKMHEELVEKMVARGFVSRP 508
+ E L G+ K E++ +++ RG P
Sbjct: 435 PMFEYLCANGKTKQAEKVFRQLMKRGVQDPP 465
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 179/428 (41%), Gaps = 71/428 (16%)
Query: 127 IEMLDLAGKLRHFDLAWHLIDSMKTRGVEI--TAETFSVLIRRYVRAGLAAEAVHAFNRM 184
I+ L AGK++ +A +++ M + ++ +++ L+R Y EAV F+ M
Sbjct: 251 IDGLCRAGKVK---IAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDM 307
Query: 185 EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD---RFEPDVILYTSLIHGWCRAG 241
G+ P+ V + ++ L R +E + D F PD + LI C AG
Sbjct: 308 LSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAG 367
Query: 242 KIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAG-------CN 294
++ A ++F++M + + P+ +YS++I +LC + RA +F E+ + C
Sbjct: 368 HLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECK 427
Query: 295 PNAVTFNSLMRVHVKAGRTEKVLQVFNQ-MKRFNCAADTIGYNFLIECHCRDENLEEAVK 353
P A +N + G+T++ +VF Q MKR D Y LI HCR+ + A +
Sbjct: 428 PLAAAYNPMFEYLCANGKTKQAEKVFRQLMKR--GVQDPPSYKTLITGHCREGKFKPAYE 485
Query: 354 VLNLMVKKGVAPN-----------------------------------SSTFNSIFGCIA 378
+L LM+++ P+ ++TF+S+ +A
Sbjct: 486 LLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELA 545
Query: 379 KLHDVNGAHRMYAKMKELNCLPNT-LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNV 437
K N + + M E N L+ ++ +F+ ++ L ++ D
Sbjct: 546 KRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYD-------- 597
Query: 438 NTYRI----LILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELL----RKAGQL 489
N Y + L+ CE +A+ L+ EKS ++ V+E L R +
Sbjct: 598 NGYLVKMEELLGYLCENRKLLDAHTLVL-FCLEKSQMVDIDTCNTVIEGLCKHKRHSEAF 656
Query: 490 KMHEELVE 497
++ ELVE
Sbjct: 657 SLYNELVE 664
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 183/349 (52%), Gaps = 2/349 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+D M G + TF+ LI A+EAV ++M G PD V VV+
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 202 SLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC++ + A + + ++ R + +V+++ ++I C+ +E A ++F +M+ GI+P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
NV TY+ +I+ LC G+ + A + + M++ NPN VTFN+L+ K G+ + ++
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+M + + DTI YN LI C L+EA ++ MV K PN T+N++ K
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
V ++ +M + + NT+TY +++ F ++ D + K+M N+V ++ TY
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQL 489
IL+ C G + A + K + ++ ++ N+ +Y ++E + KAG++
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYL-QKSEMELNIFIYNTMIEGMCKAGKV 519
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 199/408 (48%), Gaps = 8/408 (1%)
Query: 108 AFFNWATSL---KNFPSSPEPYIEMLD--LAGKLRHFDLAWHLIDSMKTRGVEITAETFS 162
+FFN S ++F S+ Y E+L L+ ++ D D +K+R E F+
Sbjct: 29 SFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVE-FN 87
Query: 163 VLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KD 221
L+ + + +M+ G++ D SI ++ CR+ + A + + K
Sbjct: 88 KLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL 147
Query: 222 RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRA 281
+EPD++ +SL++G+C + +I A + M + G KP+ T++ +I L + + A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 282 HDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIEC 341
+ +M+ GC P+ VT+ +++ K G + L + N+M+ A+ + +N +I+
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Query: 342 HCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPN 401
C+ ++E AV + M KG+ PN T+NS+ C+ + A R+ + M E PN
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 327
Query: 402 TLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMK 461
+T+N L+ F + + KL +EM + ++P+ TY +LI FC + A ++ K
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Query: 462 EMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVSRPL 509
MV + L PN+Q Y ++ K +++ EL +M RG V +
Sbjct: 388 FMVSKDCL-PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 175/363 (48%), Gaps = 5/363 (1%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+D M RG + T+ ++ + G A++ N+ME + + V + ++
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
SLC+ R E A F ++ + P+V+ Y SLI+ C G+ A + +M + I P
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
NV T++ +ID+ + G++ A + EMI +P+ +T+N L+ R ++ Q+F
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
M +C + YN LI C+ + +E+ V++ M ++G+ N+ T+ +I +
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
D + A ++ +M + +TY+IL+ +D L + K + ++++E N+ Y
Sbjct: 447 GDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIY 506
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
+I C+ G A+ L + S+KP++ Y ++ L L+ ++L KM
Sbjct: 507 NTMIEGMCKAGKVGEAWDLFCSL----SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMK 562
Query: 501 ARG 503
G
Sbjct: 563 EDG 565
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 163/339 (48%), Gaps = 10/339 (2%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
++D K RH ++A L M+T+G+ T++ LI G ++A + M +
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAE 247
+ P+ V + ++ + ++ + EA+ + + R +PD I Y LI+G+C +++ A+
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
++FK M PN+ TY+ +I+ C+C ++ ++F EM G N VT+ ++++
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
+AG + VF QM D + Y+ L+ C L+ A+ + + K + N
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNI 503
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKE 427
+N++ + K V A ++ L+ P+ +TYN ++ + + L ++
Sbjct: 504 FIYNTMIEGMCKAGKVGEAWDLFC---SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRK 560
Query: 428 MDENQVEPNVNTYRILI---LMFCEKGHWNNAYKLMKEM 463
M E+ PN TY LI L C++ + +L+KEM
Sbjct: 561 MKEDGTLPNSGTYNTLIRANLRDCDRAA---SAELIKEM 596
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 98/223 (43%), Gaps = 10/223 (4%)
Query: 93 KCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTR 152
KC + G+ ++ ++ + + + + + + D D A + M +
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC-------DSAQMVFKQMVSN 462
Query: 153 GVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA 212
V T+S+L+ G A+ F ++ + + + ++ +C+ + EA
Sbjct: 463 RVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA 522
Query: 213 QSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSL 272
F S+ +PDV+ Y ++I G C ++ A+++F+ MK+ G PN TY+ +I +
Sbjct: 523 WDLFCSLS--IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRAN 580
Query: 273 CRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEK 315
R + ++ EM +G +A T SL+ + GR +K
Sbjct: 581 LRDCDRAASAELIKEMRSSGFVGDASTI-SLVTNMLHDGRLDK 622
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 185/364 (50%), Gaps = 3/364 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A +++ M + G+ +TF+ +++ Y+ G A+ +M ++G + V+V+++V
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 202 SLCRKRRAEEAQSFFD--SVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIK 259
C++ R E+A +F S +D F PD + +L++G C+AG ++ A EI M G
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 260 PNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV 319
P+V+TY+ VI LC+ G++ A +V +MI C+PN VT+N+L+ K + E+ ++
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 320 FNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAK 379
+ D +N LI+ C N A+++ M KG P+ T+N + +
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 380 LHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNT 439
++ A M +M+ C + +TYN L+ F ++ ++ EM+ + V N T
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507
Query: 440 YRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
Y LI C+ +A +LM +M+ E KP+ Y ++L + G +K ++V+ M
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 500 VARG 503
+ G
Sbjct: 567 TSNG 570
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 118/505 (23%), Positives = 227/505 (44%), Gaps = 78/505 (15%)
Query: 74 SRLSAAHPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLA 133
S +S A P S + + ++ ++R +L FN A+ NF P Y E+L
Sbjct: 34 STISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRL 93
Query: 134 GKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAV--------------- 178
G+ FD +++ MK+ E+ TF +LI Y + L E +
Sbjct: 94 GRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPD 153
Query: 179 -HAFNRMED--------------------YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFD 217
H +NRM + +G+ PD ++++ +LCR + A +
Sbjct: 154 THFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLE 213
Query: 218 SVKD-RFEPDVILYTS-----------------------------------LIHGWCRAG 241
+ PD +T+ ++HG+C+ G
Sbjct: 214 DMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEG 273
Query: 242 KIERAEEIFKDMKDA-GIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTF 300
++E A ++M + G P+ +T++ +++ LC+ G + A ++ M+ G +P+ T+
Sbjct: 274 RVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTY 333
Query: 301 NSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVK 360
NS++ K G ++ ++V +QM +C+ +T+ YN LI C++ +EEA ++ ++
Sbjct: 334 NSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTS 393
Query: 361 KGVAPNSSTFNSIFG--CIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSI 418
KG+ P+ TFNS+ C+ + H V A ++ +M+ C P+ TYN+L+ +
Sbjct: 394 KGILPDVCTFNSLIQGLCLTRNHRV--AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 419 DMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYEN 478
D L + K+M+ + +V TY LI FC+ A ++ EM E + N Y
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM-EVHGVSRNSVTYNT 510
Query: 479 VLELLRKAGQLKMHEELVEKMVARG 503
+++ L K+ +++ +L+++M+ G
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEG 535
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 190/375 (50%), Gaps = 5/375 (1%)
Query: 133 AGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPD 192
AG ++H A ++D M G + T++ +I + G EAV ++M +P+
Sbjct: 308 AGHVKH---AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 193 KVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFK 251
V + ++S+LC++ + EEA + + PDV + SLI G C A E+F+
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 252 DMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAG 311
+M+ G +P+ TY+++IDSLC G++ A ++ +M +GC + +T+N+L+ KA
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 312 RTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFN 371
+T + ++F++M+ + +++ YN LI+ C+ +E+A ++++ M+ +G P+ T+N
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 372 SIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDEN 431
S+ + D+ A + M C P+ +TY L+ ++ +++ KL + +
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 432 QVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE-LLRKAGQLK 490
+ + Y +I K A L +EM+E+ P+ Y V L G ++
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIR 664
Query: 491 MHEELVEKMVARGFV 505
+ + +++ +GFV
Sbjct: 665 EAVDFLVELLEKGFV 679
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 122/247 (49%), Gaps = 6/247 (2%)
Query: 127 IEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMED 186
I+ L GKL D A +++ M+ G + T++ LI + +A EA F+ ME
Sbjct: 442 IDSLCSKGKL---DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Query: 187 YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIER 245
+GV+ + V + ++ LC+ RR E+A D + + +PD Y SL+ +CR G I++
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKK 558
Query: 246 AEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMR 305
A +I + M G +P++ TY +I LC+ G++ A + + G N +N +++
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ 618
Query: 306 VHVKAGRTEKVLQVFNQMKRFNCA-ADTIGYNFLIECHCRDEN-LEEAVKVLNLMVKKGV 363
+ +T + + +F +M N A D + Y + C + EAV L +++KG
Sbjct: 619 GLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678
Query: 364 APNSSTF 370
P S+
Sbjct: 679 VPEFSSL 685
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 125/288 (43%), Gaps = 36/288 (12%)
Query: 218 SVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQ 277
S K F P+ LY ++ R+G + ++I +DMK + + T+ I+I+S +
Sbjct: 74 SKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFEL 133
Query: 278 ITRAHDVFAEMIDA-GCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYN 336
V MID G P+ +N ++ + V G + K++++
Sbjct: 134 QDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVD-GNSLKLVEI----------------- 175
Query: 337 FLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKEL 396
H + M G+ P+ STFN + + + H + A M M
Sbjct: 176 ----SHAK-------------MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSY 218
Query: 397 NCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNA 456
+P+ T+ +M+ + E +D L+++++M E + + +++ FC++G +A
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA 278
Query: 457 YKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
++EM + P+ + ++ L KAG +K E+++ M+ G+
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 10/210 (4%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D K R + A L+D M G + T++ L+ + R G +A M
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR---FEPDVILYTSLIHGWCRAGK 242
G PD V ++S LC+ R E A S++ + P Y +I G R K
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA--YNPVIQGLFRKRK 625
Query: 243 IERAEEIFKDMKDAG-IKPNVHTYSIVIDSLCRCGQ-ITRAHDVFAEMIDAGCNPNAVTF 300
A +F++M + P+ +Y IV LC G I A D E+++ G P +
Sbjct: 626 TTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSL 685
Query: 301 NSLMRVHVKAGRTEKVLQVFN---QMKRFN 327
L + E ++++ N Q RF+
Sbjct: 686 YMLAEGLLTLSMEETLVKLVNMVMQKARFS 715
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 180/336 (53%), Gaps = 2/336 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+D M G + T T + L+ G ++AV +RM + G P++V V++
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
+C+ + A +++R + D + Y+ +I G C+ G ++ A +F +M+ G K
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
++ TY+ +I C G+ + +MI +PN VTF+ L+ VK G+ + Q+
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+M + A +TI YN LI+ C++ LEEA+++++LM+ KG P+ TFN + K
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
+ ++ ++ +M + NT+TYN L++ F +S +++ KL +EM +V P++ +Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVY 476
+IL+ C+ G A ++ + +E+ ++ ++ +Y
Sbjct: 477 KILLDGLCDNGELEKALEIFGK-IEKSKMELDIGIY 511
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 193/372 (51%), Gaps = 2/372 (0%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
M++ + R A+ + + G E F+ L+ +EA+ +RM + G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAE 247
P + ++ +V+ LC + +A D V+ F+P+ + Y +++ C++G+ A
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
E+ + M++ IK + YSI+ID LC+ G + A ++F EM G + +T+N+L+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
AGR + ++ M + + + + ++ LI+ ++ L EA ++L M+++G+APN+
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKE 427
T+NS+ K + + A +M M C P+ +T+NIL+ + ++ ID L+L +E
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 428 MDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
M V N TY L+ FC+ G A KL +EMV + ++P++ Y+ +L+ L G
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR-VRPDIVSYKILLDGLCDNG 487
Query: 488 QLKMHEELVEKM 499
+L+ E+ K+
Sbjct: 488 ELEKALEIFGKI 499
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 187/363 (51%), Gaps = 2/363 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A LID M G + T+ ++ ++G A A+ +ME+ + D V SI++
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC+ + A + F+ ++ + F+ D+I Y +LI G+C AG+ + ++ +DM I P
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
NV T+S++IDS + G++ A + EM+ G PN +T+NSL+ K R E+ +Q+
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ M C D + +N LI +C+ +++ +++ M +GV N+ T+N++ +
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
+ A +++ +M P+ ++Y IL+ ++ ++ L++ +++++++E ++ Y
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
I+I C ++A+ L + K +K + + Y ++ L + L + L KM
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSL-PLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 501 ARG 503
G
Sbjct: 571 EEG 573
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 166/325 (51%), Gaps = 2/325 (0%)
Query: 183 RMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAG 241
+ME G+A +SI+++ CR R+ A S + K +EPD +++ +L++G C
Sbjct: 113 QMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 242 KIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFN 301
++ A E+ M + G KP + T + +++ LC G+++ A + M++ G PN VT+
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 302 SLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKK 361
++ V K+G+T +++ +M+ N D + Y+ +I+ C+D +L+ A + N M K
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 362 GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMV 421
G + T+N++ G + ++ M + PN +T+++L+ F + +
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 422 LKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
+L KEM + + PN TY LI FC++ A +++ M+ K P++ + ++
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI-SKGCDPDIMTFNILIN 411
Query: 482 LLRKAGQLKMHEELVEKMVARGFVS 506
KA ++ EL +M RG ++
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIA 436
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 182/410 (44%), Gaps = 10/410 (2%)
Query: 55 PDAAPPSPTLTI------PDLALEFSRLSAAHPISPSTARRVIEKCGAIRHGIPFYQSLA 108
P+ P L + LA+E R I + I G + G +
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG-SLDNAFN 284
Query: 109 FFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRY 168
FN +K F + Y ++ +D L+ M R + TFSVLI +
Sbjct: 285 LFN-EMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343
Query: 169 VRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFD-SVKDRFEPDV 227
V+ G EA M G+AP+ + + ++ C++ R EEA D + +PD+
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Query: 228 ILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAE 287
+ + LI+G+C+A +I+ E+F++M G+ N TY+ ++ C+ G++ A +F E
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDEN 347
M+ P+ V++ L+ G EK L++F ++++ D Y +I C
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASK 523
Query: 348 LEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNI 407
+++A + + KGV ++ +N + + + ++ A ++ KM E P+ LTYNI
Sbjct: 524 VDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNI 583
Query: 408 LMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAY 457
L+R +L +EM + +V+T +++I M G + ++
Sbjct: 584 LIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-SSGELDKSF 632
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 151/298 (50%), Gaps = 2/298 (0%)
Query: 208 RAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYS 266
+A++A F D ++ R P VI + L + + E + K M+ GI +++T S
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 267 IVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF 326
I+I+ CRC +++ A +++ G P+ V FN+L+ R + L++ ++M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 327 NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGA 386
I N L+ C + + +AV +++ MV+ G PN T+ + + K A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 387 HRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILM 446
+ KM+E N + + Y+I++ + S+D L EM+ + ++ TY LI
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 447 FCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
FC G W++ KL+++M++ K + PN+ + +++ K G+L+ ++L+++M+ RG
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRK-ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 180/340 (52%), Gaps = 2/340 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+D M G + T + L+ +G AEA+ ++M +YG P+ V V++
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
+C+ + A +++R + D + Y+ +I G C+ G ++ A +F +M+ GI
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
N+ TY+I+I C G+ + +MI NPN VTF+ L+ VK G+ + ++
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+M A DTI Y LI+ C++ +L++A ++++LMV KG PN TFN + K
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
+ ++ ++ KM + +T+TYN L++ F E +++ +L +EM +V PN+ TY
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVL 480
+IL+ C+ G A ++ E +E+ ++ ++ +Y ++
Sbjct: 477 KILLDGLCDNGESEKALEIF-EKIEKSKMELDIGIYNIII 515
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 192/372 (51%), Gaps = 2/372 (0%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
M++ + R LA+ + + G E TFS LI G +EA+ +RM + G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAE 247
PD + ++ +V+ LC + EA D V+ +P+ + Y +++ C++G+ A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
E+ + M++ IK + YSI+ID LC+ G + A ++F EM G N +T+N L+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
AGR + ++ M + + + ++ LI+ ++ L EA ++ M+ +G+AP++
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKE 427
T+ S+ K + ++ A++M M C PN T+NIL+ + ++ ID L+L ++
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 428 MDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
M V + TY LI FCE G N A +L +EMV K + PN+ Y+ +L+ L G
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK-VPPNIVTYKILLDGLCDNG 487
Query: 488 QLKMHEELVEKM 499
+ + E+ EK+
Sbjct: 488 ESEKALEIFEKI 499
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 184/380 (48%), Gaps = 2/380 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y +L++ K LA L+ M+ R +++ A +S++I + G A + FN ME
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIE 244
G+ + + +I++ C R ++ D +K + P+V+ ++ LI + + GK+
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
AEE+ K+M GI P+ TY+ +ID C+ + +A+ + M+ GC+PN TFN L+
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
+ KA R + L++F +M ADT+ YN LI+ C L A ++ MV + V
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 470
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
PN T+ + + + A ++ K+++ + YNI++ + +D L
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
+ V+P V TY I+I C+KG + A L ++M EE P+ Y ++
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM-EEDGHAPDGWTYNILIRAHL 589
Query: 485 KAGQLKMHEELVEKMVARGF 504
G +L+E++ GF
Sbjct: 590 GDGDATKSVKLIEELKRCGF 609
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 171/325 (52%), Gaps = 2/325 (0%)
Query: 183 RMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAG 241
+ME G+A + +SI+++ CR R+ A S + K +EP+ I +++LI+G C G
Sbjct: 113 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 172
Query: 242 KIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFN 301
++ A E+ M + G KP++ T + +++ LC G+ A + +M++ GC PNAVT+
Sbjct: 173 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 232
Query: 302 SLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKK 361
++ V K+G+T +++ +M+ N D + Y+ +I+ C+ +L+ A + N M K
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
Query: 362 GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMV 421
G+ N T+N + G + ++ M + PN +T+++L+ F + +
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 422 LKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
+L KEM + P+ TY LI FC++ H + A +++ MV K PN++ + ++
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV-SKGCDPNIRTFNILIN 411
Query: 482 LLRKAGQLKMHEELVEKMVARGFVS 506
KA ++ EL KM RG V+
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVA 436
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 179/400 (44%), Gaps = 9/400 (2%)
Query: 55 PDAAPPSPTLTI------PDLALEFSRLSAAHPISPSTARRVIEKCGAIRHGIPFYQSLA 108
P+A P L + LA+E R I + I G +HG +
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG-SLDNAFN 284
Query: 109 FFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRY 168
FN +K ++ Y ++ +D L+ M R + TFSVLI +
Sbjct: 285 LFN-EMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 169 VRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFD-SVKDRFEPDV 227
V+ G EA M G+APD + + ++ C++ ++A D V +P++
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 228 ILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAE 287
+ LI+G+C+A +I+ E+F+ M G+ + TY+ +I C G++ A ++F E
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDEN 347
M+ PN VT+ L+ G +EK L++F ++++ D YN +I C
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523
Query: 348 LEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNI 407
+++A + + KGV P T+N + G + K ++ A ++ KM+E P+ TYNI
Sbjct: 524 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNI 583
Query: 408 LMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMF 447
L+R +KL +E+ + +T +++I M
Sbjct: 584 LIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 152/298 (51%), Gaps = 2/298 (0%)
Query: 208 RAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYS 266
+A++A F D + R P VI ++ L + + + + K M+ GI N++T S
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 267 IVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF 326
I+I+ CRC ++ A ++I G PN +TF++L+ GR + L++ ++M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 327 NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGA 386
D I N L+ C EA+ +++ MV+ G PN+ T+ + + K A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 387 HRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILM 446
+ KM+E N + + Y+I++ + S+D L EM+ + N+ TY ILI
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 447 FCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
FC G W++ KL+++M++ K + PN+ + +++ K G+L+ EEL ++M+ RG
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRK-INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 185/363 (50%), Gaps = 2/363 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+D M G TF+ LI A+EAV +RM G P+ V +VV+
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 202 SLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC++ + A + + ++ + E DV+++ ++I C+ ++ A +FK+M+ GI+P
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 293
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
NV TYS +I LC G+ + A + ++MI+ NPN VTFN+L+ VK G+ + +++
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ M + + D YN L+ C + L++A ++ MV K P+ T+N++ K
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
V ++ +M + +T+TY L++ D K+ K+M + V P++ TY
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 473
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
IL+ C G A ++ M ++ +K ++ +Y ++E + KAG++ +L +
Sbjct: 474 SILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 501 ARG 503
+G
Sbjct: 533 LKG 535
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 177/368 (48%), Gaps = 2/368 (0%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
DLA +L++ M+ +E F+ +I + +A++ F ME G+ P+ V S +
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 200 VSSLCRKRRAEEA-QSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI 258
+S LC R +A Q D ++ + P+++ + +LI + + GK AE+++ DM I
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 259 KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
P++ TY+ +++ C ++ +A +F M+ C P+ VT+N+L++ K+ R E +
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 319 VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
+F +M DT+ Y LI+ D + + A KV MV GV P+ T++ + +
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 379 KLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVN 438
+ A ++ M++ + Y ++ ++ +D L + V+PNV
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 439 TYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEK 498
TY +I C K AY L+K+M E+ L PN Y ++ + G EL+ +
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PNSGTYNTLIRAHLRDGDKAASAELIRE 600
Query: 499 MVARGFVS 506
M + FV
Sbjct: 601 MRSCRFVG 608
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 202/438 (46%), Gaps = 40/438 (9%)
Query: 99 HGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITA 158
H + ++ F + PS E + ++L K++ FD+ L + M+ +
Sbjct: 62 HDMKLDDAIGLFGGMVKSRPLPSIVE-FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL 120
Query: 159 ETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS 218
T+++LI + R + A+ +M G P V +S +++ C +R +A + D
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 219 -VKDRFEPDVILYTSLIH-----------------------------------GWCRAGK 242
V+ + PD I +T+LIH G C+ G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 243 IERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNS 302
+ A + M+ A I+ +V ++ +IDSLC+ + A ++F EM G PN VT++S
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 303 LMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKG 362
L+ GR Q+ + M + + +N LI+ ++ EA K+ + M+K+
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 363 VAPNSSTFNSIFGCIAKLHD-VNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMV 421
+ P+ T+NS+ +HD ++ A +M+ M +C P+ +TYN L++ F +SK ++
Sbjct: 361 IDPDIFTYNSLVNGFC-MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 422 LKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
+L +EM + + TY LI G +NA K+ K+MV + + P++ Y +L+
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLD 478
Query: 482 LLRKAGQLKMHEELVEKM 499
L G+L+ E+ + M
Sbjct: 479 GLCNNGKLEKALEVFDYM 496
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 163/336 (48%), Gaps = 1/336 (0%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
++D K RH D A +L M+T+G+ T+S LI G ++A + M +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAE 247
+ P+ V + ++ + ++ + EA+ +D +K +PD+ Y SL++G+C ++++A+
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
++F+ M P+V TY+ +I C+ ++ ++F EM G + VT+ +L++
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
G + +VF QM D + Y+ L++ C + LE+A++V + M K + +
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKE 427
+ ++ + K V+ ++ + PN +TYN ++ + + L K+
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 428 MDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
M E+ PN TY LI G + +L++EM
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 157/311 (50%), Gaps = 2/311 (0%)
Query: 197 SIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD 255
+I+++ CR+ + A + + K +EP ++ +SL++G+C +I A + M +
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 256 AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEK 315
G +P+ T++ +I L + + A + M+ GC PN VT+ ++ K G T+
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 316 VLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFG 375
L + N+M+ AD + +N +I+ C+ ++++A+ + M KG+ PN T++S+
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 376 CIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEP 435
C+ + A ++ + M E PN +T+N L+ F + KL +M + ++P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 436 NVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEEL 495
++ TY L+ FC + A ++ + MV K P++ Y +++ K+ +++ EL
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMV-SKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 496 VEKMVARGFVS 506
+M RG V
Sbjct: 423 FREMSHRGLVG 433
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 145/296 (48%), Gaps = 2/296 (0%)
Query: 208 RAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYS 266
+ ++A F VK R P ++ + L+ + K + + + M+ I ++TY+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 267 IVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF 326
I+I+ CR QI+ A + +M+ G P+ VT +SL+ + R + + +QM
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 327 NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGA 386
DTI + LI EAV +++ MV++G PN T+ + + K D + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 387 HRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILM 446
+ KM+ + + +N ++ + + +D L L KEM+ + PNV TY LI
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 447 FCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
C G W++A +L+ +M+E+K + PNL + +++ K G+ E+L + M+ R
Sbjct: 305 LCSYGRWSDASQLLSDMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 144/335 (42%), Gaps = 14/335 (4%)
Query: 96 AIRHGIPFYQSL-----AFFNWATSLKNFPSSPEPYIE--------MLDLAGKLRHFDLA 142
IR + Y SL ++ W+ + + E I ++D K F A
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 143 WHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSS 202
L D M R ++ T++ L+ + +A F M PD V + ++
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 203 LCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPN 261
C+ +R E+ F + R D + YT+LI G G + A+++FK M G+ P+
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 262 VHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFN 321
+ TYSI++D LC G++ +A +VF M + + + +++ KAG+ + +F
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 322 QMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLH 381
+ + + YN +I C L+EA +L M + G PNS T+N++ +
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Query: 382 DVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESK 416
D + + +M+ + + T ++ M + +
Sbjct: 590 DKAASAELIREMRSCRFVGDASTIGLVANMLHDGR 624
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
D L++A+ + MVK P+ FN + IAK+ + + KM+ L + T
Sbjct: 63 DMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYT 122
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
YNIL+ F I + L L +M + EP++ T L+ +C ++A L+ +MV
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 465 EEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
E +P+ + ++ L + LV++MV RG
Sbjct: 183 -EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 186/350 (53%), Gaps = 2/350 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A+ ++ + G E TF+ LI+ G +EAV +RM + G PD V + +V+
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
+CR A +++R + DV Y+++I CR G I+ A +FK+M+ GIK
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+V TY+ ++ LC+ G+ + +M+ PN +TFN L+ V VK G+ ++ +++
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+M + + I YN L++ +C L EA +L+LMV+ +P+ TF S+ +
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
V+ +++ + + + N +TY+IL++ F +S I + +L +EM + V P+V TY
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK 490
IL+ C+ G A ++ +++ + K + + +Y ++E + K G+++
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSK-MDLGIVMYTTIIEGMCKGGKVE 490
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 192/378 (50%), Gaps = 5/378 (1%)
Query: 127 IEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMED 186
I+ L L GK+ A L+D M G + T++ ++ R+G + A+ +ME+
Sbjct: 165 IKGLFLEGKVSE---AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 221
Query: 187 YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIER 245
V D S ++ SLCR + A S F ++ + + V+ Y SL+ G C+AGK
Sbjct: 222 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 246 AEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMR 305
+ KDM I PNV T+++++D + G++ A++++ EMI G +PN +T+N+LM
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Query: 306 VHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
+ R + + + M R C+ D + + LI+ +C + +++ +KV + K+G+
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLK 425
N+ T++ + + + A ++ +M LP+ +TY IL+ ++ ++ L++
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Query: 426 KEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRK 485
+++ +++++ + Y +I C+ G +A+ L + K +KPN+ Y ++ L K
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL-PCKGVKPNVMTYTVMISGLCK 520
Query: 486 AGQLKMHEELVEKMVARG 503
G L L+ KM G
Sbjct: 521 KGSLSEANILLRKMEEDG 538
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 182/366 (49%), Gaps = 2/366 (0%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV 194
+ + F+L ++ G+ T +++I + R A ++ G PD
Sbjct: 100 RTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTT 159
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
+ ++ L + + EA D V++ +PDV+ Y S+++G CR+G A ++ + M
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRT 313
++ +K +V TYS +IDSLCR G I A +F EM G + VT+NSL+R KAG+
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279
Query: 314 EKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
+ M + I +N L++ ++ L+EA ++ M+ +G++PN T+N++
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339
Query: 374 FGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQV 433
+ ++ A+ M M C P+ +T+ L++ + K +D +K+ + + + +
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Query: 434 EPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHE 493
N TY IL+ FC+ G A +L +EMV L P++ Y +L+ L G+L+
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL-PDVMTYGILLDGLCDNGKLEKAL 458
Query: 494 ELVEKM 499
E+ E +
Sbjct: 459 EIFEDL 464
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 170/354 (48%), Gaps = 8/354 (2%)
Query: 95 GAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGV 154
G I I ++ + K SS Y ++ K ++ L+ M +R +
Sbjct: 242 GCIDAAISLFKEM-------ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 155 EITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQS 214
TF+VL+ +V+ G EA + M G++P+ + + ++ C + R EA +
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 215 FFD-SVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLC 273
D V+++ PD++ +TSLI G+C +++ ++F+++ G+ N TYSI++ C
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 274 RCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTI 333
+ G+I A ++F EM+ G P+ +T+ L+ G+ EK L++F +++ +
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM 393
Y +IE C+ +E+A + + KGV PN T+ + + K ++ A+ + KM
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 394 KELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMF 447
+E PN TYN L+R + KL +EM + ++ +++I M
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 135/290 (46%), Gaps = 36/290 (12%)
Query: 215 FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
F + ++ R P ++ ++ R + + K ++ GI N++T +I+I+ CR
Sbjct: 76 FQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCR 135
Query: 275 CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIG 334
C + A+ V +++ G P+ TFN+L++ G+
Sbjct: 136 CCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK---------------------- 173
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMK 394
+ EAV +++ MV+ G P+ T+NSI I + D + A + KM+
Sbjct: 174 -------------VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 220
Query: 395 ELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWN 454
E N + TY+ ++ ID + L KEM+ ++ +V TY L+ C+ G WN
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
Query: 455 NAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+ L+K+MV + + PN+ + +L++ K G+L+ EL ++M+ RG
Sbjct: 281 DGALLLKDMV-SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 90/211 (42%), Gaps = 36/211 (17%)
Query: 136 LRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVA 195
++ D + ++ RG+ A T+S+L++ + ++G A F M +GV PD +
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 196 VSIVVSSLCRKRRAEEAQSFFDSVKDR--------------------------------- 222
I++ LC + E+A F+ ++
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 223 ---FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQIT 279
+P+V+ YT +I G C+ G + A + + M++ G PN TY+ +I + R G +T
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKA 310
+ + EM G + +A + ++ + + A
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVIDMLLSA 591
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query: 362 GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMR-MFAESKSIDM 420
G+A N T N + C + A+ + K+ +L P+T T+N L++ +F E K +
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 421 VLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVL 480
V+ L M EN +P+V TY ++ C G + A L+++M EE+++K ++ Y ++
Sbjct: 178 VV-LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYSTII 235
Query: 481 ELLRKAGQLKMHEELVEKMVARGFVS 506
+ L + G + L ++M +G S
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKS 261
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 184/363 (50%), Gaps = 2/363 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+D M G TF+ LI A+EAV +RM G P+ V +VV+
Sbjct: 99 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 158
Query: 202 SLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC++ + A + + ++ + E DV+++ ++I C+ ++ A +FK+M+ GI+P
Sbjct: 159 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
NV TYS +I LC G+ + A + ++MI+ NPN VTFN+L+ VK G+ + ++
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ M + + D YN LI C + L++A ++ MV K P+ T+N++ K
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
V ++ +M + +T+TY L++ D K+ K+M + V P++ TY
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
IL+ C G A ++ M ++ +K ++ +Y ++E + KAG++ +L +
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 501 ARG 503
+G
Sbjct: 458 LKG 460
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 194/419 (46%), Gaps = 41/419 (9%)
Query: 121 SSPEPYI----EMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
S P P I ++L K++ FDL L + M+ G+ T+++LI + R +
Sbjct: 4 SRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISL 63
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIH 235
A+ +M G P V +S +++ C +R +A + D V+ + PD I +T+LIH
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 236 GWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNP 295
G K A + M G +PN+ TY +V++ LC+ G I A ++ +M A
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 296 NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVL 355
+ V FN+++ K + L +F +M+ + + Y+ LI C C +A ++L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 356 NLMVKKGVAPNSSTFNSIFGCIA---------KLHD-----------------VNG---- 385
+ M++K + PN TFN++ KLHD +NG
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 386 -----AHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
A +M+ M +C P+ TYN L++ F +SK ++ +L +EM + + TY
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
LI G +NA K+ K+MV + + P++ Y +L+ L G+L+ E+ + M
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 176/368 (47%), Gaps = 2/368 (0%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
DLA++L++ M+ +E F+ +I + +A++ F ME G+ P+ V S +
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 200 VSSLCRKRRAEEA-QSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI 258
+S LC R +A Q D ++ + P+++ + +LI + + GK AE++ DM I
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 259 KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
P++ TY+ +I+ C ++ +A +F M+ C P+ T+N+L++ K+ R E +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 319 VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
+F +M DT+ Y LI+ D + + A KV MV GV P+ T++ + +
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 379 KLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVN 438
+ A ++ M++ + Y ++ ++ +D L + V+PNV
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 439 TYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEK 498
TY +I C K AY L+K+M E+ L P+ Y ++ + G EL+ +
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIRE 525
Query: 499 MVARGFVS 506
M + FV
Sbjct: 526 MRSCRFVG 533
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 162/325 (49%), Gaps = 2/325 (0%)
Query: 183 RMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAG 241
+M+ G++ + +I+++ CR+ + A + + K +EP ++ +SL++G+C
Sbjct: 35 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 94
Query: 242 KIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFN 301
+I A + M + G +P+ T++ +I L + + A + M+ GC PN VT+
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154
Query: 302 SLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKK 361
++ K G + + N+M+ AD + +N +I+ C+ ++++A+ + M K
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 362 GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMV 421
G+ PN T++S+ C+ + A ++ + M E PN +T+N L+ F +
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 422 LKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
KL +M + ++P++ TY LI FC + A ++ + MV K P+L Y +++
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV-SKDCFPDLDTYNTLIK 333
Query: 482 LLRKAGQLKMHEELVEKMVARGFVS 506
K+ +++ EL +M RG V
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVG 358
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 142/284 (50%), Gaps = 1/284 (0%)
Query: 219 VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
VK R P + + L+ + K + + + M+ GI N++TY+I+I+ CR QI
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
+ A + +M+ G P+ VT +SL+ + R + + +QM DTI + L
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNC 398
I EAV +++ MV++G PN T+ + + K D++ A + KM+
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 399 LPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYK 458
+ + +N ++ + + +D L L KEM+ + PNV TY LI C G W++A +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 459 LMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
L+ +M+E+K + PNL + +++ K G+ E+L + M+ R
Sbjct: 242 LLSDMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 124/276 (44%), Gaps = 1/276 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L D M R ++ T++ LI + +A F M PD + ++
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
C+ +R E+ F + R D + YT+LI G G + A+++FK M G+ P
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
++ TYSI++D LC G++ +A +VF M + + + +++ KAG+ + +F
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ + + YN +I C L+EA +L M + G P+S T+N++ +
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRD 513
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESK 416
D + + +M+ + + T ++ M + +
Sbjct: 514 GDKAASAELIREMRSCRFVGDASTIGLVANMLHDGR 549
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 1/146 (0%)
Query: 358 MVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKS 417
MVK P+ FN + IAK+ + + KM+ L N TYNIL+ F
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 418 IDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYE 477
I + L L +M + EP++ T L+ +C ++A L+ +MV E +P+ +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV-EMGYRPDTITFT 119
Query: 478 NVLELLRKAGQLKMHEELVEKMVARG 503
++ L + LV++MV RG
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRG 145
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 188/363 (51%), Gaps = 2/363 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+D M G TF+ LI A+EAV +RM G P+ V +VV+
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 202 SLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC++ + A + + ++ + E +V++Y+++I C+ + A +F +M++ G++P
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
NV TYS +I LC + + A + ++MI+ NPN VTFN+L+ VK G+ + +++
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
++M + + D Y+ LI C + L+EA + LM+ K PN T+N++ K
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
++ ++ +M + + NT+TY L+ F +++ D + K+M + V PN+ TY
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
L+ C+ G A + E ++ ++P + Y ++E + KAG+++ +L +
Sbjct: 474 NTLLDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532
Query: 501 ARG 503
+G
Sbjct: 533 LKG 535
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 199/428 (46%), Gaps = 38/428 (8%)
Query: 99 HGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITA 158
H + ++ F + PS E + ++L K++ FDL L + M+ G+
Sbjct: 62 HSMKLDDAIGLFGGMVKSRPLPSIFE-FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNL 120
Query: 159 ETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS 218
T+++LI + R + A+ +M G P V +S +++ C +R +A + D
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 219 -VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQ 277
V+ + PD I +T+LIHG K A + M G +PN+ TY +V++ LC+ G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 278 ITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNF 337
I A ++ +M A N V +++++ K + L +F +M+ + I Y+
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 338 LIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA---------KLHD------ 382
LI C C E +A ++L+ M+++ + PN TFN++ KL+D
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 383 -----------VNG---------AHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVL 422
+NG A M+ M +C PN +TYN L+ F ++K ID +
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 423 KLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLEL 482
+L +EM + + N TY LI F + +NA + K+MV + + PN+ Y +L+
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDG 479
Query: 483 LRKAGQLK 490
L K G+L+
Sbjct: 480 LCKNGKLE 487
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 166/331 (50%), Gaps = 1/331 (0%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
DLA++L++ M+ +E +S +I + +A++ F ME+ GV P+ + S +
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 200 VSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI 258
+S LC R +A D ++ + P+V+ + +LI + + GK+ AE+++ +M I
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 259 KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
P++ TYS +I+ C ++ A +F MI C PN VT+N+L+ KA R ++ ++
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 319 VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
+F +M + +T+ Y LI + + + A V MV GV PN T+N++ +
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 379 KLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVN 438
K + A ++ ++ P TYNI++ ++ ++ L + V+P+V
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541
Query: 439 TYRILILMFCEKGHWNNAYKLMKEMVEEKSL 469
Y +I FC KG A L ++M E+ L
Sbjct: 542 IYNTMISGFCRKGLKEEADALFRKMREDGPL 572
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 145/296 (48%), Gaps = 2/296 (0%)
Query: 208 RAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYS 266
+ ++A F VK R P + + L+ + K + + + M+ GI N++TY+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 267 IVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF 326
I+I+ CR QI+ A + +M+ G P+ VT +SL+ + R + + +QM
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 327 NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGA 386
DTI + LI EAV +++ MV++G PN T+ + + K D++ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 387 HRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILM 446
+ KM+ N + Y+ ++ + + D L L EM+ V PNV TY LI
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 447 FCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
C W++A +L+ +M+E K + PN+ + +++ K G+L E+L ++M+ R
Sbjct: 305 LCNYERWSDASRLLSDMIERK-INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 143/299 (47%), Gaps = 5/299 (1%)
Query: 110 FNWATSLKNFPSSPE--PYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRR 167
N T ++N P Y ++ + A L+ M R + TF+ LI
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 168 YVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV--KDRFEP 225
+V+ G EA ++ M + PD S +++ C R +EA+ F+ + KD F P
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-P 398
Query: 226 DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVF 285
+V+ Y +LI+G+C+A +I+ E+F++M G+ N TY+ +I + A VF
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 286 AEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRD 345
+M+ G +PN +T+N+L+ K G+ EK + VF ++R YN +IE C+
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 346 ENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
+E+ + + KGV P+ +N++ + A ++ KM+E LP++ T
Sbjct: 519 GKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 148/315 (46%), Gaps = 1/315 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D K RH D A +L M+ +GV T+S LI ++A + M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIE 244
+ + P+ V + ++ + ++ + EA+ +D +K +PD+ Y+SLI+G+C +++
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A+ +F+ M PNV TY+ +I+ C+ +I ++F EM G N VT+ +L+
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
+A + VF QM + + YN L++ C++ LE+A+ V + + +
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
P T+N + + K V ++ + P+ + YN ++ F + L
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 425 KKEMDENQVEPNVNT 439
++M E+ P+ T
Sbjct: 563 FRKMREDGPLPDSGT 577
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 221/476 (46%), Gaps = 48/476 (10%)
Query: 70 ALEFSRL-SAAHPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIE 128
AL FSRL + + R I + G H + F ++L F + PS + + +
Sbjct: 21 ALSFSRLLDLSFWVRAFCNYREILRNGL--HSLQFNEALDLFTHMVESRPLPSIID-FTK 77
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGV---------------------------------- 154
+L++ K++ FD+ +L D ++ GV
Sbjct: 78 LLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLG 137
Query: 155 -EITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQ 213
E TF+ LI + EA+ N+M + G+ PD V + ++ SLC+ A
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 214 SFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSL 272
S FD +++ PDV++YTSL++G C +G+ A+ + + M IKP+V T++ +ID+
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 273 CRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADT 332
+ G+ A +++ EMI PN T+ SL+ G ++ Q+F M+ C D
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 333 IGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAK 392
+ Y LI C+ + +++A+K+ M +KG+ N+ T+ ++ ++ N A +++
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 393 MKELNCLPNTLTYNILMRMFAESKSIDMVLKL-----KKEMDENQVEPNVNTYRILILMF 447
M PN TYN+L+ + + L + K+EMD V PN+ TY +L+
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD--GVAPNIWTYNVLLHGL 435
Query: 448 CEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
C G A + ++M ++ + + Y +++ + KAG++K L + ++G
Sbjct: 436 CYNGKLEKALMVFEDM-RKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG 490
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 166/364 (45%), Gaps = 39/364 (10%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A +++ M G++ ++ +I + G A+ F++ME+YG+ PD V + +V+
Sbjct: 161 AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 202 SLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC R +A S + K + +PDVI + +LI + + GK AEE++ +M I P
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
N+ TY+ +I+ C G + A +F M GC P+ V + SL+ K + + +++F
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 321 NQMKRFNCAADTIGY-----------------------------------NFLIECHCRD 345
+M + +TI Y N L+ C C +
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 346 ENLEEAVKVLNLMVKK---GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
+++A+ + M K+ GVAPN T+N + + + A ++ M++
Sbjct: 401 GKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGI 460
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
+TY I+++ ++ + + L + V+PNV TY +I +G + A+ L ++
Sbjct: 461 ITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRK 520
Query: 463 MVEE 466
M E+
Sbjct: 521 MKED 524
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 102/203 (50%), Gaps = 4/203 (1%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y +++ K + D A + M +G+ T++ LI+ + + G A F+ M
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK----DRFEPDVILYTSLIHGWCRAG 241
GV P+ ++++ LC + ++A F+ ++ D P++ Y L+HG C G
Sbjct: 380 SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNG 439
Query: 242 KIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFN 301
K+E+A +F+DM+ + + TY+I+I +C+ G++ A ++F + G PN VT+
Sbjct: 440 KLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYT 499
Query: 302 SLMRVHVKAGRTEKVLQVFNQMK 324
+++ + G + +F +MK
Sbjct: 500 TMISGLFREGLKHEAHVLFRKMK 522
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 4/185 (2%)
Query: 112 WATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRA 171
+ S K + Y ++ G++ ++A + M +RGV T++VL+
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 172 GLAAEAVHAFNRMEDY---GVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDV 227
G +A+ F M+ GVAP+ ++++ LC + E+A F+ ++ R + +
Sbjct: 401 GKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGI 460
Query: 228 ILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAE 287
I YT +I G C+AGK++ A +F + G+KPNV TY+ +I L R G AH +F +
Sbjct: 461 ITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRK 520
Query: 288 MIDAG 292
M + G
Sbjct: 521 MKEDG 525
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 192/372 (51%), Gaps = 2/372 (0%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
M++ + R LA+ + + G E TFS LI G +EA+ +RM + G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAE 247
P + ++ +V+ LC + +A D V+ F+P+ + Y ++ C++G+ A
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
E+ + M++ IK + YSI+ID LC+ G + A ++F EM G + + + +L+R
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
AGR + ++ M + D + ++ LI+C ++ L EA ++ M+++G++P++
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKE 427
T+ S+ K + ++ A+ M M C PN T+NIL+ + ++ ID L+L ++
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 428 MDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
M V + TY LI FCE G A +L +EMV + ++P++ Y+ +L+ L G
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR-VRPDIVSYKILLDGLCDNG 471
Query: 488 QLKMHEELVEKM 499
+ + E+ EK+
Sbjct: 472 EPEKALEIFEKI 483
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 185/388 (47%), Gaps = 2/388 (0%)
Query: 118 NFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEA 177
F + Y +L + K LA L+ M+ R +++ A +S++I + G A
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 178 VHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHG 236
+ FN ME G D + + ++ C R ++ D +K + PDV+ +++LI
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 237 WCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPN 296
+ + GK+ AEE+ K+M GI P+ TY+ +ID C+ Q+ +A+ + M+ GC PN
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 297 AVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLN 356
TFN L+ + KA + L++F +M ADT+ YN LI+ C LE A ++
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 357 LMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESK 416
MV + V P+ ++ + + + A ++ K+++ + YNI++ +
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 417 SIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVY 476
+D L + V+P+V TY I+I C+KG + A L ++M EE PN Y
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM-EEDGHSPNGCTY 565
Query: 477 ENVLELLRKAGQLKMHEELVEKMVARGF 504
++ G +L+E++ GF
Sbjct: 566 NILIRAHLGEGDATKSAKLIEEIKRCGF 593
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 173/401 (43%), Gaps = 9/401 (2%)
Query: 54 NPDAAPPSPTLTI------PDLALEFSRLSAAHPISPSTARRVIEKCGAIRHGIPFYQSL 107
P+ P L + LA+E R I + I G + G +
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG-SLDNAF 267
Query: 108 AFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRR 167
FN +K F + Y ++ +D L+ M R + FS LI
Sbjct: 268 NLFN-EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 168 YVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFD-SVKDRFEPD 226
+V+ G EA M G++PD V + ++ C++ + ++A D V P+
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 227 VILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFA 286
+ + LI+G+C+A I+ E+F+ M G+ + TY+ +I C G++ A ++F
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 287 EMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDE 346
EM+ P+ V++ L+ G EK L++F ++++ D YN +I C
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 347 NLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYN 406
+++A + + KGV P+ T+N + G + K ++ A ++ KM+E PN TYN
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 407 ILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMF 447
IL+R KL +E+ + +T ++++ M
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 146/290 (50%), Gaps = 1/290 (0%)
Query: 215 FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
F + + R P +I ++ L R + + ++ K M+ GI N++T SI+I+ CR
Sbjct: 60 FQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCR 119
Query: 275 CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIG 334
C +++ A ++I G P+ VTF++L+ GR + L++ ++M I
Sbjct: 120 CRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLIT 179
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMK 394
N L+ C + + +AV +++ MV+ G PN T+ + + K A + KM+
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 395 ELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWN 454
E + + Y+I++ + S+D L EM+ + ++ Y LI FC G W+
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 455 NAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+ KL+++M++ K + P++ + +++ K G+L+ EEL ++M+ RG
Sbjct: 300 DGAKLLRDMIKRK-ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 4/219 (1%)
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
VF+ + D V++ +R + + + + +F +M R I ++ L
Sbjct: 27 VFSSVSDG---KGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVA 83
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
R + + + + M KG+A N T + + C + ++ A K+ +L P+T+
Sbjct: 84 RTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTV 143
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
T++ L+ + L+L M E +P + T L+ C G ++A L+ M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 464 VEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
V E +PN Y VL+++ K+GQ + EL+ KM R
Sbjct: 204 V-ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 186/365 (50%), Gaps = 2/365 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A + + MK G T++ L+ Y ++ EA+ N M G +P V + ++S
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
+ R +EA + + ++ +PDV YT+L+ G+ RAGK+E A IF++M++AG KP
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
N+ T++ I G+ T +F E+ G +P+ VT+N+L+ V + G +V VF
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+MKR + +N LI + R + E+A+ V M+ GV P+ ST+N++ +A+
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
+ ++ A+M++ C PN LTY L+ +A K I ++ L +E+ +EP
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLL 597
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
+ L+L+ + A + E+ +E+ P++ +++ + + + +++ M
Sbjct: 598 KTLVLVCSKCDLLPEAERAFSEL-KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK 656
Query: 501 ARGFV 505
RGF
Sbjct: 657 ERGFT 661
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 173/368 (47%), Gaps = 38/368 (10%)
Query: 173 LAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYT 231
LA A F + +DY D V+I++S L ++ R A + F+ ++ D F DV YT
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYT 212
Query: 232 SLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVID--------------------- 270
SLI + +G+ A +FK M++ G KP + TY+++++
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272
Query: 271 --------------SLCRCGQI-TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEK 315
+ C+ G + A VF EM AG + + VT+N+L+ V+ K+ R ++
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 316 VLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFG 375
++V N+M + + YN LI + RD L+EA+++ N M +KG P+ T+ ++
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 376 CIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEP 435
+ V A ++ +M+ C PN T+N ++M+ ++K+ E++ + P
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 436 NVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEEL 495
++ T+ L+ +F + G + + KEM + P + + ++ + G + +
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 496 VEKMVARG 503
+M+ G
Sbjct: 512 YRRMLDAG 519
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 206/452 (45%), Gaps = 50/452 (11%)
Query: 96 AIRHGIPFYQ----SLAFFNWATSLKNFPSSPEPYIE--MLDLAGKLRHFDLAWHLIDSM 149
A G+ F++ +L F+W K++ S + + ++ + GK A ++ + +
Sbjct: 140 AFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGL 199
Query: 150 KTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV---------- 199
+ G + +++ LI + +G EAV+ F +ME+ G P + +++
Sbjct: 200 QEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTP 259
Query: 200 ---VSSLCRKRRA-----------------------EEAQSFFDSVKDR-FEPDVILYTS 232
++SL K ++ +EA F+ +K F D + Y +
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 233 LIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAG 292
L+ + ++ + + A ++ +M G P++ TY+ +I + R G + A ++ +M + G
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 293 CNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAV 352
P+ T+ +L+ +AG+ E + +F +M+ C + +N I+ + E +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 353 KVLNLMVKKGVAPNSSTFNS---IFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILM 409
K+ + + G++P+ T+N+ +FG +V+G ++ +MK +P T+N L+
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG---VFKEMKRAGFVPERETFNTLI 496
Query: 410 RMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSL 469
++ S + + + + M + V P+++TY ++ G W + K++ EM E+
Sbjct: 497 SAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM-EDGRC 555
Query: 470 KPNLQVYENVLELLRKAGQLKMHEELVEKMVA 501
KPN Y ++L ++ + L E++ +
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYS 587
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 146/302 (48%), Gaps = 1/302 (0%)
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR 208
MK G ETF+ LI Y R G +A+ + RM D GV PD + V+++L R
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 209 AEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSI 267
E+++ ++D R +P+ + Y SL+H + +I + +++ I+P
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 268 VIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFN 327
++ +C + A F+E+ + G +P+ T NS++ ++ + K V + MK
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 328 CAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAH 387
YN L+ H R + ++ ++L ++ KG+ P+ ++N++ + + A
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 388 RMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMF 447
R++++M+ +P+ +TYN + +A + + + + M ++ PN NTY ++ +
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779
Query: 448 CE 449
C+
Sbjct: 780 CK 781
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 114/227 (50%), Gaps = 1/227 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y +L + L L + + + +E A L+ + L EA AF+ ++
Sbjct: 562 YCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELK 621
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIE 244
+ G +PD ++ +VS R++ +A D +K+R F P + Y SL++ R+
Sbjct: 622 ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
++EEI +++ GIKP++ +Y+ VI + CR ++ A +F+EM ++G P+ +T+N+ +
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEA 351
+ E+ + V M + C + YN +++ +C+ +EA
Sbjct: 742 GSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 125/287 (43%), Gaps = 1/287 (0%)
Query: 124 EPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNR 183
E + ++ + F+ A + M GV T++ ++ R G+ ++
Sbjct: 490 ETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549
Query: 184 MEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGK 242
MED P+++ ++ + + S + V EP +L +L+ +
Sbjct: 550 MEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDL 609
Query: 243 IERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNS 302
+ AE F ++K+ G P++ T + ++ R + +A+ V M + G P+ T+NS
Sbjct: 610 LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNS 669
Query: 303 LMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKG 362
LM +H ++ K ++ ++ D I YN +I +CR+ + +A ++ + M G
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729
Query: 363 VAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILM 409
+ P+ T+N+ G A A + M + C PN TYN ++
Sbjct: 730 IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 183/395 (46%), Gaps = 34/395 (8%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L++ M G AETF+ +I + EA NRM G APD + +++
Sbjct: 271 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 330
Query: 202 SLCRKRRAEEAQSFF------------------------DSVKDRFE---------PDVI 228
LC+ R + A+ F D K PDV
Sbjct: 331 GLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390
Query: 229 LYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM 288
Y SLI+G+ + G + A E+ DM++ G KPNV++Y+I++D C+ G+I A++V EM
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 289 IDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL 348
G PN V FN L+ K R + +++F +M R C D +N LI C + +
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 349 EEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNIL 408
+ A+ +L M+ +GV N+ T+N++ + ++ A ++ +M + +TYN L
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 409 MRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
++ + +D L ++M + P+ + ILI C G A + KEMV S
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 469 LKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
P++ + +++ L +AG+++ + K+ A G
Sbjct: 631 -TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 153/305 (50%), Gaps = 1/305 (0%)
Query: 141 LAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVV 200
LA ++ M+ +G + ++++L+ + + G EA + N M G+ P+ V + ++
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 201 SSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIK 259
S+ C++ R EA F + + +PDV + SLI G C +I+ A + +DM G+
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 260 PNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV 319
N TY+ +I++ R G+I A + EM+ G + +T+NSL++ +AG +K +
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 320 FNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAK 379
F +M R A I N LI CR +EEAV+ MV +G P+ TFNS+ + +
Sbjct: 587 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646
Query: 380 LHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNT 439
+ M+ K++ P+T+T+N LM + + L E E+ PN T
Sbjct: 647 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT 706
Query: 440 YRILI 444
+ IL+
Sbjct: 707 WSILL 711
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 168/338 (49%), Gaps = 2/338 (0%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
L D + + G+ T++ LI Y + GL A+ + M + G P+ + +I+V C
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 205 RKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
+ + +EA + + + D +P+ + + LI +C+ +I A EIF++M G KP+V+
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
T++ +I LC +I A + +MI G N VT+N+L+ ++ G ++ ++ N+M
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDV 383
D I YN LI+ CR +++A + M++ G AP++ + N + + + V
Sbjct: 556 VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL 443
A +M P+ +T+N L+ + I+ L + +++ + P+ T+ L
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Query: 444 ILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
+ C+ G +A L+ E +E+ PN + + +L+
Sbjct: 676 MSWLCKGGFVYDACLLLDEGIED-GFVPNHRTWSILLQ 712
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 194/466 (41%), Gaps = 51/466 (10%)
Query: 80 HPISPSTARRVIEKCGAIRHGIPF--YQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLR 137
H I+P +++E +P S+ F+W S + S + Y ++ G
Sbjct: 74 HKITPFQLYKLLE--------LPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANG 125
Query: 138 HFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMED-YGVAPD---- 192
F L+ MK G+ F ++R Y +AG + M + Y P
Sbjct: 126 EFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSY 185
Query: 193 KVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKD 252
V + I+VS C K A F+D + + P + + ++ +C +I+ A + +D
Sbjct: 186 NVVLEILVSGNCHK---VAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRD 242
Query: 253 MKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGR 312
M G PN Y +I SL +C ++ A + EM GC P+A TFN ++ K R
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 313 TEKVLQVFNQMKRFNCAADTIGYNFLIECHCR---------------------------- 344
+ ++ N+M A D I Y +L+ C+
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHG 362
Query: 345 ---DENLEEAVKVLNLMVKK-GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLP 400
L++A VL+ MV G+ P+ T+NS+ K V A + M+ C P
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP 422
Query: 401 NTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLM 460
N +Y IL+ F + ID + EM + ++PN + LI FC++ A ++
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 461 KEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVS 506
+EM K KP++ + +++ L + ++K L+ M++ G V+
Sbjct: 483 REM-PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 141/323 (43%), Gaps = 49/323 (15%)
Query: 104 YQSLAFFNWATSL-----------KNFPSSPE--PYIEMLDLAGKLRHFDLAWHLIDSMK 150
Y SL + W L +N P Y ++D KL D A+++++ M
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 151 TRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC------ 204
G++ F+ LI + + EAV F M G PD + ++S LC
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 205 -----------------------------RKRRAEEAQSFFDSVKDRFEP-DVILYTSLI 234
R+ +EA+ + + + P D I Y SLI
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 235 HGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCN 294
G CRAG++++A +F+ M G P+ + +I+I+ LCR G + A + EM+ G
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 295 PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKV 354
P+ VTFNSL+ +AGR E L +F +++ DT+ +N L+ C+ + +A +
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691
Query: 355 LNLMVKKGVAPNSSTFNSIFGCI 377
L+ ++ G PN T++ + I
Sbjct: 692 LDEGIEDGFVPNHRTWSILLQSI 714
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 179/350 (51%), Gaps = 7/350 (2%)
Query: 122 SPEPYIEMLDLAGKLRHFDLA--WHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVH 179
SP P I + + G + DL L+D+M +G T++ LI G +AV
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 313
Query: 180 AFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWC 238
RM P+ V +++ L ++RRA +A S+++R + + +Y+ LI G
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLF 373
Query: 239 RAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAV 298
+ GK E A +++ M + G KPN+ YS+++D LCR G+ A ++ MI +GC PNA
Sbjct: 374 KEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAY 433
Query: 299 TFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLM 358
T++SLM+ K G E+ +QV+ +M + C+ + Y+ LI+ C ++EA+ V + M
Sbjct: 434 TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM 493
Query: 359 VKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM---KELNCLPNTLTYNILMRMFAES 415
+ G+ P++ ++SI + + ++ A ++Y +M +E P+ +TYNIL+
Sbjct: 494 LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQ 553
Query: 416 KSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGH-WNNAYKLMKEMV 464
K I + L M + +P+V T + EK + + ++E+V
Sbjct: 554 KDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELV 603
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 170/367 (46%), Gaps = 2/367 (0%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
R + ++++S + +F+++I+ + A+ F M + PD
Sbjct: 166 RGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTY 225
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD 255
++ LC++ R +EA D ++ + P ++Y LI G C+ G + R ++ +M
Sbjct: 226 CTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFL 285
Query: 256 AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEK 315
G PN TY+ +I LC G++ +A + M+ + C PN VT+ +L+ VK R
Sbjct: 286 KGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATD 345
Query: 316 VLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFG 375
+++ + M+ + Y+ LI ++ EEA+ + M +KG PN ++ +
Sbjct: 346 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVD 405
Query: 376 CIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEP 435
+ + N A + +M CLPN TY+ LM+ F ++ + +++ KEMD+
Sbjct: 406 GLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSR 465
Query: 436 NVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEEL 495
N Y +LI C G A + +M+ +KP+ Y ++++ L G + +L
Sbjct: 466 NKFCYSVLIDGLCGVGRVKEAMMVWSKML-TIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 496 VEKMVAR 502
+M+ +
Sbjct: 525 YHEMLCQ 531
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 179/382 (46%), Gaps = 6/382 (1%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D K D A L+D M++ G + ++VLI + G + M
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIE 244
G P++V + ++ LC K + ++A S + V + P+ + Y +LI+G + +
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A + M++ G N H YS++I L + G+ A ++ +M + GC PN V ++ L+
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
+ G+ + ++ N+M C + Y+ L++ + EEAV+V M K G +
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
N ++ + + + V A +++KM + P+T+ Y+ +++ S+D LKL
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 425 KKEM---DENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
EM +E + +P+V TY IL+ C + + A L+ M+ ++ P++ L
Sbjct: 525 YHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSML-DRGCDPDVITCNTFLN 583
Query: 482 LL-RKAGQLKMHEELVEKMVAR 502
L K+ +E++V R
Sbjct: 584 TLSEKSNSCDKGRSFLEELVVR 605
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 181/396 (45%), Gaps = 12/396 (3%)
Query: 109 FFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRY 168
F A + +F M++ FD L+ ++ I +F V+ R Y
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAY 122
Query: 169 VRAGLAAEAVHAFNRMEDYGVAPDKV-AVSIVVSSLCRKRRAEEAQSFFDSVKD-----R 222
+A L +AV F+RM D V + + V++ + + F+D V +
Sbjct: 123 GKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN 182
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
P+ + + +I C+ ++RA E+F+ M + P+ +TY ++D LC+ +I A
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
+ EM GC+P+ V +N L+ K G +V ++ + M C + + YN LI
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 343 CRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
C L++AV +L MV PN T+ ++ + K A R+ + M+E N
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 403 LTYNILMR-MFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMK 461
Y++L+ +F E K+ + + L ++M E +PN+ Y +L+ C +G N A +++
Sbjct: 363 HIYSVLISGLFKEGKA-EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 462 EMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVE 497
M+ L PN Y ++++ K G + EE V+
Sbjct: 422 RMIASGCL-PNAYTYSSLMKGFFKTG---LCEEAVQ 453
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 198/397 (49%), Gaps = 6/397 (1%)
Query: 97 IRHGIPFYQ---SLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRG 153
+R+GI F + SL F + PS + + +L K++ +D+ +L + M+ G
Sbjct: 53 LRNGIRFMKLDDSLDLFFHMVQCRPLPSIAD-FSRLLSAISKMKKYDVVIYLWEQMQMLG 111
Query: 154 VEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQ 213
+ T ++L+ + R + A+ +M G P V +++ CR R +A
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 214 SFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSL 272
FD V ++P+V++Y ++I G C++ +++ A ++ M+ GI P+V TY+ +I L
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 273 CRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADT 332
C G+ + A + + M P+ TFN+L+ VK GR + + + +M R + D
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291
Query: 333 IGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAK 392
+ Y+ LI C L+EA ++ MV KG P+ T++ + K V +++ +
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE 351
Query: 393 MKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGH 452
M + + NT+TY IL++ + + +++ ++ + M V PN+ TY +L+ C+ G
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Query: 453 WNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQL 489
A ++ +M ++ + ++ Y ++ + KAG++
Sbjct: 412 IEKALVILADM-QKNGMDADIVTYNIIIRGMCKAGEV 447
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 185/378 (48%), Gaps = 2/378 (0%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
+L+ + LA + M G E + TF L+ + R +A++ F++M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAE 247
P+ V + ++ LC+ ++ + A + + KD PDV+ Y SLI G C +G+ A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
+ M I P+V T++ +ID+ + G+++ A + + EMI +P+ VT++ L+
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
R ++ ++F M C D + Y+ LI +C+ + +E +K+ M ++GV N+
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKE 427
T+ + + +N A ++ +M PN +TYN+L+ ++ I+ L + +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 428 MDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
M +N ++ ++ TY I+I C+ G +A+ + + + L P++ Y ++ L K G
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL-NCQGLMPDIWTYTTMMLGLYKKG 480
Query: 488 QLKMHEELVEKMVARGFV 505
+ + L KM G +
Sbjct: 481 LRREADALFRKMKEDGIL 498
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 132/261 (50%), Gaps = 1/261 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A ++ M R + TF+ LI V+ G +EA + M + PD V S+++
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 202 SLCRKRRAEEAQSFFD-SVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC R +EA+ F V PDV+ Y+ LI+G+C++ K+E ++F +M G+
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
N TY+I+I CR G++ A ++F M+ G +PN +T+N L+ G+ EK L +
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
M++ AD + YN +I C+ + +A + + +G+ P+ T+ ++ + K
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Query: 381 HDVNGAHRMYAKMKELNCLPN 401
A ++ KMKE LPN
Sbjct: 480 GLRREADALFRKMKEDGILPN 500
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 215 FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
FF V+ R P + ++ L+ + K + +++ M+ GI N+ T +I+++ CR
Sbjct: 69 FFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCR 128
Query: 275 CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIG 334
C Q++ A +MI G P+ VTF SL+ G
Sbjct: 129 CSQLSLALSFLGKMIKLGHEPSIVTFGSLLN----------------------------G 160
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMK 394
+ CR + + +A+ + + MV G PN +N+I + K V+ A + +M+
Sbjct: 161 F-------CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213
Query: 395 ELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWN 454
+ P+ +TYN L+ S ++ M + ++ P+V T+ LI ++G +
Sbjct: 214 KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVS 273
Query: 455 NAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
A + +EM+ +SL P++ Y ++ L +L EE+ MV++G
Sbjct: 274 EAEEFYEEMI-RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 85/207 (41%), Gaps = 1/207 (0%)
Query: 296 NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVL 355
N + ++R ++ + + L +F M + ++ L+ + + + + +
Sbjct: 45 NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104
Query: 356 NLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAES 415
M G+ N T N + C + ++ A KM +L P+ +T+ L+ F
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 416 KSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQV 475
+ L + +M +PNV Y +I C+ +NA L+ M E+ + P++
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM-EKDGIGPDVVT 223
Query: 476 YENVLELLRKAGQLKMHEELVEKMVAR 502
Y +++ L +G+ +V M R
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKR 250
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 187/377 (49%), Gaps = 14/377 (3%)
Query: 135 KLRHFDLAWHLIDSMKTR----GVEITAET--FSVLIRRYVRAGLAAEAVHAFNRME-DY 187
K R D A + + M+ + G I A++ F+ LI + G EA RM+ +
Sbjct: 341 KSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE 400
Query: 188 GVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERA 246
AP+ V + ++ CR + E A+ +K D +P+V+ +++ G CR + A
Sbjct: 401 RCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMA 460
Query: 247 EEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRV 306
F DM+ G+K NV TY +I + C + +A + +M++AGC+P+A + +L+
Sbjct: 461 VVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 307 HVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPN 366
+ R ++V ++K + D + YN LI C N E+ ++L M K+G P+
Sbjct: 521 LCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPD 580
Query: 367 SSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKK 426
S T+N++ K D RM +M+E P TY ++ + +D LKL K
Sbjct: 581 SITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFK 640
Query: 427 EMD-ENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRK 485
+M ++V PN Y ILI F + G++ A L +EM + K ++PN++ Y + + L +
Sbjct: 641 DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM-KMKMVRPNVETYNALFKCLNE 699
Query: 486 AGQ----LKMHEELVEK 498
Q LK+ +E+VE+
Sbjct: 700 KTQGETLLKLMDEMVEQ 716
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 171/339 (50%), Gaps = 13/339 (3%)
Query: 158 AETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF- 216
A T++ LI Y RAG A +RM++ + P+ V V+ +V +CR A FF
Sbjct: 406 AVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFM 465
Query: 217 DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCG 276
D K+ + +V+ Y +LIH C +E+A ++ M +AG P+ Y +I LC
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC--- 522
Query: 277 QITRAHD---VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTI 333
Q+ R HD V ++ + G + + + +N L+ + TEKV ++ M++ D+I
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSI 582
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM 393
YN LI + ++ E +++ M + G+ P +T+ ++ + +++ A +++ M
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 394 ---KELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEK 450
++N PNT+ YNIL+ F++ + L LK+EM V PNV TY L EK
Sbjct: 643 GLHSKVN--PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK 700
Query: 451 GHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQL 489
KLM EMVE+ S +PN E ++E L + +L
Sbjct: 701 TQGETLLKLMDEMVEQ-SCEPNQITMEILMERLSGSDEL 738
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 171/378 (45%), Gaps = 49/378 (12%)
Query: 173 LAAEAVHAF-NRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF--------------- 216
L E + A +R +GV+P+ V ++ +SSLC+ RA A
Sbjct: 238 LTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPF 297
Query: 217 -----------------------DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
D VK R PDV+ LI+ C++ +++ A E+F+ M
Sbjct: 298 NALLSCLGRNMDISRMNDLVLKMDEVKIR--PDVVTLGILINTLCKSRRVDEALEVFEKM 355
Query: 254 K----DAG--IKPNVHTYSIVIDSLCRCGQITRAHDVFAEM-IDAGCNPNAVTFNSLMRV 306
+ D G IK + ++ +ID LC+ G++ A ++ M ++ C PNAVT+N L+
Sbjct: 356 RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDG 415
Query: 307 HVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPN 366
+ +AG+ E +V ++MK + + N ++ CR L AV M K+GV N
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 367 SSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKK 426
T+ ++ + +V A Y KM E C P+ Y L+ + + +++ +
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 427 EMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKA 486
++ E ++ Y +LI +FC+K + Y+++ +M E++ KP+ Y ++ K
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDM-EKEGKKPDSITYNTLISFFGKH 594
Query: 487 GQLKMHEELVEKMVARGF 504
+ E ++E+M G
Sbjct: 595 KDFESVERMMEQMREDGL 612
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 146/297 (49%), Gaps = 15/297 (5%)
Query: 215 FFDSVKDRFEPDVILYTSLIHGW-CRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLC 273
++ K++ P ++ T+L+ W R G + ++ +++ + D+ +K N ++V+D L
Sbjct: 139 LYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERL-DSNMK-NSQVRNVVVDVLL 196
Query: 274 RCGQITRAHDVFAEMI--DAGCNPNAVTFNSLMRVHVKAGR---TEKVLQVFNQMKRFNC 328
R G + A V EM+ ++ PN +T + ++ V GR EK++ + ++
Sbjct: 197 RNGLVDDAFKVLDEMLQKESVFPPNRITADIVLH-EVWKGRLLTEEKIIALISRFSSHGV 255
Query: 329 AADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHR 388
+ +++ I C++ A +L+ ++K + FN++ C+ + D++ +
Sbjct: 256 SPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMND 315
Query: 389 MYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEM------DENQVEPNVNTYRI 442
+ KM E+ P+ +T IL+ +S+ +D L++ ++M D N ++ + +
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNT 375
Query: 443 LILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
LI C+ G A +L+ M E+ PN Y +++ +AG+L+ +E+V +M
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 169/326 (51%), Gaps = 1/326 (0%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
D A L+D M +RG++ T++ +IR + G+ A +E G PD ++ +I+
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 200 VSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI 258
+ +L + + EE + + ++ +P+V+ Y+ LI CR GKIE A + K MK+ G+
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 259 KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
P+ ++Y +I + CR G++ A + MI GC P+ V +N+++ K G+ ++ L+
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Query: 319 VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
+F ++ C+ ++ YN + + A+ ++ M+ G+ P+ T+NS+ C+
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Query: 379 KLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVN 438
+ V+ A + M+ P+ +TYNI++ F ++ I+ + + + M N PN
Sbjct: 485 REGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNET 544
Query: 439 TYRILILMFCEKGHWNNAYKLMKEMV 464
TY +LI G+ A +L ++V
Sbjct: 545 TYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 179/370 (48%), Gaps = 2/370 (0%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV 194
K+ D A ++D M+++ T++++I G A+ N++ P +
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 229
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
+I++ + + +EA D + R +PD+ Y ++I G C+ G ++RA E+ +++
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 289
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRT 313
+ G +P+V +Y+I++ +L G+ + +M C+PN VT++ L+ + G+
Sbjct: 290 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI 349
Query: 314 EKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
E+ + + MK D Y+ LI CR+ L+ A++ L M+ G P+ +N++
Sbjct: 350 EEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTV 409
Query: 374 FGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQV 433
+ K + A ++ K+ E+ C PN+ +YN + S L + EM N +
Sbjct: 410 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469
Query: 434 EPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHE 493
+P+ TY +I C +G + A++L+ +M P++ Y VL KA +++
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDM-RSCEFHPSVVTYNIVLLGFCKAHRIEDAI 528
Query: 494 ELVEKMVARG 503
++E MV G
Sbjct: 529 NVLESMVGNG 538
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 183/388 (47%), Gaps = 8/388 (2%)
Query: 117 KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
K+F Y M+ DLA +++ + + + T T+++LI + G E
Sbjct: 187 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDE 246
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD----RFEPDVILYTS 232
A+ + M G+ PD + ++ +C++ + A F+ V++ EPDVI Y
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA---FEMVRNLELKGCEPDVISYNI 303
Query: 233 LIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAG 292
L+ GK E E++ M PNV TYSI+I +LCR G+I A ++ M + G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 293 CNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAV 352
P+A +++ L+ + GR + ++ M C D + YN ++ C++ ++A+
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 353 KVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMF 412
++ + + G +PNSS++N++F + D A M +M P+ +TYN ++
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Query: 413 AESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPN 472
+D +L +M + P+V TY I++L FC+ +A +++ MV +PN
Sbjct: 484 CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV-GNGCRPN 542
Query: 473 LQVYENVLELLRKAGQLKMHEELVEKMV 500
Y ++E + AG EL +V
Sbjct: 543 ETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 159/340 (46%), Gaps = 1/340 (0%)
Query: 164 LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRF 223
+ R R+G E++H M G PD + + ++ R +A + ++
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHD 283
+PDV Y +LI+G+C+ +I+ A + M+ P+ TY+I+I SLC G++ A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
V +++ C P +T+ L+ + G ++ L++ ++M D YN +I C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
++ ++ A +++ + KG P+ ++N + + ++ KM C PN +
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
TY+IL+ I+ + L K M E + P+ +Y LI FC +G + A + ++ M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 464 VEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+ + L P++ Y VL L K G+ E+ K+ G
Sbjct: 395 ISDGCL-PDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 39/232 (16%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A +L+ MK +G+ A ++ LI + R G A+ M G PD V + V++
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411
Query: 202 SLCRKRRAEEAQSFF------------------------------------DSVKDRFEP 225
+LC+ +A++A F + + + +P
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Query: 226 DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVF 285
D I Y S+I CR G ++ A E+ DM+ P+V TY+IV+ C+ +I A +V
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL 531
Query: 286 AEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNF 337
M+ GC PN T+ L+ AG + +++ N + R + ++ Y+F
Sbjct: 532 ESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISE---YSF 580
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 195/429 (45%), Gaps = 49/429 (11%)
Query: 120 PSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVH 179
P P+ +L G+ L+ M + T +LI ++ EA+
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 180 AFNRME----DYG--VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK--DRFEPDVILYT 231
F +M D G + D + + ++ LC+ R +EA+ +K +R P+ + Y
Sbjct: 351 VFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYN 410
Query: 232 SLIHGWCRAGKIERAEEI-----------------------------------FKDMKDA 256
LI G+CRAGK+E A+E+ F DM+
Sbjct: 411 CLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE 470
Query: 257 GIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKV 316
G+K NV TY +I + C + +A + +M++AGC+P+A + +L+ + R
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 317 LQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGC 376
++V ++K + D + YN LI C N E+ ++L M K+G P+S T+N++
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 377 IAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMD-ENQVEP 435
K D RM +M+E P TY ++ + +D LKL K+M ++V P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 436 NVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQ----LKM 491
N Y ILI F + G++ A L +EM + K ++PN++ Y + + L + Q LK+
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEM-KMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 492 HEELVEKMV 500
+E+VE +V
Sbjct: 710 MDEMVEHLV 718
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 171/378 (45%), Gaps = 49/378 (12%)
Query: 173 LAAEAVHAF-NRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF--------------- 216
L E + A +R +GV+P+ V ++ +SSLC+ RA A
Sbjct: 238 LTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPF 297
Query: 217 -----------------------DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
D VK R PDV+ LI+ C++ +++ A E+F+ M
Sbjct: 298 NALLSCLGRNMDISRMNDLVLKMDEVKIR--PDVVTLGILINTLCKSRRVDEALEVFEQM 355
Query: 254 K----DAG--IKPNVHTYSIVIDSLCRCGQITRAHDVFAEM-IDAGCNPNAVTFNSLMRV 306
+ D G IK + ++ +ID LC+ G++ A ++ M ++ C PNAVT+N L+
Sbjct: 356 RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDG 415
Query: 307 HVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPN 366
+ +AG+ E +V ++MK + + N ++ CR L AV M K+GV N
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 367 SSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKK 426
T+ ++ + +V A Y KM E C P+ Y L+ + + +++ +
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 427 EMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKA 486
++ E ++ Y +LI +FC+K + Y+++ +M E++ KP+ Y ++ K
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM-EKEGKKPDSITYNTLISFFGKH 594
Query: 487 GQLKMHEELVEKMVARGF 504
+ E ++E+M G
Sbjct: 595 KDFESVERMMEQMREDGL 612
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 143/296 (48%), Gaps = 13/296 (4%)
Query: 215 FFDSVKDRFEPDVILYTSLIHGW-CRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLC 273
++ K++ P I+ T L+ W R G + ++ +++ + D+ +K N ++V+D L
Sbjct: 139 LYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERL-DSNMK-NSQVRNVVVDVLL 196
Query: 274 RCGQITRAHDVFAEMI--DAGCNPNAVTFNSLMRVHVKAG--RTEKVLQVFNQMKRFNCA 329
R G + A V EM+ ++ PN +T + ++ K EK++ + ++ +
Sbjct: 197 RNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVS 256
Query: 330 ADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRM 389
+++ I C++ A +L+ ++K + FN++ C+ + D++ + +
Sbjct: 257 PNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 390 YAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEM------DENQVEPNVNTYRIL 443
KM E+ P+ +T IL+ +S+ +D L++ ++M D N ++ + + L
Sbjct: 317 VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTL 376
Query: 444 ILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
I C+ G A +L+ M E+ PN Y +++ +AG+L+ +E+V +M
Sbjct: 377 IDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 188/404 (46%), Gaps = 13/404 (3%)
Query: 106 SLAFFNWATSLKNFPSSPEPYIEMLDLAG----KLRHFDLAWHLIDSMKTRGVEIT-AET 160
+ FF WA +++ P Y EM+D+ K + F + ++D MK + +
Sbjct: 142 AFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDV 201
Query: 161 FSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK 220
++R+Y L A + P+ A ++++ +LC+ +E ++ ++
Sbjct: 202 LLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMR 261
Query: 221 DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITR 280
R +PD + L GWCR ++A ++ ++M +AG KP TY ID+ C+ G +
Sbjct: 262 HRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDE 321
Query: 281 AHDVFAEMIDAGCN---PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNF 337
A D+F MI G P A TF ++ K + E+ ++ +M C D Y
Sbjct: 322 AADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKD 381
Query: 338 LIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELN 397
+IE C E ++EA K L+ M KG P+ T+N + + + A ++Y +M E
Sbjct: 382 VIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESR 441
Query: 398 CLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILI--LMFCEKGHWNN 455
C P+ TYN+L+ MF E D EMD+ +V TY +I L C +
Sbjct: 442 CAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRA--KE 499
Query: 456 AYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
A L++E+V K LK +V+++ L L + G LK ++ E M
Sbjct: 500 ACFLLEEVV-NKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHM 542
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 119/263 (45%), Gaps = 12/263 (4%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVA---PDKVAVSI 198
A L++ M G + T+ I + +AG+ EA F+ M G A P ++
Sbjct: 287 AMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFAL 346
Query: 199 VVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAG 257
++ +L + +AEE + PDV Y +I G C A K++ A + +M + G
Sbjct: 347 MIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKG 406
Query: 258 IKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVL 317
P++ TY+ + LC + A ++ M+++ C P+ T+N L+ + + +
Sbjct: 407 YPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAF 466
Query: 318 QVFNQMKRFNCAADTIGY----NFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
+ +M + +C D Y N L +CH +EA +L +V KG+ F+S
Sbjct: 467 NTWTEMDKRDCVQDVETYCAMINGLFDCH----RAKEACFLLEEVVNKGLKLPYRVFDSF 522
Query: 374 FGCIAKLHDVNGAHRMYAKMKEL 396
++++ ++ H++ MK+
Sbjct: 523 LMRLSEVGNLKAIHKVSEHMKKF 545
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 194/427 (45%), Gaps = 49/427 (11%)
Query: 120 PSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVH 179
P P+ +L G+ L+ M + T +LI ++ EA+
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 180 AFNRME----DYG--VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK--DRFEPDVILYT 231
F +M D G + D + + ++ LC+ R +EA+ +K +R P+ + Y
Sbjct: 351 VFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYN 410
Query: 232 SLIHGWCRAGKIERAEEI-----------------------------------FKDMKDA 256
LI G+CRAGK+E A+E+ F DM+
Sbjct: 411 CLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE 470
Query: 257 GIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKV 316
G+K NV TY +I + C + +A + +M++AGC+P+A + +L+ + R
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 317 LQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGC 376
++V ++K + D + YN LI C N E+ ++L M K+G P+S T+N++
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 377 IAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMD-ENQVEP 435
K D RM +M+E P TY ++ + +D LKL K+M ++V P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 436 NVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQ----LKM 491
N Y ILI F + G++ A L +EM + K ++PN++ Y + + L + Q LK+
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEM-KMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 492 HEELVEK 498
+E+VE+
Sbjct: 710 MDEMVEQ 716
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 170/339 (50%), Gaps = 13/339 (3%)
Query: 158 AETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF- 216
A T++ LI Y RAG A +RM++ + P+ V V+ +V +CR A FF
Sbjct: 406 AVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFM 465
Query: 217 DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCG 276
D K+ + +V+ Y +LIH C +E+A ++ M +AG P+ Y +I LC
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC--- 522
Query: 277 QITRAHD---VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTI 333
Q+ R HD V ++ + G + + + +N L+ + EKV ++ M++ D+I
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSI 582
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM 393
YN LI + ++ E +++ M + G+ P +T+ ++ + +++ A +++ M
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 394 ---KELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEK 450
++N PNT+ YNIL+ F++ + L LK+EM V PNV TY L EK
Sbjct: 643 GLHSKVN--PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK 700
Query: 451 GHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQL 489
KLM EMVE+ S +PN E ++E L + +L
Sbjct: 701 TQGETLLKLMDEMVEQ-SCEPNQITMEILMERLSGSDEL 738
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 171/378 (45%), Gaps = 49/378 (12%)
Query: 173 LAAEAVHAF-NRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF--------------- 216
L E + A +R +GV+P+ V ++ +SSLC+ RA A
Sbjct: 238 LTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPF 297
Query: 217 -----------------------DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
D VK R PDV+ LI+ C++ +++ A E+F+ M
Sbjct: 298 NALLSCLGRNMDISRMNDLVLKMDEVKIR--PDVVTLGILINTLCKSRRVDEALEVFEQM 355
Query: 254 K----DAG--IKPNVHTYSIVIDSLCRCGQITRAHDVFAEM-IDAGCNPNAVTFNSLMRV 306
+ D G IK + ++ +ID LC+ G++ A ++ M ++ C PNAVT+N L+
Sbjct: 356 RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDG 415
Query: 307 HVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPN 366
+ +AG+ E +V ++MK + + N ++ CR L AV M K+GV N
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 367 SSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKK 426
T+ ++ + +V A Y KM E C P+ Y L+ + + +++ +
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 427 EMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKA 486
++ E ++ Y +LI +FC+K + Y+++ +M E++ KP+ Y ++ K
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM-EKEGKKPDSITYNTLISFFGKH 594
Query: 487 GQLKMHEELVEKMVARGF 504
+ E ++E+M G
Sbjct: 595 KDFESVERMMEQMREDGL 612
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 143/296 (48%), Gaps = 13/296 (4%)
Query: 215 FFDSVKDRFEPDVILYTSLIHGW-CRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLC 273
++ K++ P I+ T L+ W R G + ++ +++ + D+ +K N ++V+D L
Sbjct: 139 LYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERL-DSNMK-NSQVRNVVVDVLL 196
Query: 274 RCGQITRAHDVFAEMI--DAGCNPNAVTFNSLMRVHVKAG--RTEKVLQVFNQMKRFNCA 329
R G + A V EM+ ++ PN +T + ++ K EK++ + ++ +
Sbjct: 197 RNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVS 256
Query: 330 ADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRM 389
+++ I C++ A +L+ ++K + FN++ C+ + D++ + +
Sbjct: 257 PNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 390 YAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEM------DENQVEPNVNTYRIL 443
KM E+ P+ +T IL+ +S+ +D L++ ++M D N ++ + + L
Sbjct: 317 VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTL 376
Query: 444 ILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
I C+ G A +L+ M E+ PN Y +++ +AG+L+ +E+V +M
Sbjct: 377 IDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 191/356 (53%), Gaps = 11/356 (3%)
Query: 77 SAAHPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKL 136
S+ +S RV+++ HG P Q+L F+ +A++++ F S ML + G+
Sbjct: 64 SSGIHLSKDLIDRVLKRV-RFSHGNPI-QTLEFYRYASAIRGFYHSSFSLDTMLYILGRN 121
Query: 137 RHFDLAWHLIDSMKTRGVE-ITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPD--- 192
R FD W L+ K + I+ T V++ R + + V +F + + + PD
Sbjct: 122 RKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR--LVPDFFD 179
Query: 193 KVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKD 252
+ ++ +LC+++ +A++ + S+K +F+PD+ + L+ GW E AE F++
Sbjct: 180 TACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW---KSSEEAEAFFEE 236
Query: 253 MKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGR 312
MK G+KP+V TY+ +ID C+ +I +A+ + +M + P+ +T+ +++ G+
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 313 TEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNS 372
+K +V +MK + C D YN I C L +A K+++ MVKKG++PN++T+N
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 373 IFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEM 428
F ++ +D+ + +Y +M CLPNT + L++MF + +DM ++L ++M
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 412
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 197/401 (49%), Gaps = 3/401 (0%)
Query: 105 QSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVL 164
+ L FN + +PS Y ++D K + + A L D M R + + T++ L
Sbjct: 197 KGLELFNRMKHDRIYPSVF-IYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTL 255
Query: 165 IRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RF 223
I Y +AG ++ RM+ + P + + ++ L + E+A++ +KD F
Sbjct: 256 IDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF 315
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHD 283
PD ++ L G+ K E A +++ D+G+K N +T SI++++LC+ G+I +A +
Sbjct: 316 VPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEE 375
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
+ + G PN V +N+++ + + G M++ D + YN LI C
Sbjct: 376 ILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC 435
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
+E A K +N M KGV+P+ T+N + G + ++ + + +M++ +PN +
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV 495
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
+Y L+ + + +K++M++ V P V Y +LI C KG +A++ KEM
Sbjct: 496 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555
Query: 464 VEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+ +K ++ NL Y +++ L G+L E+L+ ++ +G
Sbjct: 556 L-KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 176/358 (49%), Gaps = 6/358 (1%)
Query: 146 IDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCR 205
++ MK +GV + ET+++LI Y R + MED G P+ V+ +++ LC+
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Query: 206 KRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHT 264
+ EAQ ++DR P V +Y LI G C GKIE A K+M GI+ N+ T
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 265 YSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMK 324
Y+ +ID L G+++ A D+ E+ G P+ T+NSL+ + AG ++ + ++ +MK
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 325 RFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVN 384
R Y+ LI C E +E ++ M K P+ +N + C A D+
Sbjct: 627 RSGIKPTLKTYHLLISL-CTKEGIELTERLFGEMSLK---PDLLVYNGVLHCYAVHGDME 682
Query: 385 GAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILI 444
A + +M E + + TYN L+ + + V L EM+ ++EP +TY I++
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Query: 445 LMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
CE + +AY +EM +EK ++ + ++ L++ + K E ++ +M R
Sbjct: 743 KGHCEVKDYMSAYVWYREM-QEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGR 799
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 173/354 (48%), Gaps = 10/354 (2%)
Query: 153 GVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA 212
GV++ A T S+L+ + G +A R G+ P++V + ++ CRK A
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Query: 213 QSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDS 271
+ +++ K +PD + Y LI +C G++E AE+ MK G+ P+V TY+I+I
Sbjct: 409 RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGG 468
Query: 272 LCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
R + + D+ EM D G PN V++ +L+ K + + V M+ +
Sbjct: 469 YGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPK 528
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA 391
YN LI+ C +E+A + M+KKG+ N T+N++ ++ ++ A +
Sbjct: 529 VRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLL 588
Query: 392 KMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
++ P+ TYN L+ + + ++ + L +EM + ++P + TY +LI + ++G
Sbjct: 589 EISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Query: 452 HWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK----MHEELVEKMVA 501
+L + + E SLKP+L VY VL G ++ + ++++EK +
Sbjct: 649 -----IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIG 697
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 159/333 (47%), Gaps = 4/333 (1%)
Query: 173 LAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAE-EAQSFFDSVKDRFEPDVILYT 231
+ +EA F + + G+ P ++++++ L + ++ F + ++ F P +Y
Sbjct: 124 MISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 183
Query: 232 SLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDA 291
I + + + E+F MK I P+V Y+++ID LC+ ++ A +F EM+
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243
Query: 292 GCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEA 351
P+ +T+N+L+ + KAG EK +V +MK + I +N L++ + +E+A
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303
Query: 352 VKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRM 411
VL M G P++ TF+ +F + A +Y + N T +IL+
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNA 363
Query: 412 FAESKSIDMVLK-LKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLK 470
+ I+ + L +EM + V PN Y +I +C KG A ++ E +E++ +K
Sbjct: 364 LCKEGKIEKAEEILGREMAKGLV-PNEVIYNTMIDGYCRKGDLVGA-RMKIEAMEKQGMK 421
Query: 471 PNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
P+ Y ++ + G+++ E+ V KM +G
Sbjct: 422 PDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 145/316 (45%), Gaps = 5/316 (1%)
Query: 116 LKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAA 175
LK S E Y ++ G+ FD + ++ M+ G ++ LI +
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 176 EAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLI 234
EA MED GV+P ++++ C K + E+A F + +K E +++ Y +LI
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 235 HGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCN 294
G GK+ AE++ ++ G+KP+V TY+ +I G + R ++ EM +G
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Query: 295 PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKV 354
P T++ L+ + K G E ++F +M + D + YN ++ C+ ++E+A +
Sbjct: 632 PTLKTYHLLISLCTKEG-IELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNL 687
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
M++K + + +T+NS+ K+ + + +M P TYNI+++ E
Sbjct: 688 QKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCE 747
Query: 415 SKSIDMVLKLKKEMDE 430
K +EM E
Sbjct: 748 VKDYMSAYVWYREMQE 763
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 129/263 (49%), Gaps = 1/263 (0%)
Query: 243 IERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNS 302
I A ++F +++ GI P+ + ++++D L + Q +VF ++++ P+ +
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 303 LMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKG 362
++ VK K L++FN+MK YN LI+ C+ + + +A ++ + M+ +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 363 VAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVL 422
+ P+ T+N++ K + + ++ +MK + P+ +T+N L++ ++ ++
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 423 KLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLEL 482
+ KEM + P+ T+ IL + A + + V+ +K N +L
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD-SGVKMNAYTCSILLNA 363
Query: 483 LRKAGQLKMHEELVEKMVARGFV 505
L K G+++ EE++ + +A+G V
Sbjct: 364 LCKEGKIEKAEEILGREMAKGLV 386
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 194/455 (42%), Gaps = 78/455 (17%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D K + L +GV++ FS I YV++G A A + RM
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIE 244
G++P+ V +I++ LC+ R EA + + R EP ++ Y+SLI G+C+ G +
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSL-------------------------------- 272
+++DM G P+V Y +++D L
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 273 ---CRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHV------KAGRTEKVLQVFNQM 323
CR + A VF M G P+ TF ++MRV + K + LQ+F+ M
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLM 563
Query: 324 KR-----------------FNC------------------AADTIGYNFLIECHCRDENL 348
+R F C D + YN +I +C L
Sbjct: 564 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 623
Query: 349 EEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNIL 408
+EA ++ L+ PN+ T + + K +D++GA RM++ M E PN +TY L
Sbjct: 624 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 683
Query: 409 MRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
M F++S I+ KL +EM E + P++ +Y I+I C++G + A + + ++ K
Sbjct: 684 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK- 742
Query: 469 LKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
L P++ Y ++ K G+L L E M+ G
Sbjct: 743 LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 777
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 187/427 (43%), Gaps = 78/427 (18%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAG-------LAAEAVH------------- 179
D A+ L M+ RG+E +S LI Y +AG L ++A+H
Sbjct: 303 DRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSST 362
Query: 180 ---------------AFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-F 223
+ RM G++P+ V +I++ LC+ R EA + + R
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSL----------- 272
EP ++ Y+SLI G+C+ G + +++DM G P+V Y +++D L
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 273 ------------------------CRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHV 308
CR + A VF M G P+ TF ++MRV +
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
Query: 309 ------KAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKG 362
K + LQ+F+ M+R +AD N +I + +E+A K N +++
Sbjct: 543 MEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 602
Query: 363 VAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVL 422
+ P+ T+N++ L ++ A R++ +K PNT+T IL+ + ++ +D +
Sbjct: 603 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 662
Query: 423 KLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLEL 482
++ M E +PN TY L+ F + ++KL +EM +EK + P++ Y +++
Sbjct: 663 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM-QEKGISPSIVSYSIIIDG 721
Query: 483 LRKAGQL 489
L K G++
Sbjct: 722 LCKRGRV 728
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 135/258 (52%), Gaps = 1/258 (0%)
Query: 225 PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDV 284
P+V+ + +LI+G+C+ G+++RA ++FK M+ GI+P++ YS +ID + G + H +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 285 FAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
F++ + G + V F+S + V+VK+G V+ +M + + + Y LI+ C+
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
D + EA + ++K+G+ P+ T++S+ K ++ +Y M ++ P+ +
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
Y +L+ ++ + ++ +M + NV + LI +C ++ A K+ + M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM- 522
Query: 465 EEKSLKPNLQVYENVLEL 482
+KP++ + V+ +
Sbjct: 523 GIYGIKPDVATFTTVMRV 540
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 155/333 (46%), Gaps = 12/333 (3%)
Query: 169 VRAGLAAEAVHAFNRME----DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-F 223
V GL+ + + +R+ D G AP+ V +++ C++ + A F ++ R
Sbjct: 258 VLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGI 317
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHD 283
EPD+I Y++LI G+ +AG + ++F G+K +V +S ID + G + A
Sbjct: 318 EPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASV 377
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
V+ M+ G +PN VT+ L++ + GR + ++ Q+ + + Y+ LI+ C
Sbjct: 378 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
+ NL + M+K G P+ + + ++K + A R KM + N +
Sbjct: 438 KCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY----RILIL--MFCEKGHWNNAY 457
+N L+ + D LK+ + M ++P+V T+ R+ I+ FC+
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGL 557
Query: 458 KLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK 490
+L ++++ + ++ V V+ LL K +++
Sbjct: 558 QLF-DLMQRNKISADIAVCNVVIHLLFKCHRIE 589
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 155/374 (41%), Gaps = 81/374 (21%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A+ + + RG+E + T+S LI + + G + M G PD V ++V
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 202 SLCRKRRAEEAQSFFDSVK---DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI 258
L ++ A F SVK +V+++ SLI GWCR + + A ++F+ M GI
Sbjct: 470 GLSKQGLMLHAMRF--SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 259 KPNVHTYSIVI------DSLCR-----------------------------------CGQ 277
KP+V T++ V+ D+ C+ C +
Sbjct: 528 KPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 587
Query: 278 ITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNF 337
I A F +I+ P+ VT+N+++ + R ++ ++F +K +T+
Sbjct: 588 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 647
Query: 338 LIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKE-- 395
LI C++ +++ A+++ ++M +KG PN+ T+ + +K D+ G+ +++ +M+E
Sbjct: 648 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 707
Query: 396 ---------------------------------LNCLPNTLTYNILMRMFAESKSIDMVL 422
LP+ + Y IL+R + + +
Sbjct: 708 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 767
Query: 423 KLKKEMDENQVEPN 436
L + M N V+P+
Sbjct: 768 LLYEHMLRNGVKPD 781
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 134/282 (47%), Gaps = 7/282 (2%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE------AVHAFN 182
++D +L FD A + M G++ TF+ ++R + + + F+
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFD 561
Query: 183 RMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAG 241
M+ ++ D ++V+ L + R E+A FF++ ++ + EPD++ Y ++I G+C
Sbjct: 562 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 621
Query: 242 KIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFN 301
+++ AE IF+ +K PN T +I+I LC+ + A +F+ M + G PNAVT+
Sbjct: 622 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 681
Query: 302 SLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKK 361
LM K+ E ++F +M+ + + Y+ +I+ C+ ++EA + + +
Sbjct: 682 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 741
Query: 362 GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
+ P+ + + K+ + A +Y M P+ L
Sbjct: 742 KLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 147/356 (41%), Gaps = 74/356 (20%)
Query: 218 SVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIF------------------------KD 252
S++DR + DV + L+ CR G +++A EIF D
Sbjct: 138 SIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSD 195
Query: 253 MKD-----------AGIKPN-VHTYSIVIDSLCRCGQITRAHD----------------- 283
D GI+P+ V + V+D+L G++T+A D
Sbjct: 196 RVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSC 255
Query: 284 -----------------VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF 326
+ + ++D G PN VTF +L+ K G ++ +F M++
Sbjct: 256 NKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 327 NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGA 386
D I Y+ LI+ + + L K+ + + KGV + F+S K D+ A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 387 HRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILM 446
+Y +M PN +TY IL++ + I + ++ + +EP++ TY LI
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 447 FCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
FC+ G+ + + L ++M+ + P++ +Y +++ L K G + KM+ +
Sbjct: 436 FCKCGNLRSGFALYEDMI-KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 214/440 (48%), Gaps = 46/440 (10%)
Query: 103 FYQSLAFFNWATSLKNFPS--SPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAET 160
F +++A F+ + P + I L L G++ A L++ M +G+ I T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE---AAALVNKMVGKGLHIDVVT 263
Query: 161 FSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK 220
+ ++ + G A++ ++ME+ + PD V S ++ LC+ +AQ F +
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 221 DR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQIT 279
++ P+V Y +I G+C G+ A+ + +DM + I P+V T++ +I + + G++
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
A + EM+ P+ VT+NS++ K R + +F+ M + D + +N +I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTII 439
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
+ +CR + ++E +++L + ++G+ N++T+N++ ++ ++N A ++ +M
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 400 PNTLTYNILMRMFAESKSIDMVLKL-------------------------KKEMDE---- 430
P+T+T NIL+ F E++ ++ L+L ++DE
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Query: 431 ------NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
+ VEP+V TY ++I FC K ++A L +M ++ +P+ Y ++
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM-KDNGHEPDNSTYNTLIRGCL 618
Query: 485 KAGQLKMHEELVEKMVARGF 504
KAG++ EL+ +M + GF
Sbjct: 619 KAGEIDKSIELISEMRSNGF 638
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 151/318 (47%), Gaps = 3/318 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y M+D + A L+ M R + TF+ LI V+ G EA + M
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIER 245
+ PD V + ++ C+ R ++A+ FD + PDV+ + ++I +CRA +++
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA---SPDVVTFNTIIDVYCRAKRVDE 450
Query: 246 AEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMR 305
++ +++ G+ N TY+ +I C + A D+F EMI G P+ +T N L+
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 510
Query: 306 VHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
+ + E+ L++F ++ DT+ YN +I C+ ++EA + + GV P
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLK 425
+ T+N + ++ A+ ++ KMK+ P+ TYN L+R ++ ID ++L
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Query: 426 KEMDENQVEPNVNTYRIL 443
EM N + T +++
Sbjct: 631 SEMRSNGFSGDAFTIKMV 648
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 187/411 (45%), Gaps = 26/411 (6%)
Query: 117 KNFPSSPEPYIEMLDLAGK-----LRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRA 171
K+ PS + E +L K + D A D M TA + +I +VR
Sbjct: 60 KSLPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRM 119
Query: 172 GLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILY 230
A+ + +ME + + + +I++ C + + S F + K F+PDV+ +
Sbjct: 120 NRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTF 179
Query: 231 TSLIHGWCRAGKIERA---------------EEIFKDMKDAGIKPNVHTYSIVIDSLCRC 275
+L+HG C +I A +F M + G+ P V T++ +I+ LC
Sbjct: 180 NTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 276 GQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGY 335
G++ A + +M+ G + + VT+ +++ K G T+ L + ++M+ + D + Y
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 336 NFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKE 395
+ +I+ C+D + +A + + M++KG+APN T+N + + A R+ M E
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 396 LNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNN 455
P+ LT+N L+ + + KL EM + P+ TY +I FC+ +++
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 456 AYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVS 506
A + M P++ + ++++ +A ++ +L+ ++ RG V+
Sbjct: 420 AKHMFDLMA-----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 186/404 (46%), Gaps = 38/404 (9%)
Query: 139 FDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSI 198
F A + M G+E + T++ LI Y + G+ A G PD+
Sbjct: 302 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 361
Query: 199 VVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAG 257
++ LC + A + F +++ +P+VILY +LI G G I A ++ +M + G
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 258 IKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVL 317
+ P V T++I+++ LC+ G ++ A + MI G P+ TFN L+ + + E L
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 318 QVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI---- 373
++ + M D YN L+ C+ E+ ++ MV+KG APN TFN +
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 374 ---------------------------FGCI----AKLHDVNGAHRMYAKMKE-LNCLPN 401
FG + K D++GA+ ++ KM+E +
Sbjct: 542 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 601
Query: 402 TLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMK 461
T TYNI++ F E ++ M KL +EM + + P+ TYR+++ FC+ G+ N YK +
Sbjct: 602 TPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLL 661
Query: 462 EMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
EM+E + P+L V+ L ++ ++ +MV +G V
Sbjct: 662 EMMENGFI-PSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 179/432 (41%), Gaps = 71/432 (16%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
+ L M GV + TF+ L+R + G E +++ GV P+ ++ +
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ 259
Query: 202 SLCRKRRAEEAQSFFDSVKDRF-EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC++ + A + ++ +PDVI Y +LI+G C+ K + AE M + G++P
Sbjct: 260 GLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319
Query: 261 NVHTYSI-----------------------------------VIDSLCRCGQITRAHDVF 285
+ +TY+ +ID LC G+ RA +F
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 286 AEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMK-------------------RF 326
E + G PN + +N+L++ G + Q+ N+M +
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 327 NCAADTIG----------------YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
C +D G +N LI + +E A+++L++M+ GV P+ T+
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE 430
NS+ + K Y M E C PN T+NIL+ + +D L L +EM
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559
Query: 431 NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK 490
V P+ T+ LI FC+ G + AY L ++M E + + Y ++ + +
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVT 619
Query: 491 MHEELVEKMVAR 502
M E+L ++MV R
Sbjct: 620 MAEKLFQEMVDR 631
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 162/332 (48%), Gaps = 3/332 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L + +G++ ++ LI+ G+ EA N M + G+ P+ +I+V+
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 202 SLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC+ +A + + PD+ + LIHG+ K+E A EI M D G+ P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+V+TY+ +++ LC+ + + + M++ GC PN TFN L+ + + ++ L +
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKK-GVAPNSSTFNSIFGCIAK 379
+MK + D + + LI+ C++ +L+ A + M + V+ ++ T+N I +
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614
Query: 380 LHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNT 439
+V A +++ +M + P+ TY +++ F ++ ++++ K EM EN P++ T
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674
Query: 440 YRILILMFCEKGHWNNAYKLMKEMVEEKSLKP 471
+I C + A ++ MV +K L P
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRMV-QKGLVP 705
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 182/403 (45%), Gaps = 3/403 (0%)
Query: 105 QSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFD-LAWHLIDSMKTRGVEITAETFSV 163
++L FN F + Y +++ G F+ + L+D + G + +
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 164 LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR- 222
++ Y R G EAV+ F RM+ Y P + + ++S L ++A + ++DR
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
PDV +T + +C+ + A + +M G + NV Y V+ +
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
++F +M+ +G + TFN L+RV K G ++ ++ +++ + + YN I+
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 343 CRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
C+ L+ AV+++ ++++G P+ T+N++ + K A KM P++
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
TYN L+ + + + + ++ + N P+ TYR LI C +G N A L E
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 463 MVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
+ K +KPN+ +Y +++ L G + +L +M +G +
Sbjct: 382 AL-GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 170/380 (44%), Gaps = 2/380 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y+ + G+ A ++ + M E T +++ ++ V +G +A + RM
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIE 244
D G+ PD + +I + S C+ R A +++ + E +V+ Y +++ G+
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
E+F M +G+ + T++ ++ LC+ G + + ++I G PN T+N +
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
+ + G + +++ + D I YN LI C++ +EA L MV +G+
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
P+S T+N++ K V A R+ +P+ TY L+ + L L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
E ++PNV Y LI +G A +L EM EK L P +Q + ++ L
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM-SEKGLIPEVQTFNILVNGLC 437
Query: 485 KAGQLKMHEELVEKMVARGF 504
K G + + LV+ M+++G+
Sbjct: 438 KMGCVSDADGLVKVMISKGY 457
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 117/230 (50%), Gaps = 6/230 (2%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A ++D M GV+ T++ L+ + + + + M + G AP+ +I++
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLE 539
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDA-GIK 259
SLCR R+ +EA + +K++ PD + + +LI G+C+ G ++ A +F+ M++A +
Sbjct: 540 SLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVS 599
Query: 260 PNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV 319
+ TY+I+I + +T A +F EM+D P+ T+ ++ K G +
Sbjct: 600 SSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKF 659
Query: 320 FNQMKR--FNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
+M F + T+G +I C C ++ + EA +++ MV+KG+ P +
Sbjct: 660 LLEMMENGFIPSLTTLGR--VINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 2/172 (1%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMED-Y 187
+L+ + R D A L++ MK + V A TF LI + + G A F +ME+ Y
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 188 GVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERA 246
V+ +I++ + K A+ F + DR PD Y ++ G+C+ G +
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 247 EEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAV 298
+ +M + G P++ T VI+ LC ++ A + M+ G P AV
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 177/356 (49%), Gaps = 2/356 (0%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
R FD W M +RG+ + VL + + GL ++ + M G+ P+
Sbjct: 178 RRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIY 237
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD 255
+I + LCR + EEA+ F+ +K P++ Y+++I G+C+ G + +A ++K++
Sbjct: 238 TIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILV 297
Query: 256 AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEK 315
A + PNV + ++D C+ ++ A +F M+ G +PN +N L+ H K+G +
Sbjct: 298 AELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLE 357
Query: 316 VLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFG 375
+ + ++M+ N + D Y LI C ++ + EA ++ M + + P+S+T+NS+
Sbjct: 358 AVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIH 417
Query: 376 CIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEP 435
K +++ A + ++M PN +T++ L+ + + I + L EM + P
Sbjct: 418 GYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP 477
Query: 436 NVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKM 491
+V TY LI ++ + A +L +M+ E + PN + +++ K G+L +
Sbjct: 478 DVVTYTALIDAHFKEANMKEALRLYSDML-EAGIHPNDHTFACLVDGFWKEGRLSV 532
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 173/380 (45%), Gaps = 40/380 (10%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV 219
FS+LI ++ GL EA+ M+ +PD A +++ L R+RR + + +
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 220 KDR------------------------------------FEPDVILYTSLIHGWCRAGKI 243
R +P+V +YT I CR K+
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
E AE++F+ MK G+ PN++TYS +ID C+ G + +A+ ++ E++ A PN V F +L
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
+ KA +F M +F + YN LI HC+ N+ EAV +L+ M +
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 364 APNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLK 423
+P+ T+ + + V A+R++ KMK P++ TYN L+ + + +++ L
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 424 LKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELL 483
L EM + VEPN+ T+ LI +C A L EM K + P++ Y +++
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT-IKGIVPDVVTYTALIDAH 489
Query: 484 RKAGQLKMHEELVEKMVARG 503
K +K L M+ G
Sbjct: 490 FKEANMKEALRLYSDMLEAG 509
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 178/369 (48%), Gaps = 3/369 (0%)
Query: 114 TSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGL 173
TSL P+ I +LDL + + A + + MK GV T+S +I Y + G
Sbjct: 226 TSLGIKPNVYIYTIYILDLC-RDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGN 284
Query: 174 AAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTS 232
+A + + + P+ V +V C+ R A+S F VK +P++ +Y
Sbjct: 285 VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNC 344
Query: 233 LIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAG 292
LIHG C++G + A + +M+ + P+V TY+I+I+ LC Q+ A+ +F +M +
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404
Query: 293 CNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAV 352
P++ T+NSL+ + K E+ L + ++M + I ++ LI+ +C +++ A+
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAM 464
Query: 353 KVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMF 412
+ M KG+ P+ T+ ++ K ++ A R+Y+ M E PN T+ L+ F
Sbjct: 465 GLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524
Query: 413 AESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPN 472
+ + + + +E ++ + N + LI C+ G+ A + +M + P+
Sbjct: 525 WKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDM-RSCGITPD 583
Query: 473 LQVYENVLE 481
+ Y ++L+
Sbjct: 584 ICSYVSMLK 592
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 162/366 (44%), Gaps = 2/366 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y M+D K + A+ L + + F L+ + +A A F M
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIE 244
+GV P+ + ++ C+ EA ++ PDV YT LI+G C ++
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A +F+ MK+ I P+ TY+ +I C+ + +A D+ +EM +G PN +TF++L+
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
+ + + ++ +M D + Y LI+ H ++ N++EA+++ + M++ G+
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
PN TF + K ++ A Y + + N + + L+ ++ I +
Sbjct: 512 PNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
+M + P++ +Y ++ ++ + L +M++ L PNL V + + +
Sbjct: 572 FSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGIL-PNLLVNQLLARFYQ 630
Query: 485 KAGQLK 490
G +K
Sbjct: 631 ANGYVK 636
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 5/196 (2%)
Query: 121 SSPEPYI----EMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
S EP I ++D +R A L M +G+ T++ LI + + E
Sbjct: 438 SGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKE 497
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIH 235
A+ ++ M + G+ P+ + +V ++ R A F+ ++ + R + + +T LI
Sbjct: 498 ALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIE 557
Query: 236 GWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNP 295
G C+ G I RA F DM+ GI P++ +Y ++ + +IT + +MI G P
Sbjct: 558 GLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILP 617
Query: 296 NAVTFNSLMRVHVKAG 311
N + L R + G
Sbjct: 618 NLLVNQLLARFYQANG 633
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 180/369 (48%), Gaps = 5/369 (1%)
Query: 138 HFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVS 197
F +A ++ M G E T S LI + + +A+ ++ME+ G PD V +
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 198 IVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDA 256
++ C+ +A FD + +D D + Y SL+ G C +G+ A + +DM
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 257 GIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKV 316
I PNV T++ VID + G+ + A ++ EM +P+ T+NSL+ GR ++
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 317 LQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGC 376
Q+ + M C D + YN LI C+ + ++E K+ M ++G+ ++ T+N+I
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 358
Query: 377 IAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPN 436
+ + A ++++M + PN TY+IL+ + ++ L L + M ++++E +
Sbjct: 359 YFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Query: 437 VNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELV 496
+ TY I+I C+ G+ +A+ L + + K LKP++ Y ++ + Q + L
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSL-SCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY 474
Query: 497 EKMVARGFV 505
KM G +
Sbjct: 475 RKMQEDGLL 483
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 163/321 (50%), Gaps = 5/321 (1%)
Query: 161 FSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV- 219
FS ++ + ++ + F+ ME G+ D + +IV++ LCR R A S +
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 220 KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQIT 279
K +EPDV+ +SLI+G+C+ ++ A ++ M++ G +P+V Y+ +ID C+ G +
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
A ++F M G +AVT+NSL+ +GR ++ M + + I + +I
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
+ ++ EA+K+ M ++ V P+ T+NS+ + V+ A +M M CL
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 400 PNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKL 459
P+ +TYN L+ F +SK +D KL +EM + + + TY +I + + G + A ++
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 460 MKEMVEEKSLKPNLQVYENVL 480
M +PN++ Y +L
Sbjct: 372 FSRM----DSRPNIRTYSILL 388
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 147/297 (49%), Gaps = 1/297 (0%)
Query: 210 EEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVI 269
EE F ++ R P ++ ++ ++ ++ + +F M+ GI ++++Y+IVI
Sbjct: 52 EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVI 111
Query: 270 DSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCA 329
+ LCRC + A V +M+ G P+ VT +SL+ + R + + ++M+
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR 171
Query: 330 ADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRM 389
D + YN +I+ C+ + +AV++ + M + GV ++ T+NS+ + + A R+
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 390 YAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCE 449
M + +PN +T+ ++ +F + +KL +EM V+P+V TY LI C
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
Query: 450 KGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVS 506
G + A +++ MV + L P++ Y ++ K+ ++ +L +M RG V
Sbjct: 292 HGRVDEAKQMLDLMVTKGCL-PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 127/260 (48%), Gaps = 4/260 (1%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+ M R + TF+ +I +V+ G +EA+ + M V PD + +++
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 202 SLCRKRRAEEAQSFFD-SVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC R +EA+ D V PDV+ Y +LI+G+C++ +++ ++F++M G+
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+ TY+ +I + G+ A ++F+ M PN T++ L+ R EK L +F
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
M++ D YN +I C+ N+E+A + + KG+ P+ ++ ++ +
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Query: 381 HDVNGAHRMYAKMKELNCLP 400
+ + +Y KM+E LP
Sbjct: 465 RQWDKSDLLYRKMQEDGLLP 484
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 4/241 (1%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
+ ++D+ K F A L + M R V+ T++ LI G EA + M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIE 244
G PD V + +++ C+ +R +E F + R D I Y ++I G+ +AG+ +
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A+EIF M +PN+ TYSI++ LC ++ +A +F M + + T+N ++
Sbjct: 367 AAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
K G E +F + D + Y +I CR +++ + M + G+
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Query: 365 P 365
P
Sbjct: 484 P 484
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Query: 347 NLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYN 406
NLEE + + M++ P+ F+ + IAK + + ++ M+ + +YN
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 407 ILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEE 466
I++ + L + +M + EP+V T LI FC+ +A L+ +M EE
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM-EE 167
Query: 467 KSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+P++ +Y +++ K G + EL ++M G
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 204
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 196/407 (48%), Gaps = 3/407 (0%)
Query: 95 GAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGV 154
G +R +++ +F W P PE Y +L + + R+FD ++ M G
Sbjct: 70 GVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGF 129
Query: 155 EITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQS 214
+ T ++ V+A E M + P A + ++ + ++ +
Sbjct: 130 GPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLT 189
Query: 215 FFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLC 273
F +++ +EP V L+T+LI G+ + G+++ A + +MK + + ++ Y++ IDS
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 274 RCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTI 333
+ G++ A F E+ G P+ VT+ S++ V KA R ++ +++F +++ T
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM 393
YN +I + +EA +L KG P+ +N I C+ K+ V+ A +++ +M
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 394 KELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHW 453
K+ + PN TYNIL+ M + +D +L+ M + + PNV T I++ C+
Sbjct: 370 KK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 454 NNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
+ A + +EM + K P+ + ++++ L K G++ ++ EKM+
Sbjct: 429 DEACAMFEEM-DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 177/380 (46%), Gaps = 2/380 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
+ ++D GK+ D A+ + + M + ++ LI+ + G + + M
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIE 244
+ +PD ++ + + + E+ ++ F+ +K R F PD Y+ LIHG +AG
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
E+F MK+ G + Y+IVID C+CG++ +A+ + EM G P VT+ S++
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
K R ++ +F + K + + Y+ LI+ + ++EA +L +++KG+
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
PN T+NS+ + K ++N A + MKEL C PN +TY IL+ + + +
Sbjct: 690 PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
+EM + ++P+ +Y +I + G+ A L + P+ Y ++E L
Sbjct: 750 WQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV-PDSACYNAMIEGLS 808
Query: 485 KAGQLKMHEELVEKMVARGF 504
+ L E+ RG
Sbjct: 809 NGNRAMDAFSLFEETRRRGL 828
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 178/365 (48%), Gaps = 3/365 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSM-KTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRM 184
Y M+ + K D A + + + K R V T ++ +I Y AG EA R
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY-AYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 185 EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIE 244
G P +A + +++ L + + +EA F+ +K P++ Y LI CRAGK++
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLD 394
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A E+ M+ AG+ PNV T +I++D LC+ ++ A +F EM C P+ +TF SL+
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
K GR + +V+ +M +C ++I Y LI+ E+ K+ M+ + +
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCS 514
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
P+ N+ C+ K + M+ ++K +P+ +Y+IL+ ++ + +L
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
M E + Y I+I FC+ G N AY+L++EM + K +P + Y +V++ L
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM-KTKGFEPTVVTYGSVIDGLA 633
Query: 485 KAGQL 489
K +L
Sbjct: 634 KIDRL 638
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 194/414 (46%), Gaps = 10/414 (2%)
Query: 93 KCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTR 152
K +R G Q + F F + Y ++ + H D+ L M+
Sbjct: 145 KANKLREGYDVVQMMRKFK-------FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL 197
Query: 153 GVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA 212
G E T F+ LIR + + G A+ + M+ + D V ++ + S + + + A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 213 QSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDS 271
FF ++ + +PD + YTS+I C+A +++ A E+F+ ++ P + Y+ +I
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 272 LCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
G+ A+ + G P+ + +N ++ K G+ ++ L+VF +MK+ + A +
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPN 376
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA 391
YN LI+ CR L+ A ++ + M K G+ PN T N + + K ++ A M+
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 392 KMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
+M C P+ +T+ L+ + +D K+ ++M ++ N Y LI F G
Sbjct: 437 EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG 496
Query: 452 HWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
+ +K+ K+M+ + + P+LQ+ ++ + KAG+ + + E++ AR FV
Sbjct: 497 RKEDGHKIYKDMINQ-NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV 549
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 193/415 (46%), Gaps = 40/415 (9%)
Query: 127 IEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMED 186
I+ML AGKL D A+ L DSM+ G+ T ++++ R ++ EA F M+
Sbjct: 384 IDMLCRAGKL---DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 187 YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIER 245
PD++ ++ L + R ++A ++ + D + I+YTSLI + G+ E
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 246 AEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMR 305
+I+KDM + P++ + +D + + G+ + +F E+ P+A +++ L+
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 306 VHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
+KAG + ++F MK C DT YN +I+ C+ + +A ++L M KG P
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMK----ELNCL---------------------- 399
T+ S+ +AK+ ++ A+ ++ + K ELN +
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 400 ---------PNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEK 450
PN T+N L+ +++ I+ L + M E + PN TY ILI C+
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 451 GHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
+N A+ +EM +++ +KP+ Y ++ L KAG + L ++ A G V
Sbjct: 741 RKFNKAFVFWQEM-QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 191/404 (47%), Gaps = 15/404 (3%)
Query: 104 YQSLAFFNWATSL------KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEIT 157
Y S F+ A SL K S Y +L K+ D A + + MK +
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPN 376
Query: 158 AETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFD 217
T+++LI RAG A + M+ G+ P+ V+I+V LC+ ++ +EA + F+
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 218 SVKDRF-EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCG 276
+ + PD I + SLI G + G+++ A ++++ M D+ + N Y+ +I + G
Sbjct: 437 EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG 496
Query: 277 QITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYN 336
+ H ++ +MI+ C+P+ N+ M KAG EK +F ++K D Y+
Sbjct: 497 RKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYS 556
Query: 337 FLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKEL 396
LI + E ++ M ++G ++ +N + K VN A+++ +MK
Sbjct: 557 ILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK 616
Query: 397 NCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNA 456
P +TY ++ A+ +D L +E ++E NV Y LI F + G + A
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEA 676
Query: 457 YKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
Y +++E++ +K L PNL + ++L+ L KA EE+ E +V
Sbjct: 677 YLILEELM-QKGLTPNLYTWNSLLDALVKA------EEINEALV 713
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 148/341 (43%), Gaps = 3/341 (0%)
Query: 164 LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRF 223
++RR A E + R + P+ ++V + CR A + Q + F
Sbjct: 71 VLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALD-QILGEMSVAGF 129
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHD 283
P V ++ G +A K+ ++ + M+ +P Y+ +I +
Sbjct: 130 GPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLT 189
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
+F +M + G P F +L+R K GR + L + ++MK + AD + YN I+
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
+ ++ A K + + G+ P+ T+ S+ G + K + ++ A M+ +++ +P T
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
YN ++ + + D L + P+V Y ++ + G + A K+ +EM
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 464 VEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+K PNL Y ++++L +AG+L EL + M G
Sbjct: 370 --KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 214/440 (48%), Gaps = 46/440 (10%)
Query: 103 FYQSLAFFNWATSLKNFPS--SPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAET 160
F +++A F+ + P + I L L G++ A L++ M +G+ I T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE---AAALVNKMVGKGLHIDVVT 263
Query: 161 FSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK 220
+ ++ + G A++ ++ME+ + PD V S ++ LC+ +AQ F +
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 221 DR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQIT 279
++ P+V Y +I G+C G+ A+ + +DM + I P+V T++ +I + + G++
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
A + EM+ P+ VT+NS++ K R + +F+ M + D + +N +I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTII 439
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
+ +CR + ++E +++L + ++G+ N++T+N++ ++ ++N A ++ +M
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 400 PNTLTYNILMRMFAESKSIDMVLKL-------------------------KKEMDE---- 430
P+T+T NIL+ F E++ ++ L+L ++DE
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Query: 431 ------NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
+ VEP+V TY ++I FC K ++A L +M ++ +P+ Y ++
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM-KDNGHEPDNSTYNTLIRGCL 618
Query: 485 KAGQLKMHEELVEKMVARGF 504
KAG++ EL+ +M + GF
Sbjct: 619 KAGEIDKSIELISEMRSNGF 638
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 160/346 (46%), Gaps = 12/346 (3%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
M+D + A L+ M R + TF+ LI V+ G EA + M
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEE 248
+ PD V + ++ C+ R ++A+ FD + PDV+ + ++I +CRA +++ +
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA---SPDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 249 IFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHV 308
+ +++ G+ N TY+ +I C + A D+F EMI G P+ +T N L+
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 309 KAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSS 368
+ + E+ L++F ++ DT+ YN +I C+ ++EA + + GV P+
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 369 TFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEM 428
T+N + ++ A+ ++ KMK+ P+ TYN L+R ++ ID ++L EM
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 429 DENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQ 474
N + T ++ + C ++ E + E L+P +
Sbjct: 634 RSNGFSGDAFTIKMAEEIIC---------RVSDEEIIENYLRPKIN 670
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 187/411 (45%), Gaps = 26/411 (6%)
Query: 117 KNFPSSPEPYIEMLDLAGK-----LRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRA 171
K+ PS + E +L K + D A D M TA + +I +VR
Sbjct: 60 KSLPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRM 119
Query: 172 GLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILY 230
A+ + +ME + + + +I++ C + + S F + K F+PDV+ +
Sbjct: 120 NRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTF 179
Query: 231 TSLIHGWCRAGKIERA---------------EEIFKDMKDAGIKPNVHTYSIVIDSLCRC 275
+L+HG C +I A +F M + G+ P V T++ +I+ LC
Sbjct: 180 NTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 276 GQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGY 335
G++ A + +M+ G + + VT+ +++ K G T+ L + ++M+ + D + Y
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 336 NFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKE 395
+ +I+ C+D + +A + + M++KG+APN T+N + + A R+ M E
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 396 LNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNN 455
P+ LT+N L+ + + KL EM + P+ TY +I FC+ +++
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 456 AYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVS 506
A + M P++ + ++++ +A ++ +L+ ++ RG V+
Sbjct: 420 AKHMFDLMA-----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 126/246 (51%), Gaps = 5/246 (2%)
Query: 110 FNWATSLKNFPSSPE--PYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRR 167
F+ A + + +SP+ + ++D+ + + D L+ + RG+ T++ LI
Sbjct: 417 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 168 YVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPD 226
+ A F M +GV PD + +I++ C + EEA F+ ++ + + D
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 227 VILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFA 286
+ Y +IHG C+ K++ A ++F + G++P+V TY+++I C I+ A+ +F
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 287 EMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR--FNCAADTIGYNFLIECHCR 344
+M D G P+ T+N+L+R +KAG +K +++ ++M+ F+ A TI I C
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVS 656
Query: 345 DENLEE 350
DE + E
Sbjct: 657 DEEIIE 662
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 193/406 (47%), Gaps = 3/406 (0%)
Query: 99 HGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITA 158
H I F + + F + PS + + +L + K+ FD+ +L M+ G+
Sbjct: 56 HCIKFDDAFSLFCEMLQSRPIPSIVD-FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDL 114
Query: 159 ETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS 218
+F++LI + R + A+ +M G P V + +++ C+ R +EA S DS
Sbjct: 115 YSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDS 174
Query: 219 VKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQ 277
+ F P+V++Y ++I+G C+ + A E+F M+ GI+ + TY+ +I L G+
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 278 ITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNF 337
T A + +M+ +PN + F +L+ VK G + ++ +M R + + YN
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 338 LIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELN 397
LI C L +A + +LMV KG P+ T+N++ K V +++ +M
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 398 CLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAY 457
+ + TYN L+ + ++ +++ K+ M + V P++ TY IL+ C G A
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 458 KLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+M E +++ + ++ Y +++ L + +LK L + +G
Sbjct: 415 -VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 163/343 (47%), Gaps = 2/343 (0%)
Query: 139 FDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSI 198
F A L+DSM G ++ +I + A+ F ME G+ D V +
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 199 VVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAG 257
++S L R +A D VK + +P+VI +T+LI + + G + A ++K+M
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 258 IKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVL 317
+ PNV TY+ +I+ C G + A +F M+ GC P+ VT+N+L+ K+ R E +
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 318 QVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCI 377
++F +M D YN LI +C+ L A KV N MV GV+P+ T+N + C+
Sbjct: 345 KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 404
Query: 378 AKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNV 437
+ A M +++ + +TYNI+++ + + L + + V+P+
Sbjct: 405 CNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 464
Query: 438 NTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVL 480
Y +I C KG A KL + M +E P+ ++Y+ L
Sbjct: 465 IAYITMISGLCRKGLQREADKLCRRM-KEDGFMPSERIYDETL 506
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 140/281 (49%), Gaps = 1/281 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+ M R ++ F+ LI +V+ G EA + + M V P+ + +++
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 202 SLCRKRRAEEAQSFFD-SVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
C +A+ FD V PDV+ Y +LI G+C++ ++E ++F +M G+
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+ TY+ +I C+ G++ A VF M+D G +P+ VT+N L+ G+ EK L +
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+++ D I YN +I+ CR + L+EA + + +KGV P++ + ++ + +
Sbjct: 418 EDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMV 421
A ++ +MKE +P+ Y+ +R S S +++
Sbjct: 478 GLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAELI 518
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 148/298 (49%), Gaps = 2/298 (0%)
Query: 210 EEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIV 268
++A S F + ++ R P ++ +T ++ + K + ++ M++ GI ++++++I+
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 269 IDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNC 328
I CRC +++ A + +M+ G P+ VT SL+ + R ++ + + + M F
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 329 AADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHR 388
+ + YN +I C++ +L A++V M KKG+ ++ T+N++ ++ A R
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 389 MYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFC 448
+ M + PN + + L+ F + ++ L KEM V PNV TY LI FC
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 449 EKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVS 506
G +A K M +++ K P++ Y ++ K+ +++ +L +M +G V
Sbjct: 301 IHGCLGDA-KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 110/231 (47%), Gaps = 1/231 (0%)
Query: 275 CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIG 334
C + A +F EM+ + P+ V F ++ V K + + V+ ++++M+ + D
Sbjct: 57 CIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 116
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMK 394
+ LI C CR L A+ +L M+K G P+ T S+ + + A + M
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 395 ELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWN 454
+PN + YN ++ +++ ++ L++ M++ + + TY LI G W
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 455 NAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
+A +L+++MV+ K + PN+ + +++ K G L L ++M+ R V
Sbjct: 237 DAARLLRDMVKRK-IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 207/439 (47%), Gaps = 22/439 (5%)
Query: 78 AAHPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLR 137
A P+ P ++ +I I+ + FF WA+ + S E + ++D+ +
Sbjct: 50 ALEPLVPFLSKNIITS--VIKDEVNRQLGFRFFIWASRRER-LRSRESFGLVIDMLSEDN 106
Query: 138 HFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVS 197
DL W ++ +K+ GV + + F VLI Y + G+A +AV +F RM+++ PD +
Sbjct: 107 GCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYN 166
Query: 198 IVVSSLCRKRRAEEAQSFF--------DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEI 249
+++ + R+ + FF + +K P++ + L+ G + G+ A+++
Sbjct: 167 VILRVMMRE------EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKM 220
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVK 309
F DM GI PN TY+I+I LC+ G A +F EM +G P++V N+L+ K
Sbjct: 221 FDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCK 280
Query: 310 AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSST 369
GR + ++ ++ GY+ LI+ R +A ++ M+KK + P+
Sbjct: 281 LGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIIL 340
Query: 370 FNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMD 429
+ + ++K + A ++ + M P+T YN +++ ++ L+ EM
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS 400
Query: 430 ENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQL 489
E + P+ T+ ILI C G A ++ E +E+ P++ + +++ L K+G+L
Sbjct: 401 ETESFPDACTHTILICSMCRNGLVREAEEIFTE-IEKSGCSPSVATFNALIDGLCKSGEL 459
Query: 490 KMHEELVEKMVARGFVSRP 508
K L+ KM V RP
Sbjct: 460 KEARLLLHKME----VGRP 474
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 153/383 (39%), Gaps = 81/383 (21%)
Query: 127 IEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMED 186
I+ L AGK+ A L+ SM ++G+ ++ +I+ GL E M +
Sbjct: 345 IQGLSKAGKIED---ALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSE 401
Query: 187 YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIER 245
PD +I++ S+CR EA+ F + K P V + +LI G C++G+++
Sbjct: 402 TESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKE 461
Query: 246 AEEIFKDMK---------------------------------------DAGIKPNVHTYS 266
A + M+ D G P++ +Y+
Sbjct: 462 ARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYN 521
Query: 267 IVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF 326
++I+ CR G I A + + G +P++VT+N+L+ + GR E+ ++F F
Sbjct: 522 VLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDF 581
Query: 327 NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGA 386
+ Y L+ CR + + NL +K
Sbjct: 582 RHSPAV--YRSLMTWSCRK---RKVLVAFNLWMK-------------------------- 610
Query: 387 HRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILM 446
+K+++CL + T N + + F E ++ + L+ E+D + E + Y I ++
Sbjct: 611 -----YLKKISCLDDE-TANEIEQCFKEGET-ERALRRLIELDTRKDELTLGPYTIWLIG 663
Query: 447 FCEKGHWNNAYKLMKEMVEEKSL 469
C+ G ++ A + + E+K L
Sbjct: 664 LCQSGRFHEALMVFSVLREKKIL 686
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 196/408 (48%), Gaps = 13/408 (3%)
Query: 90 VIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSM 149
V+E +R+ + + FF WA + + S Y M+ + GK+R FD AW LID M
Sbjct: 130 VVEILSRVRN--DWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEM 187
Query: 150 KTRGVE-ITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR 208
+ + ++T ++IR+Y +A++ F+ + + + ++S+LCR +
Sbjct: 188 RKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKN 247
Query: 209 AEEAQSFFDSVKDRFEPDVILYTSLIHGWCRA-GKIERAEEIFKDMKDAGIKPNVHTYSI 267
+A KD++ D + +++GWC G AE ++ +M + G+K +V +YS
Sbjct: 248 VSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSS 307
Query: 268 VIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR-F 326
+I + G + + +F M P+ +N+++ KA + + M+
Sbjct: 308 MISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEK 367
Query: 327 NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGA 386
+ + YN LI+ C+ EEA +V + M++KG+ P T+++ + +V
Sbjct: 368 GIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV--- 424
Query: 387 HRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILM 446
+ AKM+++ C P TY +L+R + D VL L EM E V P++++Y ++I
Sbjct: 425 FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHG 484
Query: 447 FCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEE 494
G AY KEM ++K ++PN ENV ++++ K + E
Sbjct: 485 LFLNGKIEEAYGYYKEM-KDKGMRPN----ENVEDMIQSWFSGKQYAE 527
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 119/256 (46%), Gaps = 9/256 (3%)
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM---RVHVKA 310
K G +V Y +I L + + A + EM +P+ V +L+ R +
Sbjct: 153 KQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAV 210
Query: 311 GRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP-NSST 369
K + F+ KRF + L+ CR +N+ +A ++ K P ++ +
Sbjct: 211 HDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKS 268
Query: 370 FNSIF-GCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEM 428
FN + G + A R++ +M + + ++Y+ ++ +++ S++ VLKL M
Sbjct: 269 FNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRM 328
Query: 429 DENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQ 488
+ +EP+ Y ++ + + A LMK M EEK ++PN+ Y ++++ L KA +
Sbjct: 329 KKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARK 388
Query: 489 LKMHEELVEKMVARGF 504
+ +++ ++M+ +G
Sbjct: 389 TEEAKQVFDEMLEKGL 404
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 182/389 (46%), Gaps = 27/389 (6%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
D A L D M +G + TF +L+R Y +AGL + + N ME +GV P+KV + +
Sbjct: 164 DAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTI 223
Query: 200 VSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMK-DAG 257
VSS CR+ R ++++ + +++ PD++ + S I C+ GK+ A IF DM+ D
Sbjct: 224 VSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEY 283
Query: 258 I---KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTE 314
+ +PN TY++++ C+ G + A +F + + + ++N ++ V+ G+
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFI 343
Query: 315 KVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIF 374
+ V QM YN L++ C+ L +A ++ LM + GV P++ T+ +
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 375 GCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVE 434
+ V+ A + +M NCLPN T NIL+ + I +L ++M+E
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463
Query: 435 PNVNTYRILILMFCEKGHWNNAYKLMKEM----------------------VEEKSLKPN 472
+ T I++ C G + A +++K M + E + P+
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523
Query: 473 LQVYENVLELLRKAGQLKMHEELVEKMVA 501
L Y +L L KAG+ + L +M+
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKNLFAEMMG 552
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 184/399 (46%), Gaps = 28/399 (7%)
Query: 132 LAGKLRH--FDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGV 189
L G +RH F A ++ M +G+ + ++++L+ + G+ ++A M+ GV
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392
Query: 190 APDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEE 248
PD V ++ C + + A+S + +++ P+ L+H + G+I AEE
Sbjct: 393 CPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEE 452
Query: 249 IFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM-------------------- 288
+ + M + G + T +I++D LC G++ +A ++ M
Sbjct: 453 LLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVD 512
Query: 289 ---IDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRD 345
I+ C P+ +T+++L+ KAGR + +F +M D++ YN I C+
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Query: 346 ENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTY 405
+ A +VL M KKG + T+NS+ + + + H + +MKE PN TY
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632
Query: 406 NILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVE 465
N ++ E + ++ L EM + + PNV +++ LI FC+ ++ A ++ + V
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVS 692
Query: 466 EKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
K L Y + L AGQL EL+E ++ RGF
Sbjct: 693 ICGQKEGL--YSLMFNELLAAGQLLKATELLEAVLDRGF 729
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 186/375 (49%), Gaps = 13/375 (3%)
Query: 141 LAWHLIDSMKTRGVE----ITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
LAW + + + E I+ + + R VRA + E N + + K++
Sbjct: 18 LAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSS 77
Query: 197 SI-VVSSLCRKRRAEEAQSFFDSVKDRF---EPDVILYTSLIHGWCRAGKIERAEEIFKD 252
+ VVS + ++A F V+ RF +P V LY L+ + ++E ++KD
Sbjct: 78 LLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKD 137
Query: 253 MKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGR 312
M GI P +T++++I +LC + A ++F EM + GC PN TF L+R + KAG
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197
Query: 313 TEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNS 372
T+K L++ N M+ F + + YN ++ CR+ +++ K++ M ++G+ P+ TFNS
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257
Query: 373 IFGCIAKLHDVNGAHRMYAKMKELNCL----PNTLTYNILMRMFAESKSIDMVLKLKKEM 428
+ K V A R+++ M+ L PN++TYN++++ F + ++ L + +
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317
Query: 429 DENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQ 488
EN ++ +Y I + G + A ++K+M +K + P++ Y +++ L K G
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT-DKGIGPSIYSYNILMDGLCKLGM 376
Query: 489 LKMHEELVEKMVARG 503
L + +V M G
Sbjct: 377 LSDAKTIVGLMKRNG 391
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 185/393 (47%), Gaps = 9/393 (2%)
Query: 119 FPSS-PEPYIE--MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAA 175
FP + P Y+ +L+ K R + L M G+ TF++LIR +
Sbjct: 105 FPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVD 164
Query: 176 EAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLI 234
A F+ M + G P++ I+V C+ ++ ++++ P+ ++Y +++
Sbjct: 165 AARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV 224
Query: 235 HGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM-IDAGC 293
+CR G+ + +E++ + M++ G+ P++ T++ I +LC+ G++ A +F++M +D
Sbjct: 225 SSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Query: 294 N---PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEE 350
PN++T+N +++ K G E +F ++ + A YN ++ R E
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIE 344
Query: 351 AVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMR 410
A VL M KG+ P+ ++N + + KL ++ A + MK P+ +TY L+
Sbjct: 345 AETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLH 404
Query: 411 MFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLK 470
+ +D L +EM N PN T IL+ + G + A +L+++M EK
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKM-NEKGYG 463
Query: 471 PNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+ +++ L +G+L E+V+ M G
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 107/272 (39%), Gaps = 35/272 (12%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA-QSFFDS 218
T+S L+ +AG AEA + F M + PD VA +I + C++ + A + D
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585
Query: 219 VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
K + Y SLI G +I + +MK+ GI PN+ TY+ I LC ++
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVK----------------------------- 309
A ++ EM+ PN +F L+ K
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMF 705
Query: 310 -----AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
AG+ K ++ + T Y L+E C+ + LE A +L+ M+ +G
Sbjct: 706 NELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYG 765
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKEL 396
+ + + + K+ + A+ KM E+
Sbjct: 766 FDPAALMPVIDGLGKMGNKKEANSFADKMMEM 797
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
P+ +N + K V +Y M P T T+N+L+R +S +D +L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
EM E +PN T+ IL+ +C+ G + +L+ M E + PN +Y ++
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM-ESFGVLPNKVIYNTIVSSFC 228
Query: 485 KAGQLKMHEELVEKMVARGFV 505
+ G+ E++VEKM G V
Sbjct: 229 REGRNDDSEKMVEKMREEGLV 249
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 69/148 (46%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
L+D MK +G+ T++ I+ +A + + M +AP+ + ++ + C
Sbjct: 616 LMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFC 675
Query: 205 RKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHT 264
+ + AQ F++ LY+ + + AG++ +A E+ + + D G +
Sbjct: 676 KVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFL 735
Query: 265 YSIVIDSLCRCGQITRAHDVFAEMIDAG 292
Y +++SLC+ ++ A + +MID G
Sbjct: 736 YKDLVESLCKKDELEVASGILHKMIDRG 763
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 188/381 (49%), Gaps = 1/381 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y M+D K + A L + MK RG+ T++ +I + + G + V F M+
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIE 244
D PD + + +++ C+ + F+ +K + +P+V+ Y++L+ +C+ G ++
Sbjct: 325 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
+A + + DM+ G+ PN +TY+ +ID+ C+ G ++ A + EM+ G N VT+ +L+
Sbjct: 385 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 444
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
A R ++ ++F +M + YN LI + +N++ A+++LN + +G+
Sbjct: 445 DGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK 504
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
P+ + + + L + A + +MKE N+L Y LM + +S + L L
Sbjct: 505 PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHL 564
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
EM E +E V T+ +LI C+ + A + + L+ N ++ +++ L
Sbjct: 565 LDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 624
Query: 485 KAGQLKMHEELVEKMVARGFV 505
K Q++ L E+MV +G V
Sbjct: 625 KDNQVEAATTLFEQMVQKGLV 645
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 195/451 (43%), Gaps = 64/451 (14%)
Query: 106 SLAFFNWATSLKNFPSSPEPYI--------------------EMLDLAGKLRHFDLAWHL 145
+ FF W+ + F S E Y EM+ FD+ W
Sbjct: 125 AFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLW-- 182
Query: 146 IDSMKTRGVEITA-ETFSVLIRRYVRAGLAAEAVHAFNRMEDY----------------- 187
TR V + F L + G+ EA+ F++M+ +
Sbjct: 183 ----STRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFA 238
Query: 188 ------------------GVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVI 228
G P +I++ +C++ E A+ F+ +K R PD +
Sbjct: 239 KLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTV 298
Query: 229 LYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM 288
Y S+I G+ + G+++ F++MKD +P+V TY+ +I+ C+ G++ + + EM
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 289 IDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL 348
G PN V++++L+ K G ++ ++ + M+R + Y LI+ +C+ NL
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Query: 349 EEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNIL 408
+A ++ N M++ GV N T+ ++ + + A ++ KM +PN +YN L
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478
Query: 409 MRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
+ F ++K++D L+L E+ ++P++ Y I C A +M EM +E
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM-KECG 537
Query: 469 LKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
+K N +Y +++ K+G L+++M
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 161/377 (42%), Gaps = 18/377 (4%)
Query: 69 LALEFSRLSAAHPISP-----STARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSP 123
+ LEF R + + P ST K G ++ I FY ++ P
Sbjct: 350 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY---------VDMRRVGLVP 400
Query: 124 E--PYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAF 181
Y ++D K+ + A+ L + M GVE T++ LI A EA F
Sbjct: 401 NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF 460
Query: 182 NRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRA 240
+M+ GV P+ + + ++ + + + A + +K R +PD++LY + I G C
Sbjct: 461 GKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSL 520
Query: 241 GKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTF 300
KIE A+ + +MK+ GIK N Y+ ++D+ + G T + EM + VTF
Sbjct: 521 EKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTF 580
Query: 301 NSLMRVHVKAGRTEKVLQVFNQMKR-FNCAADTIGYNFLIECHCRDENLEEAVKVLNLMV 359
L+ K K + FN++ F A+ + +I+ C+D +E A + MV
Sbjct: 581 CVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMV 640
Query: 360 KKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSID 419
+KG+ P+ + + S+ K +V A + KM E+ + L Y L+ + +
Sbjct: 641 QKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQ 700
Query: 420 MVLKLKKEMDENQVEPN 436
+EM + P+
Sbjct: 701 KARSFLEEMIGEGIHPD 717
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 114/244 (46%), Gaps = 1/244 (0%)
Query: 260 PNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV 319
P + + L G + A F++M P + N L+ K G+T+ V +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 320 FNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAK 379
F M YN +I+C C++ ++E A + M +G+ P++ T+NS+ K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 380 LHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNT 439
+ ++ + +MK++ C P+ +TYN L+ F + + + L+ +EM N ++PNV +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 440 YRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
Y L+ FC++G A K +M L PN Y ++++ K G L L +M
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDM-RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 500 VARG 503
+ G
Sbjct: 429 LQVG 432
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 1/281 (0%)
Query: 225 PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDV 284
P ++ +L G +E A + F MK + P + + ++ + G+
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 285 FAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
F +MI AG P T+N ++ K G E +F +MK DT+ YN +I+ +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
L++ V M P+ T+N++ C K + Y +MK PN ++
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
Y+ L+ F + + +K +M + PN TY LI C+ G+ ++A++L EM+
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 465 EEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
+ ++ N+ Y +++ L A ++K EEL KM G +
Sbjct: 430 -QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI 469
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 119/278 (42%), Gaps = 12/278 (4%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV 194
K ++ D A L++ +K RG++ + I A N M++ G+ + +
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
+ ++ + + E D +K+ E V+ + LI G C+ + +A + F +
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 603
Query: 254 -KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGR 312
D G++ N ++ +ID LC+ Q+ A +F +M+ G P+ + SLM + K G
Sbjct: 604 SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 663
Query: 313 TEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNS 372
+ L + ++M D + Y L+ L++A L M+ +G+ P+ S
Sbjct: 664 VLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCIS 723
Query: 373 I------FGCI---AKLHDVNGAHRMYAKMKELNCLPN 401
+ GCI +L H++ + N LPN
Sbjct: 724 VLKKHYELGCIDEAVELQSYLMKHQLLTSDND-NALPN 760
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 181/399 (45%), Gaps = 37/399 (9%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A+ L D M +G + + T++VLI+ GL +A + F+ M G P+ ++++
Sbjct: 285 AFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLID 344
Query: 202 SLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LCR + EEA VKDR P VI Y +LI+G+C+ G++ A E+ M+ KP
Sbjct: 345 GLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKP 404
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
NV T++ +++ LCR G+ +A + M+D G +P+ V++N L+ + G ++
Sbjct: 405 NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSST----------- 369
+ M F+ D + + +I C+ + A L LM++KG++ + T
Sbjct: 465 SSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKV 524
Query: 370 ------------------------FNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTY 405
N I ++K V M K+ +L +P+ +TY
Sbjct: 525 GKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTY 584
Query: 406 NILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVE 465
L+ S I ++ + M + PNV Y I+I C+ G A KL+ M +
Sbjct: 585 TTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM-Q 643
Query: 466 EKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+ + PN Y +++ G+L E V MV RG+
Sbjct: 644 DSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGY 682
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 164/354 (46%), Gaps = 3/354 (0%)
Query: 153 GVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA 212
G + +S L+ + L A + RME G + +V++LC+ E A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 213 QSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM-KDAGIKPNVHTYSIVID 270
+ F + K F D + TSL+ G+CR + A ++F M K+ PN +YSI+I
Sbjct: 215 EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIH 274
Query: 271 SLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAA 330
LC G++ A + +M + GC P+ T+ L++ G +K +F++M C
Sbjct: 275 GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKP 334
Query: 331 DTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMY 390
+ Y LI+ CRD +EEA V MVK + P+ T+N++ K V A +
Sbjct: 335 NVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELL 394
Query: 391 AKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEK 450
M++ C PN T+N LM + L K M +N + P++ +Y +LI C +
Sbjct: 395 TVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCRE 454
Query: 451 GHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
GH N AYKL+ M ++P+ + ++ K G+ + + M+ +G
Sbjct: 455 GHMNTAYKLLSSM-NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 178/357 (49%), Gaps = 7/357 (1%)
Query: 153 GVEITAETFSVLIRRYVRAGLAAEAVHAFNRM-EDYGVAPDKVAVSIVVSSLCRKRRAEE 211
G + + + L+ + R +A+ F+ M ++ AP+ V+ SI++ LC R EE
Sbjct: 225 GFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEE 284
Query: 212 AQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVID 270
A D + ++ +P YT LI C G I++A +F +M G KPNVHTY+++ID
Sbjct: 285 AFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLID 344
Query: 271 SLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAA 330
LCR G+I A+ V +M+ P+ +T+N+L+ + K GR ++ M++ C
Sbjct: 345 GLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKP 404
Query: 331 DTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMY 390
+ +N L+E CR +AV +L M+ G++P+ ++N + + + +N A+++
Sbjct: 405 NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Query: 391 AKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEK 450
+ M + P+ LT+ ++ F + D+ M + + T LI C+
Sbjct: 465 SSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKV 524
Query: 451 GHWNNAYKLMKEMVEEKSLKP--NLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
G +A +++ +V+ + L +L V +L++L K ++K ++ K+ G V
Sbjct: 525 GKTRDALFILETLVKMRILTTPHSLNV---ILDMLSKGCKVKEELAMLGKINKLGLV 578
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 178/393 (45%), Gaps = 7/393 (1%)
Query: 118 NFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEA 177
N+P Y +L KL LA+ M+ G + + ++ + G A
Sbjct: 159 NYPC----YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 178 VHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFE--PDVILYTSLIH 235
+++ G D + ++ CR +A FD + P+ + Y+ LIH
Sbjct: 215 EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIH 274
Query: 236 GWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNP 295
G C G++E A + M + G +P+ TY+++I +LC G I +A ++F EMI GC P
Sbjct: 275 GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKP 334
Query: 296 NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVL 355
N T+ L+ + G+ E+ V +M + I YN LI +C+D + A ++L
Sbjct: 335 NVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELL 394
Query: 356 NLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAES 415
+M K+ PN TFN + + ++ A + +M + P+ ++YN+L+
Sbjct: 395 TVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCRE 454
Query: 416 KSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQV 475
++ KL M+ +EP+ T+ +I FC++G + A + M+ K + +
Sbjct: 455 GHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLML-RKGISLDEVT 513
Query: 476 YENVLELLRKAGQLKMHEELVEKMVARGFVSRP 508
+++ + K G+ + ++E +V ++ P
Sbjct: 514 GTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 186/428 (43%), Gaps = 64/428 (14%)
Query: 122 SPE--PYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVH 179
SP+ Y ++D + H + A+ L+ SM +E TF+ +I + + G A A
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASA 497
Query: 180 AFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-------------------- 219
M G++ D+V + ++ +C+ + +A +++
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLS 557
Query: 220 ----------------KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
K P V+ YT+L+ G R+G I + I + MK +G PNV+
Sbjct: 558 KGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVY 617
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
Y+I+I+ LC+ G++ A + + M D+G +PN VT+ +++ +V G+ ++ L+ M
Sbjct: 618 PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAM 677
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDV 383
+ Y+ L++ ++ +KG+ ++S +++ + D
Sbjct: 678 VERGYELNDRIYSSLLQGF--------------VLSQKGI--DNSEESTVSDIALRETDP 721
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNV---NTY 440
+ + + +++L + L ++ R+ E ++ + ++ +N +E V
Sbjct: 722 ECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDE-----SNDLVQNVLERGVFLEKAM 776
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELV-EKM 499
I++ +C K +L+ +V + P+ + + V++ L+K G + ELV E +
Sbjct: 777 DIIMESYCSKKKHTKCMELIT-LVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELL 835
Query: 500 VARGFVSR 507
+ G V +
Sbjct: 836 TSNGVVEK 843
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 192/400 (48%), Gaps = 4/400 (1%)
Query: 105 QSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVL 164
++ F + FPS E + ++L K+ FDL L + M+ G+ T+S+
Sbjct: 58 DAIGLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 165 IRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRF 223
I + R + A+ +M G P V ++ +++ C R EA + D V+ +
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHD 283
+PD + +T+L+HG + K A + + M G +P++ TY VI+ LC+ G+ A +
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
+ +M + V +N+++ K + +FN+M+ D YN LI C C
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM-KELNCLPNT 402
+A ++L+ M++K + P+ FN++ K + A ++Y +M K +C P+
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
+ YN L++ F + K ++ +++ +EM + + N TY LI F + +NA + K+
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 463 MVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
MV + + P++ Y +L+ L G ++ + E M R
Sbjct: 417 MVSD-GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 181/402 (45%), Gaps = 38/402 (9%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+D M G + TF+ L+ + A+EAV RM G PD V V++
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 202 SLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC++ + A + + + K + E DV++Y ++I G C+ ++ A ++F M+ GIKP
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAG---------------------------- 292
+V TY+ +I LC G+ + A + ++M++
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 293 --------CNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
C P+ V +N+L++ K R E+ ++VF +M + +T+ Y LI +
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
+ + A V MV GV P+ T+N + + +V A ++ M++ + + +T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
Y ++ ++ ++ L + V+PNV TY ++ FC KG A L EM
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Query: 465 EEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVS 506
E+ L PN Y ++ + G EL+++M + GF
Sbjct: 524 EDGPL-PNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAG 564
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 157/324 (48%), Gaps = 2/324 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D K +H D A+ L + M+T+G++ T++ LI G ++A + M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRF-EPDVILYTSLIHGWCRAGKI 243
+ + PD V + ++ + ++ + EA+ +D VK + PDV+ Y +LI G+C+ ++
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
E E+F++M G+ N TY+ +I + A VF +M+ G +P+ +T+N L
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
+ G E L VF M++ + D + Y +IE C+ +E+ + + KGV
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 364 APNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLK 423
PN T+ ++ + A ++ +MKE LPN+ TYN L+R +
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 424 LKKEMDENQVEPNVNTYRILILMF 447
L KEM + +T+ ++ M
Sbjct: 553 LIKEMRSCGFAGDASTFGLVTNML 576
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 149/326 (45%), Gaps = 2/326 (0%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
DLA +L++ M+ +E ++ +I + +A FN+ME G+ PD + +
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 200 VSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM-KDAG 257
+S LC R +A D ++ PD++ + +LI + + GK+ AE+++ +M K
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 258 IKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVL 317
P+V Y+ +I C+ ++ +VF EM G N VT+ +L+ +A +
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 318 QVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCI 377
VF QM D + YN L++ C + N+E A+ V M K+ + + T+ ++ +
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 378 AKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNV 437
K V ++ + PN +TY +M F + L EM E+ PN
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531
Query: 438 NTYRILILMFCEKGHWNNAYKLMKEM 463
TY LI G + +L+KEM
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEM 557
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 152/335 (45%), Gaps = 1/335 (0%)
Query: 176 EAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLI 234
+A+ F M P V S ++S++ + + + S + +++ ++ Y+ I
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 235 HGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCN 294
+ +CR ++ A I M G P++ T + +++ C +I+ A + +M++ G
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 295 PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKV 354
P+ VTF +L+ + + + + + +M C D + Y +I C+ + A+ +
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
LN M K + + +N+I + K ++ A ++ KM+ P+ TYN L+
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 415 SKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQ 474
+L +M E + P++ + LI F ++G A KL EMV+ K P++
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357
Query: 475 VYENVLELLRKAGQLKMHEELVEKMVARGFVSRPL 509
Y +++ K +++ E+ +M RG V +
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 392
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
+D L++A+ + MVK P+ F+ + IAK++ + + +M+ L N
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
TY+I + F + + L + +M + P++ T L+ FC + A L+ +M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 464 VEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
V E +P+ + ++ L + + LVE+MV +G
Sbjct: 172 V-EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 210
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 189/393 (48%), Gaps = 3/393 (0%)
Query: 99 HGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITA 158
H I F +L F PS + + +L KL ++ L ++ G+
Sbjct: 56 HSIKFNDALTLFCDMAESHPLPSIVD-FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDL 114
Query: 159 ETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS 218
+F+ LI + R + A+ +M G P V +V+ C R EA S D
Sbjct: 115 YSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQ 174
Query: 219 VKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQ 277
+ +EP+V++Y ++I C G++ A ++ K MK GI+P+V TY+ +I L G
Sbjct: 175 IVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGT 234
Query: 278 ITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNF 337
+ + ++M+ G +P+ +TF++L+ V+ K G+ + + +N+M + + + + YN
Sbjct: 235 WGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNS 294
Query: 338 LIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELN 397
LI C L+EA KVLN++V KG PN+ T+N++ K V+ ++ M
Sbjct: 295 LINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDG 354
Query: 398 CLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAY 457
+T TYN L + + ++ K+ M V P++ T+ IL+ C+ G A
Sbjct: 355 VDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL 414
Query: 458 KLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK 490
++++ + K++ + Y +++ L KA +++
Sbjct: 415 VRLEDLQKSKTV-VGIITYNIIIKGLCKADKVE 446
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 156/331 (47%), Gaps = 1/331 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+D + G E ++ +I G A+ M+ G+ PD V + +++
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Query: 202 SLCRKRR-AEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
L A+ D ++ PDVI +++LI + + G++ A++ + +M + P
Sbjct: 228 RLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNP 287
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
N+ TY+ +I+ LC G + A V ++ G PNAVT+N+L+ + KA R + +++
Sbjct: 288 NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
M R DT YN L + +C+ A KVL MV GV P+ TFN + +
Sbjct: 348 CVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDH 407
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
+ A +++ + +TYNI+++ ++ ++ L + V P+V TY
Sbjct: 408 GKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKP 471
+++ K W A++L ++M +E L P
Sbjct: 468 ITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 134/290 (46%), Gaps = 36/290 (12%)
Query: 215 FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
F D + P ++ ++ L+ + K E +F+ ++ GI ++++++ +ID CR
Sbjct: 67 FCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCR 126
Query: 275 CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIG 334
C +++ A +M+ G P+ VTF SL + F + RF
Sbjct: 127 CARLSLALSCLGKMMKLGFEPSIVTFGSL-------------VNGFCHVNRF-------- 165
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMK 394
EA+ +++ +V G PN +N+I + + VN A + MK
Sbjct: 166 --------------YEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211
Query: 395 ELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWN 454
++ P+ +TYN L+ S + + ++ +M + P+V T+ LI ++ ++G
Sbjct: 212 KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLL 271
Query: 455 NAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
A K EM++ +S+ PN+ Y +++ L G L ++++ +V++GF
Sbjct: 272 EAKKQYNEMIQ-RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 186/421 (44%), Gaps = 41/421 (9%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D K + L +GV++ FS I YV++G A A + RM
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIE 244
G++P+ V +I++ LC+ R EA + + R EP ++ Y+SLI G+C+ G +
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSL-------------------------------- 272
+++DM G P+V Y +++D L
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 273 ---CRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCA 329
CR + A VF M G P+ TF ++MRV + GR E+ L +F +M +
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Query: 330 ADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRM 389
D + Y LI+ C+ +++ +LM + ++ + + N + + K H + A +
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 623
Query: 390 YAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCE 449
+ + E P+ +TYN ++ + + +D ++ + + PN T ILI + C+
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
Query: 450 KGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKA----GQLKMHEELVEKMVARGFV 505
+ A ++ M E+ S KPN Y +++ K+ G K+ EE+ EK ++ V
Sbjct: 684 NNDMDGAIRMFSIMAEKGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 742
Query: 506 S 506
S
Sbjct: 743 S 743
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 183/400 (45%), Gaps = 41/400 (10%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A+ + + RG+E + T+S LI + + G + M G PD V ++V
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 202 SLCRKRRAEEAQSFFDSVK---DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI 258
L ++ A F SVK +V+++ SLI GWCR + + A ++F+ M GI
Sbjct: 470 GLSKQGLMLHAMRF--SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 259 KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
KP+V T++ V+ G++ A +F M G P+A+ + +L+ K + LQ
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ 587
Query: 319 VFNQMKR-----------------FNC------------------AADTIGYNFLIECHC 343
+F+ M+R F C D + YN +I +C
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
L+EA ++ L+ PN+ T + + K +D++GA RM++ M E PN +
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
TY LM F++S I+ KL +EM E + P++ +Y I+I C++G + A + +
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767
Query: 464 VEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
++ K L P++ Y ++ K G+L L E M+ G
Sbjct: 768 IDAK-LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 806
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 143/280 (51%), Gaps = 1/280 (0%)
Query: 225 PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDV 284
P+V+ + +LI+G+C+ G+++RA ++FK M+ GI+P++ YS +ID + G + H +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 285 FAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
F++ + G + V F+S + V+VK+G V+ +M + + + Y LI+ C+
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
D + EA + ++K+G+ P+ T++S+ K ++ +Y M ++ P+ +
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
Y +L+ ++ + ++ +M + NV + LI +C ++ A K+ + M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM- 522
Query: 465 EEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+KP++ + V+ + G+L+ L +M G
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 154/357 (43%), Gaps = 37/357 (10%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DS 218
TF LI + + G A F ME G+ PD +A S ++ + F +
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 219 VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
+ + DV++++S I + ++G + A ++K M GI PNV TY+I+I LC+ G+I
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGY--- 335
A ++ +++ G P+ VT++SL+ K G ++ M + D + Y
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 336 --------------------------------NFLIECHCRDENLEEAVKVLNLMVKKGV 363
N LI+ CR +EA+KV LM G+
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 364 APNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLK 423
P+ +TF ++ + A ++ +M ++ P+ L Y L+ F + + L+
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ 587
Query: 424 LKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVL 480
L M N++ ++ ++I + + +A K ++E K ++P++ Y ++
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK-MEPDIVTYNTMI 643
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 160/380 (42%), Gaps = 43/380 (11%)
Query: 93 KCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTR 152
KCG +R G Y+ + + P Y ++D K A M +
Sbjct: 438 KCGNLRSGFALYEDMIKMGY-------PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 153 GVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA 212
+ + F+ LI + R EA+ F M YG+ PD + V+ + R EEA
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 213 QS-FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDS 271
FF K EPD + Y +LI +C+ K ++F M+ I ++ ++VI
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 610
Query: 272 LCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
L +C +I A F +I+ P+ VT+N+++ + R ++ ++F +K +
Sbjct: 611 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 670
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA 391
T+ LI C++ +++ A+++ ++M +KG PN+ T+ + +K D+ G+ +++
Sbjct: 671 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 730
Query: 392 KMKE-----------------------------------LNCLPNTLTYNILMRMFAESK 416
+M+E LP+ + Y IL+R + +
Sbjct: 731 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 790
Query: 417 SIDMVLKLKKEMDENQVEPN 436
+ L + M N V+P+
Sbjct: 791 RLVEAALLYEHMLRNGVKPD 810
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 137/311 (44%), Gaps = 36/311 (11%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
++D +L FD A + M G++ TF+ ++R + G EA+ F RM G
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG 561
Query: 189 VAPDKVAVSIVVSSLCRK-----------------------------------RRAEEAQ 213
+ PD +A ++ + C+ R E+A
Sbjct: 562 LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 621
Query: 214 SFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSL 272
FF++ ++ + EPD++ Y ++I G+C +++ AE IF+ +K PN T +I+I L
Sbjct: 622 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681
Query: 273 CRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADT 332
C+ + A +F+ M + G PNAVT+ LM K+ E ++F +M+ +
Sbjct: 682 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 741
Query: 333 IGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAK 392
+ Y+ +I+ C+ ++EA + + + + P+ + + K+ + A +Y
Sbjct: 742 VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEH 801
Query: 393 MKELNCLPNTL 403
M P+ L
Sbjct: 802 MLRNGVKPDDL 812
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 148/303 (48%), Gaps = 4/303 (1%)
Query: 181 FNRMEDYGVAPDKVAV-SIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWC 238
F+++ G+ P V+ V+ +L K +A F V +R F ++ ++ G
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL- 262
Query: 239 RAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAV 298
+IE A + + D G PNV T+ +I+ C+ G++ RA D+F M G P+ +
Sbjct: 263 SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 299 TFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLM 358
+++L+ + KAG ++F+Q D + ++ I+ + + +L A V M
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 359 VKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSI 418
+ +G++PN T+ + + + + A MY ++ + P+ +TY+ L+ F + ++
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 419 DMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYEN 478
L ++M + P+V Y +L+ ++G +A + +M+ + S++ N+ V+ +
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ-SIRLNVVVFNS 501
Query: 479 VLE 481
+++
Sbjct: 502 LID 504
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 147/356 (41%), Gaps = 74/356 (20%)
Query: 218 SVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIF------------------------KD 252
S++DR + DV + L+ CR G +++A EIF D
Sbjct: 138 SIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSD 195
Query: 253 MKD-----------AGIKPN-VHTYSIVIDSLCRCGQITRAHD----------------- 283
D GI+P+ V + V+D+L G++T+A D
Sbjct: 196 RVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSC 255
Query: 284 -----------------VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF 326
+ + ++D G PN VTF +L+ K G ++ +F M++
Sbjct: 256 NKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 327 NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGA 386
D I Y+ LI+ + + L K+ + + KGV + F+S K D+ A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 387 HRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILM 446
+Y +M PN +TY IL++ + I + ++ + +EP++ TY LI
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 447 FCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
FC+ G+ + + L ++M+ + P++ +Y +++ L K G + KM+ +
Sbjct: 436 FCKCGNLRSGFALYEDMI-KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 184/359 (51%), Gaps = 7/359 (1%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV 194
K + D A + M G++ A T+ I Y+ A A A M + GV P+KV
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
+ +++ C+K + EA S + S+ D+ D YT L++G + K++ AEEIF++M
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRT 313
+ GI P+V +Y ++I+ + G + +A +F EM++ G PN + +N L+ ++G
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
Query: 314 EKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
EK ++ ++M + + Y +I+ +C+ +L EA ++ + M KG+ P+S + ++
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Query: 374 FGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMR-MFAESKSIDMVLKLKKEMD--- 429
+L+DV A ++ K+ C +T +N L+ +F K+ L + MD
Sbjct: 739 VDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSF 797
Query: 430 ENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQ 488
+ +PN TY I+I C++G+ A +L +M + +L P + Y ++L K G+
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM-QNANLMPTVITYTSLLNGYDKMGR 855
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 190/415 (45%), Gaps = 37/415 (8%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D K++ + A L+ M + GV + T+S+LI ++ A A + M
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIE 244
+G+ + + ++ E+A++ FD + P Y SLI G+CR +
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
+ E+ +MK I + +TY V+ +C G + A+++ EMI +GC PN V + +L+
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
+ ++ R ++V +MK A D YN LI + + ++EA L MV+ G+
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL--------------------- 403
PN+ T+ + + + A + +M+E LPN +
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 404 --------------TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCE 449
TY +LM ++ +D ++ +EM + P+V +Y +LI F +
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 450 KGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
G+ A + EMVEE L PN+ +Y +L ++G+++ +EL+++M +G
Sbjct: 640 LGNMQKASSIFDEMVEE-GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 169/375 (45%), Gaps = 3/375 (0%)
Query: 108 AFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRR 167
A F+ + P + + Y +++ + ++ + L+ MK R + I+ T+ +++
Sbjct: 368 ALFDGMIASGLIPQA-QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 168 YVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPD 226
+G A + M G P+ V + ++ + + R +A +K++ PD
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 227 VILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFA 286
+ Y SLI G +A +++ A +M + G+KPN TY I + A
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK 546
Query: 287 EMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDE 346
EM + G PN V L+ + K G+ + + M D Y L+ +++
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606
Query: 347 NLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYN 406
+++A ++ M KG+AP+ ++ + +KL ++ A ++ +M E PN + YN
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666
Query: 407 ILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEE 466
+L+ F S I+ +L EM + PN TY +I +C+ G A++L EM +
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM-KL 725
Query: 467 KSLKPNLQVYENVLE 481
K L P+ VY +++
Sbjct: 726 KGLVPDSFVYTTLVD 740
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 163/365 (44%), Gaps = 2/365 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L D M G+ A+ ++ LI Y R + M+ + VV
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 202 SLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
+C + A + + + P+V++YT+LI + + + A + K+MK+ GI P
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
++ Y+ +I L + ++ A EM++ G PNA T+ + + +++A +
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+M+ + + LI +C+ + EA MV +G+ ++ T+ + + K
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
V+ A ++ +M+ P+ +Y +L+ F++ ++ + EM E + PNV Y
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
+L+ FC G A +L+ EM K L PN Y +++ K+G L L ++M
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 501 ARGFV 505
+G V
Sbjct: 725 LKGLV 729
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 167/376 (44%), Gaps = 24/376 (6%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAG---LAAEAVHAFNRME 185
+LD + DL W + M R V +T+ +LI + RAG L + + F +
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL--FKTEK 249
Query: 186 DYGVAPDKV--AVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKI 243
++ A V A+ + S +C+ P Y LI G C+ ++
Sbjct: 250 EFRTATLNVDGALKLKESMICKG----------------LVPLKYTYDVLIDGLCKIKRL 293
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
E A+ + +M G+ + HTYS++ID L + A + EM+ G N ++
Sbjct: 294 EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC 353
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
+ V K G EK +F+ M Y LIE +CR++N+ + ++L M K+ +
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Query: 364 APNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLK 423
+ T+ ++ + D++GA+ + +M C PN + Y L++ F ++ ++
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 424 LKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELL 483
+ KEM E + P++ Y LI+ + + A + EMV E LKPN Y +
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV-ENGLKPNAFTYGAFISGY 532
Query: 484 RKAGQLKMHEELVEKM 499
+A + ++ V++M
Sbjct: 533 IEASEFASADKYVKEM 548
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 161/401 (40%), Gaps = 60/401 (14%)
Query: 89 RVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDS 148
+VIE C A R + + + Y +++ K D A +
Sbjct: 572 KVIEACSAYRSMVD--------------QGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR 208
M+ +G+ ++ VLI + + G +A F+ M + G+ P+ + ++++ CR
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 209 AEEAQSFFD--SVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYS 266
E+A+ D SVK P+ + Y ++I G+C++G + A +F +MK G+ P+ Y+
Sbjct: 678 IEKAKELLDEMSVKG-LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Query: 267 IVIDSLCRCGQITRAHDVFA----------------------------------EMIDAG 292
++D CR + RA +F ++D
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796
Query: 293 CN----PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL 348
+ PN VT+N ++ K G E ++F+QM+ N I Y L+ + +
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856
Query: 349 EEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGA----HRMYAK-MKELNCLPNTL 403
E V + + G+ P+ ++ I K A +M+AK + C +
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIS 916
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILI 444
T L+ FA+ +++ K+ + M Q P+ T LI
Sbjct: 917 TCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 13/243 (5%)
Query: 116 LKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAA 175
LK Y ++D +L + A + + K +G + F+ LI + G
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTE 783
Query: 176 EAVHAFNRMED-----YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVIL 229
NR+ D +G P+ V +I++ LC++ E A+ F +++ P VI
Sbjct: 784 LKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 230 YTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM- 288
YTSL++G+ + G+ +F + AGI+P+ YS++I++ + G T+A + +M
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Query: 289 ----IDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
+D GC + T +L+ K G E +V M R D+ LI C
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCI 962
Query: 345 DEN 347
N
Sbjct: 963 SSN 965
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 161/401 (40%), Gaps = 43/401 (10%)
Query: 131 DLAGKLRHFDLAWHLIDSMKTRGVEITAET-FSVLIRRYVRAGLAAEAVHAFNRMEDYGV 189
++AG L+ + L+ S +EI E SVL R R ++ + FN ++ V
Sbjct: 37 EIAGILKQENWRDTLVSS--NLSIEINPEVVLSVL--RSKRVDDPSKLLSFFNWVDSQKV 92
Query: 190 APDKV-AVSIVVSSLCRKRRAEEAQSFFDSVKDRFEP--------------------DVI 228
K+ + S + LC E+A S + + +R P D +
Sbjct: 93 TEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGV 152
Query: 229 LYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM 288
L+ L G+ G IE A +F + P + +++D+L R ++ DV+ M
Sbjct: 153 LFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212
Query: 289 IDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV-FNQMKRFNCAADTIGYNFLIECHCRDEN 347
++ + T++ L+ H +AG + V F K F A N
Sbjct: 213 VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTAT---------------LN 257
Query: 348 LEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNI 407
++ A+K+ M+ KG+ P T++ + + K+ + A + +M L + TY++
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 408 LMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEK 467
L+ + ++ D L EM + + Y I + ++G A L M+
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS- 376
Query: 468 SLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVSRP 508
L P Q Y +++E + ++ EL+ +M R V P
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP 417
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 200/438 (45%), Gaps = 5/438 (1%)
Query: 67 PDLALEFSRLSAAHPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPY 126
P A S I ++ R I + G H + F +L F + PS + +
Sbjct: 30 PRTAASLSLCGFCFWIRAFSSYRKILRNGL--HNLQFNDALDLFTRMVHSRPLPSIID-F 86
Query: 127 IEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMED 186
+L + K+ +D+ L + M+ G+ T ++++ + A +M
Sbjct: 87 TRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMK 146
Query: 187 YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIER 245
G PD V + +++ C R E+A + FD + F+P+V+ YT+LI C+ +
Sbjct: 147 LGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNH 206
Query: 246 AEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMR 305
A E+F M G +PNV TY+ ++ LC G+ A + +M+ PN +TF +L+
Sbjct: 207 AVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID 266
Query: 306 VHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
VK G+ + +++N M + + D Y LI C L+EA ++ LM + G P
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLK 425
N + ++ K V +++ +M + + NT+TY +L++ + D+ ++
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 426 KEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRK 485
+M + P++ TY +L+ C G A + E + ++ + N+ Y +++ + K
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF-EYMRKREMDINIVTYTIIIQGMCK 445
Query: 486 AGQLKMHEELVEKMVARG 503
G+++ +L + ++G
Sbjct: 446 LGKVEDAFDLFCSLFSKG 463
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 176/364 (48%), Gaps = 6/364 (1%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
+ M G E TF+ L+ Y +A+ F+++ G P+ V + ++ LC
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 205 RKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
+ R A F+ + + P+V+ Y +L+ G C G+ A + +DM I+PNV
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
T++ +ID+ + G++ A +++ MI P+ T+ SL+ G ++ Q+F M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFG--CIAKLH 381
+R C + + Y LI C+ + +E+ +K+ M +KGV N+ T+ + C+
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 382 DVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYR 441
DV A ++ +M P+ TYN+L+ + ++ L + + M + +++ N+ TY
Sbjct: 380 DV--AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 442 ILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVA 501
I+I C+ G +A+ L + K +KPN+ Y ++ + G + + L +KM
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFS-KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Query: 502 RGFV 505
GF+
Sbjct: 497 DGFL 500
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 165/337 (48%), Gaps = 2/337 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L D + G + T++ LIR + AV FN+M G P+ V + +V+
Sbjct: 172 AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVT 231
Query: 202 SLCR-KRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC R + A D +K R EP+VI +T+LI + + GK+ A+E++ M + P
Sbjct: 232 GLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP 291
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+V TY +I+ LC G + A +F M GC PN V + +L+ K+ R E +++F
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+M + A+TI Y LI+ +C + A +V N M + P+ T+N + +
Sbjct: 352 YEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN 411
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
V A ++ M++ N +TY I+++ + ++ L + ++PNV TY
Sbjct: 412 GKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITY 471
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYE 477
+I FC +G + A L K+M E+ L PN VY+
Sbjct: 472 TTMISGFCRRGLIHEADSLFKKMKEDGFL-PNESVYK 507
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 1/295 (0%)
Query: 215 FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
F V R P +I +T L+ + + + +F+ M+ GI P + T +IV+ +C
Sbjct: 71 FTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCL 130
Query: 275 CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIG 334
Q RA +M+ G P+ VTF SL+ + R E + +F+Q+ + +
Sbjct: 131 SSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVT 190
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMK 394
Y LI C C++ +L AV++ N M G PN T+N++ + ++ A + M
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMM 250
Query: 395 ELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWN 454
+ PN +T+ L+ F + + +L M + V P+V TY LI C G +
Sbjct: 251 KRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD 310
Query: 455 NAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVSRPL 509
A + M ++E PN +Y ++ K+ +++ ++ +M +G V+ +
Sbjct: 311 EA-RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 182/361 (50%), Gaps = 2/361 (0%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
LI +G++ A T++ +I YV+ + M+ GV +KV ++++
Sbjct: 246 LIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSV 305
Query: 205 RKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
+ + +A+ FD +++R E DV +YTSLI CR G ++RA +F ++ + G+ P+ +
Sbjct: 306 KNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSY 365
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
TY +ID +C+ G++ A + EM G N V FN+L+ + + G ++ +++ M
Sbjct: 366 TYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVM 425
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDV 383
++ AD N + C R + +EA + L M++ GV ++ ++ ++ K +V
Sbjct: 426 EQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNV 485
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL 443
A R++ +M PN +TYN+++ + + I KL+ M+ N ++P+ TY L
Sbjct: 486 EEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSL 545
Query: 444 ILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
I C + + A +L EM K L N Y ++ L KAG+ L ++M +G
Sbjct: 546 IHGECIADNVDEAMRLFSEM-GLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Query: 504 F 504
+
Sbjct: 605 Y 605
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 162/350 (46%), Gaps = 1/350 (0%)
Query: 115 SLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLA 174
S+K Y +++ K R F ++ MK GV T+++L+ V+ G
Sbjct: 251 SVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKM 310
Query: 175 AEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSL 233
++A F+ M + G+ D + ++S CRK + A FD + ++ P Y +L
Sbjct: 311 SDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGAL 370
Query: 234 IHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGC 293
I G C+ G++ AE + +M+ G+ ++ +ID CR G + A ++ M G
Sbjct: 371 IDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGF 430
Query: 294 NPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVK 353
+ T N++ + R ++ Q +M T+ Y LI+ +C++ N+EEA +
Sbjct: 431 QADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKR 490
Query: 354 VLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFA 413
+ M KGV PN+ T+N + K + A ++ A M+ P++ TY L+
Sbjct: 491 LFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGEC 550
Query: 414 ESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
+ ++D ++L EM ++ N TY ++I + G + A+ L EM
Sbjct: 551 IADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 132/262 (50%), Gaps = 1/262 (0%)
Query: 117 KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
K S Y ++D K+ A L++ M+++GV IT F+ LI Y R G+ E
Sbjct: 358 KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDE 417
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA-QSFFDSVKDRFEPDVILYTSLIH 235
A ++ ME G D + + S R +R +EA Q F ++ + + YT+LI
Sbjct: 418 ASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLID 477
Query: 236 GWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNP 295
+C+ G +E A+ +F +M G++PN TY+++I + C+ G+I A + A M G +P
Sbjct: 478 VYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDP 537
Query: 296 NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVL 355
++ T+ SL+ A ++ +++F++M +++ Y +I + +EA +
Sbjct: 538 DSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLY 597
Query: 356 NLMVKKGVAPNSSTFNSIFGCI 377
+ M +KG ++ + ++ G +
Sbjct: 598 DEMKRKGYTIDNKVYTALIGSM 619
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 149/323 (46%), Gaps = 5/323 (1%)
Query: 125 PYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRM 184
Y +++L+ K A L D M+ RG+E ++ LI R G A F+ +
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL 355
Query: 185 EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKI 243
+ G++P ++ +C+ A+ + ++ + +++ +LI G+CR G +
Sbjct: 356 TEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMV 415
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
+ A I+ M+ G + +V T + + R + A M++ G + V++ +L
Sbjct: 416 DEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNL 475
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
+ V+ K G E+ ++F +M + I YN +I +C+ ++EA K+ M G+
Sbjct: 476 IDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGM 535
Query: 364 APNSSTFNSIF--GCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMV 421
P+S T+ S+ CIA +V+ A R++++M N++TY +++ +++ D
Sbjct: 536 DPDSYTYTSLIHGECIA--DNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Query: 422 LKLKKEMDENQVEPNVNTYRILI 444
L EM + Y LI
Sbjct: 594 FGLYDEMKRKGYTIDNKVYTALI 616
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 166/342 (48%), Gaps = 2/342 (0%)
Query: 163 VLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR 222
++ R YV G+ E + F+ M G++ D+ + + + + ++RR + F + D
Sbjct: 159 LVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDS 218
Query: 223 -FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRA 281
+ V T ++ G CR G++E+++++ K+ GIKP +TY+ +I++ + +
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 282 HDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIEC 341
V M G N VT+ LM + VK G+ ++F++M+ +D Y LI
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338
Query: 342 HCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPN 401
+CR N++ A + + + +KG++P+S T+ ++ + K+ ++ A + +M+
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT 398
Query: 402 TLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMK 461
+ +N L+ + +D + M++ + +V T + F ++ A + +
Sbjct: 399 QVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLF 458
Query: 462 EMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
M+ E +K + Y N++++ K G ++ + L +M ++G
Sbjct: 459 RMM-EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG 499
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 172/390 (44%), Gaps = 37/390 (9%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV 194
K RHF LA L + M + G+ ++ +IR + A ME G + V
Sbjct: 204 KFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIV 263
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRA------------- 240
++++ LC+K++ EA + + +PDV+ Y +L++G C+
Sbjct: 264 PYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEM 323
Query: 241 ----------------------GKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
GKIE A + K + D G+ PN+ Y+ +IDSLC+ +
Sbjct: 324 LCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKF 383
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
A +F M G PN VT++ L+ + + G+ + L +M YN L
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNC 398
I HC+ ++ A + M+ K + P T+ S+ G +N A R+Y +M
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 399 LPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYK 458
P+ T+ L+ + I +KL EM E V+PN TY ++I +CE+G + A++
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563
Query: 459 LMKEMVEEKSLKPNLQVYENVLELLRKAGQ 488
+KEM EK + P+ Y ++ L GQ
Sbjct: 564 FLKEMT-EKGIVPDTYSYRPLIHGLCLTGQ 592
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 155/315 (49%), Gaps = 2/315 (0%)
Query: 190 APDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEE 248
+P + AVS +V L ++ + EEA + V D P++ +Y +LI C+ K AE
Sbjct: 329 SPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAEL 388
Query: 249 IFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHV 308
+F M G++PN TYSI+ID CR G++ A EM+D G + +NSL+ H
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Query: 309 KAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSS 368
K G +M + Y L+ +C + +A+++ + M KG+AP+
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 369 TFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEM 428
TF ++ + + + A +++ +M E N PN +TYN+++ + E + + KEM
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 429 DENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQ 488
E + P+ +YR LI C G + A K+ + + + + + N Y +L + G+
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 489 LKMHEELVEKMVARG 503
L+ + ++MV RG
Sbjct: 628 LEEALSVCQEMVQRG 642
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 184/414 (44%), Gaps = 13/414 (3%)
Query: 95 GAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGV 154
G I + Y + A S+ F + + L AG +R A L + M V
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTT----LLSGLFRAGLIRD---AVKLFNEMAEWNV 538
Query: 155 EITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQS 214
+ T++V+I Y G ++A M + G+ PD + ++ LC +A EA+
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 215 FFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLC 273
F D + K E + I YT L+HG+CR GK+E A + ++M G+ ++ Y ++ID
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 274 RCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTI 333
+ + EM D G P+ V + S++ K G ++ +++ M C + +
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLH-DVNGAHRMY-A 391
Y +I C+ + EA + + M PN T+ + K D+ A ++ A
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNA 778
Query: 392 KMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
+K L L NT TYN+L+R F I+ +L M + V P+ TY +I C +
Sbjct: 779 ILKGL--LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836
Query: 452 HWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
A +L M E K ++P+ Y ++ AG++ EL +M+ +G +
Sbjct: 837 DVKKAIELWNSMTE-KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 187/472 (39%), Gaps = 84/472 (17%)
Query: 110 FNWATSLKNFPSSPEPYI--EMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRR 167
N + +F SP ++ ++D K R F A L D M G+ T+S+LI
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 168 YVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPD 226
+ R G A+ M D G+ + +++ C+ A+ F + + + EP
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 227 VILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFA 286
V+ YTSL+ G+C GKI +A ++ +M GI P+++T++ ++ L R G I A +F
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 287 EMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMK---------------------- 324
EM + PN VT+N ++ + + G K + +M
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 325 -------------RFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV-------- 363
+ NC + I Y L+ CR+ LEEA+ V MV++GV
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 364 ---------------------------APNSSTFNSIFGCIAKLHDVNGAHRMYAKMKEL 396
P+ + S+ +K D A ++ M
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 397 NCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNA 456
C+PN +TY ++ ++ ++ L +M PN TY + + KG +
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL-TKGEVD-- 768
Query: 457 YKLMKEMVE-----EKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
M++ VE K L N Y ++ + G+++ EL+ +M+ G
Sbjct: 769 ---MQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDG 817
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 163/346 (47%), Gaps = 3/346 (0%)
Query: 161 FSVLIRRYVRAGLAAEAVHAFNRM-EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DS 218
F +LI+ YVR+ + V F M + P+ +S ++ L + R A F D
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 219 VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
V PDV +YT +I C + RA+E+ M+ G N+ Y+++ID LC+ ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
A + ++ P+ VT+ +L+ K E L++ ++M + + L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNC 398
+E + +EEA+ ++ +V GV+PN +N++ + K + A ++ +M ++
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 399 LPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYK 458
PN +TY+IL+ MF +D L EM + ++ +V Y LI C+ G + A
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 459 LMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
M EM+ +K L+P + Y +++ G++ L +M +G
Sbjct: 459 FMAEMINKK-LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 8/274 (2%)
Query: 134 GKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDK 193
GKL A + M RGV++ + VLI ++ M D G+ PD
Sbjct: 626 GKLEE---ALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDD 682
Query: 194 VAVSIVVSSLCRKRRAEEAQSFFD-SVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKD 252
V + ++ + + +EA +D + + P+ + YT++I+G C+AG + AE +
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Query: 253 MKDAGIKPNVHTYSIVIDSLCRCGQITRAHDV-FAEMIDAGCNPNAVTFNSLMRVHVKAG 311
M+ PN TY +D L + G++ V I G N T+N L+R + G
Sbjct: 743 MQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQG 801
Query: 312 RTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFN 371
R E+ ++ +M + D I Y +I CR ++++A+++ N M +KG+ P+ +N
Sbjct: 802 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
Query: 372 S-IFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
+ I GC ++ A + +M +PN T
Sbjct: 862 TLIHGCCVA-GEMGKATELRNEMLRQGLIPNNKT 894
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 189/374 (50%), Gaps = 10/374 (2%)
Query: 103 FYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAE-TF 161
+ ++L FFNW F + E + ++D+ GK F+++W LI+ M + TF
Sbjct: 61 WQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTF 120
Query: 162 SVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF---DS 218
++ +RYV A L EA+ A+++++D+ + D+ + +V +LC + EA+ +
Sbjct: 121 RIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEELCFGKNV 179
Query: 219 VKDRFE-PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQ 277
+ + F + ++ ++ GW + G + +E +K M G+ ++ +YSI +D +C+ G+
Sbjct: 180 IGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGK 239
Query: 278 ITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNF 337
+A ++ EM + V +N+++R + E ++VF +M+ C + +N
Sbjct: 240 PWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNT 299
Query: 338 LIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELN 397
+I+ C D + +A ++L+ M K+G P+S T+ +F + K ++ ++ +M
Sbjct: 300 IIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILS---LFGRMIRSG 356
Query: 398 CLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAY 457
P TY +LMR F + VL + K M E+ P+ Y +I +KG + A
Sbjct: 357 VRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAR 416
Query: 458 KLMKEMVEEKSLKP 471
+ +EM+ E+ L P
Sbjct: 417 EYEEEMI-ERGLSP 429
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 202/419 (48%), Gaps = 20/419 (4%)
Query: 106 SLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLI-DSMKTRGVEITAETFSVL 164
SL FFNWA + S E + +L K R F A ++ D + GV++ A+ F L
Sbjct: 98 SLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDAL 157
Query: 165 IRRYVRAGLAAE-----------------AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKR 207
+ Y A F +M+DYG P + + +SSL +
Sbjct: 158 LYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQG 217
Query: 208 RAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYS 266
R + A F+ ++ + P+ ++ G+CR+GK+++ E+ +DM+ G + +Y+
Sbjct: 218 RVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYN 277
Query: 267 IVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF 326
+I C G ++ A + M +G PN VTFN+L+ +A + ++ +VF +MK
Sbjct: 278 TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV 337
Query: 327 NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGA 386
N A +T+ YN LI + + + E A + MV G+ + T+N++ + K A
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 387 HRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILM 446
+ ++ + N +PN+ T++ L+ K+ D +L K M + PN T+ +L+
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA 457
Query: 447 FCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
FC ++ A ++++EMV +S+ + + V L+ G+ ++ ++L+++M + F+
Sbjct: 458 FCRNEDFDGASQVLREMV-RRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 202/419 (48%), Gaps = 20/419 (4%)
Query: 106 SLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLI-DSMKTRGVEITAETFSVL 164
SL FFNWA + S E + +L K R F A ++ D + GV++ A+ F L
Sbjct: 98 SLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDAL 157
Query: 165 IRRYVRAGLAAE-----------------AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKR 207
+ Y A F +M+DYG P + + +SSL +
Sbjct: 158 LYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQG 217
Query: 208 RAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYS 266
R + A F+ ++ + P+ ++ G+CR+GK+++ E+ +DM+ G + +Y+
Sbjct: 218 RVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYN 277
Query: 267 IVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF 326
+I C G ++ A + M +G PN VTFN+L+ +A + ++ +VF +MK
Sbjct: 278 TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV 337
Query: 327 NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGA 386
N A +T+ YN LI + + + E A + MV G+ + T+N++ + K A
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 387 HRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILM 446
+ ++ + N +PN+ T++ L+ K+ D +L K M + PN T+ +L+
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA 457
Query: 447 FCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
FC ++ A ++++EMV +S+ + + V L+ G+ ++ ++L+++M + F+
Sbjct: 458 FCRNEDFDGASQVLREMV-RRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 186/380 (48%), Gaps = 8/380 (2%)
Query: 133 AGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPD 192
AG +R L+D+MK+ ++ T++ LI GL+ EA +ME+ GV +
Sbjct: 323 AGSMRE---GLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKAN 379
Query: 193 KVAVSIVVSSLCRKRRAEEAQSFFDSVKDR--FEPDVILYTSLIHGWCRAGKIERAEEIF 250
+V +I + LC++ + E + D F PD++ Y +LI + + G + A E+
Sbjct: 380 QVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMM 439
Query: 251 KDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKA 310
++M GIK N T + ++D+LC+ ++ AH++ G + VT+ +L+ +
Sbjct: 440 REMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFRE 499
Query: 311 GRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
+ EK L+++++MK+ +N LI C E A++ + + + G+ P+ STF
Sbjct: 500 EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTF 559
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE 430
NSI K V A Y + + + P+ T NIL+ + + L + E
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE 619
Query: 431 NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK 490
+ E + TY +I FC+ AY L+ EM EEK L+P+ Y + + LL + G+L
Sbjct: 620 ER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEM-EEKGLEPDRFTYNSFISLLMEDGKLS 677
Query: 491 MHEELVEKMVAR-GFVSRPL 509
+EL++K + G + R L
Sbjct: 678 ETDELLKKFSGKFGSMKRDL 697
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 179/367 (48%), Gaps = 4/367 (1%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRM-EDYGVAPDKVAVSIVV 200
A + D M GV + +TF+VL+ Y G +A+ RM ++ V PD V + ++
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 201 SSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIK 259
++ +K R + + D K+ P+ + Y +L++G+C+ G ++ A +I + MK +
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 260 PNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV 319
P++ TY+I+I+ LC G + ++ M P+ VT+N+L+ + G + + ++
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 320 FNQMKRFNCAADTIGYNFLIECHCRDENLEEAV-KVLNLMVKKGVAPNSSTFNSIFGCIA 378
QM+ A+ + +N ++ C++E E KV L+ G +P+ T++++
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427
Query: 379 KLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVN 438
K+ D++GA M +M + NT+T N ++ + + +D L + +
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 487
Query: 439 TYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEK 498
TY LI+ F + A ++ EM + K + P + + +++ L G+ ++ E ++
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVK-ITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 499 MVARGFV 505
+ G +
Sbjct: 547 LAESGLL 553
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 127/259 (49%), Gaps = 6/259 (2%)
Query: 225 PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR---CGQITRA 281
P L+ + + GK A +IF+ M +KPN+ T + ++ L R I+ A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 282 HDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM-KRFNCAADTIGYNFLIE 340
+VF +M+ G + N TFN L+ + G+ E L + +M F D + YN +++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 341 CHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLP 400
+ L + ++L M K G+ PN T+N++ KL + A ++ MK+ N LP
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 401 NTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLM 460
+ TYNIL+ + S+ L+L M +++P+V TY LI E G A KLM
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 461 KEMVEEKSLKPNLQVYENV 479
++M E +K N QV N+
Sbjct: 369 EQM-ENDGVKAN-QVTHNI 385
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 109/228 (47%), Gaps = 2/228 (0%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
+LD K R D A +L++S RG + T+ LI + R +A+ ++ M+
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK 516
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAE 247
+ P + ++ LC + E A FD + + PD + S+I G+C+ G++E+A
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
E + + KP+ +T +I+++ LC+ G +A + F +I+ + VT+N+++
Sbjct: 577 EFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAF 635
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVL 355
K + ++ + ++M+ D YN I D L E ++L
Sbjct: 636 CKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 206/438 (47%), Gaps = 40/438 (9%)
Query: 106 SLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLI 165
+ +FF W+ K + + E Y+ ++D+ + D + +K +T + LI
Sbjct: 135 AWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALI 194
Query: 166 RRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFE 224
+ + + G+ E + + +M++ G+ P + +++ L + A+ F+ ++ R +
Sbjct: 195 KSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIK 254
Query: 225 PDVILYTSLIHGWCRAGKIERAEE-----------------------------------I 249
PD++ Y ++I G+C+AG+ ++A E +
Sbjct: 255 PDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVAL 314
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVK 309
+++M + GI+ H +S+VI LC+ G++ + VF MI G PN + L+ + K
Sbjct: 315 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAK 374
Query: 310 AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSST 369
+G E +++ ++M D + Y+ ++ C++ +EEA+ + G+A NS
Sbjct: 375 SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF 434
Query: 370 FNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMD 429
++S+ + K V+ A R++ +M E C ++ YN L+ F + + +D + L K M+
Sbjct: 435 YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME 494
Query: 430 ENQ-VEPNVNTYRILIL-MFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
E + + V TY IL+ MF K H N + +M+ +K + P + + L +G
Sbjct: 495 EEEGCDQTVYTYTILLSGMF--KEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSG 552
Query: 488 QLKMHEELVEKMVARGFV 505
++ ++++++ G +
Sbjct: 553 KVARACKILDELAPMGVI 570
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 139/345 (40%), Gaps = 38/345 (11%)
Query: 196 VSIVVSSLCRKRRAEEAQSFF--DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
VS V+ S + + + A SFF + ++ ++ Y SL+ A ++R + ++
Sbjct: 119 VSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEI 178
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRT 313
K V + +I S + G + V+ +M + G P T+N LM V A
Sbjct: 179 KKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFV 238
Query: 314 EKVLQVFNQMKRFNCAADTIGYNFLIECHCR----------------------------- 344
+ +VF M+ D + YN +I+ +C+
Sbjct: 239 DSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 298
Query: 345 ------DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNC 398
D + V + M +KG+ F+ + G + K +N + ++ M
Sbjct: 299 IQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS 358
Query: 399 LPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYK 458
PN Y +L+ +A+S S++ ++L M + +P+V TY +++ C+ G A
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
Query: 459 LMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
L N Y ++++ L KAG++ E L E+M +G
Sbjct: 419 YF-HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKG 462
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 201/384 (52%), Gaps = 12/384 (3%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
M+ L + R D+ + + M R ++ TF+V+I + G +A M+ YG
Sbjct: 195 MIALLKENRSADVEY-VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 189 VAPDKVAVSIVVSSLCR---KRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIE 244
+P+ V+ + ++ C+ + +A + + V++ P++ + LI G+ + +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
+ ++FK+M D +KPNV +Y+ +I+ LC G+I+ A + +M+ AG PN +T+N+L+
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
K ++ L +F +K T YN LI+ +C+ +++ + M ++G+
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMF---AESKSIDMV 421
P+ T+N + + + ++ A +++ ++ LP+ +T++ILM + ES+ M+
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS-KGLPDLVTFHILMEGYCRKGESRKAAML 492
Query: 422 LKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
L KEM + ++P TY I++ +C++G+ A + +M +E+ L+ N+ Y +L+
Sbjct: 493 L---KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ 549
Query: 482 LLRKAGQLKMHEELVEKMVARGFV 505
+ G+L+ L+ +M+ +G V
Sbjct: 550 GYSQKGKLEDANMLLNEMLEKGLV 573
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 167/337 (49%), Gaps = 6/337 (1%)
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIH 235
AF R YG ++ ++ +L ++ R+ + + + + ++ + +P+V + +I+
Sbjct: 172 GFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVIN 231
Query: 236 GWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCG---QITRAHDVFAEMIDAG 292
C+ GK+ +A ++ +DMK G PNV +Y+ +ID C+ G ++ +A V EM++
Sbjct: 232 ALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEND 291
Query: 293 CNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAV 352
+PN TFN L+ K ++VF +M + + I YN LI C + EA+
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351
Query: 353 KVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMF 412
+ + MV GV PN T+N++ K + A M+ +K +P T YN+L+ +
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411
Query: 413 AESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPN 472
+ ID LK+EM+ + P+V TY LI C G+ A KL ++ K L P+
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT-SKGL-PD 469
Query: 473 LQVYENVLELLRKAGQLKMHEELVEKMVARGFVSRPL 509
L + ++E + G+ + L+++M G R L
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHL 506
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 142/286 (49%), Gaps = 3/286 (1%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS- 218
TF++LI + + ++ F M D V P+ ++ + +++ LC + EA S D
Sbjct: 298 TFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKM 357
Query: 219 VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
V +P++I Y +LI+G+C+ ++ A ++F +K G P Y+++ID+ C+ G+I
Sbjct: 358 VSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKI 417
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
+ EM G P+ T+N L+ + G E ++F+Q+ D + ++ L
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS-KGLPDLVTFHIL 476
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM-KELN 397
+E +CR +A +L M K G+ P T+N + K ++ A M +M KE
Sbjct: 477 MEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERR 536
Query: 398 CLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL 443
N +YN+L++ +++ ++ L EM E + PN TY I+
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 134/277 (48%), Gaps = 32/277 (11%)
Query: 118 NFPSSPEPYIEMLDL------------------AGKLRHFDLAWHLIDSMKTRGVEITAE 159
N P S + + EMLD GK+ A + D M + GV+
Sbjct: 311 NLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISE---AISMRDKMVSAGVQPNLI 367
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV 219
T++ LI + + + EA+ F ++ G P ++++ + C+ + ++ + + +
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 220 -KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
++ PDV Y LI G CR G IE A+++F + G+ P++ T+ I+++ CR G+
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGES 486
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMK-----RFNCAADTI 333
+A + EM G P +T+N +M+ + K G + + QM+ R N A+
Sbjct: 487 RKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVAS--- 543
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
YN L++ + + LE+A +LN M++KG+ PN T+
Sbjct: 544 -YNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 165/379 (43%), Gaps = 30/379 (7%)
Query: 153 GVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSI-----VVSSLCRKR 207
GV +T + L R+ + + L + R + V ++VS+ ++ SL +
Sbjct: 59 GVHVTDINPNELFRQLISSELDPDLCL---RYYSWLVKNSDISVSLELTFKLLHSLANAK 115
Query: 208 RAEEAQSFFD------------------SVKDRFEPDVILYTSLIHGWCRAGKIERAEEI 249
R + +SF D S+ D + I+ L+ + + E E
Sbjct: 116 RYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEA 175
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVK 309
FK G K + + ++ +L + + V+ EMI PN TFN ++ K
Sbjct: 176 FKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCK 235
Query: 310 AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR---DENLEEAVKVLNLMVKKGVAPN 366
G+ K V MK + C+ + + YN LI+ +C+ + + +A VL MV+ V+PN
Sbjct: 236 TGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPN 295
Query: 367 SSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKK 426
+TFN + K ++ G+ +++ +M + + PN ++YN L+ I + ++
Sbjct: 296 LTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRD 355
Query: 427 EMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKA 486
+M V+PN+ TY LI FC+ A + V+ + P ++Y +++ K
Sbjct: 356 KMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS-VKGQGAVPTTRMYNMLIDAYCKL 414
Query: 487 GQLKMHEELVEKMVARGFV 505
G++ L E+M G V
Sbjct: 415 GKIDDGFALKEEMEREGIV 433
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 86/206 (41%), Gaps = 36/206 (17%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A + S+K +G T +++LI Y + G + ME G+ PD + +++
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
Query: 202 SLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPN 261
LCR E A+ FD + + PD++ + L+ G+CR G+ +A + K+M G+KP
Sbjct: 445 GLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 262 VHTYSIVIDSLCRCGQITRAHD------------------------------------VF 285
TY+IV+ C+ G + A + +
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564
Query: 286 AEMIDAGCNPNAVTFNSLMRVHVKAG 311
EM++ G PN +T+ + V G
Sbjct: 565 NEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 132 LAGKLRHFDL--AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGV 189
+AG R+ ++ A L D + ++G+ TF +L+ Y R G + +A M G+
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGLPDLV-TFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 190 APDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD--RFEPDVILYTSLIHGWCRAGKIERAE 247
P + +IV+ C++ + A + ++ R +V Y L+ G+ + GK+E A
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCG 276
+ +M + G+ PN TY IV + + G
Sbjct: 562 MLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 188/406 (46%), Gaps = 3/406 (0%)
Query: 99 HGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITA 158
H I F + A F + PS + + +L LR ++ + M+ G+
Sbjct: 48 HSIRFEDAFALFFEMVHSQPLPSIVD-FTRLLTATANLRRYETVIYFSQKMELYGISHDL 106
Query: 159 ETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSF-FD 217
+F++LI + R + A+ +M G P V ++ C R +A S
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166
Query: 218 SVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQ 277
VK +EP+V++Y +LI G C+ G++ A E+ +M+ G+ +V TY+ ++ LC G+
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 278 ITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNF 337
+ A + +M+ NP+ VTF +L+ V VK G ++ +++ +M + + + + YN
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 338 LIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELN 397
+I C L +A K +LM KG PN T+N++ K V+ +++ +M
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 398 CLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAY 457
+ TYN L+ + + + + L + M +V P++ T+ IL+ C G +A
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 458 KLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+M E + + Y ++ L KA +++ EL ++ G
Sbjct: 407 VKFDDMRESEKY-IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 159/326 (48%), Gaps = 1/326 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A+ L+ M G E ++ LI + G A+ N ME G+ D V + +++
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 202 SLCRKRR-AEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC R ++ A+ D +K PDV+ +T+LI + + G ++ A+E++K+M + + P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
N TY+ +I+ LC G++ A F M GC PN VT+N+L+ K ++ +++F
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+M AD YN LI +C+ L A+ + MV + V P+ T + +
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
++ A + M+E + YNI++ ++ ++ +L + V+P+ TY
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEE 466
I+IL C+ G A +L++ M EE
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEE 485
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 1/239 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
+ ++D+ K + D A L M V+ T++ +I G +A F+ M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIE 244
G P+ V + ++S C+ R +E F + + F D+ Y +LIHG+C+ GK+
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A +IF M + P++ T+ I++ LC G+I A F +M ++ V +N ++
Sbjct: 369 VALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMI 428
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
KA + EK ++F ++ D Y +I C++ EA +++ M ++G+
Sbjct: 429 HGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 183/418 (43%), Gaps = 37/418 (8%)
Query: 94 CGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRG 153
C +R +L FF WA + P Y ML++ K + + ++ MK RG
Sbjct: 178 CAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRG 237
Query: 154 VEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQ 213
+ T E FS ++ Y RAG +A+ M+ GV P+ + + + R R E+A
Sbjct: 238 IYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKAL 297
Query: 214 SFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSL 272
F + ++ P+V+ Y +I G+C ++E A E+ +DM G P+ +Y ++ L
Sbjct: 298 RFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYL 357
Query: 273 CRCGQITRAHDVFAEMI-DAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
C+ +I D+ +M + G P+ VT+N+L+ + K ++ L + D
Sbjct: 358 CKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRID 417
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA 391
+GY+ ++ C++ + EA ++N M+ KG P
Sbjct: 418 KLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP-------------------------- 451
Query: 392 KMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
P+ +TY ++ F +D KL + M + +PN +Y L+ C G
Sbjct: 452 --------PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTG 503
Query: 452 HWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVSRPL 509
A ++M M EE PN Y ++ LR+ G+L ++V +MV +GF P+
Sbjct: 504 KSLEAREMMN-MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPV 560
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 171/343 (49%), Gaps = 5/343 (1%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV 219
T++ LI + A EA+ ++ G DK+ S +V +LC++ R EA+ + +
Sbjct: 385 TYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM 444
Query: 220 --KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQ 277
K PDV+ YT++++G+CR G++++A+++ + M G KPN +Y+ +++ +CR G+
Sbjct: 445 LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK 504
Query: 278 ITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNF 337
A ++ + +PN++T++ +M + G+ + V +M + N
Sbjct: 505 SLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINL 564
Query: 338 LIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELN 397
L++ CRD EA K + + KG A N F ++ + +++ A + M +N
Sbjct: 565 LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLIN 624
Query: 398 CLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAY 457
+ TY L+ + I +L K+M ++P TYR +I +C+ G ++
Sbjct: 625 KHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLV 684
Query: 458 KLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
++++M+ + + +Y V+E L G+L+ + L+ K++
Sbjct: 685 AILEKMISRQKCRT---IYNQVIEKLCVLGKLEEADTLLGKVL 724
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 163/417 (39%), Gaps = 70/417 (16%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++ + K H D A + + +G I +S ++ + G +EA N M
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445
Query: 186 DYG-VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKI 243
G PD V + VV+ CR ++A+ + +P+ + YT+L++G CR GK
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS 505
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
A E+ ++ PN TYS+++ L R G+++ A DV EM+ G P V N L
Sbjct: 506 LEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLL 565
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
++ + GRT + + + CA + + + +I C+++ L+ A+ VL+ M
Sbjct: 566 LQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINK 625
Query: 364 APNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYN----------------- 406
+ T+ ++ + K + A + KM P +TY
Sbjct: 626 HADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVA 685
Query: 407 ILMRMFAESKS-----------------------IDMVLKLKKEMD--------ENQVEP 435
IL +M + K + VL+ D E ++
Sbjct: 686 ILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKK 745
Query: 436 NV--NTYRILILMF----------CEK--------GHWNNAYKLMKEMVEEKSLKPN 472
V + Y++ MF CEK G + A KLM +VE + P
Sbjct: 746 GVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQ 802
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 183/376 (48%), Gaps = 4/376 (1%)
Query: 132 LAGKLRHFDL--AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGV 189
+ G ++ DL A L D M+ G + TFSVLI + + G +A+ + +ME G+
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 190 APDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEI 249
P V ++ + ++ EEA FD + +V + +++ C+ GK + A E+
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATEL 465
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVK 309
M+ GI PNV +Y+ V+ CR + A VF+ +++ G PN T++ L+ +
Sbjct: 466 LSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFR 525
Query: 310 AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVL-NLMVKKGVAPNSS 368
+ L+V N M N + + Y +I C+ +A ++L N++ +K + +
Sbjct: 526 NHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCM 585
Query: 369 TFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEM 428
++NSI K +++ A Y +M PN +TY LM ++ +D L+++ EM
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 429 DENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQ 488
V+ ++ Y LI FC++ + +A L E++EE L P+ +Y +++ R G
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE-GLNPSQPIYNSLISGFRNLGN 704
Query: 489 LKMHEELVEKMVARGF 504
+ +L +KM+ G
Sbjct: 705 MVAALDLYKKMLKDGL 720
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 155/345 (44%), Gaps = 37/345 (10%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
++ DLA + ++ +G++ T+S+LI R A+ N M + + V
Sbjct: 492 KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVY 551
Query: 197 SIVVSSLCRKRRAEEAQSF----------------FDSVKDRF----------------- 223
+++ LC+ + +A+ ++S+ D F
Sbjct: 552 QTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC 611
Query: 224 ----EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQIT 279
P+VI YTSL++G C+ ++++A E+ +MK+ G+K ++ Y +ID C+ +
Sbjct: 612 GNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNME 671
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
A +F+E+++ G NP+ +NSL+ G L ++ +M + D Y LI
Sbjct: 672 SASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLI 731
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
+ +D NL A ++ M G+ P+ + I ++K +M+ +MK+ N
Sbjct: 732 DGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVT 791
Query: 400 PNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILI 444
PN L YN ++ ++D +L EM + + P+ T+ IL+
Sbjct: 792 PNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 180/401 (44%), Gaps = 30/401 (7%)
Query: 106 SLAFFNWATSLKN--------------FPSSPEPYIEMLDLAGKLRHFD----------L 141
+L F+NWA + SSPE Y DL +R+ L
Sbjct: 89 ALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLL--IRYVSTSNPTPMASVL 146
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
L+DS K+ G E+ + F+ L+ Y + AV N+M + V P V+ +S
Sbjct: 147 VSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLS 206
Query: 202 SLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
+L ++ EA+ + V + D + L+ R K A E+ + G +P
Sbjct: 207 ALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEP 266
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAG-CNPNAVTFNSLMRVHVKAGRTEKVLQV 319
+ YS+ + + C+ + A+ + EM + C P+ T+ S++ VK G + +++
Sbjct: 267 DSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRL 326
Query: 320 FNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAK 379
++M + + + LI HC++ +L A+ + + M K+G +PNS TF+ + K
Sbjct: 327 KDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRK 386
Query: 380 LHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNT 439
++ A Y KM+ L P+ + +++ + + + + LKL E E + NV
Sbjct: 387 NGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFV 445
Query: 440 YRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVL 480
++ C++G + A +L+ +M E + + PN+ Y NV+
Sbjct: 446 CNTILSWLCKQGKTDEATELLSKM-ESRGIGPNVVSYNNVM 485
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 85/189 (44%)
Query: 316 VLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFG 375
V ++ + K F ++ +N+L+ + +D + AV ++N M++ V P N
Sbjct: 147 VSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLS 206
Query: 376 CIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEP 435
+ + + + A +Y++M + + +T +LMR + L++ E EP
Sbjct: 207 ALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEP 266
Query: 436 NVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEEL 495
+ Y + + C+ A L++EM E+K P+ + Y +V+ K G + L
Sbjct: 267 DSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRL 326
Query: 496 VEKMVARGF 504
++M++ G
Sbjct: 327 KDEMLSDGI 335
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 167/335 (49%), Gaps = 2/335 (0%)
Query: 154 VEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQ 213
+E+ + + +I + ++G ++A+ + G++ + ++S+L R EA+
Sbjct: 265 LELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAE 324
Query: 214 SFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSL 272
+ F+ ++ +P Y +L+ G+ + G ++ AE + +M+ G+ P+ HTYS++ID+
Sbjct: 325 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 384
Query: 273 CRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADT 332
G+ A V EM PN+ F+ L+ G +K QV +MK D
Sbjct: 385 VNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDR 444
Query: 333 IGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAK 392
YN +I+ + L+ A+ + M+ +G+ P+ T+N++ C K A M+
Sbjct: 445 QFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEA 504
Query: 393 MKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGH 452
M+ CLP TYNI++ + + + D + +L +M + PNV T+ L+ ++ + G
Sbjct: 505 MERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR 564
Query: 453 WNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
+N+A + ++EM + LKP+ +Y ++ + G
Sbjct: 565 FNDAIECLEEM-KSVGLKPSSTMYNALINAYAQRG 598
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 175/360 (48%), Gaps = 2/360 (0%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
L + ++ G++ ++ L++ YV+ G +A + ME GV+PD+ S+++ +
Sbjct: 326 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYV 385
Query: 205 RKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
R E A+ ++ +P+ +++ L+ G+ G+ ++ ++ K+MK G+KP+
Sbjct: 386 NAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ 445
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
Y++VID+ + + A F M+ G P+ VT+N+L+ H K GR ++F M
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDV 383
+R C YN +I + E ++ ++L M +G+ PN T ++ K
Sbjct: 506 ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRF 565
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL 443
N A +MK + P++ YN L+ +A+ + + + M + ++P++ L
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSL 625
Query: 444 ILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
I F E A+ +++ M +E +KP++ Y +++ L + + + + E+M+ G
Sbjct: 626 INAFGEDRRDAEAFAVLQYM-KENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 164/387 (42%), Gaps = 39/387 (10%)
Query: 156 ITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA--- 212
+T T++ LI R +A++ +M G D V S+V+ SL R + +
Sbjct: 195 LTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLL 254
Query: 213 QSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSL 272
+ + + +D+ E DV L +I G+ ++G +A ++ + G+ T +I +L
Sbjct: 255 RLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISAL 314
Query: 273 CRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADT 332
G+ A +F E+ +G P +N+L++ +VK G + + ++M++ + D
Sbjct: 315 ADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDE 374
Query: 333 IGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAK 392
Y+ LI+ + E A VL M V PNS F+ + + ++ +
Sbjct: 375 HTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Query: 393 MKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPN---------------- 436
MK + P+ YN+++ F + +D + M +EP+
Sbjct: 435 MKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
Query: 437 -------------------VNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYE 477
TY I+I + ++ W++ +L+ +M + + + PN+ +
Sbjct: 495 HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKM-KSQGILPNVVTHT 553
Query: 478 NVLELLRKAGQLKMHEELVEKMVARGF 504
++++ K+G+ E +E+M + G
Sbjct: 554 TLVDVYGKSGRFNDAIECLEEMKSVGL 580
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 130/293 (44%), Gaps = 1/293 (0%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
++ M+ V+ + FS L+ + G + M+ GV PD+ ++V+ +
Sbjct: 396 VLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 455
Query: 205 RKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
+ + A + FD + + EPD + + +LI C+ G+ AEE+F+ M+ G P
Sbjct: 456 KFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCAT 515
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
TY+I+I+S + + +M G PN VT +L+ V+ K+GR ++ +M
Sbjct: 516 TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 575
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDV 383
K + YN LI + + E+AV +M G+ P+ NS+ +
Sbjct: 576 KSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRD 635
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPN 436
A + MKE P+ +TY LM+ V + +EM + +P+
Sbjct: 636 AEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 1/242 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D GK D A D M + G+E T++ LI + + G A F ME
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIE 244
G P +I+++S + R ++ + +K + P+V+ +T+L+ + ++G+
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A E ++MK G+KP+ Y+ +I++ + G +A + F M G P+ + NSL+
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 626
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
+ R + V MK D + Y L++ R + ++ V M+ G
Sbjct: 627 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 686
Query: 365 PN 366
P+
Sbjct: 687 PD 688
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 86/154 (55%), Gaps = 1/154 (0%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
++D+ GK F+ A ++ MK+ G++ ++ ++ LI Y + GL+ +AV+AF M G
Sbjct: 555 LVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDG 614
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAE 247
+ P +A++ ++++ RR EA + +K+ +PDV+ YT+L+ R K ++
Sbjct: 615 LKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVP 674
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRA 281
++++M +G KP+ S++ +L Q RA
Sbjct: 675 VVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 186/395 (47%), Gaps = 16/395 (4%)
Query: 83 SPSTARRVIEKCG-----------AIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLD 131
SP +R+++KCG R+ + + SS Y E+LD
Sbjct: 92 SPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILD 151
Query: 132 LAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAP 191
+ GK+R F+ + D M R + +T+ VL+ RY A EAV F R +++G+
Sbjct: 152 VLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDD 211
Query: 192 DKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFK 251
D VA ++ LCR + E A++ F S + F D+ +++GWC G + A+ +K
Sbjct: 212 DLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWK 271
Query: 252 DMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAG 311
D+ + +P+V +Y +I++L + G++ +A +++ M D NP+ N+++
Sbjct: 272 DIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKK 331
Query: 312 RTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKG--VAPNSST 369
R + L+VF ++ + + YN L++ C+ E+ +++ M KG +PN T
Sbjct: 332 RIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVT 391
Query: 370 FNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMD 429
F+ + + DV+ AK K C + YN++ R++ + + V ++ EM+
Sbjct: 392 FSYLLKYSQRSKDVDIVLERMAKNK---CEMTSDLYNLMFRLYVQWDKEEKVREIWSEME 448
Query: 430 ENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
+ + P+ TY I I KG A +EM+
Sbjct: 449 RSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMM 483
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 115/256 (44%), Gaps = 7/256 (2%)
Query: 258 IKPNVHT-----YSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGR 312
+K +VH Y+ ++D L + + H VF EM N T+ L+ + A +
Sbjct: 134 VKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHK 193
Query: 313 TEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNS 372
++ + VF + K F D + ++ L+ CR +++E A + L ++ + N
Sbjct: 194 VDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFA-ETLFCSRRREFGCDIKAMNM 252
Query: 373 IFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQ 432
I L +V+ A R + + C P+ ++Y ++ + + ++L + M + +
Sbjct: 253 ILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTR 312
Query: 433 VEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMH 492
P+V +I C K A ++ +E + EK PN+ Y ++L+ L K + +
Sbjct: 313 RNPDVKICNNVIDALCFKKRIPEALEVFRE-ISEKGPDPNVVTYNSLLKHLCKIRRTEKV 371
Query: 493 EELVEKMVARGFVSRP 508
ELVE+M +G P
Sbjct: 372 WELVEEMELKGGSCSP 387
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 175/354 (49%), Gaps = 4/354 (1%)
Query: 155 EITAETFSVLIRRYVRAGLAAEAVHAFNRME-DYGVAPDKVAVSIVVSSLCRKRRAEEAQ 213
+++ F+++ + + G ++ F M+ P++ +I++S L R+ ++
Sbjct: 102 KLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCL 161
Query: 214 SFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSL 272
FD + + V YT+LI+ + R G+ E + E+ MK+ I P++ TY+ VI++
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221
Query: 273 CRCG-QITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
R G +FAEM G P+ VT+N+L+ G ++ VF M D
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA 391
Y+ L+E + LE+ +L M G P+ +++N + AK + A ++
Sbjct: 282 LTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 392 KMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
+M+ C PN TY++L+ +F +S D V +L EM + +P+ TY ILI +F E G
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGG 401
Query: 452 HWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
++ L +MVEE +++P+++ YE ++ K G + ++++ M A V
Sbjct: 402 YFKEVVTLFHDMVEE-NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIV 454
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 169/339 (49%), Gaps = 12/339 (3%)
Query: 161 FSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK 220
++++I R GL + + F+ M GV+ + + ++++ R R E + D +K
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 221 -DRFEPDVILYTSLIHGWCRAG-KIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
++ P ++ Y ++I+ R G E +F +M+ GI+P++ TY+ ++ + G
Sbjct: 204 NEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLG 263
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
A VF M D G P+ T++ L+ K R EKV + +M D YN L
Sbjct: 264 DEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVL 323
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFN---SIFGCIAKLHDVNGAHRMYAKMKE 395
+E + + +++EA+ V + M G PN++T++ ++FG + DV +++ +MK
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDV---RQLFLEMKS 380
Query: 396 LNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNN 455
N P+ TYNIL+ +F E V+ L +M E +EP++ TY +I + G +
Sbjct: 381 SNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHED 440
Query: 456 AYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEE 494
A K+++ M + P+ + Y V+E GQ ++EE
Sbjct: 441 ARKILQYMT-ANDIVPSSKAYTGVIEAF---GQAALYEE 475
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 183/379 (48%), Gaps = 10/379 (2%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHA-FNRM 184
Y +++ G+ ++ + L+D MK + + T++ +I R GL E + F M
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 185 EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKI 243
G+ PD V + ++S+ + +EA+ F ++ D PD+ Y+ L+ + + ++
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
E+ ++ +M G P++ +Y++++++ + G I A VF +M AGC PNA T++ L
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
+ + ++GR + V Q+F +MK N D YN LIE +E V + + MV++ +
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 364 APNSSTFNS-IFGCI-AKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMV 421
P+ T+ IF C LH+ A ++ M + +P++ Y ++ F ++ +
Sbjct: 419 EPDMETYEGIIFACGKGGLHE--DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA 476
Query: 422 LKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
L M E P++ T+ L+ F G + ++ +V + + N + +E
Sbjct: 477 LVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV-DSGIPRNRDTFNAQIE 535
Query: 482 LLRKAGQLKMHEELVEKMV 500
++ G+ EE V+ V
Sbjct: 536 AYKQGGKF---EEAVKTYV 551
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/419 (20%), Positives = 180/419 (42%), Gaps = 44/419 (10%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y +++ GKLR + L+ M + G +++VL+ Y ++G EA+ F++M+
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIE 244
G P+ S++++ + R ++ + F +K +PD Y LI + G +
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCG---------QITRAHDV----------- 284
+F DM + I+P++ TY +I + + G Q A+D+
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464
Query: 285 ---------------FAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCA 329
F M + G NP+ TF+SL+ + G ++ + +++
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIP 524
Query: 330 ADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRM 389
+ +N IE + + EEAVK M K P+ T ++ + V+
Sbjct: 525 RNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQ 584
Query: 390 YAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILM--- 446
+ +MK + LP+ + Y +++ ++ +++ D V +L +EM N+V N ++++ M
Sbjct: 585 FEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVS---NIHQVIGQMIKG 641
Query: 447 -FCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+ + +W ++ ++ E ++ Y +L+ L GQ + ++ + RG
Sbjct: 642 DYDDDSNWQIVEYVLDKLNSE-GCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGL 699
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 113/248 (45%), Gaps = 3/248 (1%)
Query: 120 PSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVH 179
PSS + Y +++ G+ ++ A ++M G + ETF L+ + R GL E+
Sbjct: 455 PSS-KAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEA 513
Query: 180 AFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA-QSFFDSVKDRFEPDVILYTSLIHGWC 238
+R+ D G+ ++ + + + + + EEA +++ D K R +PD +++ +
Sbjct: 514 ILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYS 573
Query: 239 RAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAV 298
A ++ E F++MK + I P++ Y +++ + + +++ EM+ +
Sbjct: 574 FARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQ 633
Query: 299 TFNSLMRVHVKAGRTEKVLQ-VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNL 357
+++ ++++ V +++ C YN L++ E A +VLN
Sbjct: 634 VIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNE 693
Query: 358 MVKKGVAP 365
K+G+ P
Sbjct: 694 ATKRGLFP 701
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/248 (18%), Positives = 104/248 (41%), Gaps = 34/248 (13%)
Query: 117 KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
+N E Y ++ GK + A ++ M + +++ ++ +I + +A L E
Sbjct: 416 ENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEE 475
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHG 236
A+ AFN M + G P + + SL++
Sbjct: 476 ALVAFNTMHEVGS----------------------------------NPSIETFHSLLYS 501
Query: 237 WCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPN 296
+ R G ++ +E I + D+GI N T++ I++ + G+ A + +M + C+P+
Sbjct: 502 FARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPD 561
Query: 297 AVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLN 356
T +++ V+ A ++ + F +MK + + Y ++ + + E ++ ++L
Sbjct: 562 ERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLE 621
Query: 357 LMVKKGVA 364
M+ V+
Sbjct: 622 EMLSNRVS 629
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 152/349 (43%), Gaps = 35/349 (10%)
Query: 103 FYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFS 162
+ +L FF W F Y M+ G+ + F L+D M G + T++
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN 403
Query: 163 VLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR 222
LI Y RA EA++ FN+M++ G PD+
Sbjct: 404 RLIHSYGRANYLNEAMNVFNQMQEAGCKPDR----------------------------- 434
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
+ Y +LI +AG ++ A ++++ M+ G+ P+ TYS++I+ L + G + AH
Sbjct: 435 -----VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAH 489
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
+F EM+D GC PN VT+N +M +H KA + L+++ M+ D + Y+ ++E
Sbjct: 490 KLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVL 549
Query: 343 CRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
LEEA V M +K P+ + + K +V A + Y M PN
Sbjct: 550 GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNV 609
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
T N L+ F I +L + M + P++ TY L+L C G
Sbjct: 610 PTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTDG 657
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 144/278 (51%), Gaps = 17/278 (6%)
Query: 245 RAEEIFKDMKD--------------AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMID 290
+A ++ K M D G K + HTY+ ++ +L R Q + + EM+
Sbjct: 333 QANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR 392
Query: 291 AGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEE 350
GC PN VT+N L+ + +A + + VFNQM+ C D + Y LI+ H + L+
Sbjct: 393 DGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDI 452
Query: 351 AVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMR 410
A+ + M G++P++ T++ I C+ K + AH+++ +M + C PN +TYNI+M
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 411 MFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLK 470
+ A++++ LKL ++M EP+ TY I++ + G+ A + EM ++K+
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM-QQKNWI 571
Query: 471 PNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVSRP 508
P+ VY +++L KAG ++ + + M+ G RP
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL--RP 607
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 161/351 (45%), Gaps = 31/351 (8%)
Query: 159 ETFSVLIRRYVRAGLAAE--------------AVHAFNRMEDYGVA-------------- 190
E S ++RR+ R G AAE A +M DYG A
Sbjct: 303 ENVSSVLRRF-RWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFK 361
Query: 191 PDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEI 249
D + +V +L R ++ D V+D +P+ + Y LIH + RA + A +
Sbjct: 362 HDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNV 421
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVK 309
F M++AG KP+ TY +ID + G + A D++ M G +P+ T++ ++ K
Sbjct: 422 FNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 310 AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSST 369
AG ++F +M C + + YN +++ H + N + A+K+ M G P+ T
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 370 FNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMD 429
++ + + + A ++ +M++ N +P+ Y +L+ ++ ++ +++ + + M
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 430 ENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVL 480
+ PNV T L+ F AY+L++ M+ L+P+LQ Y +L
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML-ALGLRPSLQTYTLLL 651
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 187/399 (46%), Gaps = 6/399 (1%)
Query: 109 FFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTR--GVEITAETFSVLIR 166
F S F + + Y +L + R FD L+ ++ ++ F L+R
Sbjct: 69 FLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLR 128
Query: 167 RYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRF--E 224
Y AG ++ F R+ D+GV +++ +++ L + +R + + F + K+ F
Sbjct: 129 NYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGIT 188
Query: 225 PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDV 284
P++ L+ C+ IE A ++ ++ G+ PN+ TY+ ++ G + A V
Sbjct: 189 PNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRV 248
Query: 285 FAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
EM+D G P+A T+ LM + K GR + V + M++ + + Y +I C+
Sbjct: 249 LEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCK 308
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
++ EA + + M+++ P+SS + + + H V+ A ++ KM + NC+P+
Sbjct: 309 EKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNAL 368
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
+ L+ + + KL E ++ + P++ TY LI CEKG A +L +M
Sbjct: 369 LSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMY 427
Query: 465 EEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
E K KPN Y ++E L K G +K ++E+M+ G
Sbjct: 428 ERKC-KPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIG 465
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 149/285 (52%), Gaps = 5/285 (1%)
Query: 132 LAGKLRHFDL--AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGV 189
L G + D+ A +++ M RG A T++VL+ Y + G +EA + ME +
Sbjct: 233 LGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEI 292
Query: 190 APDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEE 248
P++V +++ +LC+++++ EA++ FD + +R F PD L +I C K++ A
Sbjct: 293 EPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACG 352
Query: 249 IFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHV 308
+++ M P+ S +I LC+ G++T A +F E + G P+ +T+N+L+
Sbjct: 353 LWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMC 411
Query: 309 KAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSS 368
+ G + ++++ M C + YN LIE ++ N++E V+VL M++ G PN +
Sbjct: 412 EKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKT 471
Query: 369 TFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFA 413
TF +F + KL A ++ + M +N + ++ + ++ FA
Sbjct: 472 TFLILFEGLQKLGKEEDAMKIVS-MAVMNGKVDKESWELFLKKFA 515
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 171/369 (46%), Gaps = 46/369 (12%)
Query: 136 LRHFDLAWHLIDSMKTR------GVEITAETFSVLIRRYVRAGLAAEAVHAF--NRMEDY 187
LR++ LA SM+ GV+ + + + L+ ++ + VHA N E +
Sbjct: 127 LRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQ-NQRFDLVHAMFKNSKESF 185
Query: 188 GVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERA 246
G+ P+ +++V +LC+K E A D + P+++ YT+++ G+ G +E A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 247 EEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRV 306
+ + ++M D G P+ TY++++D C+ G+ + A V +M PN VT+ ++R
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 307 HVKAGRTEKVLQVFNQM--KRF---------------------------------NCAAD 331
K ++ + +F++M + F NC D
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA 391
+ LI C++ + EA K+ + +KG P+ T+N++ + + ++ A R++
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLFD-EFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWD 424
Query: 392 KMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
M E C PN TYN+L+ +++ ++ +++ +EM E PN T+ IL + G
Sbjct: 425 DMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLG 484
Query: 452 HWNNAYKLM 460
+A K++
Sbjct: 485 KEEDAMKIV 493
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 152/342 (44%), Gaps = 34/342 (9%)
Query: 103 FYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFS 162
+ +L FF W F Y M+ G+ + F L+D M G + T++
Sbjct: 339 YANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYN 398
Query: 163 VLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR 222
LI Y RA EA++ FN+M++ G
Sbjct: 399 RLIHSYGRANYLKEAMNVFNQMQEAGC--------------------------------- 425
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
EPD + Y +LI +AG ++ A ++++ M++AG+ P+ TYS++I+ L + G + AH
Sbjct: 426 -EPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAH 484
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
+F EM+ GC PN VTFN ++ +H KA E L+++ M+ D + Y+ ++E
Sbjct: 485 RLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVL 544
Query: 343 CRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
LEEA V M +K P+ + + K +V+ A + Y M + PN
Sbjct: 545 GHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNV 604
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILI 444
T N L+ F + L + M + P++ TY +L+
Sbjct: 605 PTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 137/255 (53%), Gaps = 3/255 (1%)
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRT 313
+ G K + HTY+ ++ +L R Q + + EM+ GC PN VT+N L+ + +A
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 314 EKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
++ + VFNQM+ C D + Y LI+ H + L+ A+ + M + G++P++ T++ I
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 374 FGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQV 433
C+ K + AHR++ +M C PN +T+NI++ + A++++ + LKL ++M
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 434 EPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHE 493
+P+ TY I++ + G A + EM + K+ P+ VY +++L KAG +
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEM-QRKNWVPDEPVYGLLVDLWGKAGNVDKAW 589
Query: 494 ELVEKMVARGFVSRP 508
+ + M+ G RP
Sbjct: 590 QWYQAMLQAGL--RP 602
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 164/356 (46%), Gaps = 29/356 (8%)
Query: 159 ETFSVLIRRYVRAGLAAEAVHAFN-RMEDY--------------------------GVAP 191
E S ++RR+ A EA+H F RM+ Y G
Sbjct: 298 ENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKH 357
Query: 192 DKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIF 250
D + +V +L R ++ E D V+D +P+ + Y LIH + RA ++ A +F
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 251 KDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKA 310
M++AG +P+ TY +ID + G + A D++ M +AG +P+ T++ ++ KA
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 311 GRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
G ++F +M C + + +N +I H + N E A+K+ M G P+ T+
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE 430
+ + + + A ++A+M+ N +P+ Y +L+ ++ ++ ++D + + M +
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 431 NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKA 486
+ PNV T L+ F + AY L++ M+ L P+LQ Y +L A
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSML-ALGLHPSLQTYTLLLSCCTDA 652
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 154/305 (50%), Gaps = 5/305 (1%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV 219
TF+ L+ G +A+ +RM + G P +++ LC+ E A + +
Sbjct: 12 TFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKM 67
Query: 220 KD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
++ + V++Y ++I C+ G A+ +F +M D GI P+V TYS +IDS CR G+
Sbjct: 68 EETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRW 127
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
T A + +MI+ NP+ VTF++L+ VK G+ + +++ M R TI YN +
Sbjct: 128 TDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSM 187
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNC 398
I+ C+ + L +A ++L+ M K +P+ TF+++ K V+ ++ +M
Sbjct: 188 IDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 247
Query: 399 LPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYK 458
+ NT+TY L+ F + +D L M + V PN T++ ++ C K A+
Sbjct: 248 VANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFA 307
Query: 459 LMKEM 463
+++++
Sbjct: 308 ILEDL 312
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 136/252 (53%), Gaps = 1/252 (0%)
Query: 124 EPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNR 183
+PY +++ K+ + A +L+ M+ ++ ++ +I R + G A + F
Sbjct: 42 QPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTE 101
Query: 184 MEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGK 242
M D G+ PD + S ++ S CR R +A+ D ++ + PDV+ +++LI+ + GK
Sbjct: 102 MHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGK 161
Query: 243 IERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNS 302
+ AEEI+ DM GI P TY+ +ID C+ ++ A + M C+P+ VTF++
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 303 LMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKG 362
L+ + KA R + +++F +M R A+T+ Y LI C+ +L+ A +LN+M+ G
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Query: 363 VAPNSSTFNSIF 374
VAPN TF S+
Sbjct: 282 VAPNYITFQSML 293
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 160/317 (50%), Gaps = 6/317 (1%)
Query: 184 MEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGK 242
M + G PD V + +++ LC + R +A + D V++ +P Y ++I+G C+ G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 243 IERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNS 302
E A + M++ IK +V Y+ +ID LC+ G A ++F EM D G P+ +T++
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 303 LMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKG 362
++ ++GR Q+ M D + ++ LI ++ + EA ++ M+++G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 363 VAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVL 422
+ P + T+NS+ K +N A RM M +C P+ +T++ L+ + ++K +D +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 423 KLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLEL 482
++ EM + N TY LI FC+ G + A L+ M+ + PN ++++L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI-SSGVAPNYITFQSMLAS 295
Query: 483 LRKAGQLKMHEELVEKM 499
L +L+ ++E +
Sbjct: 296 LCSKKELRKAFAILEDL 312
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 150/292 (51%), Gaps = 5/292 (1%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+D M VE + + +I + G A++ ++ME+ + V + ++
Sbjct: 29 ALALVDRM----VEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIID 84
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC+ AQ+ F + D+ PDVI Y+ +I +CR+G+ AE++ +DM + I P
Sbjct: 85 RLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINP 144
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+V T+S +I++L + G+++ A +++ +M+ G P +T+NS++ K R ++
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML 204
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ M +C+ D + ++ LI +C+ + ++ +++ M ++G+ N+ T+ ++ ++
Sbjct: 205 DSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 264
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQ 432
D++ A + M PN +T+ ++ K + + +++ +++
Sbjct: 265 GDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 40/217 (18%)
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDEN 347
M++ GC P+ VTF +LM GR VLQ
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGR---VLQ----------------------------- 28
Query: 348 LEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNI 407
A+ +++ MV++G P + +I + K+ D A + +KM+E + + + YN
Sbjct: 29 ---ALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNA 81
Query: 408 LMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEK 467
++ + L EM + + P+V TY +I FC G W +A +L+++M+E +
Sbjct: 82 IIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIE-R 140
Query: 468 SLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+ P++ + ++ L K G++ EE+ M+ RG
Sbjct: 141 QINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 182/379 (48%), Gaps = 3/379 (0%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
+L++A +L + A ++ D M RGV + ++ +++ R G EA M G
Sbjct: 188 VLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRG 247
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAE 247
PD ++++++LC A +F + D F+P++I +TSLI G C+ G I++A
Sbjct: 248 FIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAF 307
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGC-NPNAVTFNSLMRV 306
E+ ++M G KPNV+T++ +ID LC+ G +A +F +++ + PN T+ S++
Sbjct: 308 EMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGG 367
Query: 307 HVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPN 366
+ K + + +F++MK + Y LI HC+ + A +++NLM +G PN
Sbjct: 368 YCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPN 427
Query: 367 SSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKK 426
T+N+ + K A+ + K + +TY IL++ + I+ L
Sbjct: 428 IYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFC 487
Query: 427 EMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKA 486
M++ E ++ ILI FC + + +L ++V L P + Y +++ K
Sbjct: 488 RMNKTGFEADMRLNNILIAAFCRQKKMKESERLF-QLVVSLGLIPTKETYTSMISCYCKE 546
Query: 487 GQLKMHEELVEKMVARGFV 505
G + + + M G V
Sbjct: 547 GDIDLALKYFHNMKRHGCV 565
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 173/369 (46%), Gaps = 9/369 (2%)
Query: 95 GAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGV 154
G + I +++ + + +L NF S I+ L G ++ A+ +++ M G
Sbjct: 266 GLVNRAIWYFRKMIDLGFKPNLINFTS----LIDGLCKKGSIKQ---AFEMLEEMVRNGW 318
Query: 155 EITAETFSVLIRRYVRAGLAAEAVHAFNRM-EDYGVAPDKVAVSIVVSSLCRKRRAEEAQ 213
+ T + LI + G +A F ++ P+ + ++ C++ + A+
Sbjct: 319 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAE 378
Query: 214 SFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSL 272
F +K++ P+V YT+LI+G C+AG RA E+ M D G PN++TY+ IDSL
Sbjct: 379 MLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSL 438
Query: 273 CRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADT 332
C+ + A+++ + G + VT+ L++ K + L F +M + AD
Sbjct: 439 CKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADM 498
Query: 333 IGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAK 392
N LI CR + ++E+ ++ L+V G+ P T+ S+ C K D++ A + +
Sbjct: 499 RLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHN 558
Query: 393 MKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGH 452
MK C+P++ TY L+ + +D KL + M + + P T L +C++
Sbjct: 559 MKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRND 618
Query: 453 WNNAYKLMK 461
NA L++
Sbjct: 619 SANAMILLE 627
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 152/315 (48%), Gaps = 7/315 (2%)
Query: 161 FSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV- 219
F+ LI + G +A M G P+ + ++ LC++ E+A F +
Sbjct: 290 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 349
Query: 220 -KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
D ++P+V YTS+I G+C+ K+ RAE +F MK+ G+ PNV+TY+ +I+ C+ G
Sbjct: 350 RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF 409
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCA--ADTIGYN 336
RA+++ M D G PN T+N+ + K R + ++ N K F+C AD + Y
Sbjct: 410 GRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN--KAFSCGLEADGVTYT 467
Query: 337 FLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKEL 396
LI+ C+ ++ +A+ M K G + N + + + + R++ + L
Sbjct: 468 ILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL 527
Query: 397 NCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNA 456
+P TY ++ + + ID+ LK M + P+ TY LI C+K + A
Sbjct: 528 GLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEA 587
Query: 457 YKLMKEMVEEKSLKP 471
KL + M+ ++ L P
Sbjct: 588 CKLYEAMI-DRGLSP 601
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 156/345 (45%), Gaps = 18/345 (5%)
Query: 162 SVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK- 220
S++ Y+R + H N D + A++ VV+SL + + A FF
Sbjct: 61 SLVCTSYLRQNHVVSSPHRVNLDFDANSLTHEQAIT-VVASLASESGSMVALCFFYWAVG 119
Query: 221 -DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQIT 279
++F + LY G +++A E+ + M + +S + G++
Sbjct: 120 FEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCM--------LRNFSEI-------GRLN 164
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
A + +M + G P+++T N ++ + V+ G E VF++M D+ Y ++
Sbjct: 165 EAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMV 224
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
RD ++EA + L M+++G P+++T I + + VN A + KM +L
Sbjct: 225 IGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFK 284
Query: 400 PNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKL 459
PN + + L+ + SI ++ +EM N +PNV T+ LI C++G A++L
Sbjct: 285 PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL 344
Query: 460 MKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
++V + KPN+ Y +++ K +L E L +M +G
Sbjct: 345 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 389
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 153/349 (43%), Gaps = 35/349 (10%)
Query: 103 FYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFS 162
+ +L FF W F Y M+ G+ + F L+D M G + T++
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN 403
Query: 163 VLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR 222
LI Y RA EA++ FN+M++ G C+
Sbjct: 404 RLIHSYGRANYLNEAMNVFNQMQEAG---------------CK----------------- 431
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
PD + Y +LI +AG ++ A ++++ M+ G+ P+ TYS++I+ L + G + AH
Sbjct: 432 --PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAH 489
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
+F EM+D GC PN VT+N +M +H KA + L+++ M+ D + Y+ ++E
Sbjct: 490 KLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVL 549
Query: 343 CRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
LEEA V M +K P+ + + K +V A + Y M PN
Sbjct: 550 GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNV 609
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
T N L+ F I +L + M + P++ TY L+L C G
Sbjct: 610 PTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTDG 657
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 144/278 (51%), Gaps = 17/278 (6%)
Query: 245 RAEEIFKDMKD--------------AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMID 290
+A ++ K M D G K + HTY+ ++ +L R Q + + EM+
Sbjct: 333 QANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR 392
Query: 291 AGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEE 350
GC PN VT+N L+ + +A + + VFNQM+ C D + Y LI+ H + L+
Sbjct: 393 DGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDI 452
Query: 351 AVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMR 410
A+ + M G++P++ T++ I C+ K + AH+++ +M + C PN +TYNI+M
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 411 MFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLK 470
+ A++++ LKL ++M EP+ TY I++ + G+ A + EM ++K+
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM-QQKNWI 571
Query: 471 PNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVSRP 508
P+ VY +++L KAG ++ + + M+ G RP
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL--RP 607
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 161/351 (45%), Gaps = 31/351 (8%)
Query: 159 ETFSVLIRRYVRAGLAAE--------------AVHAFNRMEDYGVA-------------- 190
E S ++RR+ R G AAE A +M DYG A
Sbjct: 303 ENVSSVLRRF-RWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFK 361
Query: 191 PDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEI 249
D + +V +L R ++ D V+D +P+ + Y LIH + RA + A +
Sbjct: 362 HDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNV 421
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVK 309
F M++AG KP+ TY +ID + G + A D++ M G +P+ T++ ++ K
Sbjct: 422 FNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 310 AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSST 369
AG ++F +M C + + YN +++ H + N + A+K+ M G P+ T
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 370 FNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMD 429
++ + + + A ++ +M++ N +P+ Y +L+ ++ ++ +++ + + M
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 430 ENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVL 480
+ PNV T L+ F AY+L++ M+ L+P+LQ Y +L
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML-ALGLRPSLQTYTLLL 651
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 153/349 (43%), Gaps = 35/349 (10%)
Query: 103 FYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFS 162
+ +L FF W F Y M+ G+ + F L+D M G + T++
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN 403
Query: 163 VLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR 222
LI Y RA EA++ FN+M++ G C+
Sbjct: 404 RLIHSYGRANYLNEAMNVFNQMQEAG---------------CK----------------- 431
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
PD + Y +LI +AG ++ A ++++ M+ G+ P+ TYS++I+ L + G + AH
Sbjct: 432 --PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAH 489
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
+F EM+D GC PN VT+N +M +H KA + L+++ M+ D + Y+ ++E
Sbjct: 490 KLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVL 549
Query: 343 CRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
LEEA V M +K P+ + + K +V A + Y M PN
Sbjct: 550 GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNV 609
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
T N L+ F I +L + M + P++ TY L+L C G
Sbjct: 610 PTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTDG 657
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 144/278 (51%), Gaps = 17/278 (6%)
Query: 245 RAEEIFKDMKD--------------AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMID 290
+A ++ K M D G K + HTY+ ++ +L R Q + + EM+
Sbjct: 333 QANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR 392
Query: 291 AGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEE 350
GC PN VT+N L+ + +A + + VFNQM+ C D + Y LI+ H + L+
Sbjct: 393 DGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDI 452
Query: 351 AVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMR 410
A+ + M G++P++ T++ I C+ K + AH+++ +M + C PN +TYNI+M
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 411 MFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLK 470
+ A++++ LKL ++M EP+ TY I++ + G+ A + EM ++K+
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM-QQKNWI 571
Query: 471 PNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVSRP 508
P+ VY +++L KAG ++ + + M+ G RP
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL--RP 607
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 161/351 (45%), Gaps = 31/351 (8%)
Query: 159 ETFSVLIRRYVRAGLAAE--------------AVHAFNRMEDYGVA-------------- 190
E S ++RR+ R G AAE A +M DYG A
Sbjct: 303 ENVSSVLRRF-RWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFK 361
Query: 191 PDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEI 249
D + +V +L R ++ D V+D +P+ + Y LIH + RA + A +
Sbjct: 362 HDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNV 421
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVK 309
F M++AG KP+ TY +ID + G + A D++ M G +P+ T++ ++ K
Sbjct: 422 FNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 310 AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSST 369
AG ++F +M C + + YN +++ H + N + A+K+ M G P+ T
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 370 FNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMD 429
++ + + + A ++ +M++ N +P+ Y +L+ ++ ++ +++ + + M
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 430 ENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVL 480
+ PNV T L+ F AY+L++ M+ L+P+LQ Y +L
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML-ALGLRPSLQTYTLLL 651
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 177/379 (46%), Gaps = 37/379 (9%)
Query: 161 FSVLIRRYVRAGLAAEAVHAFNRMEDYG-------------------------------- 188
+ +LIR Y+R G+ +++ F M YG
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225
Query: 189 ---VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIE 244
+ PD +I+++ LC + E++ + K + P ++ Y +++H +C+ G+ +
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A E+ MK G+ +V TY+++I LCR +I + + + +M +PN VT+N+L+
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
G+ Q+ N+M F + + + +N LI+ H + N +EA+K+ +M KG+
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
P+ ++ + + K + + A Y +MK +TY ++ ++ +D + L
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 465
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
EM ++ ++P++ TY LI FC+ G + A +++ + L PN +Y ++
Sbjct: 466 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR-IYRVGLSPNGIIYSTLIYNCC 524
Query: 485 KAGQLKMHEELVEKMVARG 503
+ G LK + E M+ G
Sbjct: 525 RMGCLKEAIRIYEAMILEG 543
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 187/407 (45%), Gaps = 5/407 (1%)
Query: 95 GAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGV 154
G I G F ++L F + K S Y +LD K FDLA MK GV
Sbjct: 382 GHISEG-NFKEALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 439
Query: 155 EITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQS 214
+ T++ +I + G EAV N M G+ PD V S +++ C+ R + A+
Sbjct: 440 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 499
Query: 215 FFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLC 273
+ + P+ I+Y++LI+ CR G ++ A I++ M G + T+++++ SLC
Sbjct: 500 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 559
Query: 274 RCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTI 333
+ G++ A + M G PN V+F+ L+ + +G K VF++M +
Sbjct: 560 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 619
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM 393
Y L++ C+ +L EA K L + A ++ +N++ + K ++ A ++ +M
Sbjct: 620 TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 679
Query: 394 KELNCLPNTLTYNILMRMFA-ESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGH 452
+ + LP++ TY L+ + K++ +L K+ V PN Y + + G
Sbjct: 680 VQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 739
Query: 453 WNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
W A +E ++ P++ +++ + G+++ +L+ +M
Sbjct: 740 W-KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 785
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 164/364 (45%), Gaps = 2/364 (0%)
Query: 143 WHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSS 202
W + M R + TF++LI G ++ + +ME G AP V + V+
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 203 LCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPN 261
C+K R + A D +K + + DV Y LIH CR+ +I + + +DM+ I PN
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 262 VHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFN 321
TY+ +I+ G++ A + EM+ G +PN VTFN+L+ H+ G ++ L++F
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397
Query: 322 QMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLH 381
M+ + Y L++ C++ + A M + GV T+ + + K
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Query: 382 DVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYR 441
++ A + +M + P+ +TY+ L+ F + ++ + + PN Y
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Query: 442 ILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVA 501
LI C G A ++ + M+ E + + + ++ L KAG++ EE + M +
Sbjct: 518 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF-TFNVLVTSLCKAGKVAEAEEFMRCMTS 576
Query: 502 RGFV 505
G +
Sbjct: 577 DGIL 580
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 171/403 (42%), Gaps = 37/403 (9%)
Query: 139 FDLAWHLIDSMKTRGVEITAETFSVLIRRYVRA--------------------------- 171
F A L+D MK++GV+ T+++LI R+
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343
Query: 172 ---GLAAE-----AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR- 222
G + E A N M +G++P+ V + ++ + +EA F ++ +
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
P + Y L+ G C+ + + A + MK G+ TY+ +ID LC+ G + A
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
+ EM G +P+ VT+++L+ K GR + ++ ++ R + + I Y+ LI
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 523
Query: 343 CRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
CR L+EA+++ M+ +G + TFN + + K V A M LPNT
Sbjct: 524 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
++++ L+ + S + EM + P TY L+ C+ GH A K +K
Sbjct: 584 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643
Query: 463 MVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
+ + +Y +L + K+G L L +MV R +
Sbjct: 644 L-HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 132/279 (47%), Gaps = 10/279 (3%)
Query: 229 LYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM 288
+Y LI + R G I+ + EIF+ M G P+V+T + ++ S+ + G+ EM
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 289 IDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL 348
+ P+ TFN L+ V G EK + +M++ A + YN ++ +C+
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284
Query: 349 EEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNIL 408
+ A+++L+ M KGV + T+N + + + + + + + M++ PN +TYN L
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 344
Query: 409 MRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
+ F+ + + +L EM + PN T+ LI +G++ A K M M+E K
Sbjct: 345 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK-MFYMMEAKG 403
Query: 469 LKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVSR 507
L P+ Y +L+ L K + + ARGF R
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDL---------ARGFYMR 433
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/547 (19%), Positives = 217/547 (39%), Gaps = 115/547 (21%)
Query: 70 ALEFSRLSAAHPISPSTARR--VIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYI 127
A EF R + I P+T +I G G+ ++ + F+ T + + P+ Y
Sbjct: 567 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL---KAFSVFDEMTKVGHHPTFF-TYG 622
Query: 128 EMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDY 187
+L K H A + S+ + ++ L+ ++G A+AV F M
Sbjct: 623 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 682
Query: 188 GVAPDKVAVSIVVSSLCRKRR-------AEEAQS-------------------------- 214
+ PD + ++S LCRK + A+EA++
Sbjct: 683 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 742
Query: 215 --FFDSVKDRF--EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVID 270
+F D PD++ ++I G+ R GKIE+ ++ +M + PN+ TY+I++
Sbjct: 743 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 802
Query: 271 SLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV----------- 319
+ ++ + ++ +I G P+ +T +SL+ ++ E L++
Sbjct: 803 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 862
Query: 320 ----FNQMKRFNCAADTIGYNF--------------------LIECHCRDENLEEAVKVL 355
FN + CA I + F ++ R+ +E+ VL
Sbjct: 863 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 922
Query: 356 NLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAH----------------------RMYAK- 392
+ M K+G++P S + + + ++ D+ A R AK
Sbjct: 923 HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 982
Query: 393 ------------MKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
M ++ +P ++ LM + ++ ++ L+L+ M ++ ++ +Y
Sbjct: 983 GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1042
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE-LLRKAGQLKMHEELVEKM 499
+LI C KG A++L +EM + L N Y+ ++ LL + + +++ +
Sbjct: 1043 NVLITGLCAKGDMALAFELYEEMKGDGFL-ANATTYKALIRGLLARETAFSGADIILKDL 1101
Query: 500 VARGFVS 506
+ARGF++
Sbjct: 1102 LARGFIT 1108
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 104/245 (42%), Gaps = 1/245 (0%)
Query: 260 PNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV 319
N Y I+I R G I + ++F M G NP+ T N+++ VK+G V
Sbjct: 161 SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220
Query: 320 FNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAK 379
+M + D +N LI C + + E++ ++ M K G AP T+N++ K
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 380 LHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNT 439
A + MK + TYN+L+ S I L ++M + + PN T
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 440 YRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
Y LI F +G A +L+ EM+ L PN + +++ G K ++ M
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSF-GLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 500 VARGF 504
A+G
Sbjct: 400 EAKGL 404
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 93/212 (43%), Gaps = 1/212 (0%)
Query: 293 CNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAV 352
CN N ++ L+RV+++ G + L++F M + N ++ +
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 218
Query: 353 KVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMF 412
L M+K+ + P+ +TFN + + + + KM++ P +TYN ++ +
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 413 AESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPN 472
+ ++L M V+ +V TY +LI C Y L+++M ++ + PN
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM-RKRMIHPN 337
Query: 473 LQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
Y ++ G++ + +L+ +M++ G
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 369
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 182/371 (49%), Gaps = 2/371 (0%)
Query: 116 LKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAA 175
LK F + E + M++ K F + L+ +K RG+ ++ + +I R G
Sbjct: 268 LKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKV 327
Query: 176 EAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLI 234
+ + + PD +I+++ LC++ + E A F D K P+ + Y LI
Sbjct: 328 DPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLI 387
Query: 235 HGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCN 294
+C++ + + A ++ M + G KP++ TY I+I L G + A ++ ++ID G +
Sbjct: 388 QAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVS 447
Query: 295 PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKV 354
P+A +N LM K GR +F++M N D Y LI+ R + +EA KV
Sbjct: 448 PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
+L V+KGV + N++ + ++ A +M E + +P+ TY+ ++ + +
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567
Query: 415 SKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQ 474
+ + +K+ + M++N+ +PNV TY LI FC +G + A + KEM + + L PN+
Sbjct: 568 QQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEM-QLRDLVPNVV 626
Query: 475 VYENVLELLRK 485
Y ++ L K
Sbjct: 627 TYTTLIRSLAK 637
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 198/437 (45%), Gaps = 40/437 (9%)
Query: 106 SLAFFNWATSLKN--FPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSV 163
+ F+W +S K F S+ L L + R F+ ++ +++ V++T E S
Sbjct: 80 GVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSH 139
Query: 164 LIRRYVRAGLAAEAVHAFNRM-EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR 222
++ Y +G ++AV ++ + E Y PD +A + ++S L + RR +A+ +D + DR
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 223 FE------------------------------------PDVILYTSLIHGWCRAGKIERA 246
+ P+++ Y ++I G+C+ G IE A
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259
Query: 247 EEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRV 306
+FK++K G P + T+ +I+ C+ G + + +E+ + G + N+++
Sbjct: 260 YLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDA 319
Query: 307 HVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPN 366
+ G + + +C D YN LI C++ E AV L+ KKG+ PN
Sbjct: 320 KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPN 379
Query: 367 SSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKK 426
+ ++ + K + + A ++ +M E C P+ +TY IL+ S +D + +K
Sbjct: 380 NLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV 439
Query: 427 EMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKA 486
++ + V P+ Y +L+ C+ G + A L EM+ ++++ P+ VY +++ ++
Sbjct: 440 KLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEML-DRNILPDAYVYATLIDGFIRS 498
Query: 487 GQLKMHEELVEKMVARG 503
G ++ V +G
Sbjct: 499 GDFDEARKVFSLSVEKG 515
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 171/385 (44%), Gaps = 15/385 (3%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
++A +D +G+ +++ LI+ Y ++ A +M + G PD V I+
Sbjct: 362 EVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGIL 421
Query: 200 VSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI 258
+ L ++A + + DR PD +Y L+ G C+ G+ A+ +F +M D I
Sbjct: 422 IHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNI 481
Query: 259 KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
P+ + Y+ +ID R G A VF+ ++ G + V N++++ ++G ++ L
Sbjct: 482 LPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALA 541
Query: 319 VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
N+M + D Y+ +I+ + + +++ A+K+ M K PN T+ S+
Sbjct: 542 CMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFC 601
Query: 379 KLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFA-ESKSIDMVLKLKKEMDENQVEPNV 437
D A + +M+ + +PN +TY L+R A ES +++ + + M N+ PN
Sbjct: 602 CQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNE 661
Query: 438 NTYRILILMFCEK----------GHWNNAYKLMKEM---VEEKSLKPNLQVYENVLELLR 484
T+ L+ F +K G + L E ++ + Y + L L
Sbjct: 662 VTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLC 721
Query: 485 KAGQLKMHEELVEKMVARGFVSRPL 509
G +K +KMV +GF P+
Sbjct: 722 VHGMVKTACMFQDKMVKKGFSPDPV 746
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 134/270 (49%), Gaps = 18/270 (6%)
Query: 123 PEPYIEMLDLAGKLR--HFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHA 180
P+ Y+ + G +R FD A + +GV++ + +I+ + R+G+ EA+
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALAC 542
Query: 181 FNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCR 239
NRM + + PDK S ++ +++ A F + K++ +P+V+ YTSLI+G+C
Sbjct: 543 MNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCC 602
Query: 240 AGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR-CGQITRAHDVFAEMIDAGCNPNAV 298
G + AEE FK+M+ + PNV TY+ +I SL + + +A + M+ C PN V
Sbjct: 603 QGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEV 662
Query: 299 TFNSLMRVHVKA--------------GRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
TFN L++ VK G++ + F++MK + YN + C C
Sbjct: 663 TFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCV 722
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIF 374
++ A + MVKKG +P+ +F +I
Sbjct: 723 HGMVKTACMFQDKMVKKGFSPDPVSFAAIL 752
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 163/350 (46%), Gaps = 38/350 (10%)
Query: 192 DKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIF 250
D + I V L R+ + A D + + DV YT+++H + R GK E+A ++F
Sbjct: 174 DHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLF 233
Query: 251 KDMKDAGIKPNVHTYSIVID-----------------------------------SLC-R 274
+ MK+ G P + TY++++D S C R
Sbjct: 234 ERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAR 293
Query: 275 CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIG 334
G + A + FAE+ G P VT+N+L++V KAG + L V +M+ +C AD++
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVT 353
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMK 394
YN L+ + R +EA V+ +M KKGV PN+ T+ ++ K + A +++ MK
Sbjct: 354 YNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK 413
Query: 395 ELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWN 454
E C+PNT TYN ++ + + + ++K+ +M N PN T+ ++ + KG
Sbjct: 414 EAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDK 473
Query: 455 NAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
++ +EM + +P+ + ++ + G ++ +M GF
Sbjct: 474 FVNRVFREM-KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 171/380 (45%), Gaps = 4/380 (1%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAV-HAFNRM 184
Y +L + ++ A L + MK G T T++V++ + + G + + + M
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 185 EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKI 243
G+ D+ S V+S+ R+ EA+ FF +K +EP + Y +L+ + +AG
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVY 332
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
A + K+M++ + TY+ ++ + R G A V M G PNA+T+ ++
Sbjct: 333 TEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTV 392
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
+ + KAG+ ++ L++F MK C +T YN ++ + E +K+L M G
Sbjct: 393 IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 452
Query: 364 APNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLK 423
+PN +T+N++ +R++ +MK P+ T+N L+ + S K
Sbjct: 453 SPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 424 LKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELL 483
+ EM V TY L+ KG W + ++ +M + K KP Y +L+
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM-KSKGFKPTETSYSLMLQCY 571
Query: 484 RKAGQLKMHEELVEKMVARG 503
K G + E +E + G
Sbjct: 572 AKGGNY-LGIERIENRIKEG 590
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 172/368 (46%), Gaps = 4/368 (1%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A +I+ M +GV A T++ +I Y +AG EA+ F M++ G P+ + V+S
Sbjct: 370 AAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLS 429
Query: 202 SLCRKRRAEEA-QSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
L +K R+ E + D + P+ + +++ G + +F++MK G +P
Sbjct: 430 LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEP 489
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+ T++ +I + RCG A ++ EM AG N T+N+L+ + G V
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 549
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ MK Y+ +++C+ + N ++ N + + + P+ ++ K
Sbjct: 550 SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKC 609
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
+ G+ R + K+ P+ + +N ++ +F + D + + + E+ + P++ TY
Sbjct: 610 RALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTY 669
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
L+ M+ +G A +++K + E+ LKP+L Y V++ + G ++ ++ +M
Sbjct: 670 NSLMDMYVRRGECWKAEEILKTL-EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMT 728
Query: 501 ARGFVSRP 508
RG RP
Sbjct: 729 ERGI--RP 734
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 180/386 (46%), Gaps = 35/386 (9%)
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR 208
+K+ G E T++ L++ + +AG+ EA+ ME+ D V + +V++ R
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366
Query: 209 AEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSI 267
++EA + + K P+ I YT++I + +AGK + A ++F MK+AG PN TY+
Sbjct: 367 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426
Query: 268 VIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFN 327
V+ L + + + +M GC+PN T+N+++ + G + V +VF +MK
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486
Query: 328 CAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAH 387
D +N LI + R + +A K+ M + G +T+N++ +A+ D
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGE 546
Query: 388 RMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILIL-- 445
+ + MK P +Y+++++ +A+ + + +++ + E Q+ P+ R L+L
Sbjct: 547 NVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLAN 606
Query: 446 --------------MFCEKGH---------------WNNAYKLMK---EMVEEKSLKPNL 473
+F + G+ NN Y + E + E L P+L
Sbjct: 607 FKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDL 666
Query: 474 QVYENVLELLRKAGQLKMHEELVEKM 499
Y +++++ + G+ EE+++ +
Sbjct: 667 VTYNSLMDMYVRRGECWKAEEILKTL 692
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/375 (18%), Positives = 158/375 (42%), Gaps = 2/375 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y +L L GK + ++ MK+ G T++ ++ G+ F M+
Sbjct: 424 YNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMK 483
Query: 186 DYGVAPDKVAVSIVVSSLCR-KRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIE 244
G PD+ + ++S+ R + ++ + + + F V Y +L++ R G
Sbjct: 484 SCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWR 543
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
E + DMK G KP +YS+++ + G + + + P+ + +L+
Sbjct: 544 SGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLL 603
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
+ K + F K+ D + +N ++ R+ ++A +L + + G++
Sbjct: 604 LANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLS 663
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
P+ T+NS+ + + A + +++ P+ ++YN +++ F + +++
Sbjct: 664 PDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRM 723
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
EM E + P + TY + + G + ++ E + + +PN ++ V++
Sbjct: 724 LSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVI-ECMAKNDCRPNELTFKMVVDGYC 782
Query: 485 KAGQLKMHEELVEKM 499
+AG+ + V K+
Sbjct: 783 RAGKYSEAMDFVSKI 797
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 8/201 (3%)
Query: 132 LAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAP 191
LAG R F L K G + F+ ++ + R + +A + + G++P
Sbjct: 612 LAGSERAFTL-------FKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSP 664
Query: 192 DKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIF 250
D V + ++ R+ +A+ ++ K + +PD++ Y ++I G+CR G ++ A +
Sbjct: 665 DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRML 724
Query: 251 KDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKA 310
+M + GI+P + TY+ + G DV M C PN +TF ++ + +A
Sbjct: 725 SEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRA 784
Query: 311 GRTEKVLQVFNQMKRFNCAAD 331
G+ + + +++K F+ D
Sbjct: 785 GKYSEAMDFVSKIKTFDPCFD 805
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 145/295 (49%), Gaps = 56/295 (18%)
Query: 144 HLIDSMKTRGVEITAETFSVLIRRYVRAG--LAAEAVHAFNRMEDYGVAPDKVAV-SIVV 200
++I MK++G + T ++S++++ Y + G L E + NR+++ + P + + ++++
Sbjct: 547 NVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIE--NRIKEGQIFPSWMLLRTLLL 604
Query: 201 SSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
++ + A ++F K ++PD++++ S++ + R ++AE I + +++ G+ P
Sbjct: 605 ANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSP 664
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
++ TY+ ++D R G+ +A ++ + + P+ V++N+
Sbjct: 665 DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNT------------------ 706
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI------F 374
+I+ CR ++EAV++L+ M ++G+ P T+N+
Sbjct: 707 -----------------VIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAM 749
Query: 375 GCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE----SKSIDMVLKLK 425
G A++ DV M + +C PN LT+ +++ + S+++D V K+K
Sbjct: 750 GMFAEIEDV------IECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 177/368 (48%), Gaps = 34/368 (9%)
Query: 138 HFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVS 197
+FD W L+ MK G+ F+V I + +AG EA +++ +G++ D V+VS
Sbjct: 286 YFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVS 345
Query: 198 IVVSSLCRKRRAEEAQSFFDSVKDR-----------------------------FE---- 224
V+ C+ + EEA S + R FE
Sbjct: 346 SVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLL 405
Query: 225 PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDV 284
PD + YT++I G+C G+ ++A + F + +G P++ T +I+I + R G I+ A V
Sbjct: 406 PDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESV 465
Query: 285 FAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
F M G + VT+N+LM + K + KV ++ ++M+ + D YN LI
Sbjct: 466 FRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVV 525
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
++EA ++++ ++++G P++ F + G +K D A ++ M +L P+ +T
Sbjct: 526 RGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVT 585
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
+ L+ + +++ ++ + L ++ + ++P+V Y LI +C G A +L+ MV
Sbjct: 586 CSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMV 645
Query: 465 EEKSLKPN 472
++ + PN
Sbjct: 646 -QRGMLPN 652
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 160/378 (42%), Gaps = 35/378 (9%)
Query: 147 DSMKTRGVEITAET-FSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCR 205
D +TR ET FS+LI +R A+ +++ +G+ P + ++ + R
Sbjct: 189 DLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILR 248
Query: 206 KRRAEEAQSFFDSVKDRFEP-DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHT 264
E A+ F + + R + + + I +C G ++ E+ MK GI+P++
Sbjct: 249 VHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVA 308
Query: 265 YSIVIDSLCRCGQITRAHDVFAEM---------------IDAGCN--------------- 294
+++ ID LC+ G + A V ++ ID C
Sbjct: 309 FTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR 368
Query: 295 --PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAV 352
PN ++S + G + +F ++ D + Y +I+ +C ++A
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 353 KVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMF 412
+ ++K G P+ +T + G ++ ++ A ++ MK + +TYN LM +
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 413 AESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPN 472
++ ++ V +L EM + P+V TY ILI +G+ + A +++ E++ + P+
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELI-RRGFVPS 547
Query: 473 LQVYENVLELLRKAGQLK 490
+ +V+ K G +
Sbjct: 548 TLAFTDVIGGFSKRGDFQ 565
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 161 FSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK 220
++ +I Y G +A F + G P +I++ + R +A+S F ++K
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 221 -DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQIT 279
+ + DV+ Y +L+HG+ + ++ + E+ +M+ AGI P+V TY+I+I S+ G I
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
A+++ +E+I G P+ + F ++ K G ++ ++ M D + + L+
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
+C+ + +E+A+ + N ++ G+ P+ +N++ + D+ A + M + L
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Query: 400 PNTLTYNILM 409
PN T++ L+
Sbjct: 651 PNESTHHALV 660
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 177/368 (48%), Gaps = 34/368 (9%)
Query: 138 HFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVS 197
+FD W L+ MK G+ F+V I + +AG EA +++ +G++ D V+VS
Sbjct: 286 YFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVS 345
Query: 198 IVVSSLCRKRRAEEAQSFFDSVKDR-----------------------------FE---- 224
V+ C+ + EEA S + R FE
Sbjct: 346 SVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLL 405
Query: 225 PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDV 284
PD + YT++I G+C G+ ++A + F + +G P++ T +I+I + R G I+ A V
Sbjct: 406 PDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESV 465
Query: 285 FAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
F M G + VT+N+LM + K + KV ++ ++M+ + D YN LI
Sbjct: 466 FRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVV 525
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
++EA ++++ ++++G P++ F + G +K D A ++ M +L P+ +T
Sbjct: 526 RGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVT 585
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
+ L+ + +++ ++ + L ++ + ++P+V Y LI +C G A +L+ MV
Sbjct: 586 CSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMV 645
Query: 465 EEKSLKPN 472
++ + PN
Sbjct: 646 -QRGMLPN 652
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 160/378 (42%), Gaps = 35/378 (9%)
Query: 147 DSMKTRGVEITAET-FSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCR 205
D +TR ET FS+LI +R A+ +++ +G+ P + ++ + R
Sbjct: 189 DLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILR 248
Query: 206 KRRAEEAQSFFDSVKDRFEP-DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHT 264
E A+ F + + R + + + I +C G ++ E+ MK GI+P++
Sbjct: 249 VHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVA 308
Query: 265 YSIVIDSLCRCGQITRAHDVFAEM---------------IDAGCN--------------- 294
+++ ID LC+ G + A V ++ ID C
Sbjct: 309 FTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR 368
Query: 295 --PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAV 352
PN ++S + G + +F ++ D + Y +I+ +C ++A
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 353 KVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMF 412
+ ++K G P+ +T + G ++ ++ A ++ MK + +TYN LM +
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 413 AESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPN 472
++ ++ V +L EM + P+V TY ILI +G+ + A +++ E++ + P+
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELI-RRGFVPS 547
Query: 473 LQVYENVLELLRKAGQLK 490
+ +V+ K G +
Sbjct: 548 TLAFTDVIGGFSKRGDFQ 565
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 161 FSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK 220
++ +I Y G +A F + G P +I++ + R +A+S F ++K
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 221 -DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQIT 279
+ + DV+ Y +L+HG+ + ++ + E+ +M+ AGI P+V TY+I+I S+ G I
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
A+++ +E+I G P+ + F ++ K G ++ ++ M D + + L+
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
+C+ + +E+A+ + N ++ G+ P+ +N++ + D+ A + M + L
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Query: 400 PNTLTYNILM 409
PN T++ L+
Sbjct: 651 PNESTHHALV 660
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 185/385 (48%), Gaps = 4/385 (1%)
Query: 122 SPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAF 181
SP E++ G+ + A + K R + T+ T++ +I ++ G + +
Sbjct: 161 SPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVY 220
Query: 182 NRMEDYG-VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCR 239
M + G PD + S ++SS + R + A FD +KD +P +YT+L+ + +
Sbjct: 221 TEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFK 280
Query: 240 AGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVT 299
GK+E+A ++F++MK AG P V+TY+ +I L + G++ A+ + +M+ G P+ V
Sbjct: 281 VGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVF 340
Query: 300 FNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDE-NLEEAVKVLNLM 358
N+LM + K GR E++ VF++M + C + YN +I+ + ++ E + M
Sbjct: 341 LNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM 400
Query: 359 VKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSI 418
V+P+ T++ + K + V A + +M E P Y L+ ++K
Sbjct: 401 KADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Query: 419 DMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYEN 478
+ +L KE+ EN + Y ++I F + G + A L EM + S P++ Y
Sbjct: 461 EAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGS-GPDVYAYNA 519
Query: 479 VLELLRKAGQLKMHEELVEKMVARG 503
++ + KAG + L+ KM G
Sbjct: 520 LMSGMVKAGMINEANSLLRKMEENG 544
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 180/400 (45%), Gaps = 39/400 (9%)
Query: 119 FPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAV 178
FP + Y ++ KL D A L D MK ++ T + ++ L+ Y + G +A+
Sbjct: 230 FPDTI-TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKAL 288
Query: 179 HAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGW 237
F M+ G +P + ++ L + R +EA F+ D ++D PDV+ +L++
Sbjct: 289 DLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNIL 348
Query: 238 CRAGKIERAEEIFKDM------------------------------------KDAGIKPN 261
+ G++E +F +M K + P+
Sbjct: 349 GKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPS 408
Query: 262 VHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFN 321
TYSI+ID C+ ++ +A + EM + G P + SL+ KA R E ++F
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFK 468
Query: 322 QMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLH 381
++K + Y +I+ + L EAV + N M +G P+ +N++ + K
Sbjct: 469 ELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAG 528
Query: 382 DVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYR 441
+N A+ + KM+E C + ++NI++ FA + +++ + + + ++P+ TY
Sbjct: 529 MINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYN 588
Query: 442 ILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
L+ F G + A ++M+EM ++K + + Y ++L+
Sbjct: 589 TLLGCFAHAGMFEEAARMMREM-KDKGFEYDAITYSSILD 627
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 116/240 (48%), Gaps = 3/240 (1%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
+W D MK V + T+S+LI Y + +A+ M++ G P A +++
Sbjct: 395 SW--FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 452
Query: 202 SLCRKRRAEEAQSFFDSVKDRF-EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
+L + +R E A F +K+ F +Y +I + + GK+ A ++F +MK+ G P
Sbjct: 453 ALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGP 512
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+V+ Y+ ++ + + G I A+ + +M + GC + + N ++ + G + +++F
Sbjct: 513 DVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMF 572
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+K D + YN L+ C EEA +++ M KG ++ T++SI + +
Sbjct: 573 ETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 99/189 (52%), Gaps = 1/189 (0%)
Query: 117 KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
K FP P Y +++ GK + ++ A L +K +++ ++V+I+ + + G +E
Sbjct: 438 KGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSE 497
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRF-EPDVILYTSLIH 235
AV FN M++ G PD A + ++S + + EA S +++ D+ + +++
Sbjct: 498 AVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILN 557
Query: 236 GWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNP 295
G+ R G RA E+F+ +K +GIKP+ TY+ ++ G A + EM D G
Sbjct: 558 GFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEY 617
Query: 296 NAVTFNSLM 304
+A+T++S++
Sbjct: 618 DAITYSSIL 626
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKG-VAPNSSTFNSIFGCIAKLHD 382
KR N D Y LI C E + + +V+ V+ + + + + + +
Sbjct: 118 KRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKM 177
Query: 383 VNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEM-DENQVEPNVNTYR 441
V+ A ++ + K C P + TYN ++ M + + V ++ EM +E P+ TY
Sbjct: 178 VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYS 237
Query: 442 ILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVA 501
LI + + G ++A +L EM ++ ++P ++Y +L + K G+++ +L E+M
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEM-KDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR 296
Query: 502 RG 503
G
Sbjct: 297 AG 298
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 203/420 (48%), Gaps = 23/420 (5%)
Query: 107 LAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFD-----------------LAW-HLIDS 148
L FN A+ + F + Y +M+ + + R++ + W L+
Sbjct: 88 LEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRV 147
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR 208
K + F ++++ Y GL A+H F+ M +YG P ++ + ++S+L RK
Sbjct: 148 FKE--FSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGE 205
Query: 209 AEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDA-GIKPNVHTYS 266
A +D + PDV + +++ +CR+G +++A K+ + + G++ NV TY+
Sbjct: 206 NFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYN 265
Query: 267 IVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF 326
+I+ G + V M + G + N VT+ SL++ + K G E+ VF +K
Sbjct: 266 SLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEK 325
Query: 327 NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGA 386
AD Y L++ +CR + +AV+V + M++ GV N++ NS+ K + A
Sbjct: 326 KLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEA 385
Query: 387 HRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILM 446
+++++M + + P+ TYN L+ + + +D LKL +M + +V P V TY IL+
Sbjct: 386 EQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKG 445
Query: 447 FCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVS 506
+ G +++ L K M+ ++ + + +LE L K G +L E ++ARG ++
Sbjct: 446 YSRIGAFHDVLSLWKMML-KRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLT 504
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 157/329 (47%), Gaps = 2/329 (0%)
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR 208
M RGV T++ LI+ Y + GL EA H F +++ + D+ +++ CR +
Sbjct: 287 MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQ 346
Query: 209 AEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSI 267
+A D+ ++ + + SLI+G+C++G++ AE+IF M D +KP+ HTY+
Sbjct: 347 IRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNT 406
Query: 268 VIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFN 327
++D CR G + A + +M P +T+N L++ + + G VL ++ M +
Sbjct: 407 LVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG 466
Query: 328 CAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAH 387
AD I + L+E + + EA+K+ ++ +G+ ++ T N + + K+ VN A
Sbjct: 467 VNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAK 526
Query: 388 RMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMF 447
+ + C P TY L + + ++ +K+ M+ + P + Y LI
Sbjct: 527 EILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGA 586
Query: 448 CEKGHWNNAYKLMKEMVEEKSLKPNLQVY 476
+ H N L+ E+ + L P + Y
Sbjct: 587 FKYRHLNKVADLVIEL-RARGLTPTVATY 614
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 164/360 (45%), Gaps = 2/360 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A H+ + +K + + + VL+ Y R G +AV + M + GV + + +++
Sbjct: 315 AEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLIN 374
Query: 202 SLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
C+ + EA+ F + D +PD Y +L+ G+CRAG ++ A ++ M + P
Sbjct: 375 GYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVP 434
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
V TY+I++ R G ++ M+ G N + ++ ++L+ K G + ++++
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 494
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ DTI N +I C+ E + EA ++L+ + P T+ ++ K+
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKV 554
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
++ A + M+ P YN L+ + + ++ V L E+ + P V TY
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATY 614
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
LI +C G + AY EM+ EK + N+ + + L + ++ L++K+V
Sbjct: 615 GALITGWCNIGMIDKAYATCFEMI-EKGITLNVNICSKIANSLFRLDKIDEACLLLQKIV 673
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 174/401 (43%), Gaps = 49/401 (12%)
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR 208
M RGV + S L+ + G EA+ + + G+ D + +++++S LC+ +
Sbjct: 462 MLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEK 521
Query: 209 AEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERA--------------------- 246
EA+ D+V R +P V Y +L HG+ + G ++ A
Sbjct: 522 VNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNT 581
Query: 247 --------------EEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAG 292
++ +++ G+ P V TY +I C G I +A+ EMI+ G
Sbjct: 582 LISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKG 641
Query: 293 CNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIE------CHC-RD 345
N + + + + ++ + ++ F+ GY L E C +
Sbjct: 642 ITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLP--GYQSLKEFLEASATTCLKT 699
Query: 346 ENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELN-CLPNTLT 404
+ + E+V+ N KK + PN+ +N + K + A ++++ + + +P+ T
Sbjct: 700 QKIAESVE--NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYT 757
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
Y IL+ A + I+ L+ EM + PN+ TY LI C+ G+ + A +L+ ++
Sbjct: 758 YTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKL- 816
Query: 465 EEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
+K + PN Y +++ L K+G + L EKM+ +G V
Sbjct: 817 PQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 149/337 (44%), Gaps = 5/337 (1%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV 194
K+ + A ++D++ + +T+ L Y + G EA ME G+ P
Sbjct: 518 KMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIE 577
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
+ ++S + R + ++ R P V Y +LI GWC G I++A +M
Sbjct: 578 MYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM 637
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCN-PNAVTFNSLMRVHVKAG- 311
+ GI NV+ S + +SL R +I A + +++D P + +
Sbjct: 638 IEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCL 697
Query: 312 RTEKVLQ-VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVL-NLMVKKGVAPNSST 369
+T+K+ + V N + + I YN I C+ LE+A K+ +L+ P+ T
Sbjct: 698 KTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYT 757
Query: 370 FNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMD 429
+ + A D+N A + +M +PN +TYN L++ + ++D +L ++
Sbjct: 758 YTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLP 817
Query: 430 ENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEE 466
+ + PN TY LI + G+ A +L ++M+E+
Sbjct: 818 QKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEK 854
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 131/289 (45%), Gaps = 41/289 (14%)
Query: 119 FPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAV 178
FP+ E Y ++ A K RH + L+ ++ RG+ T T+ LI + G+ +A
Sbjct: 573 FPT-IEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAY 631
Query: 179 HAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA----QSFFD---------SVKDRFE- 224
M + G+ + S + +SL R + +EA Q D S+K+ E
Sbjct: 632 ATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEA 691
Query: 225 -------------------------PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAG-I 258
P+ I+Y I G C+AGK+E A ++F D+ +
Sbjct: 692 SATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRF 751
Query: 259 KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
P+ +TY+I+I G I +A + EM G PN VT+N+L++ K G ++ +
Sbjct: 752 IPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQR 811
Query: 319 VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
+ +++ + + I YN LI+ + N+ EA+++ M++KG+ S
Sbjct: 812 LLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGS 860
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 173/340 (50%), Gaps = 2/340 (0%)
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR 208
M G+E T S L+ + + +AV+ +ME G+ D V +I++ +LC+ R
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 209 AEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSI 267
A +KDR P+V+ Y+SLI G C++G++ AE +M I PNV T+S
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 268 VIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFN 327
+ID+ + G++++ V+ MI +PN T++SL+ R ++ +++ + M
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 328 CAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAH 387
C + + Y+ L + +++ +K+L+ M ++GVA N+ + N++ + ++ A
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 388 RMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMF 447
++ M +PN +YNI++ + ++ L + M + + + ++ TY I+I
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGM 303
Query: 448 CEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
C+ AY L ++ + K ++P+ + Y ++ L +AG
Sbjct: 304 CKACMVKEAYDLFYKL-KFKRVEPDFKAYTIMIAELNRAG 342
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 140/282 (49%), Gaps = 1/282 (0%)
Query: 183 RMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAG 241
+M G+ PD V S +V+ C ++A + K + DV++ T LI C+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 242 KIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFN 301
+ A E+ K MKD GI PNV TYS +I LC+ G++ A EM NPN +TF+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 302 SLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKK 361
+L+ + K G+ KV V+ M + + + Y+ LI C ++EA+K+L+LM+ K
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 362 GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMV 421
G PN T++++ K V+ ++ M + NT++ N L++ + ++ ID+
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 422 LKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
L + M N + PN+ +Y I++ G A + M
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 151/304 (49%), Gaps = 1/304 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A ++ M+ G++ ++LI + L A+ RM+D G++P+ V S +++
Sbjct: 32 AVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLIT 91
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC+ R +A+ + + P+VI +++LI + + GK+ + + ++K M I P
Sbjct: 92 GLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDP 151
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
NV TYS +I LC ++ A + MI GC PN VT+++L K+ R + +++
Sbjct: 152 NVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLL 211
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ M + AA+T+ N LI+ + + ++ A+ V M G+ PN ++N + +
Sbjct: 212 DDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFAN 271
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
+V A + M++ + +TY I++ ++ + L ++ +VEP+ Y
Sbjct: 272 GEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAY 331
Query: 441 RILI 444
I+I
Sbjct: 332 TIMI 335
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV 194
K D L+D M RGV + + LI+ Y +AG A+ F M G+ P+
Sbjct: 200 KSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIR 259
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
+ +IV++ L E+A S F+ + K R + D+I YT +IHG C+A ++ A ++F +
Sbjct: 260 SYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKL 319
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRA 281
K ++P+ Y+I+I L R G T A
Sbjct: 320 KFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Query: 358 MVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKS 417
M+K G+ P+ T +S+ + + A + +M+++ + + IL+ +++
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 418 IDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYE 477
+ L++ K M + + PNV TY LI C+ G +A + + EM + K + PN+ +
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM-DSKKINPNVITFS 122
Query: 478 NVLELLRKAGQLKMHEELVEKMV 500
+++ K G+L + + + M+
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMI 145
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 176/360 (48%), Gaps = 10/360 (2%)
Query: 134 GKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDK 193
GKL HF A L+ S + G + + L+ V+ +A+ F+ + D
Sbjct: 152 GKL-HFATAL-LLQSFEVEGCCMVVNS---LLNTLVKLDRVEDAMKLFDEHLRFQSCNDT 206
Query: 194 VAVSIVVSSLCRKRRAEEAQSFFDSVKDRF--EPDVILYTSLIHGWCRAGKIERAEEIFK 251
+I++ LC +AE+A V F EPD++ Y +LI G+C++ ++ +A E+FK
Sbjct: 207 KTFNILIRGLCGVGKAEKALELL-GVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 252 DMKDAGI-KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKA 310
D+K + P+V TY+ +I C+ G++ A + +M+ G P VTFN L+ + KA
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 311 GRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
G ++ +M F C D + + LI+ +CR + + ++ M +G+ PN+ T+
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE 430
+ + + + + A + ++ + +P YN ++ F ++ ++ + +EM++
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445
Query: 431 NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK 490
+ +P+ T+ ILI+ C KG A + +MV P+ ++L L KAG K
Sbjct: 446 KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV-AIGCSPDKITVSSLLSCLLKAGMAK 504
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 168/346 (48%), Gaps = 13/346 (3%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA-----QS 214
T+++L R +AGL A F M+ GV+P+ + +VSS K + A QS
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 215 FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
F E ++ SL++ + ++E A ++F + + T++I+I LC
Sbjct: 165 F------EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 275 CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFN-CAADTI 333
G+ +A ++ M GC P+ VT+N+L++ K+ K ++F +K + C+ D +
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM 393
Y +I +C+ + EA +L+ M++ G+ P + TFN + AK ++ A + KM
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 394 KELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHW 453
C P+ +T+ L+ + + +L +EM+ + PN TY ILI C +
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 454 NNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
A +L+ ++ K + P +Y V++ KAG++ +VE+M
Sbjct: 399 LKARELLGQLA-SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 115/237 (48%), Gaps = 9/237 (3%)
Query: 133 AGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAG--LAAEAVHAFNRMEDYGVA 190
AGK+R A L+D M G+ T TF+VL+ Y +AG L AE + +M +G
Sbjct: 290 AGKMRE---ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG--KMISFGCF 344
Query: 191 PDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEI 249
PD V + ++ CR + + ++ + R P+ Y+ LI+ C ++ +A E+
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVK 309
+ I P Y+ VID C+ G++ A+ + EM C P+ +TF L+ H
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 310 AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPN 366
GR + + +F++M C+ D I + L+ C + +EA LN + +KG + N
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIARKGQSNN 520
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 132/276 (47%), Gaps = 6/276 (2%)
Query: 230 YTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMI 289
Y L C+AG + A ++F+ MK G+ PN ++ S G++ A + +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 290 DA-GCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL 348
+ GC + NSL+ VK R E +++F++ RF DT +N LI C
Sbjct: 166 EVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 349 EEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELN-CLPNTLTYNI 407
E+A+++L +M G P+ T+N++ K +++N A M+ +K + C P+ +TY
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 408 LMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEK 467
++ + ++ + L +M + P T+ +L+ + + G A ++ +M+
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 468 SLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
P++ + ++++ + GQ+ L E+M ARG
Sbjct: 343 CF-PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 37/201 (18%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
+ ++D ++ + L + M RG+ A T+S+LI
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI-------------------- 389
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIE 244
++LC + R +A+ + + P +Y +I G+C+AGK+
Sbjct: 390 ---------------NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A I ++M+ KP+ T++I+I C G++ A +F +M+ GC+P+ +T +SL+
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 305 RVHVKAGRTEKVLQVFNQMKR 325
+KAG ++ + NQ+ R
Sbjct: 495 SCLLKAGMAKEAYHL-NQIAR 514
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 2/205 (0%)
Query: 299 TFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLM 358
T+N L R KAG + Q+F MK + + FL+ L A +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 359 VKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSI 418
V NS+ + KL V A +++ + +T T+NIL+R
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 419 DMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYEN 478
+ L+L M EP++ TY LI FC+ N A ++ K++ P++ Y +
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 479 VLELLRKAGQLKMHEELVEKMVARG 503
++ KAG+++ L++ M+ G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLG 307
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 176/360 (48%), Gaps = 10/360 (2%)
Query: 134 GKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDK 193
GKL HF A L+ S + G + + L+ V+ +A+ F+ + D
Sbjct: 152 GKL-HFATAL-LLQSFEVEGCCMVVNS---LLNTLVKLDRVEDAMKLFDEHLRFQSCNDT 206
Query: 194 VAVSIVVSSLCRKRRAEEAQSFFDSVKDRF--EPDVILYTSLIHGWCRAGKIERAEEIFK 251
+I++ LC +AE+A V F EPD++ Y +LI G+C++ ++ +A E+FK
Sbjct: 207 KTFNILIRGLCGVGKAEKALELL-GVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 252 DMKDAGI-KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKA 310
D+K + P+V TY+ +I C+ G++ A + +M+ G P VTFN L+ + KA
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 311 GRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
G ++ +M F C D + + LI+ +CR + + ++ M +G+ PN+ T+
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE 430
+ + + + + A + ++ + +P YN ++ F ++ ++ + +EM++
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445
Query: 431 NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK 490
+ +P+ T+ ILI+ C KG A + +MV P+ ++L L KAG K
Sbjct: 446 KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV-AIGCSPDKITVSSLLSCLLKAGMAK 504
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 168/346 (48%), Gaps = 13/346 (3%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA-----QS 214
T+++L R +AGL A F M+ GV+P+ + +VSS K + A QS
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 215 FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
F E ++ SL++ + ++E A ++F + + T++I+I LC
Sbjct: 165 F------EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 275 CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFN-CAADTI 333
G+ +A ++ M GC P+ VT+N+L++ K+ K ++F +K + C+ D +
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM 393
Y +I +C+ + EA +L+ M++ G+ P + TFN + AK ++ A + KM
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 394 KELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHW 453
C P+ +T+ L+ + + +L +EM+ + PN TY ILI C +
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 454 NNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
A +L+ ++ K + P +Y V++ KAG++ +VE+M
Sbjct: 399 LKARELLGQLA-SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 115/237 (48%), Gaps = 9/237 (3%)
Query: 133 AGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAG--LAAEAVHAFNRMEDYGVA 190
AGK+R A L+D M G+ T TF+VL+ Y +AG L AE + +M +G
Sbjct: 290 AGKMRE---ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG--KMISFGCF 344
Query: 191 PDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEI 249
PD V + ++ CR + + ++ + R P+ Y+ LI+ C ++ +A E+
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVK 309
+ I P Y+ VID C+ G++ A+ + EM C P+ +TF L+ H
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 310 AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPN 366
GR + + +F++M C+ D I + L+ C + +EA LN + +KG + N
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIARKGQSNN 520
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 132/276 (47%), Gaps = 6/276 (2%)
Query: 230 YTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMI 289
Y L C+AG + A ++F+ MK G+ PN ++ S G++ A + +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 290 DA-GCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL 348
+ GC + NSL+ VK R E +++F++ RF DT +N LI C
Sbjct: 166 EVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 349 EEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELN-CLPNTLTYNI 407
E+A+++L +M G P+ T+N++ K +++N A M+ +K + C P+ +TY
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 408 LMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEK 467
++ + ++ + L +M + P T+ +L+ + + G A ++ +M+
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 468 SLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
P++ + ++++ + GQ+ L E+M ARG
Sbjct: 343 CF-PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 37/201 (18%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
+ ++D ++ + L + M RG+ A T+S+LI
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI-------------------- 389
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIE 244
++LC + R +A+ + + P +Y +I G+C+AGK+
Sbjct: 390 ---------------NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A I ++M+ KP+ T++I+I C G++ A +F +M+ GC+P+ +T +SL+
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 305 RVHVKAGRTEKVLQVFNQMKR 325
+KAG ++ + NQ+ R
Sbjct: 495 SCLLKAGMAKEAYHL-NQIAR 514
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 2/205 (0%)
Query: 299 TFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLM 358
T+N L R KAG + Q+F MK + + FL+ L A +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 359 VKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSI 418
V NS+ + KL V A +++ + +T T+NIL+R
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 419 DMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYEN 478
+ L+L M EP++ TY LI FC+ N A ++ K++ P++ Y +
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 479 VLELLRKAGQLKMHEELVEKMVARG 503
++ KAG+++ L++ M+ G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLG 307
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 184/402 (45%), Gaps = 45/402 (11%)
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR 208
M+ G +T +F+ LI Y + GL +A + M + G+ P +I + +LC R
Sbjct: 299 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 358
Query: 209 AEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIV 268
++A+ S+ PDV+ Y +L+HG+ + GK A +F D++ I P++ TY+ +
Sbjct: 359 IDDARELLSSMA---APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 415
Query: 269 IDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNC 328
ID LC G + A + EM P+ +T+ +L++ VK G +V+++M R
Sbjct: 416 IDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI 475
Query: 329 ------------------------------------AADTIGYNFLIECHCRDENLEEAV 352
A D YN I+ C+ NL +A+
Sbjct: 476 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535
Query: 353 KVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMF 412
+ + + G+ P+ T+ ++ + A +Y +M P+ +TY +L+
Sbjct: 536 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGH 595
Query: 413 AESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPN 472
A++ ++ + EM + V PNV T+ L+ C+ G+ + AY+ + +M EE+ + PN
Sbjct: 596 AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM-EEEGIPPN 654
Query: 473 LQVYENVL----ELLRKAGQLKMHEELVEKMVA-RGFVSRPL 509
Y ++ + + +K+++E+++K + G+ R L
Sbjct: 655 KYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 180/415 (43%), Gaps = 69/415 (16%)
Query: 118 NFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSV-------------- 163
F +P + +++ K FD AW + D M G+ T T+++
Sbjct: 303 GFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA 362
Query: 164 -----------------LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRK 206
L+ Y++ G EA F+ + + P V + ++ LC
Sbjct: 363 RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 207 RRAEEAQSFFDSVKDRF-EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTY 265
E AQ + + + PDVI YT+L+ G+ + G + A E++ +M GIKP+ + Y
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Query: 266 S------------------------------------IVIDSLCRCGQITRAHDVFAEMI 289
+ + ID LC+ G + +A + ++
Sbjct: 483 TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF 542
Query: 290 DAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLE 349
G P+ VT+ +++R +++ G+ + ++++M R I Y LI H + LE
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 350 EAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILM 409
+A + M K+GV PN T N++ + K +++ A+R KM+E PN +Y +L+
Sbjct: 603 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Query: 410 RMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
+ + + V+KL KEM + ++EP+ T+R L EK H + + ++ ++
Sbjct: 663 SKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL-FKHLEKDHESREVEFLERLL 716
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 183/450 (40%), Gaps = 54/450 (12%)
Query: 106 SLAFFNWATSLKNFPSSPEPYIEMLDLAGK-----------LRHFDLAWHLIDSMKTRGV 154
+ FFNW + S + + ML++ + R DL H ID + G
Sbjct: 102 AFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLLIDGS 161
Query: 155 -------------------EITAETFSVLIRRYVRAG-------------------LAAE 176
+ AE F + + +R G + +
Sbjct: 162 FDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNK 221
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIH 235
A + M ++G+ P + + ++ S + E + +K R E + Y LI+
Sbjct: 222 ASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILIN 281
Query: 236 GWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNP 295
G+ + GK+E A DM+ +G ++++ +I+ C+ G A V EM++AG P
Sbjct: 282 GFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYP 341
Query: 296 NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVL 355
T+N + GR + ++ + M A D + YN L+ + + EA +
Sbjct: 342 TTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLF 397
Query: 356 NLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAES 415
+ + + P+ T+N++ + + ++ GA R+ +M P+ +TY L++ F ++
Sbjct: 398 DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457
Query: 416 KSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQV 475
++ M ++ EM ++P+ Y + G + A++L +EMV P+L +
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 517
Query: 476 YENVLELLRKAGQLKMHEELVEKMVARGFV 505
Y ++ L K G L E K+ G V
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLV 547
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 170/370 (45%), Gaps = 11/370 (2%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
R + A + ++M G+ T TF+ ++ +AG + M+ + +V
Sbjct: 217 RMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTY 276
Query: 197 SIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD 255
+I+++ + + EEA+ F D + F + LI G+C+ G + A + +M +
Sbjct: 277 NILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLN 336
Query: 256 AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEK 315
AGI P TY+I I +LC G+I A ++ + M P+ V++N+LM ++K G+ +
Sbjct: 337 AGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVE 392
Query: 316 VLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFG 375
+F+ ++ + + YN LI+ C NLE A ++ M + + P+ T+ ++
Sbjct: 393 ASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVK 452
Query: 376 CIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESK--SIDMVLKLKKEM-DENQ 432
K +++ A +Y +M P+ Y R E + D +L +EM +
Sbjct: 453 GFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT--RAVGELRLGDSDKAFRLHEEMVATDH 510
Query: 433 VEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMH 492
P++ Y + I C+ G+ A + +++ L P+ Y V+ + GQ KM
Sbjct: 511 HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF-RVGLVPDHVTYTTVIRGYLENGQFKMA 569
Query: 493 EELVEKMVAR 502
L ++M+ +
Sbjct: 570 RNLYDEMLRK 579
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 1/201 (0%)
Query: 306 VHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
V+ K EK L F +M R N +++ + +A V M++ G+ P
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 236
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLK 425
TFN++ K D+ +++ +MK N + +TYNIL+ F+++ ++ +
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 426 KEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRK 485
+M + ++ LI +C++G +++A+ + EM+ + P Y + L
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML-NAGIYPTTSTYNIYICALCD 355
Query: 486 AGQLKMHEELVEKMVARGFVS 506
G++ EL+ M A VS
Sbjct: 356 FGRIDDARELLSSMAAPDVVS 376
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 179/370 (48%), Gaps = 13/370 (3%)
Query: 105 QSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITA-ETFSV 163
++L FF ++ + + + + L + ++R+FD AW L+ ++ + + ++ S+
Sbjct: 85 KALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWALMAEVRKDYPNLLSFKSMSI 144
Query: 164 LIRRYVRAGLAAEAVHAFNRMED------YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFD 217
L+ + + G E + AF +ME +GV +I++ + C +R +EA+S F+
Sbjct: 145 LLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVD----EFNILLRAFCTEREMKEARSIFE 200
Query: 218 SVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQ 277
+ RF PDV L+ G+ AG + E + +M G KPN TY I ID C+
Sbjct: 201 KLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRN 260
Query: 278 ITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNF 337
A +F +M + +L+ A K Q+F+++ + D YN
Sbjct: 261 FGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNA 320
Query: 338 LIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHD--VNGAHRMYAKMKE 395
L+ + ++ A+KV+ M +KG+ P+S TF+S+F + K + NG Y KMKE
Sbjct: 321 LMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKE 380
Query: 396 LNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNN 455
+ +P T T +LM++F + +++ L L K M E P+ + +L C + N+
Sbjct: 381 RSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRAND 440
Query: 456 AYKLMKEMVE 465
A++ + VE
Sbjct: 441 AFECSWQTVE 450
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 177/381 (46%), Gaps = 6/381 (1%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
+L+ K + + A L+ M+ G +++ LI+ +A++ FN M YG
Sbjct: 162 LLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYG 221
Query: 189 VAPDKVAVSIVVSSLCRK-----RRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKI 243
+ P++V +I+V +LC+K + + DS + D+++ T L+ + G +
Sbjct: 222 IRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNV 281
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
+A E++K+M + + Y+++I LC G + A+ +M+ G NP+ T+N+L
Sbjct: 282 VQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTL 341
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
+ K G+ ++ + M+ A D I Y +I+ C ++ A + L M+K +
Sbjct: 342 ISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSL 401
Query: 364 APNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLK 423
P +N + + D + A + M PN T N L+ + + +
Sbjct: 402 LPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWW 461
Query: 424 LKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELL 483
+K EM ++ P+ TY +L+ C GH A++L EM+ + +P++ Y ++ L
Sbjct: 462 VKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEML-RRGCQPDIITYTELVRGL 520
Query: 484 RKAGQLKMHEELVEKMVARGF 504
G+LK E L+ ++ A G
Sbjct: 521 CWKGRLKKAESLLSRIQATGI 541
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 122/279 (43%), Gaps = 1/279 (0%)
Query: 115 SLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLA 174
S KN P+ Y ++ + A+ + M RGV T++ LI + G
Sbjct: 292 SQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKF 351
Query: 175 AEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFE-PDVILYTSL 233
EA M++ GVAPD+++ +++ LC A F S+ P+V+L+ +
Sbjct: 352 DEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVV 411
Query: 234 IHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGC 293
I G+ R G A + M G+KPNV+T + +I + G++ A V EM
Sbjct: 412 IDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKI 471
Query: 294 NPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVK 353
+P+ T+N L+ G Q++++M R C D I Y L+ C L++A
Sbjct: 472 HPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAES 531
Query: 354 VLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAK 392
+L+ + G+ + F + +L A+ +Y K
Sbjct: 532 LLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKK 570
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 150/323 (46%), Gaps = 10/323 (3%)
Query: 181 FNRMEDYGVAPDKVAVSIVVSSLCRK---RRAEEAQSFFDSVKDRFEPDVILYTSLIHGW 237
F+ +DY D A+ V+ + + R A +S + ++ + +++S++
Sbjct: 72 FSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDL 131
Query: 238 CRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNA 297
C GK++ A + K M +G+ P + T++ +++ LC+ G I +A + EM + G +PN
Sbjct: 132 CLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNC 191
Query: 298 VTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVL-- 355
V++N+L++ +K L +FN M ++ + + N ++ C+ + K L
Sbjct: 192 VSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLE 251
Query: 356 -NLMVKKGVAPNSSTFNSIF--GCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMF 412
L + AP +I C K +V A ++ +M + N +++ YN+++R
Sbjct: 252 EILDSSQANAPLDIVICTILMDSCF-KNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGL 310
Query: 413 AESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPN 472
S ++ +M + V P+V TY LI C++G ++ A L M + + P+
Sbjct: 311 CSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM-QNGGVAPD 369
Query: 473 LQVYENVLELLRKAGQLKMHEEL 495
Y+ +++ L G + E
Sbjct: 370 QISYKVIIQGLCIHGDVNRANEF 392
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 185/375 (49%), Gaps = 7/375 (1%)
Query: 133 AGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPD 192
AGK+ D A + MK G+E ++ LIR + G F+ + + G +P
Sbjct: 225 AGKM---DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPC 281
Query: 193 KVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFK 251
+ + ++ C+ + +EA F+ + +R P+V YT LI G C GK + A ++
Sbjct: 282 AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLN 341
Query: 252 DMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAG 311
M + +PN TY+I+I+ LC+ G + A ++ M P+ +T+N L+ G
Sbjct: 342 LMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG 401
Query: 312 RTEKVLQVFNQMKRFNCAA--DTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSST 369
++ ++ M + + D I YN LI C++ L +A+ + +L+V+K A + T
Sbjct: 402 DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT 461
Query: 370 FNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMD 429
N + K DVN A ++ ++ + + N+ TY ++ F ++ +++ L +M
Sbjct: 462 TNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMR 521
Query: 430 ENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQL 489
++++P+V Y L+ C++G + A++L +EM + + P++ + +++ KAG +
Sbjct: 522 VSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKAGDI 580
Query: 490 KMHEELVEKMVARGF 504
K E L+ M G
Sbjct: 581 KSAESLLVGMSRAGL 595
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 178/371 (47%), Gaps = 6/371 (1%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
R+ +LA+ M I + S L+ YV+ A M G A +
Sbjct: 86 RNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNH 145
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD 255
+I++ LCR +A S ++ + PDV Y ++I G+C ++E+A E+ +MK
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 256 AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEK 315
+G ++ T+ I+ID+ C+ G++ A EM G + V + SL+R G ++
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265
Query: 316 VLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFG 375
+F+++ + I YN LI C+ L+EA ++ M+++GV PN T+ +
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Query: 376 CIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEP 435
+ + A ++ M E + PN +TYNI++ + + +++ + M + + P
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 436 NVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSL-KPNLQVYENVLELLRKAGQ----LK 490
+ TY IL+ C KG + A KL+ M+++ S P++ Y ++ L K + L
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 491 MHEELVEKMVA 501
+++ LVEK+ A
Sbjct: 446 IYDLLVEKLGA 456
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 177/374 (47%), Gaps = 4/374 (1%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV 194
KL A + + M RGV T++ LI G EA+ N M + P+ V
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV 353
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
+I+++ LC+ +A + +K R PD I Y L+ G C G ++ A ++ M
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Query: 254 -KDAG-IKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAG 311
KD+ P+V +Y+ +I LC+ ++ +A D++ +++ + VT N L+ +KAG
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 312 RTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFN 371
K ++++ Q+ ++ Y +I+ C+ L A +L M + P+ +N
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533
Query: 372 SIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDEN 431
+ + K ++ A R++ +M+ N P+ +++NI++ ++ I L M
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Query: 432 QVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKM 491
+ P++ TY LI F + G+ + A +MV+ +P+ + ++VL+ G+
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDS-GFEPDAHICDSVLKYCISQGETDK 652
Query: 492 HEELVEKMVARGFV 505
ELV+K+V + V
Sbjct: 653 LTELVKKLVDKDIV 666
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
Query: 277 QITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYN 336
Q+ A VF + +D+G + A N+LM V++ E + +M + + + +
Sbjct: 53 QLKNAVSVFQQAVDSGSSL-AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 337 FLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKEL 396
L+EC+ + A VL LM+K+G A N N + + + + A + +M+
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 397 NCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNA 456
+ +P+ +YN ++R F E K ++ L+L EM + ++ T+ ILI FC+ G + A
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 457 YKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+KEM + L+ +L VY +++ G+L + L ++++ RG
Sbjct: 232 MGFLKEM-KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 139/330 (42%), Gaps = 44/330 (13%)
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVIL----YTS 232
AV F + D G + A + +++ L R R E A SF+ + E D + +
Sbjct: 57 AVSVFQQAVDSGSSL-AFAGNNLMAKLVRSRNHELAFSFY---RKMLETDTFINFVSLSG 112
Query: 233 LIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAG 292
L+ + + K A + M G NV+ ++I++ LCR + +A + EM
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 293 CNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAV 352
P+ ++N+++R + EK L++ N+MK C+ + + LI+ C+ ++EA+
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 353 KVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMF 412
L +MK + + + Y L+R F
Sbjct: 233 GFLK-----------------------------------EMKFMGLEADLVVYTSLIRGF 257
Query: 413 AESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPN 472
+ +D L E+ E P TY LI FC+ G A ++ + M+ E+ ++PN
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI-ERGVRPN 316
Query: 473 LQVYENVLELLRKAGQLKMHEELVEKMVAR 502
+ Y +++ L G+ K +L+ M+ +
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 177/393 (45%), Gaps = 1/393 (0%)
Query: 107 LAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIR 166
+ FF+WA Y +L G+ + F ++ M GV E ++ +
Sbjct: 135 VTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMD 194
Query: 167 RYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPD 226
+VR A+ F E +GV + + ++ LC + A+S F++ K D
Sbjct: 195 SFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFD 254
Query: 227 VILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFA 286
Y +I GW + G++E E++ K+M ++G P+ +YS +I+ L R G+I + ++F
Sbjct: 255 SCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFD 314
Query: 287 EMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDE 346
+ G P+A +N+++ + A ++ ++ + +M C + Y+ L+ +
Sbjct: 315 NIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGR 374
Query: 347 NLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYN 406
+ +A+++ M+ +GV P + S + + A +Y K ++ C + Y
Sbjct: 375 KVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYK 434
Query: 407 ILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEE 466
+L++ + M+L + EM E+ +V Y ++ C GH NA +M+E +
Sbjct: 435 LLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAM-R 493
Query: 467 KSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
K PN VY + L + + ++ +L K+
Sbjct: 494 KGFCPNRFVYSRLSSKLMASNKTELAYKLFLKI 526
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 126/258 (48%), Gaps = 12/258 (4%)
Query: 253 MKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPN----AVTFNSLMRVHV 308
+++ G+ +V +YS+++ +L R + DV M+ G NP+ + +S +RVH
Sbjct: 142 VREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY 201
Query: 309 KAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP-NS 367
+ +++F + + F T +N L+ C C ++ A V N KKG P +S
Sbjct: 202 ----VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDS 255
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKE 427
++N + +KL +V ++ +M E P+ L+Y+ L+ + I+ +++
Sbjct: 256 CSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDN 315
Query: 428 MDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
+ P+ N Y +I F ++ + + + M++E+ +PNL+ Y ++ L K
Sbjct: 316 IKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEEC-EPNLETYSKLVSGLIKGR 374
Query: 488 QLKMHEELVEKMVARGFV 505
++ E+ E+M++RG +
Sbjct: 375 KVSDALEIFEEMLSRGVL 392
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 129/289 (44%), Gaps = 1/289 (0%)
Query: 118 NFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEA 177
N P Y M+ KL + ++ M G ++S LI R G ++
Sbjct: 250 NIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDS 309
Query: 178 VHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHG 236
V F+ ++ G PD + ++ + R +E+ ++ + D EP++ Y+ L+ G
Sbjct: 310 VEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSG 369
Query: 237 WCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPN 296
+ K+ A EIF++M G+ P + + LC G A ++ + AGC +
Sbjct: 370 LIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRIS 429
Query: 297 AVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLN 356
+ L++ + G+ +L V+++M+ +D Y ++++ C +LE AV V+
Sbjct: 430 ESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVME 489
Query: 357 LMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTY 405
++KG PN ++ + + + A++++ K+K+ N ++
Sbjct: 490 EAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSF 538
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/395 (20%), Positives = 172/395 (43%), Gaps = 43/395 (10%)
Query: 148 SMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNR--MEDYGVAPDKVAVSIVVSSLCR 205
S+ + G+ ++ + + ++ R L+ EA+ F + + GV D + S+++ +L R
Sbjct: 107 SLSSLGIGLSIDIVADVLNR---GNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGR 163
Query: 206 KRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHT 264
++ V + PD+ T + + R + RA E+F++ + G+K + +
Sbjct: 164 RKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTES 223
Query: 265 YSIVIDSLCRCGQITRAHDVFAEMIDAGCNP-NAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
++ ++ LC ++ A VF G P ++ ++N ++ K G E++ +V +M
Sbjct: 224 FNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEM 281
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDV 383
D + Y+ LIE R + ++V++ + + KG P+++ +N++ D
Sbjct: 282 VESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDF 341
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL 443
+ + R Y +M + C PN TY+ L+ + + + L++ +EM V P
Sbjct: 342 DESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSF 401
Query: 444 ILMFCEKGH------------------WNNAYKLM----------------KEMVEEKSL 469
+ C G +AYKL+ + ++E
Sbjct: 402 LKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGY 461
Query: 470 KPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+++VYE +++ L G L+ ++E+ + +GF
Sbjct: 462 PSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGF 496
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 187/414 (45%), Gaps = 5/414 (1%)
Query: 95 GAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGV 154
G I G P ++ + FN + PS Y ++ + +HF LI ++ G+
Sbjct: 328 GLIERGRP-QEAHSIFNTLIEEGHKPSLI-TYTTLVTALTRQKHFHSLLSLISKVEKNGL 385
Query: 155 EITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQS 214
+ F+ +I +G +A+ F +M++ G P + ++ + + EE+
Sbjct: 386 KPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSR 445
Query: 215 FFDSV--KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSL 272
D + + +P+ L+ WC KIE A I M+ G+KP+V T++ + +
Sbjct: 446 LLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAY 505
Query: 273 CRCGQITRAHD-VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
R G A D + M+ PN T +++ + + G+ E+ L+ F +MK +
Sbjct: 506 ARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPN 565
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA 391
+N LI+ +++ +V++LM + GV P+ TF+++ + + D+ +Y
Sbjct: 566 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYT 625
Query: 392 KMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
M E P+ ++IL + +A + + ++ +M + V PNV Y +I +C G
Sbjct: 626 DMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAG 685
Query: 452 HWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
A ++ K+M L PNL YE ++ +A Q EEL++ M + V
Sbjct: 686 EMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVV 739
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 150/345 (43%), Gaps = 39/345 (11%)
Query: 138 HFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRM-EDYGVAPDKVAV 196
+ D A + + MK G + TA TF+ LI+ Y + G E+ + M D + P+
Sbjct: 404 NLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTC 463
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSL---------------------- 233
+I+V + C +R+ EEA + ++ +PDV+ + +L
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRML 523
Query: 234 --------------IHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQIT 279
++G+C GK+E A F MK+ G+ PN+ ++ +I +
Sbjct: 524 HNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMD 583
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
+V M + G P+ VTF++LM G ++ +++ M D ++ L
Sbjct: 584 GVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILA 643
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
+ + R E+A ++LN M K GV PN + I ++ A ++Y KM + L
Sbjct: 644 KGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGL 703
Query: 400 -PNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL 443
PN TY L+ F E+K +L K+M+ V P T +++
Sbjct: 704 SPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLI 748
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 138/279 (49%), Gaps = 9/279 (3%)
Query: 226 DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVF 285
DV T L++G G+ + A IF + + G KP++ TY+ ++ +L R +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 286 AEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRD 345
+++ G P+ + FN+++ ++G ++ +++F +MK C +N LI+ + +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 346 ENLEEAVKVLNLMVK-KGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
LEE+ ++L++M++ + + PN T N + + A + KM+ P+ +T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 405 YNILMRMFAESKSI----DMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLM 460
+N L + +A S DM++ M N+V+PNV T ++ +CE+G A +
Sbjct: 498 FNTLAKAYARIGSTCTAEDMII---PRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
Query: 461 KEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
M +E + PNL V+ ++++ + E+V+ M
Sbjct: 555 YRM-KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLM 592
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 142 AWHLIDSMK----------TRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAP 191
AW + MK G++ FS+L + Y RAG +A N+M +GV P
Sbjct: 610 AWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRP 669
Query: 192 DKVAVSIVVSSLCRKRRAEEAQSFFDSVKD--RFEPDVILYTSLIHGWCRAGKIERAEEI 249
+ V + ++S C ++A + + P++ Y +LI G+ A + +AEE+
Sbjct: 670 NVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEEL 729
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHD 283
KDM+ + P T ++ D G ++ ++D
Sbjct: 730 LKDMEGKNVVPTRKTMQLIADGWKSIG-VSNSND 762
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 162/335 (48%), Gaps = 6/335 (1%)
Query: 160 TFSVLIRRYVRAGLAA-EAVH-AFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFD 217
TF +L+ RA ++ VH N M + G+ PD+V I V SLC R +EA+
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 218 SVKDRFEP-DVILYTSLIHGWCRAGKIERAEEIFKDMKDA-GIKPNVHTYSIVIDSLCRC 275
+ ++ P D Y L+ C+ + E +M+D +KP++ +++I+ID++C
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 276 GQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGY 335
+ A + +++ +AG P+ +N++M+ + + + V+ +MK D I Y
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 336 NFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKE 395
N LI + +EEA L MV G P+++T+ S+ + + + GA + +M+
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEA 363
Query: 396 LNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNN 455
C PN TYN L+ +++ +D ++L + M + V+ N Y L+ + G
Sbjct: 364 RGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAE 423
Query: 456 AYKLMKEMVEEKSLK--PNLQVYENVLELLRKAGQ 488
AY++ V+ KSL E L+ L+KA +
Sbjct: 424 AYEVFDYAVDSKSLSDASAYSTLETTLKWLKKAKE 458
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 167/411 (40%), Gaps = 24/411 (5%)
Query: 24 KLYSSPASPQHDLIAEKFHTAIKDHHRKNPNPDAAPPSPTLTIP-------DLALEFSRL 76
K SP +P D + TA+ K P AP P+L P D F+ +
Sbjct: 19 KTTPSPPAPPRDF---RNRTAVGGDSAKLPQNTQAPREPSLRNPFKSPNLSDAKSLFNSI 75
Query: 77 SAAH--PISPSTARRVIEKCGAI---RHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLD 131
+A P+ V++ G+I + +Q + S NF ++ +L
Sbjct: 76 AATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHIL-----KSQPNFRPGRSTFLILLS 130
Query: 132 LAGKLRHFDLA--WHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGV 189
A + ++ +++ M G+E T + +R G EA + +
Sbjct: 131 HACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHS 190
Query: 190 APDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFE--PDVILYTSLIHGWCRAGKIERAE 247
PD + ++ LC+ + F D ++D F+ PD++ +T LI C + + A
Sbjct: 191 PPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM 250
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
+ + +AG KP+ Y+ ++ C + + A V+ +M + G P+ +T+N+L+
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
KAGR E+ M DT Y L+ CR A+ +L M +G APN
Sbjct: 311 SKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPND 370
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSI 418
T+N++ + K ++ +Y MK + Y L+R +S +
Sbjct: 371 CTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKV 421
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 112/225 (49%), Gaps = 11/225 (4%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A +L+ + G + ++ +++ + +EAV + +M++ GV PD++ + ++
Sbjct: 249 AMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIF 308
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
L + R EEA+ + ++ D +EPD YTSL++G CR G+ A + ++M+ G P
Sbjct: 309 GLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAP 368
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
N TY+ ++ LC+ + + +++ M +G + + +L+R VK+G+ + +VF
Sbjct: 369 NDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
+ +D Y+ LE +K L ++G+ P
Sbjct: 429 DYAVDSKSLSDASAYS----------TLETTLKWLKKAKEQGLVP 463
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 2/142 (1%)
Query: 365 PNSSTFNSIF--GCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVL 422
P STF + C A ++ HR+ M P+ +T +I +R E+ +D
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 423 KLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLEL 482
L KE+ E P+ TY L+ C+ + Y+ + EM ++ +KP+L + +++
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 483 LRKAGQLKMHEELVEKMVARGF 504
+ + L+ LV K+ GF
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGF 261
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 175/389 (44%), Gaps = 5/389 (1%)
Query: 117 KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
K F E +L L +L + AW M ++ TF+++I + G +
Sbjct: 184 KGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKK 243
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIH 235
A ME +G+ P V + +V + R E A+ +K + F+PD+ Y ++
Sbjct: 244 AKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILS 303
Query: 236 GWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNP 295
C G RA E+ ++MK+ G+ P+ +Y+I+I G + A EM+ G P
Sbjct: 304 WMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVP 360
Query: 296 NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVL 355
T+N+L+ + E + +++ D++ YN LI +C+ + ++A +
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALH 420
Query: 356 NLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAES 415
+ M+ G+ P T+ S+ + + + A ++ K+ P+ + N LM
Sbjct: 421 DEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAI 480
Query: 416 KSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQV 475
++D L KEMD + P+ TY L+ C +G + A +LM EM + + +KP+
Sbjct: 481 GNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEM-KRRGIKPDHIS 539
Query: 476 YENVLELLRKAGQLKMHEELVEKMVARGF 504
Y ++ K G K + ++M++ GF
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGF 568
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 176/368 (47%), Gaps = 15/368 (4%)
Query: 121 SSPEPYIEMLDLAGKLRH------FDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLA 174
SSP+P ++L R FD D ++T+ + F +L+R + +
Sbjct: 116 SSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTIL----FDLLVRCCCQLRMV 171
Query: 175 AEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSL 233
EA+ F M++ G P + +++ L R R E A F+ D + + +V + +
Sbjct: 172 DEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIM 231
Query: 234 IHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGC 293
I+ C+ GK+++A+ M+ GIKP + TY+ ++ G+I A + +EM G
Sbjct: 232 INVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGF 291
Query: 294 NPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVK 353
P+ T+N ++ GR +VL+ +MK D++ YN LI + +LE A
Sbjct: 292 QPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 348
Query: 354 VLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFA 413
+ MVK+G+ P T+N++ + + + A + +++E + +++TYNIL+ +
Sbjct: 349 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYC 408
Query: 414 ESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNL 473
+ L EM + ++P TY LI + C K A +L +++V K +KP+L
Sbjct: 409 QHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVV-GKGMKPDL 467
Query: 474 QVYENVLE 481
+ +++
Sbjct: 468 VMMNTLMD 475
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 159/338 (47%), Gaps = 5/338 (1%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
+I MK++G + +T++ ++ G A+E + M++ G+ PD V+ +I++
Sbjct: 282 IISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCS 338
Query: 205 RKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
E A ++ D VK P Y +LIHG KIE AE + +++++ GI +
Sbjct: 339 NNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSV 398
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
TY+I+I+ C+ G +A + EM+ G P T+ SL+ V + +T + ++F ++
Sbjct: 399 TYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV 458
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDV 383
D + N L++ HC N++ A +L M + P+ T+N + +
Sbjct: 459 VGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKF 518
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL 443
A + +MK P+ ++YN L+ +++ ++ EM P + TY L
Sbjct: 519 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNAL 578
Query: 444 ILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
+ + A +L++EM E + PN + +V+E
Sbjct: 579 LKGLSKNQEGELAEELLREMKSE-GIVPNDSSFCSVIE 615
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 147/300 (49%), Gaps = 1/300 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A ++ MK G+ + ++++LIR G A + M G+ P + ++
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
L + + E A+ ++++ D + Y LI+G+C+ G ++A + +M GI+P
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
TY+ +I LCR + A ++F +++ G P+ V N+LM H G ++ +
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+M + D + YN L+ C + EEA +++ M ++G+ P+ ++N++ +K
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
D A + +M L P LTYN L++ ++++ ++ +L +EM + PN +++
Sbjct: 551 GDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 125/237 (52%), Gaps = 1/237 (0%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
LI ++ +G+ + + T+++LI Y + G A +A + M G+ P + + ++ LC
Sbjct: 384 LIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLC 443
Query: 205 RKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
RK + EA F+ V + +PD+++ +L+ G C G ++RA + K+M I P+
Sbjct: 444 RKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDV 503
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
TY+ ++ LC G+ A ++ EM G P+ +++N+L+ + K G T+ V ++M
Sbjct: 504 TYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM 563
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ YN L++ +++ E A ++L M +G+ PN S+F S+ ++ L
Sbjct: 564 LSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 149/336 (44%), Gaps = 43/336 (12%)
Query: 208 RAEEAQSFFDSV---KDRFEP-DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
R ++ FD + DR E IL+ L+ C+ ++ A E F MK+ G P
Sbjct: 132 RKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTE 191
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
T + ++ L R +I A +A+M N TFN ++ V K G+ +K M
Sbjct: 192 TCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIM 251
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDV 383
+ F + YN L++ +E A +++ M KG P+ T+N I ++ + +
Sbjct: 252 EVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPI---LSWMCNE 308
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMD-------------- 429
A + +MKE+ +P++++YNIL+R + + ++M + EM
Sbjct: 309 GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTL 368
Query: 430 ------ENQVEP---------------NVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
EN++E + TY ILI +C+ G A+ L EM+ +
Sbjct: 369 IHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTD-G 427
Query: 469 LKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
++P Y +++ +L + + + +EL EK+V +G
Sbjct: 428 IQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 162/329 (49%), Gaps = 1/329 (0%)
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHG 236
A+ F + + G+ P K +I+++SL R ++ FD V PDV L+T+ I+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA 269
Query: 237 WCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPN 296
+C+ GK+E A ++F M++AG+ PNV T++ VID L CG+ A +M++ G P
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 297 AVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLN 356
+T++ L++ +A R V +M + + I YN LI+ +L +A+++ +
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 357 LMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESK 416
LMV KG++ SST+N++ K + A R+ +M + N ++ ++ +
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 417 SIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVY 476
D L+ EM + P LI C+ G + A +L + + K + +
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL-NKGFVVDTRTS 508
Query: 477 ENVLELLRKAGQLKMHEELVEKMVARGFV 505
+L L +AG+L + ++++ RG V
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCV 537
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 127/241 (52%), Gaps = 2/241 (0%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
+ D A+ +D M RG++ T+S+LI EA+ ++ + G+ PD
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD 255
S+++ C+ R EE Q FFD + + +P+ ++Y LI +CR+G++ A E+ +DMK
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 256 AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEK 315
GI PN TY+ +I + ++ A +F EM G PN + +L+ + K G+ K
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 316 VLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNS-IF 374
V + +M N + I Y +I + RD N+ EA ++LN M +KG+ P+S T+ I+
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793
Query: 375 G 375
G
Sbjct: 794 G 794
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 146/308 (47%), Gaps = 1/308 (0%)
Query: 152 RGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEE 211
+G + T + L+ AG EA + G D+V+ + ++S C K++ +E
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Query: 212 AQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVID 270
A F D VK +PD Y+ LI G K+E A + + D K G+ P+V+TYS++ID
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 271 SLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAA 330
C+ + + F EM+ PN V +N L+R + ++GR L++ MK +
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
Query: 331 DTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMY 390
++ Y LI+ +EEA + M +G+ PN + ++ KL + +
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 738
Query: 391 AKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEK 450
+M N PN +TY +++ +A ++ +L EM E + P+ TY+ I + ++
Sbjct: 739 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798
Query: 451 GHWNNAYK 458
G A+K
Sbjct: 799 GGVLEAFK 806
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 177/385 (45%), Gaps = 4/385 (1%)
Query: 117 KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
K FP + Y ++D + + A + D M ++G+ +T+ T++ LI+ Y + G A
Sbjct: 359 KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 418
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIH 235
A M G ++ + + V+ LC + A F + R P L T+LI
Sbjct: 419 AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLIS 478
Query: 236 GWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNP 295
G C+ GK +A E++ + G + T + ++ LC G++ A + E++ GC
Sbjct: 479 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM 538
Query: 296 NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDEN-LEEAVKV 354
+ V++N+L+ + ++ ++M + D Y+ LI C + N +EEA++
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI-CGLFNMNKVEEAIQF 597
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
+ + G+ P+ T++ + K + +M N PNT+ YN L+R +
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 415 SKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQ 474
S + M L+L+++M + PN TY LI A L +EM E L+PN+
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVF 716
Query: 475 VYENVLELLRKAGQLKMHEELVEKM 499
Y +++ K GQ+ E L+ +M
Sbjct: 717 HYTALIDGYGKLGQMVKVECLLREM 741
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/456 (21%), Positives = 197/456 (43%), Gaps = 44/456 (9%)
Query: 85 STARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWH 144
+TA K G + + + + A ++ F + ++D G +D A+
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNT-------VIDGLGMCGRYDEAFM 316
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
+ M RG+E T T+S+L++ RA +A M G P+ + + ++ S
Sbjct: 317 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 205 RKRRAEEAQSFFD-SVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
+A D V Y +LI G+C+ G+ + AE + K+M G N
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 264 TYSIV-----------------------------------IDSLCRCGQITRAHDVFAEM 288
+++ V I LC+ G+ ++A +++ +
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 289 IDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL 348
++ G + T N+L+ +AG+ ++ ++ ++ C D + YN LI C + L
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 349 EEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNIL 408
+EA L+ MVK+G+ P++ T++ + + ++ V A + + K LP+ TY+++
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 409 MRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
+ +++ + + EM V+PN Y LI +C G + A +L ++M + K
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM-KHKG 675
Query: 469 LKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+ PN Y ++++ + +++ + L E+M G
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 170/374 (45%), Gaps = 4/374 (1%)
Query: 104 YQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSV 163
Y +L F + FPS I + L + F D + +GV F+
Sbjct: 208 YLALDVFPVLANKGMFPSKTTCNILLTSLV-RANEFQKCCEAFDVV-CKGVSPDVYLFTT 265
Query: 164 LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR- 222
I + + G EAV F++ME+ GVAP+ V + V+ L R +EA F + + +R
Sbjct: 266 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG 325
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
EP +I Y+ L+ G RA +I A + K+M G PNV Y+ +IDS G + +A
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
++ M+ G + + T+N+L++ + K G+ + ++ +M + + +I
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Query: 343 CRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
C + A++ + M+ + ++P ++ + K + A ++ + + +T
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 505
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
T N L+ E+ +D +++KE+ + +Y LI C K + A+ + E
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565
Query: 463 MVEEKSLKPNLQVY 476
MV ++ LKP+ Y
Sbjct: 566 MV-KRGLKPDNYTY 578
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 4/216 (1%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y M+D K + D M ++ V+ ++ LIR Y R+G + A+ M+
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIE 244
G++P+ + ++ + R EEA+ F+ ++ + EP+V YT+LI G+ + G++
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
+ E + ++M + PN TY+++I R G +T A + EM + G P+++T+ +
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIE 340
++K G VL+ F N AA G+N LI+
Sbjct: 793 YGYLKQG---GVLEAFKGSDEENYAAIIEGWNKLIQ 825
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 162/329 (49%), Gaps = 1/329 (0%)
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHG 236
A+ F + + G+ P K +I+++SL R ++ FD V PDV L+T+ I+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA 269
Query: 237 WCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPN 296
+C+ GK+E A ++F M++AG+ PNV T++ VID L CG+ A +M++ G P
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 297 AVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLN 356
+T++ L++ +A R V +M + + I YN LI+ +L +A+++ +
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 357 LMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESK 416
LMV KG++ SST+N++ K + A R+ +M + N ++ ++ +
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 417 SIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVY 476
D L+ EM + P LI C+ G + A +L + + K + +
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL-NKGFVVDTRTS 508
Query: 477 ENVLELLRKAGQLKMHEELVEKMVARGFV 505
+L L +AG+L + ++++ RG V
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCV 537
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 127/241 (52%), Gaps = 2/241 (0%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
+ D A+ +D M RG++ T+S+LI EA+ ++ + G+ PD
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD 255
S+++ C+ R EE Q FFD + + +P+ ++Y LI +CR+G++ A E+ +DMK
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 256 AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEK 315
GI PN TY+ +I + ++ A +F EM G PN + +L+ + K G+ K
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 316 VLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNS-IF 374
V + +M N + I Y +I + RD N+ EA ++LN M +KG+ P+S T+ I+
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793
Query: 375 G 375
G
Sbjct: 794 G 794
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 146/308 (47%), Gaps = 1/308 (0%)
Query: 152 RGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEE 211
+G + T + L+ AG EA + G D+V+ + ++S C K++ +E
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Query: 212 AQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVID 270
A F D VK +PD Y+ LI G K+E A + + D K G+ P+V+TYS++ID
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 271 SLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAA 330
C+ + + F EM+ PN V +N L+R + ++GR L++ MK +
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
Query: 331 DTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMY 390
++ Y LI+ +EEA + M +G+ PN + ++ KL + +
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 738
Query: 391 AKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEK 450
+M N PN +TY +++ +A ++ +L EM E + P+ TY+ I + ++
Sbjct: 739 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798
Query: 451 GHWNNAYK 458
G A+K
Sbjct: 799 GGVLEAFK 806
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 177/385 (45%), Gaps = 4/385 (1%)
Query: 117 KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
K FP + Y ++D + + A + D M ++G+ +T+ T++ LI+ Y + G A
Sbjct: 359 KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 418
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIH 235
A M G ++ + + V+ LC + A F + R P L T+LI
Sbjct: 419 AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLIS 478
Query: 236 GWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNP 295
G C+ GK +A E++ + G + T + ++ LC G++ A + E++ GC
Sbjct: 479 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM 538
Query: 296 NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDEN-LEEAVKV 354
+ V++N+L+ + ++ ++M + D Y+ LI C + N +EEA++
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI-CGLFNMNKVEEAIQF 597
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
+ + G+ P+ T++ + K + +M N PNT+ YN L+R +
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 415 SKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQ 474
S + M L+L+++M + PN TY LI A L +EM E L+PN+
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVF 716
Query: 475 VYENVLELLRKAGQLKMHEELVEKM 499
Y +++ K GQ+ E L+ +M
Sbjct: 717 HYTALIDGYGKLGQMVKVECLLREM 741
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/456 (21%), Positives = 197/456 (43%), Gaps = 44/456 (9%)
Query: 85 STARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWH 144
+TA K G + + + + A ++ F + ++D G +D A+
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNT-------VIDGLGMCGRYDEAFM 316
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
+ M RG+E T T+S+L++ RA +A M G P+ + + ++ S
Sbjct: 317 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 205 RKRRAEEAQSFFD-SVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
+A D V Y +LI G+C+ G+ + AE + K+M G N
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 264 TYSIV-----------------------------------IDSLCRCGQITRAHDVFAEM 288
+++ V I LC+ G+ ++A +++ +
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 289 IDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL 348
++ G + T N+L+ +AG+ ++ ++ ++ C D + YN LI C + L
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 349 EEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNIL 408
+EA L+ MVK+G+ P++ T++ + + ++ V A + + K LP+ TY+++
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 409 MRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
+ +++ + + EM V+PN Y LI +C G + A +L ++M + K
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM-KHKG 675
Query: 469 LKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+ PN Y ++++ + +++ + L E+M G
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 170/374 (45%), Gaps = 4/374 (1%)
Query: 104 YQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSV 163
Y +L F + FPS I + L + F D + +GV F+
Sbjct: 208 YLALDVFPVLANKGMFPSKTTCNILLTSLV-RANEFQKCCEAFDVV-CKGVSPDVYLFTT 265
Query: 164 LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR- 222
I + + G EAV F++ME+ GVAP+ V + V+ L R +EA F + + +R
Sbjct: 266 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG 325
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
EP +I Y+ L+ G RA +I A + K+M G PNV Y+ +IDS G + +A
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
++ M+ G + + T+N+L++ + K G+ + ++ +M + + +I
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Query: 343 CRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
C + A++ + M+ + ++P ++ + K + A ++ + + +T
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 505
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
T N L+ E+ +D +++KE+ + +Y LI C K + A+ + E
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565
Query: 463 MVEEKSLKPNLQVY 476
MV ++ LKP+ Y
Sbjct: 566 MV-KRGLKPDNYTY 578
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 4/216 (1%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y M+D K + D M ++ V+ ++ LIR Y R+G + A+ M+
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIE 244
G++P+ + ++ + R EEA+ F+ ++ + EP+V YT+LI G+ + G++
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
+ E + ++M + PN TY+++I R G +T A + EM + G P+++T+ +
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIE 340
++K G VL+ F N AA G+N LI+
Sbjct: 793 YGYLKQG---GVLEAFKGSDEENYAAIIEGWNKLIQ 825
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 183/372 (49%), Gaps = 14/372 (3%)
Query: 138 HFDLAWHLIDSMKTRGVEITAETF--SVLIRRYVRAGLAAEAVHAFNRMEDYGV-APDKV 194
D A +++ M + V + F S +I + + G A+ F D GV P+ V
Sbjct: 149 EMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLV 208
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
+ +VS+LC+ + +E + ++D FE D + Y++ IHG+ + G + A ++M
Sbjct: 209 TYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREM 268
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRT 313
+ G+ +V +YSI+ID L + G + A + +MI G PN +T+ +++R K G+
Sbjct: 269 VEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKL 328
Query: 314 EKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
E+ +FN++ D Y LI+ CR NL A +L M ++G+ P+ T+N++
Sbjct: 329 EEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTV 388
Query: 374 FGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQV 433
+ V+ A + + + + +TY+ L+ + + ++ID VL++++ E ++
Sbjct: 389 INGLCMAGRVSEADEVSKGV-----VGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKI 443
Query: 434 EPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQ----L 489
++ IL+ F G + A L + M E L P+ Y +++ K GQ L
Sbjct: 444 PMDLVMCNILLKAFLLMGAYGEADALYRAM-PEMDLTPDTATYATMIKGYCKTGQIEEAL 502
Query: 490 KMHEELVEKMVA 501
+M EL + V+
Sbjct: 503 EMFNELRKSSVS 514
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 154/341 (45%), Gaps = 10/341 (2%)
Query: 125 PYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRM 184
Y ++D K + + A L+ M GVE T++ +IR + G EA FNR+
Sbjct: 279 SYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRI 338
Query: 185 EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKI 243
G+ D+ ++ +CRK A S ++ R +P ++ Y ++I+G C AG++
Sbjct: 339 LSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRV 398
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
A+E+ K G+ +V TYS ++DS + I ++ ++A + V N L
Sbjct: 399 SEADEVSK-----GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNIL 453
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
++ + G + ++ M + DT Y +I+ +C+ +EEA+++ N + K V
Sbjct: 454 LKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSV 513
Query: 364 APNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLK 423
+ + +N I + K ++ A + ++ E + T L+ + +L
Sbjct: 514 SA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILG 572
Query: 424 LKKEMDENQVEPNVNTYRILILMFCEKGHWNNA---YKLMK 461
L +++ + + IL+ C++G + A Y +M+
Sbjct: 573 LVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMR 613
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/416 (20%), Positives = 166/416 (39%), Gaps = 86/416 (20%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV 219
T++ +I+ Y + G EA+ FN + V+ V + ++ +LC+K + A +
Sbjct: 484 TYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIEL 542
Query: 220 KDR-FEPDVILYTSLIHG-----------------------------------WCRAGKI 243
++ D+ +L+H C+ G
Sbjct: 543 WEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSF 602
Query: 244 ERAEEIFKDMKDAGIKP----------------------------------NVHTYSIVI 269
E A E++ M+ G+ +V Y+I+I
Sbjct: 603 EAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIII 662
Query: 270 DSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCA 329
+ LC+ G + +A ++ + G N +T+NSL+ + G + L++F+ ++
Sbjct: 663 NGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLV 722
Query: 330 ADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRM 389
+ Y LI+ C++ +A K+L+ MV KG+ PN +NSI KL A R+
Sbjct: 723 PSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRV 782
Query: 390 YAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCE 449
++ P+ T + +++ + + ++ L + E + + + + LI FC
Sbjct: 783 VSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCT 842
Query: 450 KGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
KG A L++EM+ V E+V++L+ ++ EL E RGF+
Sbjct: 843 KGRMEEARGLLREML----------VSESVVKLIN-----RVDAELAESESIRGFL 883
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 125/273 (45%), Gaps = 25/273 (9%)
Query: 192 DKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIF 250
D + +I+++ LC++ +A + K R + I Y SLI+G C+ G + A +F
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 251 KDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKA 310
+++ G+ P+ TY I+ID+LC+ G A + M+ G PN + +NS++ + K
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 311 GRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
G+TE ++V ++ D + +I+ +C+ ++EEA+ V K ++ +
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD---- 829
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE 430
FG + + RM +L M + ++ ++ E+ E
Sbjct: 830 --FFGFLFLIKGFCTKGRMEE------------ARGLLREMLVSESVVKLINRVDAELAE 875
Query: 431 NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
++ + R ++ CE+G A K++ E+
Sbjct: 876 SE------SIRGFLVELCEQGRVPQAIKILDEI 902
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 160/379 (42%), Gaps = 77/379 (20%)
Query: 162 SVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD 221
++L++ ++ G EA + M + + PD + ++ C+ + EEA F+ ++
Sbjct: 451 NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK 510
Query: 222 RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDS---------- 271
+ Y +I C+ G ++ A E+ ++ + G+ ++HT ++ S
Sbjct: 511 SSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGI 570
Query: 272 -------------------------LCRCGQITRAHDVFAEMIDAGCNPNAVTF-NSLMR 305
LC+ G A +V+ M G VTF +++++
Sbjct: 571 LGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGL---TVTFPSTILK 627
Query: 306 VHVKAGRT-EKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
V R+ + L V N + + D I Y +I C++ L +A+ + + +GV
Sbjct: 628 TLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVT 687
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
N+ T+NS+ +NG + + CL L R+F ++I +V
Sbjct: 688 LNTITYNSL---------ING-------LCQQGCLVEAL------RLFDSLENIGLV--- 722
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
P+ TY ILI C++G + +A KL+ MV K L PN+ +Y ++++
Sbjct: 723 ----------PSEVTYGILIDNLCKEGLFLDAEKLLDSMV-SKGLVPNIIIYNSIVDGYC 771
Query: 485 KAGQLKMHEELVE-KMVAR 502
K GQ + +V KM+ R
Sbjct: 772 KLGQTEDAMRVVSRKMMGR 790
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 115 SLKNFPSSPE--PYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAG 172
SL+N P Y ++D K F A L+DSM ++G+ ++ ++ Y + G
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 173 LAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYT 231
+A+ +R V PD VS ++ C+K EEA S F KD+ D +
Sbjct: 775 QTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFL 834
Query: 232 SLIHGWCRAGKIERAEEIFKDM------------KDAGIKPNVHTYSIVIDSLCRCGQIT 279
LI G+C G++E A + ++M DA + + +++ LC G++
Sbjct: 835 FLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVE-LCEQGRVP 893
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
+A + E I + P+ S R+
Sbjct: 894 QAIKILDE-ISSTIYPSGKNLGSYQRLQ 920
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 130/289 (44%), Gaps = 23/289 (7%)
Query: 229 LYTSLIHGWCRAGKIERAEEIFK-DMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAE 287
+Y+ + + + E AE+ + A I P H ++DSL ITR
Sbjct: 63 IYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTH----MLDSLIHGFSITRDDPSKGL 118
Query: 288 MI------DAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM--KRFNCAADTIGYNFLI 339
+I + G P+++TF SL+ V+ G + ++V M K N D + +I
Sbjct: 119 LILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVI 178
Query: 340 ECHCRDENLEEAVKVLNLMVKKGV-APNSSTFNSIFGCIAKLHDVNGAHRMYAKMK---- 394
C+ E A+ V GV PN T+ ++ + +L V+ + +++
Sbjct: 179 SGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGF 238
Query: 395 ELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWN 454
E +C+ + N + F +D +++ +EM E + +V +Y ILI ++G+
Sbjct: 239 EFDCVFYS---NWIHGYFKGGALVDALMQ-DREMVEKGMNRDVVSYSILIDGLSKEGNVE 294
Query: 455 NAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
A L+ +M++E ++PNL Y ++ L K G+L+ L ++++ G
Sbjct: 295 EALGLLGKMIKE-GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVG 342
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 148 SMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKR 207
M+ +G+E TF++++ + G + + +++M+ G+ P ++ +IVV LC
Sbjct: 563 GMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENG 622
Query: 208 RAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKD---MKDAGIKPNVH 263
+ EEA + + P++ Y + + K +RA+ IFK + GIK +
Sbjct: 623 KMEEAIHILNQMMLMEIHPNLTTYRIFLD---TSSKHKRADAIFKTHETLLSYGIKLSRQ 679
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
Y+ +I +LC+ G +A V +M G P+ VTFNSLM + K L ++ M
Sbjct: 680 VYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVM 739
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDV 383
+ + YN +I ++E K L+ M +G+ P+ T+N++ AK+ ++
Sbjct: 740 MEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNM 799
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL 443
G+ +Y +M +P T TYN+L+ FA + +L KEM + V PN +TY +
Sbjct: 800 KGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTM 859
Query: 444 ILMFCE-----KGHWNN-------AYKLMKEMVEEKSLKP-NLQVY 476
I C+ WN A L+KEMVEEK P N +Y
Sbjct: 860 ISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIY 905
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 183/388 (47%), Gaps = 34/388 (8%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVH-AFNRMEDYGVAPDKVAVSIVV 200
A + +M T GV + ++ LI ++ GL + V +++M GV+PD A+++++
Sbjct: 77 AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI 136
Query: 201 SSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIK 259
S C+ R A S +++R D + Y ++I G C G + A + +M GI
Sbjct: 137 HSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGIL 193
Query: 260 PNVHTYSIVIDSLCRCGQITRA----------------------------HDVFAEMIDA 291
P+ +Y+ +ID C+ G RA + + +M+ +
Sbjct: 194 PDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMS 253
Query: 292 GCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEA 351
G +P+ VTF+S++ K G+ + + +M+ + + + Y L++ + A
Sbjct: 254 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313
Query: 352 VKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRM 411
+ + + MV +G+ + + + + K D+ A + + + E N +PN +TY L+
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 373
Query: 412 FAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKP 471
++ + + +M E V PNV TY +I + +KG A L+++M E++++ P
Sbjct: 374 LCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM-EDQNVVP 432
Query: 472 NLQVYENVLELLRKAGQLKMHEELVEKM 499
N Y V++ L KAG+ +M EL ++M
Sbjct: 433 NGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 172/376 (45%), Gaps = 7/376 (1%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D K + A L M RG+ + ++VL+ +AG EA F +
Sbjct: 297 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 356
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIE 244
+ P+ V + +V LC+ A+ + ++ P+V+ Y+S+I+G+ + G +E
Sbjct: 357 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A + + M+D + PN TY VID L + G+ A ++ EM G N ++L+
Sbjct: 417 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALV 476
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
+ GR ++V + M D I Y LI+ + + E A+ M ++G+
Sbjct: 477 NHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMP 536
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
+ ++N + + K V GA Y M+E P+ T+NI+M + + +LKL
Sbjct: 537 WDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKL 595
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELL- 483
+M ++P++ + I++ M CE G A ++ +M+ + + PNL Y L+
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME-IHPNLTTYRIFLDTSS 654
Query: 484 ---RKAGQLKMHEELV 496
R K HE L+
Sbjct: 655 KHKRADAIFKTHETLL 670
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 171/388 (44%), Gaps = 30/388 (7%)
Query: 146 IDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCR 205
I ++ R + I T++ +I GLA EA + M G+ PD V+ + ++ C+
Sbjct: 149 ISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCK 208
Query: 206 KRRAEEAQSFFDSVKD-----------------------------RFEPDVILYTSLIHG 236
A++ D + + F+PDV+ ++S+I+
Sbjct: 209 VGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINR 268
Query: 237 WCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPN 296
C+ GK+ + ++M++ + PN TY+ ++DSL + A ++++M+ G +
Sbjct: 269 LCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVD 328
Query: 297 AVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLN 356
V + LM KAG + + F + N + + Y L++ C+ +L A ++
Sbjct: 329 LVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIIT 388
Query: 357 LMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESK 416
M++K V PN T++S+ K + A + KM++ N +PN TY ++ ++
Sbjct: 389 QMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAG 448
Query: 417 SIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVY 476
+M ++L KEM VE N L+ G L+K+MV K + + Y
Sbjct: 449 KEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMV-SKGVTLDQINY 507
Query: 477 ENVLELLRKAGQLKMHEELVEKMVARGF 504
+++++ K G + E+M RG
Sbjct: 508 TSLIDVFFKGGDEEAALAWAEEMQERGM 535
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 171/361 (47%), Gaps = 11/361 (3%)
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR 208
M G + TFS +I R + G E ME+ V P+ V + +V SL +
Sbjct: 250 MVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANI 309
Query: 209 AEEAQSFFDSVKDRFEP-DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSI 267
A + + + R P D+++YT L+ G +AG + AE+ FK + + PNV TY+
Sbjct: 310 YRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTA 369
Query: 268 VIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFN 327
++D LC+ G ++ A + +M++ PN VT++S++ +VK G E+ + + +M+ N
Sbjct: 370 LVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQN 429
Query: 328 CAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAH 387
+ Y +I+ + E A+++ M GV N+ +++ + ++ +
Sbjct: 430 VVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 489
Query: 388 RMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILI--- 444
+ M + + Y L+ +F + + L +EM E + +V +Y +LI
Sbjct: 490 GLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGM 549
Query: 445 LMFCEKG-HWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
L F + G W AYK M+ EK ++P++ + ++ RK G + +L +KM + G
Sbjct: 550 LKFGKVGADW--AYKGMR----EKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG 603
Query: 504 F 504
Sbjct: 604 I 604
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 163/380 (42%), Gaps = 36/380 (9%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++D K A +I M + V T+S +I YV+ G+ EAV +ME
Sbjct: 367 YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME 426
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIER 245
D V P+ Y ++I G +AGK E
Sbjct: 427 DQNVVPNGFT----------------------------------YGTVIDGLFKAGKEEM 452
Query: 246 AEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMR 305
A E+ K+M+ G++ N + +++ L R G+I + +M+ G + + + SL+
Sbjct: 453 AIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Query: 306 VHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
V K G E L +M+ D + YN LI + + A M +KG+ P
Sbjct: 513 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEP 571
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLK 425
+ +TFN + K D G +++ KMK P+ ++ NI++ M E+ ++ + +
Sbjct: 572 DIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHIL 631
Query: 426 KEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRK 485
+M ++ PN+ TYRI + + + +K E + +K + QVY ++ L K
Sbjct: 632 NQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFK-THETLLSYGIKLSRQVYNTLIATLCK 690
Query: 486 AGQLKMHEELVEKMVARGFV 505
G K ++ M ARGF+
Sbjct: 691 LGMTKKAAMVMGDMEARGFI 710
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 150/347 (43%), Gaps = 26/347 (7%)
Query: 127 IEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMED 186
+ ML GK+ A H+++ M + T+ + + + A +
Sbjct: 615 VGMLCENGKMEE---AIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLS 671
Query: 187 YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIER 245
YG+ + + ++++LC+ ++A ++ R F PD + + SL+HG+ + +
Sbjct: 672 YGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRK 731
Query: 246 AEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMR 305
A + M +AGI PNV TY+ +I L G I +EM G P+ T+N+L+
Sbjct: 732 ALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALIS 791
Query: 306 VHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
K G + + ++ +M T YN LI + +A ++L M K+GV+P
Sbjct: 792 GQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSP 851
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLK 425
N+ST+ ++ + KL C + +N AE+K + LK
Sbjct: 852 NTSTYCTMISGLCKL-----------------CTHPDVEWNKKAMYLAEAKGL-----LK 889
Query: 426 KEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPN 472
+ ++E P T + F + G +A + +KE ++K+ + +
Sbjct: 890 EMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLKECYKKKNARSS 936
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 122 SPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAF 181
S + Y ++ KL A ++ M+ RG TF+ L+ Y +A+ +
Sbjct: 677 SRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTY 736
Query: 182 NRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRA 240
+ M + G++P+ + ++ L +E + +K R PD Y +LI G +
Sbjct: 737 SVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKI 796
Query: 241 GKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTF 300
G ++ + I+ +M G+ P TY+++I G++ +A ++ EM G +PN T+
Sbjct: 797 GNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTY 856
Query: 301 NSLM 304
+++
Sbjct: 857 CTMI 860
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 9/168 (5%)
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI---FGCIAKLHDVNGAHRMYA 391
++ L + E L A + L+ M GV P+S +NS+ F +HD +Y+
Sbjct: 61 FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHD--QVSLIYS 118
Query: 392 KMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
KM P+ N+L+ F + + + L + + + TY +I CE G
Sbjct: 119 KMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHG 175
Query: 452 HWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
+ AY+ + EMV+ L P+ Y +++ K G + LV+++
Sbjct: 176 LADEAYQFLSEMVKMGIL-PDTVSYNTLIDGFCKVGNFVRAKALVDEI 222
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 172/354 (48%), Gaps = 3/354 (0%)
Query: 138 HFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVS 197
F+LA + MK G + T+S I + + ME G PD A +
Sbjct: 59 RFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFN 118
Query: 198 IVVSSLCRKRRAEEA-QSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDA 256
+ + LCR+ + A Q+FF V+ EPDV+ YT LI+G RAGK+ A EI+ M +
Sbjct: 119 VYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRS 178
Query: 257 GIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMI-DAGCNPNAVTFNSLMRVHVKAGRTEK 315
G+ P+ + ++ LC ++ A+++ AE I A + V +N+L+ KAGR EK
Sbjct: 179 GVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEK 238
Query: 316 VLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFG 375
+ + M + C D + YN L+ + + L+ A V+ MV+ G+ ++ ++N +
Sbjct: 239 AEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLK 298
Query: 376 CIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEP 435
++ + + K E + ++Y+ L+ F + + +L +EM + +
Sbjct: 299 RHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVM 358
Query: 436 NVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQL 489
NV TY LI F +G+ + A KL+ +M E L P+ Y +L+ L K+G +
Sbjct: 359 NVVTYTSLIKAFLREGNSSVAKKLLDQMT-ELGLSPDRIFYTTILDHLCKSGNV 411
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 171/372 (45%), Gaps = 38/372 (10%)
Query: 130 LDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGV 189
LDL + A M RG E ++++LI RAG +AV +N M GV
Sbjct: 121 LDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGV 180
Query: 190 APDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKD-RFEPDVILYTSLIHGWCRAGKIERAE 247
+PD A + +V LC R+ + A + +K R + ++Y +LI G+C+AG+IE+AE
Sbjct: 181 SPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAE 240
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
+ M G +P++ TY+++++ + RA V AEM+ +G +A ++N L++ H
Sbjct: 241 ALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRH 300
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
+ +K + D + Y+ LIE CR N +A
Sbjct: 301 CRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKA---------------- 344
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKE 427
+R++ +M++ + N +TY L++ F + + KL +
Sbjct: 345 -------------------YRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQ 385
Query: 428 MDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
M E + P+ Y ++ C+ G+ + AY + +M+E + + P+ Y +++ L ++G
Sbjct: 386 MTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHE-ITPDAISYNSLISGLCRSG 444
Query: 488 QLKMHEELVEKM 499
++ +L E M
Sbjct: 445 RVTEAIKLFEDM 456
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 115/216 (53%), Gaps = 3/216 (1%)
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVH-AFNRMEDYGVAPDKVAVSIVVSSLCRKR 207
M G+++ A +++ L++R+ R + + ME G D V+ S ++ + CR
Sbjct: 281 MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRAS 339
Query: 208 RAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYS 266
+A F+ ++ + +V+ YTSLI + R G A+++ M + G+ P+ Y+
Sbjct: 340 NTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 267 IVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF 326
++D LC+ G + +A+ VF +MI+ P+A+++NSL+ ++GR + +++F MK
Sbjct: 400 TILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Query: 327 NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKG 362
C D + + F+I R + L A KV + M+ KG
Sbjct: 460 ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG 495
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 121/251 (48%), Gaps = 7/251 (2%)
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR 208
M G E T++VL+ Y + A M G+ D + + ++ CR
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 209 AEEAQSFFDSVKDRFEP----DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHT 264
++ +F VK+ EP DV+ Y++LI +CRA +A +F++M+ G+ NV T
Sbjct: 306 PDKCYNFM--VKE-MEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVT 362
Query: 265 YSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMK 324
Y+ +I + R G + A + +M + G +P+ + + +++ K+G +K VFN M
Sbjct: 363 YTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMI 422
Query: 325 RFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVN 384
D I YN LI CR + EA+K+ M K P+ TF I G + + ++
Sbjct: 423 EHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLS 482
Query: 385 GAHRMYAKMKE 395
A++++ +M +
Sbjct: 483 AAYKVWDQMMD 493
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 125 PYIEMLDLAGKLRHFDLAWH-LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNR 183
Y ++L ++ H D ++ ++ M+ RG ++S LI + RA +A F
Sbjct: 292 SYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEE 350
Query: 184 MEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGK 242
M G+ + V + ++ + R+ + A+ D + + PD I YT+++ C++G
Sbjct: 351 MRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGN 410
Query: 243 IERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNS 302
+++A +F DM + I P+ +Y+ +I LCR G++T A +F +M C P+ +TF
Sbjct: 411 VDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKF 470
Query: 303 LMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
++ ++ + +V++QM D + LI+ C
Sbjct: 471 IIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 125/277 (45%), Gaps = 3/277 (1%)
Query: 230 YTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMI 289
Y I R + E AE I+ DMK G TYS I LC+ + + ++M
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 290 DAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLE 349
G P+ FN + + + + +Q F M + D + Y LI R +
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 350 EAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA-KMKELNCLPNTLTYNIL 408
+AV++ N M++ GV+P++ ++ + V+ A+ M A ++K +T+ YN L
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNAL 226
Query: 409 MRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
+ F ++ I+ LK M + EP++ TY +L+ + + A +M EMV
Sbjct: 227 ISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS-G 285
Query: 469 LKPNLQVYENVLEL-LRKAGQLKMHEELVEKMVARGF 504
++ + Y +L+ R + K + +V++M RGF
Sbjct: 286 IQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF 322
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 99/235 (42%)
Query: 269 IDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNC 328
I +L + G I A VF EM + + +N + V V+ R E ++ MK
Sbjct: 16 IANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGF 75
Query: 329 AADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHR 388
+ Y+ I C+ + + +L+ M G P+ FN + + + V A +
Sbjct: 76 SLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQ 135
Query: 389 MYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFC 448
+ M + P+ ++Y IL+ + + +++ M + V P+ L++ C
Sbjct: 136 TFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLC 195
Query: 449 EKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+ AY+++ E ++ +K + VY ++ KAG+++ E L M G
Sbjct: 196 HARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIG 250
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 183/384 (47%), Gaps = 6/384 (1%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y M+ G++ D A L + M T G+ + ++ L++ + + +A+ F+RM
Sbjct: 273 YTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMV 332
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIER 245
+ G P++ S++++ L + + + + R+ I Y+ L+ + G +
Sbjct: 333 ETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE-ISKRYMTQGI-YSYLVRTLSKLGHVSE 390
Query: 246 AEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMR 305
A +F DM +K +Y +++SLC G+ A ++ +++ + G + + +N++
Sbjct: 391 AHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFS 450
Query: 306 VHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
K + + +F +MK+ + D YN LI R ++EA+ + + + P
Sbjct: 451 ALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKP 510
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLK 425
+ ++NS+ C+ K DV+ AH + +M+E P+ +TY+ LM F +++ ++M L
Sbjct: 511 DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLF 570
Query: 426 KEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRK 485
+EM +PN+ TY IL+ + G A L +M +++ L P+ Y VLE L+
Sbjct: 571 EEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM-KQQGLTPDSITY-TVLERLQS 628
Query: 486 AGQLKMHEELVEKMVARGFVSRPL 509
K + K G+V PL
Sbjct: 629 VSHGK--SRIRRKNPITGWVVSPL 650
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 186/442 (42%), Gaps = 56/442 (12%)
Query: 106 SLAFFNWATSL----KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETF 161
++ FF SL +N P I +L + FD ++DSM V T
Sbjct: 115 AVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTV 174
Query: 162 SVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK- 220
++LI + G + ++ + + + ++ + R R +A + ++
Sbjct: 175 NILIGFF---GNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRR 231
Query: 221 DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITR 280
+ D+ Y L+ K E+A ++F+DMK + + +TY+I+I ++ R G+
Sbjct: 232 GGHKLDIFAYNMLLDAL---AKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDE 288
Query: 281 AHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIE 340
A +F EMI G N V +N+LM+V K +K +QVF++M C + Y+ L+
Sbjct: 289 AVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLN 348
Query: 341 CHCRDEN---LEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMY------- 390
+ L+ V++ + +G+ ++ + ++KL V+ AHR++
Sbjct: 349 LLVAEGQLVRLDGVVEISKRYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFP 402
Query: 391 ----------------------------AKMKELNCLPNTLTYNILMRMFAESKSIDMVL 422
+K+ E + +T+ YN + + K I +
Sbjct: 403 VKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIH 462
Query: 423 KLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLEL 482
L ++M ++ P++ TY ILI F G + A + +E+ E KP++ Y +++
Sbjct: 463 DLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL-ERSDCKPDIISYNSLINC 521
Query: 483 LRKAGQLKMHEELVEKMVARGF 504
L K G + ++M +G
Sbjct: 522 LGKNGDVDEAHVRFKEMQEKGL 543
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 185/382 (48%), Gaps = 2/382 (0%)
Query: 121 SSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHA 180
S+P + ++ K+R+ +L + + + G ++ T + LI ++ +
Sbjct: 162 STPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRI 221
Query: 181 FNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCR 239
+ D + P+++ + I++ LC++ R +E D + R P VI+ TSL+
Sbjct: 222 YECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLE 281
Query: 240 AGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVT 299
+IE + + K + + + YSIV+ + + G + A VF EM+ G + N+
Sbjct: 282 EMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFV 341
Query: 300 FNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMV 359
+ +RV + G ++ ++ ++M+ + +N LI R E+ ++ +MV
Sbjct: 342 YTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMV 401
Query: 360 KKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSID 419
+G+ P+ S FN + ++K+ +VN A+ + K + +P+ TY+ L+R F E ID
Sbjct: 402 TRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDID 461
Query: 420 MVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENV 479
LKL EM+ ++ P +R LI+ C G K +K M +++ ++PN +Y+ +
Sbjct: 462 QALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIM-KKRLIEPNADIYDAL 520
Query: 480 LELLRKAGQLKMHEELVEKMVA 501
++ +K G + + +M++
Sbjct: 521 IKAFQKIGDKTNADRVYNEMIS 542
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 165/340 (48%), Gaps = 3/340 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
+ +++ G+ + A H+ D M + T ++ + L+ ++ G + + ++
Sbjct: 86 FCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSID 145
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIE 244
++G PD +I++ + ++A FD VK + +P + + +LIHG C+ +++
Sbjct: 146 EFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVK 204
Query: 245 RAEEIFKDM-KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
A ++ DM K G++P VH Y+ +I +LC+ G+++ A + E + +A +++L
Sbjct: 205 EALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTL 264
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
+ +KAGR+ +V + +M C DT+ YN LI C + + E A +VL+ MV+KG+
Sbjct: 265 ISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
Query: 364 APNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLK 423
P+ ++N I G ++ A ++ M C P+TL+Y I+ E +
Sbjct: 325 KPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAV 384
Query: 424 LKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
+ EM +P + + CE G K++ +
Sbjct: 385 ILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL 424
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 2/237 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++ ++ A+ L D +++ A +S LI ++AG + E M
Sbjct: 226 YASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMS 285
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIE 244
+ G PD V +++++ C + +E A D V+ +PDVI Y ++ + R K E
Sbjct: 286 EKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWE 345
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A +F+DM G P+ +Y IV D LC Q A + EM+ G P +
Sbjct: 346 EATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFL 405
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKK 361
+ ++G+ E + +V + + R A D ++ +I C++ + +++ +L VK+
Sbjct: 406 QKLCESGKLEILSKVISSLHR-GIAGDADVWSVMIPTMCKEPVISDSIDLLLNTVKE 461
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 127/318 (39%), Gaps = 39/318 (12%)
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMK-DAGIKPNVHTYSIVIDSLCRCGQITRA 281
F ++ Y +I + + +++ +K D I P + VI+ R +RA
Sbjct: 43 FRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRA 102
Query: 282 HDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIEC 341
+F EM C + NSL+ +K G EK+ + + + F D YN LI
Sbjct: 103 LHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KPDACTYNILIHG 161
Query: 342 HCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM-KELNCLP 400
+ ++A+K+ + MVKK V P TF ++ + K V A +M M K P
Sbjct: 162 CSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRP 221
Query: 401 NTLTYNILMRMFAESKSIDMVLKLK----------------------------------- 425
Y L++ + + KLK
Sbjct: 222 TVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMIL 281
Query: 426 KEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRK 485
+EM E +P+ TY +LI FC + +A +++ EMV EK LKP++ Y +L + +
Sbjct: 282 EEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMV-EKGLKPDVISYNMILGVFFR 340
Query: 486 AGQLKMHEELVEKMVARG 503
+ + L E M RG
Sbjct: 341 IKKWEEATYLFEDMPRRG 358
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 161/354 (45%), Gaps = 2/354 (0%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
+LD KL W + G + F++L+ ++ + G ++A F+ +
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAE 247
+ P V+ + +++ C+ +E + K R PDV Y++LI+ C+ K++ A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
+F +M G+ PN ++ +I R G+I + + +M+ G P+ V +N+L+
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
K G + + M R D I Y LI+ CR ++E A+++ M + G+ +
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKE 427
F+++ + K V A R +M P+ +TY ++M F + KL KE
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510
Query: 428 MDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
M + P+V TY +L+ C+ G NA L+ M+ + P+ Y +LE
Sbjct: 511 MQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAML-NIGVVPDDITYNTLLE 563
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 121/250 (48%), Gaps = 1/250 (0%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y +++ K D A L D M RG+ F+ LI + R G ++ +M
Sbjct: 313 YSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKML 372
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIE 244
G+ PD V + +V+ C+ A++ D + R PD I YT+LI G+CR G +E
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVE 432
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A EI K+M GI+ + +S ++ +C+ G++ A EM+ AG P+ VT+ +M
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMM 492
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
K G + ++ +M+ + YN L+ C+ ++ A +L+ M+ GV
Sbjct: 493 DAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552
Query: 365 PNSSTFNSIF 374
P+ T+N++
Sbjct: 553 PDDITYNTLL 562
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 96/175 (54%), Gaps = 1/175 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A +++D M RG+ T++ LI + R G A+ M+ G+ D+V S +V
Sbjct: 399 ARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVC 458
Query: 202 SLCRKRRAEEAQ-SFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
+C++ R +A+ + + ++ +PD + YT ++ +C+ G + ++ K+M+ G P
Sbjct: 459 GMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEK 315
+V TY+++++ LC+ GQ+ A + M++ G P+ +T+N+L+ H + + K
Sbjct: 519 SVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMK 394
+N L+ C++ N+ +A KV + + K+ + P +FN++ K+ +++ R+ +M+
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 395 ELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWN 454
+ P+ TY+ L+ + +D L EM + + PN + LI GH
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI-----HGHSR 357
Query: 455 NA-YKLMKEMVEE---KSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVSRP 508
N LMKE ++ K L+P++ +Y ++ K G L +V+ M+ RG RP
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL--RP 413
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 180/381 (47%), Gaps = 5/381 (1%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y +++ K + A L++ M+ G T++ L+R G +++ R+
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 203
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRF-EPDVILYTSLIHGWCRAGKIE 244
G+AP+ S ++ + ++R +EA D + + EP+++ Y L+ G+C+ G+ +
Sbjct: 204 QKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTD 263
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A +F+++ G K NV +Y+I++ LC G+ A+ + AEM P+ VT+N L+
Sbjct: 264 DAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILI 323
Query: 305 RVHVKAGRTEKVLQVFNQMKRFN--CAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKG 362
GRTE+ LQV +M + N YN +I C++ ++ VK L+ M+ +
Sbjct: 324 NSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRR 383
Query: 363 VAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMK-ELNCLPNTLTYNILMRMFAESKSIDMV 421
PN T+N+I V A + + + C + +++ + + +
Sbjct: 384 CKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTF-AA 442
Query: 422 LKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
+L EM +P+ +TY LI C +G + A +++ M E ++ KP + + ++
Sbjct: 443 FQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMIL 502
Query: 482 LLRKAGQLKMHEELVEKMVAR 502
L K + + E+ E MV +
Sbjct: 503 GLCKIRRTDLAMEVFEMMVEK 523
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 139/280 (49%), Gaps = 1/280 (0%)
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHD 283
+P+V T L++ C+A ++++A + + M +GI P+ Y+ +++ LC+ G + A
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ 162
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
+ +M D G N VT+N+L+R G + LQ ++ + A + Y+FL+E
Sbjct: 163 LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAY 222
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
++ +EAVK+L+ ++ KG PN ++N + K + A ++ ++ N +
Sbjct: 223 KERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVV 282
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
+YNIL+R + L EMD P+V TY ILI G A +++KEM
Sbjct: 283 SYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM 342
Query: 464 VE-EKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
+ + Y V+ L K G++ + + +++M+ R
Sbjct: 343 SKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYR 382
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 176/397 (44%), Gaps = 11/397 (2%)
Query: 111 NWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVR 170
+W L + S +P + +L+ H ++S+ T G + + L+ +
Sbjct: 66 SWKPDLDSGSFSDDPRSDEPNLSDSFSH-------LESLVTGGHKPNVAHSTQLLYDLCK 118
Query: 171 AGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEP-DVIL 229
A +A+ M G+ PD A + +V+ LC++ A + ++D P + +
Sbjct: 119 ANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVT 178
Query: 230 YTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMI 289
Y +L+ G C G + ++ + + + G+ PN TYS ++++ + A + E+I
Sbjct: 179 YNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEII 238
Query: 290 DAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLE 349
G PN V++N L+ K GRT+ + +F ++ A+ + YN L+ C C D E
Sbjct: 239 VKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWE 298
Query: 350 EAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELN--CLPNTLTYNI 407
EA +L M AP+ T+N + +A A ++ +M + N +YN
Sbjct: 299 EANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNP 358
Query: 408 LMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEK 467
++ + +D+V+K EM + +PN TY + + A+ +++ + ++
Sbjct: 359 VIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQ 418
Query: 468 SLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+ Y++V+ L + G +L+ +M GF
Sbjct: 419 KCCTH-DFYKSVITSLCRKGNTFAAFQLLYEMTRCGF 454
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 170/373 (45%), Gaps = 15/373 (4%)
Query: 105 QSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVL 164
QSL F K + Y +L+ A K R D A L+D + +G E +++VL
Sbjct: 194 QSLQFVERLMQ-KGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVL 252
Query: 165 IRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK--DR 222
+ + + G +A+ F + G + V+ +I++ LC R EEA S + DR
Sbjct: 253 LTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDR 312
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAG--IKPNVHTYSIVIDSLCRCGQITR 280
P V+ Y LI+ G+ E+A ++ K+M + +Y+ VI LC+ G++
Sbjct: 313 -APSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDL 371
Query: 281 AHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM--KRFNCAADTIGYNFL 338
EMI C PN T+N++ + + ++ + + K+ C D Y +
Sbjct: 372 VVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDF--YKSV 429
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKEL-N 397
I CR N A ++L M + G P++ T++++ + GA + + M+E N
Sbjct: 430 ITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESEN 489
Query: 398 CLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAY 457
C P +N ++ + + D+ +++ + M E + PN TY IL+ E +
Sbjct: 490 CKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILV----EGIAHEDEL 545
Query: 458 KLMKEMVEEKSLK 470
+L KE+++E L+
Sbjct: 546 ELAKEVLDELRLR 558
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 5/216 (2%)
Query: 156 ITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCR-KRRAEEAQS 214
+TA +++ +I R + G V + M P++ + + SLC + +EA
Sbjct: 351 VTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYN-AIGSLCEHNSKVQEAFY 409
Query: 215 FFDSVKDRFEPDV-ILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLC 273
S+ ++ + Y S+I CR G A ++ +M G P+ HTYS +I LC
Sbjct: 410 IIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLC 469
Query: 274 RCGQITRAHDVFAEMIDA-GCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADT 332
G T A +V + M ++ C P FN+++ K RT+ ++VF M +
Sbjct: 470 LEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNE 529
Query: 333 IGYNFLIECHCRDENLEEAVKVLN-LMVKKGVAPNS 367
Y L+E ++ LE A +VL+ L ++K + N+
Sbjct: 530 TTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNA 565
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 170/352 (48%), Gaps = 6/352 (1%)
Query: 157 TAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSI----VVSSLCRKRRAEEA 212
T +T+++LI+ Y AGL A M+++ V+P + V++ + + RK EEA
Sbjct: 211 TEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEA 270
Query: 213 QSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDS 271
F +K DR +P Y +I+ + +A K + +++ +M+ KPN+ TY+ ++++
Sbjct: 271 IDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNA 330
Query: 272 LCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
R G +A ++F ++ + G P+ +N+LM + +AG ++F+ M+ C D
Sbjct: 331 FAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPD 390
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA 391
YN +++ + R +A V M + G+AP + + +K DV +
Sbjct: 391 RASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVK 450
Query: 392 KMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
+M E P+T N ++ ++ + K+ EM+ +++TY ILI ++ + G
Sbjct: 451 EMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAG 510
Query: 452 HWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+L E+ +EK+ +P++ + + + + E+ E+M+ G
Sbjct: 511 FLERIEELFVEL-KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 159/358 (44%), Gaps = 43/358 (12%)
Query: 191 PDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAE-- 247
PD + ++++ + +K + +EA+S + ++ R+ P Y LI +C AG IERAE
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 248 -------------------------------------EIFKDMKDAGIKPNVHTYSIVID 270
++F+ MK KP TY+++I+
Sbjct: 235 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 294
Query: 271 SLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAA 330
+ + + ++ EM C PN T+ +L+ + G EK ++F Q++
Sbjct: 295 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 354
Query: 331 DTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMY 390
D YN L+E + R A ++ +LM G P+ +++N + + + A ++
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 414
Query: 391 AKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEK 450
+MK L P ++ +L+ +++++ + + KEM EN VEP+ ++ ++
Sbjct: 415 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 474
Query: 451 GHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVSRP 508
G + K++ EM E ++ Y ++ + KAG L+ EEL ++ + F RP
Sbjct: 475 GQFTKMEKILAEM-ENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF--RP 529
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 145/308 (47%), Gaps = 1/308 (0%)
Query: 122 SPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAF 181
+ E Y M++L GK ++W L M++ + T++ L+ + R GL +A F
Sbjct: 285 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 344
Query: 182 NRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRA 240
++++ G+ PD + ++ S R A F ++ EPD Y ++ + RA
Sbjct: 345 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 404
Query: 241 GKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTF 300
G AE +F++MK GI P + ++ +++ + + +T+ + EM + G P+
Sbjct: 405 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 464
Query: 301 NSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVK 360
NS++ ++ + G+ K+ ++ +M+ C AD YN LI + + LE ++ + +
Sbjct: 465 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 524
Query: 361 KGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDM 420
K P+ T+ S G ++ ++ +M + C P+ T +L+ + + ++
Sbjct: 525 KNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQ 584
Query: 421 VLKLKKEM 428
V + + M
Sbjct: 585 VTSVLRTM 592
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 141/304 (46%), Gaps = 1/304 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A + MK + T ET++++I Y +A + + + M + P+ + +V+
Sbjct: 270 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 329
Query: 202 SLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
+ R+ E+A+ F+ ++ D EPDV +Y +L+ + RAG A EIF M+ G +P
Sbjct: 330 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 389
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+ +Y+I++D+ R G + A VF EM G P + L+ + KA K +
Sbjct: 390 DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIV 449
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+M DT N ++ + R + K+L M + ST+N + K
Sbjct: 450 KEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKA 509
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
+ ++ ++KE N P+ +T+ + ++ K L++ +EM ++ P+ T
Sbjct: 510 GFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTA 569
Query: 441 RILI 444
++L+
Sbjct: 570 KVLL 573
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 139/319 (43%), Gaps = 40/319 (12%)
Query: 220 KDRFEPDVIL-----------------------------------YTSLIHGWCRAGKIE 244
K F+PDVI Y LI +C AG IE
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 229
Query: 245 RAEEIFKDMKDAGIKP---NVHTYSIVIDSLC-RCGQITRAHDVFAEMIDAGCNPNAVTF 300
RAE + +M++ + P V Y+ I+ L R G A DVF M C P T+
Sbjct: 230 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 289
Query: 301 NSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVK 360
N ++ ++ KA ++ +++ +M+ C + Y L+ R+ E+A ++ + +
Sbjct: 290 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 349
Query: 361 KGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDM 420
G+ P+ +N++ ++ GA +++ M+ + C P+ +YNI++ + +
Sbjct: 350 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 409
Query: 421 VLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVL 480
+ +EM + P + ++ +L+ + + ++KEM E ++P+ V ++L
Sbjct: 410 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM-SENGVEPDTFVLNSML 468
Query: 481 ELLRKAGQLKMHEELVEKM 499
L + GQ E+++ +M
Sbjct: 469 NLYGRLGQFTKMEKILAEM 487
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 121/255 (47%), Gaps = 5/255 (1%)
Query: 253 MKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGR 312
++ + +P+V ++++ID+ + Q A ++ +++++ P T+ L++ + AG
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 313 TEKVLQVFNQMKRFNCAADTIG---YNFLIECHC-RDENLEEAVKVLNLMVKKGVAPNSS 368
E+ V +M+ + + TIG YN IE R N EEA+ V M + P +
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 369 TFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEM 428
T+N + K + ++Y +M+ C PN TY L+ FA + ++ +++
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 429 DENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQ 488
E+ +EP+V Y L+ + G+ A ++ +++ +P+ Y +++ +AG
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS-LMQHMGCEPDRASYNIMVDAYGRAGL 406
Query: 489 LKMHEELVEKMVARG 503
E + E+M G
Sbjct: 407 HSDAEAVFEEMKRLG 421
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 192/417 (46%), Gaps = 54/417 (12%)
Query: 106 SLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTR------------- 152
S +FF W SL + S + +M+ + K +HF A L+D + R
Sbjct: 63 SWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLV 122
Query: 153 -GV----EITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKR 207
GV E + FS L+ Y +AG+ +++ F ++ G+ P A +++++SL ++R
Sbjct: 123 GGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQR 182
Query: 208 RAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSI 267
D+V W +IFK M G+ N+H Y++
Sbjct: 183 -------LTDTV-----------------W----------KIFKKMVKLGVVANIHVYNV 208
Query: 268 VIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFN 327
++ + + G +A + +EM + G P+ T+N+L+ V+ K + L V ++M+R
Sbjct: 209 LVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG 268
Query: 328 CAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAH 387
A + + YN I R+ + EA ++ +K V N T+ ++ +++D++ A
Sbjct: 269 VAPNIVTYNSFIHGFSREGRMREATRLFR-EIKDDVTANHVTYTTLIDGYCRMNDIDEAL 327
Query: 388 RMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMF 447
R+ M+ P +TYN ++R E I +L EM ++EP+ T LI +
Sbjct: 328 RLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAY 387
Query: 448 CEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
C+ +A K+ K+M+E LK ++ Y+ ++ K +L+ +E + M+ +GF
Sbjct: 388 CKIEDMVSAVKVKKKMIES-GLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF 443
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 153/335 (45%), Gaps = 1/335 (0%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
L+ M+ +GV T++ LI Y + + EA+ +RME GVAP+ V + +
Sbjct: 225 LLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFS 284
Query: 205 RKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHT 264
R+ R EA F +KD + + YT+LI G+CR I+ A + + M+ G P V T
Sbjct: 285 REGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVT 344
Query: 265 YSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMK 324
Y+ ++ LC G+I A+ + EM P+ +T N+L+ + K ++V +M
Sbjct: 345 YNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMI 404
Query: 325 RFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVN 384
D Y LI C+ LE A + L M++KG +P +T++ + + +
Sbjct: 405 ESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQD 464
Query: 385 GAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILI 444
++ + ++ + Y L+R + + +D L + M++ + + + +
Sbjct: 465 EITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMA 524
Query: 445 LMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENV 479
+ G A L M + L NL++Y+++
Sbjct: 525 YAYWRTGKVTEASALFDVMYNRR-LMVNLKLYKSI 558
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 119/262 (45%), Gaps = 3/262 (1%)
Query: 155 EITAE--TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA 212
++TA T++ LI Y R EA+ ME G +P V + ++ LC R EA
Sbjct: 302 DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREA 361
Query: 213 QSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDS 271
+ + EPD I +LI+ +C+ + A ++ K M ++G+K ++++Y +I
Sbjct: 362 NRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHG 421
Query: 272 LCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
C+ ++ A + MI+ G +P T++ L+ + +++ ++ + ++ AD
Sbjct: 422 FCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCAD 481
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA 391
Y LI C+ E ++ A + M KKG+ +S F ++ + V A ++
Sbjct: 482 VALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFD 541
Query: 392 KMKELNCLPNTLTYNILMRMFA 413
M + N Y + +A
Sbjct: 542 VMYNRRLMVNLKLYKSISASYA 563
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 207/428 (48%), Gaps = 19/428 (4%)
Query: 71 LEFSRLSAAHPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEML 130
LE SA + S V+ +C + F L FF WA +L + S Y +
Sbjct: 47 LEKELASANVQLDSSCINEVLRRCDPNQ----FQSGLRFFIWAGTLSSHRHSAYMYTKAC 102
Query: 131 DLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVA 190
D+ DL ++I+S + + +T +++ +A LA EA+ + ++ V
Sbjct: 103 DILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVC 162
Query: 191 PDKVAVSIVVSSLCRKRRAEEAQSFF---DSVKDRFEPDVILYTSLIHGWCRAGKIERAE 247
D VA ++V+ K A D V PDVI YTS+I+G+C AGKI+ A
Sbjct: 163 ADTVAYNLVIRLFADKGDLNIADMLIKEMDCVG--LYPDVITYTSMINGYCNAGKIDDAW 220
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM--IDAG--CNPNAVTFNSL 303
+ K+M N TYS +++ +C+ G + RA ++ AEM D G +PNAVT+ +
Sbjct: 221 RLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLV 280
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR-DENLEEAVKVLNLMVKKG 362
++ + R E+ L V ++M C + + LI+ DE+++ K+++ +VK G
Sbjct: 281 IQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLG 340
Query: 363 VAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMR-MFAESKSIDMV 421
S F+S + ++ A +++ M P+ L + + R + + +D
Sbjct: 341 GVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCF 400
Query: 422 LKLKKEMDENQVEPNVNT--YRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENV 479
L L +E+++ V+ +++ + +L+L C++G+ A KL K M+++K ++ + E +
Sbjct: 401 L-LYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKK-MRLKVSHVEKI 458
Query: 480 LELLRKAG 487
+E L+K G
Sbjct: 459 IEALKKTG 466
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 4/218 (1%)
Query: 293 CNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAV 352
C N T ++ + +A ++ L V + FN ADT+ YN +I +L A
Sbjct: 126 CFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIAD 185
Query: 353 KVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMF 412
++ M G+ P+ T+ S+ ++ A R+ +M + +C+ N++TY+ ++
Sbjct: 186 MLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGV 245
Query: 413 AESKSIDMVLKLKKEMDENQ----VEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
+S ++ L+L EM++ + PN TY ++I FCEK A ++ M
Sbjct: 246 CKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGC 305
Query: 469 LKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVS 506
+ + + +L +K +L++K+V G VS
Sbjct: 306 MPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVS 343
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 170/352 (48%), Gaps = 6/352 (1%)
Query: 157 TAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSI----VVSSLCRKRRAEEA 212
T +T+++LI+ Y AGL A M+++ V+P + V++ + + RK EEA
Sbjct: 189 TEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEA 248
Query: 213 QSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDS 271
F +K DR +P Y +I+ + +A K + +++ +M+ KPN+ TY+ ++++
Sbjct: 249 IDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNA 308
Query: 272 LCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
R G +A ++F ++ + G P+ +N+LM + +AG ++F+ M+ C D
Sbjct: 309 FAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPD 368
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA 391
YN +++ + R +A V M + G+AP + + +K DV +
Sbjct: 369 RASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVK 428
Query: 392 KMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
+M E P+T N ++ ++ + K+ EM+ +++TY ILI ++ + G
Sbjct: 429 EMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAG 488
Query: 452 HWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+L E+ +EK+ +P++ + + + + E+ E+M+ G
Sbjct: 489 FLERIEELFVEL-KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 159/358 (44%), Gaps = 43/358 (12%)
Query: 191 PDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAE-- 247
PD + ++++ + +K + +EA+S + ++ R+ P Y LI +C AG IERAE
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 248 -------------------------------------EIFKDMKDAGIKPNVHTYSIVID 270
++F+ MK KP TY+++I+
Sbjct: 213 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 272
Query: 271 SLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAA 330
+ + + ++ EM C PN T+ +L+ + G EK ++F Q++
Sbjct: 273 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 332
Query: 331 DTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMY 390
D YN L+E + R A ++ +LM G P+ +++N + + + A ++
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 392
Query: 391 AKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEK 450
+MK L P ++ +L+ +++++ + + KEM EN VEP+ ++ ++
Sbjct: 393 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 452
Query: 451 GHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVSRP 508
G + K++ EM E ++ Y ++ + KAG L+ EEL ++ + F RP
Sbjct: 453 GQFTKMEKILAEM-ENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF--RP 507
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 145/308 (47%), Gaps = 1/308 (0%)
Query: 122 SPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAF 181
+ E Y M++L GK ++W L M++ + T++ L+ + R GL +A F
Sbjct: 263 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 322
Query: 182 NRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRA 240
++++ G+ PD + ++ S R A F ++ EPD Y ++ + RA
Sbjct: 323 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 382
Query: 241 GKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTF 300
G AE +F++MK GI P + ++ +++ + + +T+ + EM + G P+
Sbjct: 383 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 442
Query: 301 NSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVK 360
NS++ ++ + G+ K+ ++ +M+ C AD YN LI + + LE ++ + +
Sbjct: 443 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 502
Query: 361 KGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDM 420
K P+ T+ S G ++ ++ +M + C P+ T +L+ + + ++
Sbjct: 503 KNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQ 562
Query: 421 VLKLKKEM 428
V + + M
Sbjct: 563 VTSVLRTM 570
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 141/304 (46%), Gaps = 1/304 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A + MK + T ET++++I Y +A + + + M + P+ + +V+
Sbjct: 248 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 307
Query: 202 SLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
+ R+ E+A+ F+ ++ D EPDV +Y +L+ + RAG A EIF M+ G +P
Sbjct: 308 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 367
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+ +Y+I++D+ R G + A VF EM G P + L+ + KA K +
Sbjct: 368 DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIV 427
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+M DT N ++ + R + K+L M + ST+N + K
Sbjct: 428 KEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKA 487
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
+ ++ ++KE N P+ +T+ + ++ K L++ +EM ++ P+ T
Sbjct: 488 GFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTA 547
Query: 441 RILI 444
++L+
Sbjct: 548 KVLL 551
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 139/319 (43%), Gaps = 40/319 (12%)
Query: 220 KDRFEPDVI-----------------------------------LYTSLIHGWCRAGKIE 244
K F+PDVI Y LI +C AG IE
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 207
Query: 245 RAEEIFKDMKDAGIKP---NVHTYSIVIDSLC-RCGQITRAHDVFAEMIDAGCNPNAVTF 300
RAE + +M++ + P V Y+ I+ L R G A DVF M C P T+
Sbjct: 208 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 267
Query: 301 NSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVK 360
N ++ ++ KA ++ +++ +M+ C + Y L+ R+ E+A ++ + +
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 327
Query: 361 KGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDM 420
G+ P+ +N++ ++ GA +++ M+ + C P+ +YNI++ + +
Sbjct: 328 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 387
Query: 421 VLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVL 480
+ +EM + P + ++ +L+ + + ++KEM E ++P+ V ++L
Sbjct: 388 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM-SENGVEPDTFVLNSML 446
Query: 481 ELLRKAGQLKMHEELVEKM 499
L + GQ E+++ +M
Sbjct: 447 NLYGRLGQFTKMEKILAEM 465
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 121/256 (47%), Gaps = 5/256 (1%)
Query: 253 MKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGR 312
++ + +P+V ++++ID+ + Q A ++ +++++ P T+ L++ + AG
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 313 TEKVLQVFNQMKRFNCAADTIG---YNFLIECHC-RDENLEEAVKVLNLMVKKGVAPNSS 368
E+ V +M+ + + TIG YN IE R N EEA+ V M + P +
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 369 TFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEM 428
T+N + K + ++Y +M+ C PN TY L+ FA + ++ +++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 429 DENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQ 488
E+ +EP+V Y L+ + G+ A ++ +++ +P+ Y +++ +AG
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS-LMQHMGCEPDRASYNIMVDAYGRAGL 384
Query: 489 LKMHEELVEKMVARGF 504
E + E+M G
Sbjct: 385 HSDAEAVFEEMKRLGI 400
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 167/356 (46%), Gaps = 2/356 (0%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
+ ++M G++ +++ L+ Y G++ A+ ++ G+ PD V+ + +++S
Sbjct: 342 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 401
Query: 205 RKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
R R+ +A+ F + K+R +P+V+ Y +LI + G + A EIF+ M+ GIKPNV
Sbjct: 402 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 461
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
+ ++ + R + V + G N N +NS + ++ A EK + ++ M
Sbjct: 462 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 521
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDV 383
++ AD++ + LI CR EA+ L M + ++S+ +K V
Sbjct: 522 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQV 581
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL 443
A ++ +MK C P+ + Y ++ + S+ +L EM+ N +EP+ L
Sbjct: 582 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 641
Query: 444 ILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
+ F + G +N + LM +++ EK + V+ + + K +L++ M
Sbjct: 642 MRAFNKGGQPSNVFVLM-DLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMM 696
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 185/418 (44%), Gaps = 39/418 (9%)
Query: 124 EPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNR 183
E Y +++ G+ + A +L+D M + + T++ LI +G EA+ +
Sbjct: 179 ETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKK 238
Query: 184 MEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK----------------------- 220
M D GV PD V +IV+S+ R+ +A S+F+ +K
Sbjct: 239 MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 298
Query: 221 -----DRF----------EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTY 265
D F PDV+ +TS++H + G+IE +F+ M G+KPN+ +Y
Sbjct: 299 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 358
Query: 266 SIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR 325
+ ++ + G A V ++ G P+ V++ L+ + ++ + K +VF M++
Sbjct: 359 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 418
Query: 326 FNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNG 385
+ + YN LI+ + + L EAV++ M + G+ PN + ++ ++
Sbjct: 419 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVN 478
Query: 386 AHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILIL 445
+ + + NT YN + + + ++ + L + M + +V+ + T+ ILI
Sbjct: 479 VDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILIS 538
Query: 446 MFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
C + A +KEM E+ S+ +VY +VL K GQ+ E + +M G
Sbjct: 539 GSCRMSKYPEAISYLKEM-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 595
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 181/411 (44%), Gaps = 39/411 (9%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y +L+ G+ R A + M+ + T++ LI Y G AEAV F +ME
Sbjct: 393 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 452
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRA-----------------------------------E 210
G+ P+ V+V ++++ R ++ E
Sbjct: 453 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 512
Query: 211 EAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVI 269
+A + + S+ K + + D + +T LI G CR K A K+M+D I YS V+
Sbjct: 513 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 572
Query: 270 DSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCA 329
+ + GQ+T A +F +M AGC P+ + + S++ + + + K ++F +M+
Sbjct: 573 CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE 632
Query: 330 ADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRM 389
D+I + L+ + +++LM +K + + F IF L + A +
Sbjct: 633 PDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDL 692
Query: 390 YAKMKE-LNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFC 448
M L L LT N ++ +F +S ++ ++KL ++ + V N+ TY IL+
Sbjct: 693 IQMMDPYLPSLSIGLT-NQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLL 751
Query: 449 EKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
G+W +++ E + ++P+ Q+Y +++ ++ ++ + +K+
Sbjct: 752 AVGNWRKYIEVL-EWMSGAGIQPSNQMYRDIISFGERSAGIEFEPLIRQKL 801
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 163/378 (43%), Gaps = 55/378 (14%)
Query: 143 WHLIDSMKTRGV-EITAETFSVLIRRYVRAGLAAEAVHAFNRME---DYGVAPDKVAVSI 198
W +D + V + F VLIR R G V+ F M+ +Y D ++
Sbjct: 91 WEEVDGVLNSWVGRFARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARND--IYNM 148
Query: 199 VVSSLCRKRRAEEAQS-FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAG 257
++ R ++A+ FF+ K +PD Y +LI+ RAG+ A + DM A
Sbjct: 149 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 208
Query: 258 IKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVL 317
I P+ TY+ +I++ G A +V +M D G P+ VT N ++ + + K L
Sbjct: 209 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 268
Query: 318 QVFNQMKRFNCAADTIGYNFLIEC----------------------HCRDE--------- 346
F MK DT +N +I C CR +
Sbjct: 269 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 328
Query: 347 ------NLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNG-AHRMYAKMKELNCL 399
+E V MV +G+ PN ++N++ G A +H ++G A + +K+ +
Sbjct: 329 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYA-VHGMSGTALSVLGDIKQNGII 387
Query: 400 PNTLTYNILMRMFAES----KSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNN 455
P+ ++Y L+ + S K+ ++ L ++KE + +PNV TY LI + G
Sbjct: 388 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE----RRKPNVVTYNALIDAYGSNGFLAE 443
Query: 456 AYKLMKEMVEEKSLKPNL 473
A ++ ++M E+ +KPN+
Sbjct: 444 AVEIFRQM-EQDGIKPNV 460
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 126/262 (48%), Gaps = 3/262 (1%)
Query: 229 LYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM 288
+Y +I R +++A +F +M+ KP+ TY +I++ R GQ A ++ +M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 289 IDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL 348
+ A P+ T+N+L+ +G + L+V +M D + +N ++ +
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 349 EEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKE--LNCLPNTLTYN 406
+A+ LM V P+++TFN I C++KL + A ++ M+E C P+ +T+
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 324
Query: 407 ILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEE 466
+M +++ I+ + + M ++PN+ +Y L+ + G A ++ + +++
Sbjct: 325 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGD-IKQ 383
Query: 467 KSLKPNLQVYENVLELLRKAGQ 488
+ P++ Y +L ++ Q
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQ 405
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 155/324 (47%), Gaps = 1/324 (0%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
+ ++M G++ +++ L+ Y G++ A+ ++ G+ PD V+ + +++S
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 269
Query: 205 RKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
R R+ +A+ F + K+R +P+V+ Y +LI + G + A EIF+ M+ GIKPNV
Sbjct: 270 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 329
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
+ ++ + R + V + G N N +NS + ++ A EK + ++ M
Sbjct: 330 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 389
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDV 383
++ AD++ + LI CR EA+ L M + ++S+ +K V
Sbjct: 390 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQV 449
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL 443
A ++ +MK C P+ + Y ++ + S+ +L EM+ N +EP+ L
Sbjct: 450 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 509
Query: 444 ILMFCEKGHWNNAYKLMKEMVEEK 467
+ F + G +N + LM M E++
Sbjct: 510 MRAFNKGGQPSNVFVLMDLMREKE 533
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 185/418 (44%), Gaps = 39/418 (9%)
Query: 124 EPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNR 183
E Y +++ G+ + A +L+D M + + T++ LI +G EA+ +
Sbjct: 47 ETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKK 106
Query: 184 MEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK----------------------- 220
M D GV PD V +IV+S+ R+ +A S+F+ +K
Sbjct: 107 MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 166
Query: 221 -----DRFE----------PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTY 265
D F PDV+ +TS++H + G+IE +F+ M G+KPN+ +Y
Sbjct: 167 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 226
Query: 266 SIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR 325
+ ++ + G A V ++ G P+ V++ L+ + ++ + K +VF M++
Sbjct: 227 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 286
Query: 326 FNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNG 385
+ + YN LI+ + + L EAV++ M + G+ PN + ++ ++
Sbjct: 287 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVN 346
Query: 386 AHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILIL 445
+ + + NT YN + + + ++ + L + M + +V+ + T+ ILI
Sbjct: 347 VDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILIS 406
Query: 446 MFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
C + A +KEM E+ S+ +VY +VL K GQ+ E + +M G
Sbjct: 407 GSCRMSKYPEAISYLKEM-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 463
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 181/411 (44%), Gaps = 39/411 (9%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y +L+ G+ R A + M+ + T++ LI Y G AEAV F +ME
Sbjct: 261 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 320
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRA-----------------------------------E 210
G+ P+ V+V ++++ R ++ E
Sbjct: 321 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 380
Query: 211 EAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVI 269
+A + + S+ K + + D + +T LI G CR K A K+M+D I YS V+
Sbjct: 381 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 440
Query: 270 DSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCA 329
+ + GQ+T A +F +M AGC P+ + + S++ + + + K ++F +M+
Sbjct: 441 CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE 500
Query: 330 ADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRM 389
D+I + L+ + +++LM +K + + F IF L + A +
Sbjct: 501 PDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDL 560
Query: 390 YAKMKE-LNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFC 448
M L L LT N ++ +F +S ++ ++KL ++ + V N+ TY IL+
Sbjct: 561 IQMMDPYLPSLSIGLT-NQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLL 619
Query: 449 EKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
G+W +++ E + ++P+ Q+Y +++ ++ ++ + +K+
Sbjct: 620 AVGNWRKYIEVL-EWMSGAGIQPSNQMYRDIISFGERSAGIEFEPLIRQKL 669
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 133/301 (44%), Gaps = 48/301 (15%)
Query: 215 FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
FF+ K +PD Y +LI+ RAG+ A + DM A I P+ TY+ +I++
Sbjct: 34 FFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGS 93
Query: 275 CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIG 334
G A +V +M D G P+ VT N ++ + + K L F MK DT
Sbjct: 94 SGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTT 153
Query: 335 YNFLIEC----------------------HCRDE---------------NLEEAVKVLNL 357
+N +I C CR + +E V
Sbjct: 154 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 213
Query: 358 MVKKGVAPNSSTFNSIFGCIAKLHDVNG-AHRMYAKMKELNCLPNTLTYNILMRMFAES- 415
MV +G+ PN ++N++ G A +H ++G A + +K+ +P+ ++Y L+ + S
Sbjct: 214 MVAEGLKPNIVSYNALMGAYA-VHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSR 272
Query: 416 ---KSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPN 472
K+ ++ L ++KE + +PNV TY LI + G A ++ ++M E+ +KPN
Sbjct: 273 QPGKAKEVFLMMRKE----RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM-EQDGIKPN 327
Query: 473 L 473
+
Sbjct: 328 V 328
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 123/254 (48%), Gaps = 3/254 (1%)
Query: 229 LYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM 288
+Y +I R +++A +F +M+ KP+ TY +I++ R GQ A ++ +M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 289 IDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL 348
+ A P+ T+N+L+ +G + L+V +M D + +N ++ +
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 349 EEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKE--LNCLPNTLTYN 406
+A+ LM V P+++TFN I C++KL + A ++ M+E C P+ +T+
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 407 ILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEE 466
+M +++ I+ + + M ++PN+ +Y L+ + G A ++ + +++
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGD-IKQ 251
Query: 467 KSLKPNLQVYENVL 480
+ P++ Y +L
Sbjct: 252 NGIIPDVVSYTCLL 265
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 158/304 (51%), Gaps = 1/304 (0%)
Query: 161 FSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV- 219
++V++R +RA A F+ M +APD+ S +++S ++ + A S+ +
Sbjct: 158 YNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKME 217
Query: 220 KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQIT 279
+DR D++LY++LI R +A IF +K +GI P++ Y+ +I+ +
Sbjct: 218 QDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFR 277
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
A + EM +AG PN V++++L+ V+V+ + + L VF +MK NCA D N +I
Sbjct: 278 EARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMI 337
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
+ + + + ++EA ++ + K + PN ++N+I + A ++ M+ +
Sbjct: 338 DVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIE 397
Query: 400 PNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKL 459
N +TYN +++++ ++ + L +EM +EPN TY +I ++ + G + A L
Sbjct: 398 QNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATL 457
Query: 460 MKEM 463
+++
Sbjct: 458 FQKL 461
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 182/385 (47%), Gaps = 6/385 (1%)
Query: 105 QSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVL 164
+SLA +W + S Y +L + + FD+A L D M+ R + T+S L
Sbjct: 137 RSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTL 196
Query: 165 IRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRF 223
I + + G+ A+ +ME V+ D V S ++ R +A S F +K
Sbjct: 197 ITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGI 256
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHD 283
PD++ Y S+I+ + +A A + K+M +AG+ PN +YS ++ + A
Sbjct: 257 TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALS 316
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
VFAEM + C + T N ++ V+ + ++ ++F +++ + + + YN ++ +
Sbjct: 317 VFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYG 376
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
E EA+ + LM +K + N T+N++ K + A + +M+ PN +
Sbjct: 377 EAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAI 436
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
TY+ ++ ++ ++ +D L +++ + VE + Y+ +I+ + G +A +L+ E+
Sbjct: 437 TYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL 496
Query: 464 VEEKSLKPNLQVYENVLELLRKAGQ 488
L N+ E + +L KAG+
Sbjct: 497 ----KLPDNIP-RETAITILAKAGR 516
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 158/320 (49%), Gaps = 2/320 (0%)
Query: 185 EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKI 243
E+ P A ++V+ ++ R ++ + A FD ++ R PD Y++LI + + G
Sbjct: 147 EEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMF 206
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
+ A + M+ + ++ YS +I+ R ++A +F+ + +G P+ V +NS+
Sbjct: 207 DSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSM 266
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
+ V+ KA + + +M +T+ Y+ L+ + + EA+ V M +
Sbjct: 267 INVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNC 326
Query: 364 APNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLK 423
A + +T N + +L V A R++ +++++ PN ++YN ++R++ E++ +
Sbjct: 327 ALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIH 386
Query: 424 LKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELL 483
L + M +E NV TY +I ++ + A L++EM + + ++PN Y ++ +
Sbjct: 387 LFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEM-QSRGIEPNAITYSTIISIW 445
Query: 484 RKAGQLKMHEELVEKMVARG 503
KAG+L L +K+ + G
Sbjct: 446 GKAGKLDRAATLFQKLRSSG 465
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 167/348 (47%), Gaps = 13/348 (3%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
M+D+ G+L A L S++ +E +++ ++R Y A L EA+H F M+
Sbjct: 336 MIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD 395
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAE 247
+ + V + ++ + E+A + ++ R EP+ I Y+++I W +AGK++RA
Sbjct: 396 IEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAA 455
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
+F+ ++ +G++ + Y +I + R G + A + E+ P+ + + + +
Sbjct: 456 TLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL----KLPDNIPRETAITIL 511
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
KAGRTE+ VF Q D + +I + R++ ++V M G P+S
Sbjct: 512 AKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDS 571
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCL-PNTLTYNILMRMFAESKSIDMVLKLKK 426
+ + K + A +Y +M+E C+ P+ + + +L +++ K +MV L +
Sbjct: 572 NVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQML-SLYSSKKDFEMVESLFQ 630
Query: 427 EMDENQVEPNVNT---YRILILMFCEKGHWNNAYKLMKEMVEEKSLKP 471
++ + PNVN+ + ++ ++ N+A ++M M E LKP
Sbjct: 631 RLESD---PNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKP 675
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 124/285 (43%), Gaps = 7/285 (2%)
Query: 117 KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
K+ + Y M+ + GK + A +L+ M++RG+E A T+S +I + +AG
Sbjct: 394 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 453
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHG 236
A F ++ GV D+V ++ + R A+ +K PD I + I
Sbjct: 454 AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK---LPDNIPRETAITI 510
Query: 237 WCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPN 296
+AG+ E A +F+ ++G ++ + +I+ R + +VF +M AG P+
Sbjct: 511 LAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPD 570
Query: 297 AVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCA-ADTIGYNFLIECHCRDENLEEAVKVL 355
+ ++ + K EK V+ +M+ C D + + L + + E V+ L
Sbjct: 571 SNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDF--EMVESL 628
Query: 356 NLMVKKGVAPNSSTFNSIFGCIAKLHD-VNGAHRMYAKMKELNCL 399
++ NS + + + + D +N A R+ +M+E L
Sbjct: 629 FQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGIL 673
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 130/244 (53%)
Query: 220 KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQIT 279
+ + DV++ T+++ C+ G A+ +F +M + GI PNV TY+ +IDS C G+ +
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
A + MI+ NP+ VTF++L+ VK + + +++ +M R++ TI YN +I
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
+ C+ + +++A ++L+ M KG +P+ TF+++ K V+ ++ +M +
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 400 PNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKL 459
NT+TY L+ F + +D L EM V P+ T+ ++ C K A+ +
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Query: 460 MKEM 463
++++
Sbjct: 243 LEDL 246
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 115/215 (53%), Gaps = 1/215 (0%)
Query: 162 SVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVK 220
+ ++ R + G A + F M + G+ P+ + + ++ S C R +A ++
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 221 DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITR 280
+ PD++ +++LI+ + + K+ AEEI+K+M I P TY+ +ID C+ ++
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 281 AHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIE 340
A + M GC+P+ VTF++L+ + KA R + +++F +M R A+T+ Y LI
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 193
Query: 341 CHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFG 375
C+ +L+ A +LN M+ GVAP+ TF+ +
Sbjct: 194 GFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA 228
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%)
Query: 253 MKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGR 312
M + IK +V + ++D LC+ G A ++F EM + G PN +T+N ++ +GR
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 313 TEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNS 372
Q+ M D + ++ LI ++ + EA ++ M++ + P + T+NS
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 373 IFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQ 432
+ K V+ A RM M C P+ +T++ L+ + ++K +D +++ EM
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 433 VEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
+ N TY LI FC+ G + A L+ EM+
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 212
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 126/245 (51%), Gaps = 1/245 (0%)
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAE 247
+ D V + +V LC+ AQ+ F + ++ P+V+ Y +I +C +G+ A+
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
++ + M + I P++ T+S +I++ + +++ A +++ EM+ P +T+NS++
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
K R + ++ + M C+ D + ++ LI +C+ + ++ +++ M ++G+ N+
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKE 427
T+ ++ ++ D++ A + +M P+ +T++ ++ K + + ++
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 428 MDENQ 432
+ +++
Sbjct: 246 LQKSE 250
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 82/146 (56%), Gaps = 1/146 (0%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV 219
TFS LI +V+ +EA + M + + P + + ++ C++ R ++A+ DS+
Sbjct: 82 TFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSM 141
Query: 220 KDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
+ PDV+ +++LI+G+C+A +++ EIF +M GI N TY+ +I C+ G +
Sbjct: 142 ASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL 201
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLM 304
A D+ EMI G P+ +TF+ ++
Sbjct: 202 DAAQDLLNEMISCGVAPDYITFHCML 227
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A +L M +G+ T++ +I + +G ++A M + + PD V S +++
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 202 SLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
+ ++R+ EA+ + + ++ P I Y S+I G+C+ +++ A+ + M G P
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+V T+S +I+ C+ ++ ++F EM G N VT+ +L+ + G + +
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVK 360
N+M A D I ++ ++ C + L +A +L + K
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 35/170 (20%)
Query: 119 FPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAV 178
FP++ Y M+D K D A ++DSM ++G TFS LI Y +A +
Sbjct: 112 FPTTI-TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 170
Query: 179 HAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWC 238
F M G+ + V YT+LIHG+C
Sbjct: 171 EIFCEMHRRGIVANTVT----------------------------------YTTLIHGFC 196
Query: 239 RAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM 288
+ G ++ A+++ +M G+ P+ T+ ++ LC ++ +A + ++
Sbjct: 197 QVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 86/187 (45%), Gaps = 1/187 (0%)
Query: 323 MKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHD 382
M + + AD + +++ C+D N A + M +KG+ PN T+N +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 383 VNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRI 442
+ A ++ M E P+ +T++ L+ F + + + ++ KEM + P TY
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 443 LILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
+I FC++ ++A +++ M K P++ + ++ KA ++ E+ +M R
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMA-SKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 503 GFVSRPL 509
G V+ +
Sbjct: 180 GIVANTV 186
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 164/360 (45%), Gaps = 2/360 (0%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
L+ M+ G++ + ++ Y + + F R+++ G P V +++
Sbjct: 436 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYT 495
Query: 205 RKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
+ + +A +K+ + ++ Y+ +I+G+ + A +F+DM G+KP+V
Sbjct: 496 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 555
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
Y+ +I + C G + RA EM P TF ++ + K+G + L+VF+ M
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDV 383
+R C +N LI +E+AV++L+ M GV+ N T+ I A + D
Sbjct: 616 RRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDT 675
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL 443
A + +++ + TY L++ +S + L + KEM + N Y IL
Sbjct: 676 GKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNIL 735
Query: 444 ILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
I + +G A L+++M +E +KP++ Y + + KAG + + +E+M A G
Sbjct: 736 IDGWARRGDVWEAADLIQQMKKE-GVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 794
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 169/390 (43%), Gaps = 42/390 (10%)
Query: 118 NFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEA 177
F + Y +++L K+ A + MK GV+ +T+S++I +V+ A A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 178 VHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA-QSFFDSVKDRFEPDVILYTSLIHG 236
F M G+ PD + + ++S+ C + A Q+ + K R P + +IHG
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 237 WCRAG-----------------------------------KIERAEEIFKDMKDAGIKPN 261
+ ++G ++E+A EI +M AG+ N
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 262 VHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFN 321
HTY+ ++ G +A + F + + G + + T+ +L++ K+GR + L V
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 322 QMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLH 381
+M N ++ YN LI+ R ++ EA ++ M K+GV P+ T+ S +K
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 382 DVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYR 441
D+N A + +M+ L PN TY L++ +A + + L +EM ++P+ Y
Sbjct: 779 DMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838
Query: 442 ILILMFCEKGHWNNAY------KLMKEMVE 465
L+ + AY + KEMVE
Sbjct: 839 CLLTSLLSRASIAEAYIYSGVMTICKEMVE 868
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 171/357 (47%), Gaps = 2/357 (0%)
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR 208
+K G T T+ LI Y + G ++A+ M++ GV + S++++ + +
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 209 AEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSI 267
A + F D VK+ +PDVILY ++I +C G ++RA + K+M+ +P T+
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 268 VIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFN 327
+I + G + R+ +VF M GC P TFN L+ V+ + EK +++ ++M
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 328 CAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAH 387
+A+ Y +++ + + +A + + +G+ + T+ ++ K + A
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 714
Query: 388 RMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMF 447
+ +M N N+ YNIL+ +A + L ++M + V+P+++TY I
Sbjct: 715 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC 774
Query: 448 CEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+ G N A + ++EM E +KPN++ Y +++ +A + E+M A G
Sbjct: 775 SKAGDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 179/432 (41%), Gaps = 41/432 (9%)
Query: 111 NWATSLKNFPSSPEP----YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIR 166
NW + F +P + M+ G+ A + M+ RG+ T+ ++ LI
Sbjct: 293 NWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIH 352
Query: 167 RYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEP- 225
Y EA+ +M++ G+ V S++V + AE A +FD K +
Sbjct: 353 AYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTL 412
Query: 226 DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVF 285
+ +Y +I+ C+ +ERAE + ++M++ GI + Y ++D + VF
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 286 AEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ--------------------------- 318
+ + G P VT+ L+ ++ K G+ K L+
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 319 --------VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
VF M + D I YN +I C N++ A++ + M K P + TF
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE 430
I AK D+ + ++ M+ C+P T+N L+ E + ++ +++ EM
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 431 NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK 490
V N +TY ++ + G A++ + E L ++ YE +L+ K+G+++
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE-GLDVDIFTYEALLKACCKSGRMQ 711
Query: 491 MHEELVEKMVAR 502
+ ++M AR
Sbjct: 712 SALAVTKEMSAR 723
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 178/369 (48%), Gaps = 15/369 (4%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVA-VSIVV 200
AW +I M +G+ T+++L+ + G + M G + + S+++
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 201 SSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIK 259
S LC+ R +EA S F+ +K D PD++ Y+ +IHG C+ GK + A ++ +M D I
Sbjct: 371 SGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Query: 260 PNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV 319
PN T+ ++ LC+ G + A + +I +G + V +N ++ + K+G E+ L++
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALEL 490
Query: 320 FNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAK 379
F + +N LI +C+ +N+ EA K+L+++ G+AP+ ++ ++ A
Sbjct: 491 FKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN 550
Query: 380 LHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAES---KSIDMVLKLK---------KE 427
+ + +MK P +TY+++ + ++ + VL+ + ++
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRD 610
Query: 428 MDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
M+ + P+ TY +I C H + A+ + E+++ ++L + Y +++ L G
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL-EIMKSRNLDASSATYNILIDSLCVYG 669
Query: 488 QLKMHEELV 496
++ + +
Sbjct: 670 YIRKADSFI 678
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 193/394 (48%), Gaps = 16/394 (4%)
Query: 115 SLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLA 174
+ + + S+ + +L L+ +LR D + +++ MK + + ++ ++++ ++ +
Sbjct: 116 TFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRET--- 172
Query: 175 AEAVHAFNRMED-YGVAPDKV--AVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILY 230
++M D Y DK S VV LCR+++ E+A F + + + P V+ +
Sbjct: 173 -------DKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSF 225
Query: 231 TSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMID 290
S++ G+C+ G ++ A+ F + G+ P+V++++I+I+ LC G I A ++ ++M
Sbjct: 226 NSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 285
Query: 291 AGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEE 350
G P++VT+N L + G +V M + D I Y L+ C+ N++
Sbjct: 286 HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDM 345
Query: 351 AVKVLNLMVKKGVAPNSSTFNSI-FGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILM 409
+ +L M+ +G NS S+ + K ++ A ++ +MK P+ + Y+I++
Sbjct: 346 GLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 405
Query: 410 RMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSL 469
+ DM L L EM + ++ PN T+ L+L C+KG A L+ ++
Sbjct: 406 HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE- 464
Query: 470 KPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
++ +Y V++ K+G ++ EL + ++ G
Sbjct: 465 TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG 498
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 172/394 (43%), Gaps = 51/394 (12%)
Query: 122 SPEPYIEMLDLAGK--LRHFDLAWHLIDSMKTRGVEITAET-FSVLIRRYVRAGLAAEAV 178
SP+ + L G+ L + D+ L+ M +RG E+ + SV++ + G EA+
Sbjct: 324 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEAL 383
Query: 179 HAFNRMEDYGVAPDKVAVSIVVSSLCR--------------------------------- 205
FN+M+ G++PD VA SIV+ LC+
Sbjct: 384 SLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGL 443
Query: 206 --KRRAEEAQSFFDSVKDRFEP-DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNV 262
K EA+S DS+ E D++LY +I G+ ++G IE A E+FK + + GI P+V
Sbjct: 444 CQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSV 503
Query: 263 HTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQ 322
T++ +I C+ I A + + G P+ V++ +LM + G T+ + ++ +
Sbjct: 504 ATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRRE 563
Query: 323 MKRFNCAADTIGYNFLIECHCRD---EN---------LEEAVKVLNLMVKKGVAPNSSTF 370
MK + Y+ + + CR EN E+ + L M +G+ P+ T+
Sbjct: 564 MKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITY 623
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE 430
N+I + ++ ++GA MK N ++ TYNIL+ I + E
Sbjct: 624 NTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQE 683
Query: 431 NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
V + Y LI C KG A KL +++
Sbjct: 684 QNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLL 717
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 116/221 (52%), Gaps = 8/221 (3%)
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
+ +M D N + ++NS++ H + T+K+ V+ ++K N Y+ +++ C
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVL-YHFR--ETDKMWDVYKEIKDKNEHT----YSTVVDGLC 198
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
R + LE+AV L K + P+ +FNSI KL V+ A + + + +P+
Sbjct: 199 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 258
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
++NIL+ SI L+L +M+++ VEP+ TY IL F G + A++++++M
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318
Query: 464 VEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
++ K L P++ Y +L + G + M L++ M++RGF
Sbjct: 319 LD-KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 146/366 (39%), Gaps = 52/366 (14%)
Query: 68 DLALEFSRLSAAHPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYI 127
D AL A +SP I G + G F +L ++ + P+S
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLG-KFDMALWLYDEMCDKRILPNSRTHGA 438
Query: 128 EMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDY 187
+L L K + A L+DS+ + G + ++++I Y ++G EA+ F + +
Sbjct: 439 LLLGLCQKGMLLE-ARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 188 GVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLI------------ 234
G+ P + ++ C+ + EA+ D +K P V+ YT+L+
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 235 -----------------------HGWCRAGK------------IERAEEIFKDMKDAGIK 259
G CR K E+ ++ +DM+ GI
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 260 PNVHTYSIVIDSLCRCGQITRAHDVFAEMIDA-GCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
P+ TY+ +I LCR ++ A VF E++ + + ++ T+N L+ G K
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAF-VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADS 676
Query: 319 VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
++ N + Y LI+ HC + E AVK+ + ++ +G + ++++ +
Sbjct: 677 FIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
Query: 379 KLHDVN 384
+ H +N
Sbjct: 737 RRHLMN 742
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 178/369 (48%), Gaps = 15/369 (4%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVA-VSIVV 200
AW +I M +G+ T+++L+ + G + M G + + S+++
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 201 SSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIK 259
S LC+ R +EA S F+ +K D PD++ Y+ +IHG C+ GK + A ++ +M D I
Sbjct: 371 SGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Query: 260 PNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV 319
PN T+ ++ LC+ G + A + +I +G + V +N ++ + K+G E+ L++
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALEL 490
Query: 320 FNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAK 379
F + +N LI +C+ +N+ EA K+L+++ G+AP+ ++ ++ A
Sbjct: 491 FKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN 550
Query: 380 LHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAES---KSIDMVLKLK---------KE 427
+ + +MK P +TY+++ + ++ + VL+ + ++
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRD 610
Query: 428 MDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
M+ + P+ TY +I C H + A+ + E+++ ++L + Y +++ L G
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL-EIMKSRNLDASSATYNILIDSLCVYG 669
Query: 488 QLKMHEELV 496
++ + +
Sbjct: 670 YIRKADSFI 678
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 193/394 (48%), Gaps = 16/394 (4%)
Query: 115 SLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLA 174
+ + + S+ + +L L+ +LR D + +++ MK + + ++ ++++ ++ +
Sbjct: 116 TFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRET--- 172
Query: 175 AEAVHAFNRMED-YGVAPDKV--AVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILY 230
++M D Y DK S VV LCR+++ E+A F + + + P V+ +
Sbjct: 173 -------DKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSF 225
Query: 231 TSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMID 290
S++ G+C+ G ++ A+ F + G+ P+V++++I+I+ LC G I A ++ ++M
Sbjct: 226 NSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 285
Query: 291 AGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEE 350
G P++VT+N L + G +V M + D I Y L+ C+ N++
Sbjct: 286 HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDM 345
Query: 351 AVKVLNLMVKKGVAPNSSTFNSI-FGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILM 409
+ +L M+ +G NS S+ + K ++ A ++ +MK P+ + Y+I++
Sbjct: 346 GLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 405
Query: 410 RMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSL 469
+ DM L L EM + ++ PN T+ L+L C+KG A L+ ++
Sbjct: 406 HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE- 464
Query: 470 KPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
++ +Y V++ K+G ++ EL + ++ G
Sbjct: 465 TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG 498
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 172/394 (43%), Gaps = 51/394 (12%)
Query: 122 SPEPYIEMLDLAGK--LRHFDLAWHLIDSMKTRGVEITAET-FSVLIRRYVRAGLAAEAV 178
SP+ + L G+ L + D+ L+ M +RG E+ + SV++ + G EA+
Sbjct: 324 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEAL 383
Query: 179 HAFNRMEDYGVAPDKVAVSIVVSSLCR--------------------------------- 205
FN+M+ G++PD VA SIV+ LC+
Sbjct: 384 SLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGL 443
Query: 206 --KRRAEEAQSFFDSVKDRFEP-DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNV 262
K EA+S DS+ E D++LY +I G+ ++G IE A E+FK + + GI P+V
Sbjct: 444 CQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSV 503
Query: 263 HTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQ 322
T++ +I C+ I A + + G P+ V++ +LM + G T+ + ++ +
Sbjct: 504 ATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRRE 563
Query: 323 MKRFNCAADTIGYNFLIECHCRD---EN---------LEEAVKVLNLMVKKGVAPNSSTF 370
MK + Y+ + + CR EN E+ + L M +G+ P+ T+
Sbjct: 564 MKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITY 623
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE 430
N+I + ++ ++GA MK N ++ TYNIL+ I + E
Sbjct: 624 NTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQE 683
Query: 431 NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
V + Y LI C KG A KL +++
Sbjct: 684 QNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLL 717
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 116/221 (52%), Gaps = 8/221 (3%)
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
+ +M D N + ++NS++ H + T+K+ V+ ++K N Y+ +++ C
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVL-YHFR--ETDKMWDVYKEIKDKNEHT----YSTVVDGLC 198
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
R + LE+AV L K + P+ +FNSI KL V+ A + + + +P+
Sbjct: 199 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 258
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
++NIL+ SI L+L +M+++ VEP+ TY IL F G + A++++++M
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318
Query: 464 VEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
++ K L P++ Y +L + G + M L++ M++RGF
Sbjct: 319 LD-KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 146/366 (39%), Gaps = 52/366 (14%)
Query: 68 DLALEFSRLSAAHPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYI 127
D AL A +SP I G + G F +L ++ + P+S
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLG-KFDMALWLYDEMCDKRILPNSRTHGA 438
Query: 128 EMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDY 187
+L L K + A L+DS+ + G + ++++I Y ++G EA+ F + +
Sbjct: 439 LLLGLCQKGMLLE-ARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 188 GVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIH----------- 235
G+ P + ++ C+ + EA+ D +K P V+ YT+L+
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 236 ------------------------GWCRAGK------------IERAEEIFKDMKDAGIK 259
G CR K E+ ++ +DM+ GI
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 260 PNVHTYSIVIDSLCRCGQITRAHDVFAEMIDA-GCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
P+ TY+ +I LCR ++ A VF E++ + + ++ T+N L+ G K
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAF-VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADS 676
Query: 319 VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
++ N + Y LI+ HC + E AVK+ + ++ +G + ++++ +
Sbjct: 677 FIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
Query: 379 KLHDVN 384
+ H +N
Sbjct: 737 RRHLMN 742
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 141/286 (49%), Gaps = 2/286 (0%)
Query: 155 EITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQS 214
++T + ++ L+ R GL E + M + V+PD + +V+ C+ EA+
Sbjct: 117 KLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQ 176
Query: 215 FFD-SVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLC 273
+ ++ +PD YTS I G CR +++ A ++FK+M G N +Y+ +I L
Sbjct: 177 YVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLF 236
Query: 274 RCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTI 333
+I A + +M D C PN T+ L+ +G+ + + +F QM D
Sbjct: 237 EAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDC 296
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM 393
Y LI+ C + L+EA +L M++ G+ PN T+N++ K +V+ A + +KM
Sbjct: 297 MYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKM 355
Query: 394 KELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNT 439
E N +P+ +TYN L+ S ++D +L M+E+ + PN T
Sbjct: 356 LEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 148/314 (47%), Gaps = 8/314 (2%)
Query: 192 DKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFK 251
+ V ++ V CR R + SF +K + P Y +L+ R G +E + ++
Sbjct: 91 NSVRDALFVVDFCRTMR--KGDSF--EIKYKLTPKC--YNNLLSSLARFGLVEEMKRLYT 144
Query: 252 DMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAG 311
+M + + P+++T++ +++ C+ G + A +I AGC+P+ T+ S + H +
Sbjct: 145 EMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRK 204
Query: 312 RTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFN 371
+ +VF +M + C + + Y LI + ++EA+ +L M PN T+
Sbjct: 205 EVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYT 264
Query: 372 SIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDEN 431
+ + + A ++ +M E P+ Y +L++ F ++D L + M EN
Sbjct: 265 VLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLEN 324
Query: 432 QVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKM 491
+ PNV TY LI FC+K + + A L+ +M+E+ +L P+L Y ++ +G L
Sbjct: 325 GLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQ-NLVPDLITYNTLIAGQCSSGNLDS 382
Query: 492 HEELVEKMVARGFV 505
L+ M G V
Sbjct: 383 AYRLLSLMEESGLV 396
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
+ D A+ + M G +++ LI A EA+ +M+D P+
Sbjct: 204 KEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTY 263
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD 255
++++ +LC + EA + F + + +PD +YT LI +C ++ A + + M +
Sbjct: 264 TVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLE 323
Query: 256 AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEK 315
G+ PNV TY+ +I C+ + +A + ++M++ P+ +T+N+L+ AG+
Sbjct: 324 NGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLI-----AGQ--- 374
Query: 316 VLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSST 369
C NL+ A ++L+LM + G+ PN T
Sbjct: 375 ---------------------------CSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 162/365 (44%), Gaps = 2/365 (0%)
Query: 141 LAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVV 200
L+ L+ ++ G I+ E VLI + R GLA F ++ G+ P + V+
Sbjct: 128 LSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVI 187
Query: 201 SSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIK 259
+L + + A F ++ D +PD Y LIHG C+ G ++ A + K M+ G +
Sbjct: 188 DALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNR 247
Query: 260 PNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV 319
PNV TY+I+ID G++ A M NPN T + + + K +V
Sbjct: 248 PNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEV 307
Query: 320 FNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAK 379
+ +GY+ ++ C + +E + L + ++G P+SSTFN+ C+ K
Sbjct: 308 LVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLK 367
Query: 380 LHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNT 439
HD+ R++ P Y +L++ ++ + K+M + + +V +
Sbjct: 368 GHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYS 427
Query: 440 YRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
Y +I C+ NA + EM +++ + PNL + L G +K ++EK+
Sbjct: 428 YNAVIDCLCKARRIENAAMFLTEM-QDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKL 486
Query: 500 VARGF 504
+ GF
Sbjct: 487 LVHGF 491
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 142/317 (44%), Gaps = 3/317 (0%)
Query: 173 LAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYT 231
+A E ++ + G PD + +S L + E FD R +P Y
Sbjct: 335 MAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYL 394
Query: 232 SLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDA 291
L+ A + + K M G+ +V++Y+ VID LC+ +I A EM D
Sbjct: 395 VLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDR 454
Query: 292 GCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEA 351
G +PN VTFN+ + + G +KV V ++ D I ++ +I C CR + +++A
Sbjct: 455 GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDA 514
Query: 352 VKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRM 411
M++ G+ PN T+N + D + + +++AKMKE P+ YN ++
Sbjct: 515 FDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQS 574
Query: 412 FAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKP 471
F + + + +L K M ++P+ TY LI E G + A ++ +E P
Sbjct: 575 FCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSS-IERHGCVP 633
Query: 472 NLQVYENVLEL-LRKAG 487
+ V EL LRK+G
Sbjct: 634 DSYTKRLVEELDLRKSG 650
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 173/419 (41%), Gaps = 37/419 (8%)
Query: 122 SPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAF 181
S Y ++D K DLA+ M++ G + T+++LI + G+ EA+
Sbjct: 179 STRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLV 238
Query: 182 NRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGW--- 237
+ME G P+ +I++ R +EA + ++ R P+ + +HG
Sbjct: 239 KQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRC 298
Query: 238 ---CRA-----GKIER------------------------AEEIFKDMKDAGIKPNVHTY 265
C+A G +E+ + + + + G P+ T+
Sbjct: 299 LPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTF 358
Query: 266 SIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR 325
+ + L + + +F + G P + L++ + A R + + QM
Sbjct: 359 NAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGV 418
Query: 326 FNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNG 385
+ YN +I+C C+ +E A L M +G++PN TFN+ + DV
Sbjct: 419 DGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKK 478
Query: 386 AHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILIL 445
H + K+ P+ +T+++++ +K I KEM E +EPN TY ILI
Sbjct: 479 VHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIR 538
Query: 446 MFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
C G + + KL +M +E L P+L Y ++ K ++K EEL++ M+ G
Sbjct: 539 SCCSTGDTDRSVKLFAKM-KENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL 596
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 113/232 (48%), Gaps = 7/232 (3%)
Query: 121 SSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHA 180
SS Y ++D K R + A + M+ RG+ TF+ + Y G +
Sbjct: 423 SSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGV 482
Query: 181 FNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFE----PDVILYTSLIHG 236
++ +G PD + S++++ LCR A+E + FD K+ E P+ I Y LI
Sbjct: 483 LEKLLVHGFKPDVITFSLIINCLCR---AKEIKDAFDCFKEMLEWGIEPNEITYNILIRS 539
Query: 237 WCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPN 296
C G +R+ ++F MK+ G+ P+++ Y+ I S C+ ++ +A ++ M+ G P+
Sbjct: 540 CCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPD 599
Query: 297 AVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL 348
T+++L++ ++GR + ++F+ ++R C D+ + E R L
Sbjct: 600 NFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELDLRKSGL 651
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 145/350 (41%), Gaps = 37/350 (10%)
Query: 190 APDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEE 248
A D+ S++ ++L RK + ++D + L LI W R G + +
Sbjct: 107 AKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCND 166
Query: 249 IFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHV 308
+F + G+KP+ Y+ VID+L + + A+ F +M GC P+ T+N L+
Sbjct: 167 VFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVC 226
Query: 309 KAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSS 368
K G ++ +++ QM++ + Y LI+ ++EA+K L +M + + PN +
Sbjct: 227 KKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEA 286
Query: 369 TFNS----IFGCI----------------AKLHDVNGAHRMYA---------------KM 393
T + IF C+ + L V +Y K+
Sbjct: 287 TIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKI 346
Query: 394 KELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHW 453
E +P++ T+N M + + ++ V+P N Y +L+ +
Sbjct: 347 GERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRF 406
Query: 454 NNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+ + +K+M + L ++ Y V++ L KA +++ + +M RG
Sbjct: 407 SEGDRYLKQMGVD-GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRG 455
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 43/294 (14%)
Query: 214 SFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLC 273
S FD V + D L + L + R G + + E+ K+++D+G + + ++I S
Sbjct: 100 SNFDPV---YAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWG 156
Query: 274 RCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTI 333
R G +DVFA++ G P+ +N+++ VK+ + F QM+ C D
Sbjct: 157 RLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRF 216
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM 393
YN LI C+ ++EA++++ M ++G +R
Sbjct: 217 TYNILIHGVCKKGVVDEAIRLVKQMEQEG------------------------NR----- 247
Query: 394 KELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHW 453
PN TY IL+ F + +D LK + M ++ PN T R +
Sbjct: 248 ------PNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPP 301
Query: 454 NNAYKLMKEMVEEKSLKPNLQ--VYENVLELLRKAGQLKMHEELVEKMVARGFV 505
A++++ +E+ S NLQ Y+ VL L K + + K+ RG++
Sbjct: 302 CKAFEVLVGFMEKDS---NLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYI 352
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 161/317 (50%), Gaps = 15/317 (4%)
Query: 196 VSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMK 254
++I V+SLC+ R E A++ D ++ PDVI Y +LI G+ R I+ A + + M+
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 255 DAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTE 314
+AGI+P+V TY+ +I + + R +F EM+ +G +P+ ++N+LM + K GR
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHG 135
Query: 315 KVLQVFNQ---MKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFN 371
+ ++ ++ + DT YN L++ C+ + + A+++ +K V P T+N
Sbjct: 136 EAFKILHEDIHLAGLVPGIDT--YNILLDALCKSGHTDNAIELFK-HLKSRVKPELMTYN 192
Query: 372 SIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSID----MVLKLKKE 427
+ + K V M ++K+ PN +TY +++M+ ++K I+ + LK+KKE
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 428 MDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
N LI + G AY+ M E+V + ++ Y +L L K G
Sbjct: 253 GYTFDGFANCAVVSALI----KTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDG 308
Query: 488 QLKMHEELVEKMVARGF 504
L ++L+E++ +G
Sbjct: 309 NLDAVDDLLEEIEMKGL 325
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 161/360 (44%), Gaps = 43/360 (11%)
Query: 139 FDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSI 198
D A+ + M+ G+E T++ LI + + + F+ M G++PD + +
Sbjct: 64 IDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNT 123
Query: 199 VVSSLCRKRRAEEAQSFF--DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDA 256
++S + R EA D P + Y L+ C++G + A E+FK +K +
Sbjct: 124 LMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLK-S 182
Query: 257 GIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKV 316
+KP + TY+I+I+ LC+ ++ + E+ +G PNAVT+ ++++++ K R EK
Sbjct: 183 RVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKG 242
Query: 317 LQVFNQMKR--------FNCAA----------------------------DTIGYNFLIE 340
LQ+F +MK+ NCA D + YN L+
Sbjct: 243 LQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLN 302
Query: 341 CHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLP 400
+ +D NL+ +L + KG+ P+ T I + + + GA + A + E+ P
Sbjct: 303 LYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQP 362
Query: 401 NTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLM 460
+ +T N L+ ++ +D ++L M+ + TY ++ C+ G A KL+
Sbjct: 363 SVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLL 418
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 130/266 (48%), Gaps = 10/266 (3%)
Query: 143 WHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSS 202
W ++ +K G A T++ +++ Y + + + F +M+ G D A VVS+
Sbjct: 209 W-MMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSA 267
Query: 203 LCRKRRAEEA-QSFFDSVKDRFEP-DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
L + RAEEA + + V+ D++ Y +L++ + + G ++ +++ ++++ G+KP
Sbjct: 268 LIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKP 327
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+ +T++I+++ L G A A + + G P+ VT N L+ KAG ++ +++F
Sbjct: 328 DDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLF 387
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
M+ D Y ++ C+D L A K+L KG+ SS ++ I +
Sbjct: 388 ASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGIRET 443
Query: 381 HDVNGAHRMYAKMK-ELNCLPNTLTY 405
A + + K+K + C NTL Y
Sbjct: 444 VSYQAARKTHIKIKAAIEC--NTLMY 467
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 158/315 (50%), Gaps = 3/315 (0%)
Query: 153 GVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVA-PDKVAVSIVVSSLCRKRRAEE 211
G++ F++L++ + + G A M+ G++ P+ + S ++ L R++E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 212 AQSFFDSV--KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVI 269
A F+ + K+ PD + + +I+G+CRAG++ERA++I MK G PNV+ YS ++
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 270 DSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCA 329
+ C+ G+I A F E+ G + V + +LM + G T++ +++ +MK C
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 330 ADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRM 389
ADT+ YN ++ + EEA+++L+ +GV N ++ I + ++ A +
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 390 YAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCE 449
+ M E P+ T+N L+ ES ++ +++ + P ++ ++ C+
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Query: 450 KGHWNNAYKLMKEMV 464
+ + ++L+ +V
Sbjct: 491 ERKLVHVFELLDSLV 505
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 186/407 (45%), Gaps = 6/407 (1%)
Query: 107 LAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIR 166
L FN A+ K F + Y +LD + + F ++ MK F L+R
Sbjct: 73 LDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMR 132
Query: 167 RYVRAGLAAEAVHAFNRMEDYG-VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRF-- 223
+ R+ L + + FN ++ V P A+S ++ L ++ K
Sbjct: 133 HFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGL 192
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIK-PNVHTYSIVIDSLCRCGQITRAH 282
+P+ ++ L+ C+ G I A + ++MK +GI PN TYS ++D L + A
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 283 DVFAEMIDA-GCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIEC 341
++F +MI G +P+ VTFN ++ +AG E+ ++ + MK+ C + Y+ L+
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 342 HCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPN 401
C+ ++EA + + + K G+ ++ + ++ C + + + A ++ +MK C +
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRAD 372
Query: 402 TLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMK 461
TLTYN+++R + + L++ + V N +YRI++ C G A K +
Sbjct: 373 TLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLS 432
Query: 462 EMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVSRP 508
M E+ + P+ + ++ L ++G ++ ++ + G + P
Sbjct: 433 VM-SERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGP 478
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 109/241 (45%), Gaps = 3/241 (1%)
Query: 122 SPEPYIEMLDLAGKLRHFDL--AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVH 179
SP+P + + G R ++ A ++D MK G +S L+ + + G EA
Sbjct: 265 SPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQ 324
Query: 180 AFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWC 238
F+ ++ G+ D V + +++ CR +EA +K R D + Y ++ G
Sbjct: 325 TFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLS 384
Query: 239 RAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAV 298
G+ E A ++ G+ N +Y I++++LC G++ +A + M + G P+
Sbjct: 385 SEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHA 444
Query: 299 TFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLM 358
T+N L+ ++G TE ++V R + ++E C++ L ++L+ +
Sbjct: 445 TWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Query: 359 V 359
V
Sbjct: 505 V 505
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 146/305 (47%), Gaps = 16/305 (5%)
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA--QSFFDSVKDRFEPDVILYTSLI 234
A + M + G+ P ++++++ +LCR +A + F + K +PD Y +LI
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 235 HGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCN 294
G CR G+I+ A+++F +M + P V TY+ +I+ LC + A EM G
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIE 259
Query: 295 PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKV 354
PN T++SLM K GR+ + +++F M C + + Y LI C+++ ++EAV++
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVEL 319
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
L+ M +G+ P++ + + + A +M PN LT+NI ++ E
Sbjct: 320 LDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNE 379
Query: 415 ----------SKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
S++ + L ++ + V T L+ C+KG + A +L+ E+V
Sbjct: 380 VVRGLCANYPSRAFTLYLSMRSR----GISVEVETLESLVKCLCKKGEFQKAVQLVDEIV 435
Query: 465 EEKSL 469
+ +
Sbjct: 436 TDGCI 440
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 147/327 (44%), Gaps = 35/327 (10%)
Query: 139 FDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSI 198
F A LI MK ++ + + R Y R +++ F++M+D+ P + A
Sbjct: 67 FKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVT 126
Query: 199 VVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI 258
V++ L EE Q + A + +K+M++ G+
Sbjct: 127 VLAIL-----VEENQ-----------------------------LNLAFKFYKNMREIGL 152
Query: 259 KPNVHTYSIVIDSLCRC-GQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVL 317
P V + +++I +LCR G + +F EM GC+P++ T+ +L+ + GR ++
Sbjct: 153 PPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAK 212
Query: 318 QVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCI 377
++F +M +CA + Y LI C +N++EA++ L M KG+ PN T++S+ +
Sbjct: 213 KLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGL 272
Query: 378 AKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNV 437
K A ++ M C PN +TY L+ + + I ++L M+ ++P+
Sbjct: 273 CKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDA 332
Query: 438 NTYRILILMFCEKGHWNNAYKLMKEMV 464
Y +I FC + A + EM+
Sbjct: 333 GLYGKVISGFCAISKFREAANFLDEMI 359
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 155/317 (48%), Gaps = 14/317 (4%)
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVKDRFEP----DVILYTSLIHGWCRAGKIERAEEIFKD 252
S V+ + ++ E++ + FDS + D + ++ A K + AE++
Sbjct: 17 SQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVR 76
Query: 253 MKDAGIKPNVHTYSIVIDSLCRC-GQITRAHD---VFAEMIDAGCNPNAVTFNSLMRVHV 308
MK I+ V + I++ S+CR G++ R D VF +M D C+P+ + +++ + V
Sbjct: 77 MK---IENCVVSEDILL-SICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILV 132
Query: 309 KAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR-DENLEEAVKVLNLMVKKGVAPNS 367
+ + + + M+ N LI+ CR D ++ +K+ M K+G P+S
Sbjct: 133 EENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDS 192
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKE 427
T+ ++ + + ++ A +++ +M E +C P +TY L+ SK++D ++ +E
Sbjct: 193 YTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEE 252
Query: 428 MDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
M +EPNV TY L+ C+ G A +L EM+ + +PN+ Y ++ L K
Sbjct: 253 MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELF-EMMMARGCRPNMVTYTTLITGLCKEQ 311
Query: 488 QLKMHEELVEKMVARGF 504
+++ EL+++M +G
Sbjct: 312 KIQEAVELLDRMNLQGL 328
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 120/282 (42%), Gaps = 50/282 (17%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
D + M RG + + T+ LI R G EA F M + AP V + +
Sbjct: 174 DAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSL 233
Query: 200 VSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI 258
++ LC + +EA + + +K + EP+V Y+SL+ G C+ G+ +A E+F+ M G
Sbjct: 234 INGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGC 293
Query: 259 KPNVHTYSIVIDSLCRCGQITRAHDV---------------------------------- 284
+PN+ TY+ +I LC+ +I A ++
Sbjct: 294 RPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAAN 353
Query: 285 -FAEMIDAGCNPNAVTFNSLMRVHVK----------AGRTEKVLQVFNQMKRFNCAADTI 333
EMI G PN +T+N +HVK A + ++ M+ + +
Sbjct: 354 FLDEMILGGITPNRLTWN----IHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVE 409
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFG 375
L++C C+ ++AV++++ +V G P+ T+ + G
Sbjct: 410 TLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIG 451
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 9/211 (4%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
++ D A ++ MK++G+E T+S L+ + G + +A+ F M G P+ V
Sbjct: 241 KNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTY 300
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD 255
+ +++ LC++++ +EA D + +PD LY +I G+C K A +M
Sbjct: 301 TTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMIL 360
Query: 256 AGIKPNVHTYSI-------VIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHV 308
GI PN T++I V+ LC +RA ++ M G + T SL++
Sbjct: 361 GGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLC 419
Query: 309 KAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
K G +K +Q+ +++ C + LI
Sbjct: 420 KKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 3/306 (0%)
Query: 162 SVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK- 220
S L+R R +A+ M G PD + ++++ +LC+K A + +
Sbjct: 143 SNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSL 202
Query: 221 DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR-CGQIT 279
PDVI Y ++I G E+A +KD G P + TY+++++ +CR CG
Sbjct: 203 SGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGS-A 261
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
RA +V +M GC P+ VT+NSL+ + + G E+V V + +T+ YN L+
Sbjct: 262 RAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL 321
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
C E +E ++LN+M + P T+N + + K ++ A + +M E CL
Sbjct: 322 HSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCL 381
Query: 400 PNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKL 459
P+ +TYN ++ ++ +D ++L + P + TY +I +KG A +L
Sbjct: 382 PDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALEL 441
Query: 460 MKEMVE 465
+M++
Sbjct: 442 YHQMLD 447
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 169/370 (45%), Gaps = 2/370 (0%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV 194
++ D A ++ M G T++++I + G A+ M G PD +
Sbjct: 151 RIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVI 210
Query: 195 AVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
+ V+ + AE+A F+ D +++ P +I YT L+ CR RA E+ +DM
Sbjct: 211 TYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDM 270
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRT 313
G P++ TY+ +++ CR G + V ++ G N VT+N+L+
Sbjct: 271 AVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYW 330
Query: 314 EKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
++V ++ N M + + I YN LI C+ L A+ M+++ P+ T+N++
Sbjct: 331 DEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTV 390
Query: 374 FGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQV 433
G ++K V+ A + +K C P +TYN ++ A+ + L+L +M + +
Sbjct: 391 LGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGI 450
Query: 434 EPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHE 493
P+ T R LI FC A +++KE + Y V++ L K +++M
Sbjct: 451 FPDDITRRSLIYGFCRANLVEEAGQVLKE-TSNRGNGIRGSTYRLVIQGLCKKKEIEMAI 509
Query: 494 ELVEKMVARG 503
E+VE M+ G
Sbjct: 510 EVVEIMLTGG 519
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 145/303 (47%), Gaps = 11/303 (3%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV 219
T++VL+ R +A A+ M G PD V + +V+ CR+ EE S +
Sbjct: 246 TYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHI 305
Query: 220 KDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
E + + Y +L+H C + EEI M P V TY+I+I+ LC+ +
Sbjct: 306 LSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLL 365
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
+RA D F +M++ C P+ VT+N+++ K G + +++ +K C I YN +
Sbjct: 366 SRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSV 425
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNS-IFG-CIAKLHDVNGAHRMYAKMKEL 396
I+ + +++A+++ + M+ G+ P+ T S I+G C A L + G +KE
Sbjct: 426 IDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQ-----VLKET 480
Query: 397 NCLPNTL---TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHW 453
+ N + TY ++++ + K I+M +++ + M +P+ Y ++ E G
Sbjct: 481 SNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMG 540
Query: 454 NNA 456
+ A
Sbjct: 541 SEA 543
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 149/348 (42%), Gaps = 12/348 (3%)
Query: 71 LEFSRLSAAHP--ISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKN-FPSSPEPYI 127
LE LS + P I+ +T R + G I F W L+N P Y
Sbjct: 197 LEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRF--------WKDQLQNGCPPFMITYT 248
Query: 128 EMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDY 187
+++L + A +++ M G T++ L+ R G E + +
Sbjct: 249 VLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSH 308
Query: 188 GVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERA 246
G+ + V + ++ SLC +E + + + + + P VI Y LI+G C+A + RA
Sbjct: 309 GLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRA 368
Query: 247 EEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRV 306
+ F M + P++ TY+ V+ ++ + G + A ++ + + C P +T+NS++
Sbjct: 369 IDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDG 428
Query: 307 HVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPN 366
K G +K L++++QM D I LI CR +EEA +VL +G
Sbjct: 429 LAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIR 488
Query: 367 SSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
ST+ + + K ++ A + M C P+ Y +++ E
Sbjct: 489 GSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEE 536
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 111/256 (43%), Gaps = 36/256 (14%)
Query: 231 TSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMID 290
++L+ G R ++++A I + M +G P+ TY+++I +LC+ G I A + +M
Sbjct: 143 SNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSL 202
Query: 291 AGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEE 350
+G P+ +T+N+++R G E+ ++ + + C I Y L+E CR
Sbjct: 203 SGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR 262
Query: 351 AVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMR 410
A++VL M +G C P+ +TYN L+
Sbjct: 263 AIEVLEDMAVEG-----------------------------------CYPDIVTYNSLVN 287
Query: 411 MFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLK 470
+++ V + + + + +E N TY L+ C +W+ +++ M + S
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMY-QTSYC 346
Query: 471 PNLQVYENVLELLRKA 486
P + Y ++ L KA
Sbjct: 347 PTVITYNILINGLCKA 362
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 166/350 (47%), Gaps = 3/350 (0%)
Query: 143 WHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSS 202
W + + M +GV+ + + F L++ + GL EA+ ME G+ + + + ++ +
Sbjct: 329 WEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDA 388
Query: 203 LCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPN 261
+ EE + F ++D+ +P Y L+ + R + + E + ++M+D G++PN
Sbjct: 389 YNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPN 448
Query: 262 VHTYSIVIDSLCRCGQITR-AHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
V +Y+ +I + R +++ A D F M G P++ ++ +L+ + +G EK F
Sbjct: 449 VKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASF 508
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+M + Y +++ R + + +++ LM+++ + T+N++ AK
Sbjct: 509 EEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQ 568
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
A + ++ ++ P+ +TYN+LM +A + +L KEM ++P+ TY
Sbjct: 569 GLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITY 628
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK 490
+I F + A+ K MV+ + P+ + YE + +L + K
Sbjct: 629 STMIYAFVRVRDFKRAFFYHKMMVKSGQV-PDPRSYEKLRAILEDKAKTK 677
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 166/378 (43%), Gaps = 10/378 (2%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAV-HAFNRMEDYGVAPDKVA 195
+ +D AW + ++M V T ++LI +AG +A+ V F +M + GV +
Sbjct: 287 QRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDV 346
Query: 196 VSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMK 254
+V S C + EEA + K + I+Y +L+ + ++ IE E +F +M+
Sbjct: 347 FGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMR 406
Query: 255 DAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTE 314
D G+KP+ TY+I++D+ R Q + EM D G PN ++ L+ + GRT+
Sbjct: 407 DKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAY---GRTK 463
Query: 315 KV----LQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
K+ F +MK+ + Y LI + E+A M K+G+ P+ T+
Sbjct: 464 KMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETY 523
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE 430
S+ + D ++ M +TYN L+ FA+ + E +
Sbjct: 524 TSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSK 583
Query: 431 NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK 490
++P+V TY +L+ + G +L+KEM +LKP+ Y ++ + K
Sbjct: 584 MGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMA-ALNLKPDSITYSTMIYAFVRVRDFK 642
Query: 491 MHEELVEKMVARGFVSRP 508
+ MV G V P
Sbjct: 643 RAFFYHKMMVKSGQVPDP 660
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 151/296 (51%), Gaps = 4/296 (1%)
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDSVKDRFE-PDVILYTSLIHGWCRAGKIERAEEIFKDM 253
A S++ + L R+R A+ ++ D+ E DV LY + I G + + + A E+++ M
Sbjct: 240 ACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAM 299
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITR-AHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGR 312
+ P+ T +I+I +L + G+ + ++F +M + G + F L++ G
Sbjct: 300 DKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGL 359
Query: 313 TEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNS 372
E+ L + +M++ ++TI YN L++ + + ++EE + M KG+ P+++T+N
Sbjct: 360 KEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNI 419
Query: 373 IFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSI-DMVLKLKKEMDEN 431
+ A+ + + +M++L PN +Y L+ + +K + DM M +
Sbjct: 420 LMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKV 479
Query: 432 QVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
++P+ ++Y LI + G AY +EM +E +KP+++ Y +VL+ R++G
Sbjct: 480 GLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKE-GIKPSVETYTSVLDAFRRSG 534
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 129/286 (45%), Gaps = 39/286 (13%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNR-M 184
Y ++D K H + L M+ +G++ +A T+++L+ Y R + + V R M
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARR-MQPDIVETLLREM 440
Query: 185 EDYGVAPDKVAVSIVVSSLCRKRRAEE--AQSFFDSVKDRFEPDVILYTSLIHGWCRAGK 242
ED G+ P+ + + ++S+ R ++ + A +F K +P YT+LIH + +G
Sbjct: 441 EDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGW 500
Query: 243 IERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITR---------------------- 280
E+A F++M GIKP+V TY+ V+D+ R G +
Sbjct: 501 HEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNT 560
Query: 281 -------------AHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFN 327
A DV +E G P+ +T+N LM + + G+ K+ Q+ +M N
Sbjct: 561 LLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALN 620
Query: 328 CAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
D+I Y+ +I R + + A +MVK G P+ ++ +
Sbjct: 621 LKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 193/413 (46%), Gaps = 22/413 (5%)
Query: 106 SLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLI 165
+L FF W + +++M+ + G++ + A ++ M +GV + F VLI
Sbjct: 133 ALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLI 192
Query: 166 RRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFE 224
Y +AG+ E+V F +M+D GV + + + + R+ R A+ +F+ V + E
Sbjct: 193 ESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVE 252
Query: 225 PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDV 284
P Y ++ G+ + ++E A F+DMK GI P+ T++ +I+ CR ++ A +
Sbjct: 253 PTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKL 312
Query: 285 FAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
F EM P+ V++ ++++ ++ R + L++F +M+ + Y+ L+ C
Sbjct: 313 FVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCD 372
Query: 345 DENLEEAVKVLNLMVKKGVAP-NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
+ EA +L M+ K +AP ++S F + +K D+ A + M LN
Sbjct: 373 AGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAG 432
Query: 404 TYNILMRMFAESKSIDMVLKL-----KKEM-----DENQVEPNVNTYRILILMFCEKGHW 453
Y +L+ ++ + + +KL +KE+ D ++EP+ Y +I C G
Sbjct: 433 HYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSA--YNPIIEYLCNNGQT 490
Query: 454 NNAYKLMKEMVEEKSLKPNLQVYENVLELLR---KAGQLKMHEELVEKMVARG 503
A L +++ +K +Q + + L+R K G E+++ M RG
Sbjct: 491 AKAEVLFRQL-----MKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRG 538
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 156/372 (41%), Gaps = 39/372 (10%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
D + + M++ G+E A T+S L+ AG EA + M +AP SI
Sbjct: 342 DDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDN--SIF 399
Query: 200 VSSLCRKRRAEEAQSFFDSVKDRFEPDVIL----YTSLIHGWCRAGKIERA--------- 246
+ L + +A + + + +K +V Y LI C+A RA
Sbjct: 400 LKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIE 459
Query: 247 -EEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMR 305
E I + ++P+ Y+ +I+ LC GQ +A +F +++ G + N+L+R
Sbjct: 460 KEIILRHQDTLEMEPSA--YNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIR 516
Query: 306 VHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
H K G + ++ M R ++ Y LI+ + +A L+ MV+ G P
Sbjct: 517 GHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVP 576
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNC-------LPNTLTYNILMRMFAES--K 416
+SS F S+ + + V A R+ M + N L + +LMR E
Sbjct: 577 DSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALG 636
Query: 417 SIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVY 476
ID+ +++N ++++ L+ + EKG A KL+ + E+ L Y
Sbjct: 637 RIDL-------LNQNGHTADLDS---LLSVLSEKGKTIAALKLL-DFGLERDLSLEFSSY 685
Query: 477 ENVLELLRKAGQ 488
+ VL+ L AG+
Sbjct: 686 DKVLDALLGAGK 697
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 150/318 (47%), Gaps = 4/318 (1%)
Query: 108 AFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRR 167
FFNW S FP Y + R F L + M GVE+ T+S +I
Sbjct: 171 TFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITC 230
Query: 168 YVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFD-SVKDRFEPD 226
R L +A+ F RM G+ PD+V S ++ + + EE S ++ +V ++PD
Sbjct: 231 AKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPD 290
Query: 227 VILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFA 286
I ++ L + AG + + ++MK +KPNV Y+ +++++ R G+ A +F
Sbjct: 291 AIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFN 350
Query: 287 EMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDE 346
EM++AG PN T +L++++ KA LQ++ +MK D I YN L+ C D
Sbjct: 351 EMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN-MCADI 409
Query: 347 NLEEAVKVLNLMVKKGVA--PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
LEE + L +K+ V P++ ++ ++ A ++ +M + N +
Sbjct: 410 GLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMG 469
Query: 405 YNILMRMFAESKSIDMVL 422
L++ ++K ID V+
Sbjct: 470 CTCLVQCLGKAKRIDDVV 487
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 144/315 (45%), Gaps = 5/315 (1%)
Query: 191 PDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR--FEPDVILYTSLIHGWCRAGKIERAEE 248
P++ +V++SL R ++ +FF+ VK + F + I Y + + + EE
Sbjct: 151 PNRDNALLVLNSL---REWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEE 207
Query: 249 IFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHV 308
+ +M G++ + TYS +I RC +A + F M G P+ VT+++++ V+
Sbjct: 208 MALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYS 267
Query: 309 KAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSS 368
K+G+ E+VL ++ + D I ++ L + + + VL M V PN
Sbjct: 268 KSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVV 327
Query: 369 TFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEM 428
+N++ + + A ++ +M E PN T L++++ +++ L+L +EM
Sbjct: 328 VYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEM 387
Query: 429 DENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQ 488
+ + Y L+ M + G A +L +M E +P+ Y +L + G+
Sbjct: 388 KAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGK 447
Query: 489 LKMHEELVEKMVARG 503
+ EL E+M+ G
Sbjct: 448 AEKAMELFEEMLKAG 462
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 122/261 (46%), Gaps = 6/261 (2%)
Query: 216 FDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRC 275
+ VKD E D I Y+++I R +A E F+ M G+ P+ TYS ++D +
Sbjct: 210 LEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKS 269
Query: 276 GQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGY 335
G++ ++ + G P+A+ F+ L ++ +AG + + V +MK + + + Y
Sbjct: 270 GKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVY 329
Query: 336 NFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKE 395
N L+E R A + N M++ G+ PN T ++ K A +++ +MK
Sbjct: 330 NTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKA 389
Query: 396 LNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDEN-QVEPNVNTYRILILMFCEKGHWN 454
+ + YN L+ M A+ + +L +M E+ Q P+ +Y ++ ++ G
Sbjct: 390 KKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAE 449
Query: 455 NAYKLMKEMVEEKSLKPNLQV 475
A +L +EM LK +QV
Sbjct: 450 KAMELFEEM-----LKAGVQV 465
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 175/402 (43%), Gaps = 12/402 (2%)
Query: 99 HGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITA 158
H + + A FNWA +L F + ++ M FD + L+ + ++
Sbjct: 89 HPLYAHYDFAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSS 148
Query: 159 ETFSV---------LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV-SIVVSSLCRKRR 208
FS I Y RA A+ AF+ M+ V V + VV+ +
Sbjct: 149 GIFSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGD 208
Query: 209 AEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSI 267
++A F+ + K+R +PDV + LI+G+CR+ K + A ++F++MK+ G +PNV +++
Sbjct: 209 MDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNT 268
Query: 268 VIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFN 327
+I G+I + EMI+ GC + T L+ + GR + + +
Sbjct: 269 LIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKR 328
Query: 328 CAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAH 387
Y L+E C + A++++ + KKG P ++ + K A
Sbjct: 329 VLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKAS 388
Query: 388 RMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMF 447
KM LP+++T+N+L+R S +L+ EP+ TY +L+ F
Sbjct: 389 GFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGF 448
Query: 448 CEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQL 489
++G L+ EM+ +K + P++ Y +++ L G+
Sbjct: 449 TKEGRRKEGEVLVNEML-DKDMLPDIFTYNRLMDGLSCTGKF 489
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 6/240 (2%)
Query: 269 IDSLCRCGQITRA---HDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR 325
ID+ CR ++ A D +ID PN +N+++ +VK+G +K L+ + +M +
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGK 221
Query: 326 FNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNG 385
D +N LI +CR + A+ + M +KG PN +FN++ +
Sbjct: 222 ERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEE 281
Query: 386 AHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILIL 445
+M +M EL C + T IL+ +D L ++ +V P+ Y L+
Sbjct: 282 GVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVE 341
Query: 446 MFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
C + A ++M+E+ + K P ++E LRK+G+ + +EKM+ G +
Sbjct: 342 KLCGENKAVRAMEMMEELWK-KGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGIL 400
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A +++ + +G + L+ ++G +A +M + G+ PD V ++++
Sbjct: 352 AMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLR 411
Query: 202 SLCRKRRAEEAQSF-FDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
LC + +A + +EPD Y L+ G+ + G+ + E + +M D + P
Sbjct: 412 DLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLP 471
Query: 261 NVHTYSIVIDSLCRCGQITRAH 282
++ TY+ ++D L G+ +R
Sbjct: 472 DIFTYNRLMDGLSCTGKFSRKQ 493
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 184/400 (46%), Gaps = 4/400 (1%)
Query: 102 PFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETF 161
P +SL F + + S P + ++DL GK + A +L M GV I TF
Sbjct: 284 PIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTF 343
Query: 162 SVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-K 220
+ +I G +EA +ME+ G++PD +I++S E A ++ + K
Sbjct: 344 NTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRK 403
Query: 221 DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITR 280
PD + + +++H C+ + E + +M I+ + H+ +++ G + +
Sbjct: 404 VGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQ 463
Query: 281 AHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAA-DTIGYNFLI 339
A +F E C ++ T +++ V+ + G + VF + + D + YN +I
Sbjct: 464 AKALF-ERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMI 522
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
+ + + + E+A+ + M +G P+ T+NS+F +A + V+ A R+ A+M + C
Sbjct: 523 KAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCK 582
Query: 400 PNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKL 459
P TY ++ + + + L + M++ V+PN Y LI F E G A +
Sbjct: 583 PGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQY 642
Query: 460 MKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
+ M+EE ++ N V ++++ K G L+ + +KM
Sbjct: 643 FR-MMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM 681
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 159/334 (47%), Gaps = 3/334 (0%)
Query: 156 ITAETFSVLIRRYVRAGLAAEAVHAF-NRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQS 214
+++ T + +I Y GL EA F + G D + ++++ + + + E+A S
Sbjct: 477 LSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALS 536
Query: 215 FFDSVKDRFE-PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLC 273
F +K++ PD Y SL ++ A+ I +M D+G KP TY+ +I S
Sbjct: 537 LFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYV 596
Query: 274 RCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTI 333
R G ++ A D++ M G PN V + SL+ ++G E+ +Q F M+ ++ I
Sbjct: 597 RLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHI 656
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM 393
LI+ + + LEEA +V + M P+ + NS+ A L V+ A ++ +
Sbjct: 657 VLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNAL 716
Query: 394 KELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHW 453
+E + +++ +M ++ +D +++ +EM E+ + + ++ ++ + G
Sbjct: 717 REKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQL 775
Query: 454 NNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
+ +L EM+ E+ L + ++ + LL+K G
Sbjct: 776 SECCELFHEMLVERKLLLDWGTFKTLFTLLKKGG 809
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 161/367 (43%), Gaps = 22/367 (5%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
+I M + I + V+++ YV GL +A F R + ++ V+
Sbjct: 432 VIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQ-LDCVLSSTTLAAVIDVYA 490
Query: 205 RKRRAEEAQSFFDSVKDRFEP--DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNV 262
K EA++ F ++ DV+ Y +I + +A E+A +FK MK+ G P+
Sbjct: 491 EKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDE 550
Query: 263 HTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQ 322
TY+ + L + A + AEM+D+GC P T+ +++ +V+ G + ++
Sbjct: 551 CTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEA 610
Query: 323 MKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHD 382
M++ + + Y LI +EEA++ +M + GV N S+ +K+
Sbjct: 611 MEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGC 670
Query: 383 VNGAHRMYAKMKELNCLPNTLTYNILMRMFA------ESKSIDMVLKLKKEMDENQVEPN 436
+ A R+Y KMK+ P+ N ++ + A E++SI L+ K D
Sbjct: 671 LEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCD------- 723
Query: 437 VNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK-----M 491
V ++ ++ ++ G + A ++ +EM E L + + V+ GQL
Sbjct: 724 VISFATMMYLYKGMGMLDEAIEVAEEM-RESGLLSDCTSFNQVMACYAADGQLSECCELF 782
Query: 492 HEELVEK 498
HE LVE+
Sbjct: 783 HEMLVER 789
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 142/330 (43%), Gaps = 27/330 (8%)
Query: 127 IEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMED 186
+ L AGK L W M GV T T+ +L+ Y +AGL EA+ M
Sbjct: 152 LRALGRAGKWDELRLCWI---EMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQ 208
Query: 187 YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERA 246
PD+V ++ VV + A FF GWC AGK++
Sbjct: 209 RMHFPDEVTMATVVRVFKNSGEFDRADRFF------------------KGWC-AGKVDLD 249
Query: 247 EEIFKDM-KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPN----AVTFN 301
+ D K+ + V+ + L + G + +P TFN
Sbjct: 250 LDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFN 309
Query: 302 SLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKK 361
+L+ ++ KAGR +F++M + DT+ +N +I +L EA +L M +K
Sbjct: 310 TLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEK 369
Query: 362 GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMV 421
G++P++ T+N + A D+ A Y K++++ P+T+T+ ++ + + K + V
Sbjct: 370 GISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEV 429
Query: 422 LKLKKEMDENQVEPNVNTYRILILMFCEKG 451
+ EMD N + + ++ +++ M+ +G
Sbjct: 430 EAVIAEMDRNSIRIDEHSVPVIMQMYVNEG 459
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/431 (18%), Positives = 178/431 (41%), Gaps = 76/431 (17%)
Query: 105 QSLAFFNWATSLKNFPSSPE--PYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFS 162
++L+ F +KN + P+ Y + + + D A ++ M G + +T++
Sbjct: 533 KALSLFK---GMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYA 589
Query: 163 VLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR 222
+I YVR GL ++AV + ME GV P++V +++ EEA +F +++
Sbjct: 590 AMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEH 649
Query: 223 -FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRA 281
+ + I+ TSLI + + G +E A ++ MKD+ P+V + ++ G ++ A
Sbjct: 650 GVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEA 709
Query: 282 HDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIEC 341
+F + + G + ++F ++M ++ G ++ ++V +M+ +D +N ++ C
Sbjct: 710 ESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMAC 768
Query: 342 HCRDENLEE-------------------AVKVLNLMVKKGVAPNSST------------- 369
+ D L E K L ++KKG P+ +
Sbjct: 769 YAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPL 828
Query: 370 -------------------------------------FNSIFGCIAKLHDVNGAHRMYAK 392
+N++ + D++ A + Y +
Sbjct: 829 ATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMR 888
Query: 393 MKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGH 452
M+E P+ +T L+ ++ ++ ++ V ++ + ++EP+ + ++ + +
Sbjct: 889 MQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANR 948
Query: 453 WNNAYKLMKEM 463
+ A + KEM
Sbjct: 949 QDLADVVKKEM 959
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 180/381 (47%), Gaps = 12/381 (3%)
Query: 104 YQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSV 163
YQ + F + ++PS Y ++ K R+FD ++ ++ R V F
Sbjct: 72 YQEMGFRH------DYPS----YSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMG 121
Query: 164 LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-R 222
LI+ Y +AG +A+ F+++ + +++ +++ L E+A+SFFD KD R
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
P+ + + LI G+ E A ++F +M + ++P+V TY+ +I LCR + +A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
+ +MI PNAVTF LM+ G + ++ M+ C + Y L+
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 343 CRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
+ ++EA +L M K+ + P+ +N + + V A+R+ +M+ C PN
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNA 361
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
TY +++ F + D L + M ++ P T+ ++ + G+ ++A ++ E
Sbjct: 362 ATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVL-E 420
Query: 463 MVEEKSLKPNLQVYENVLELL 483
++ +K+L ++N+L L
Sbjct: 421 VMGKKNLSFGSGAWQNLLSDL 441
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 145/307 (47%), Gaps = 2/307 (0%)
Query: 176 EAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLI 234
EA+ F++ ++ G D + S ++ L + R + V+ R L+ LI
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 235 HGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCN 294
+ +AG +++A ++F + + + + +I+ L G++ +A F D
Sbjct: 124 QHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 295 PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKV 354
PN+V+FN L++ + E +VF++M + YN LI CR++++ +A +
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
L M+KK + PN+ TF + + + N A ++ M+ C P + Y ILM +
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 415 SKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQ 474
ID L EM + +++P+V Y IL+ C + AY+++ EM + K KPN
Sbjct: 304 RGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEM-QMKGCKPNAA 362
Query: 475 VYENVLE 481
Y +++
Sbjct: 363 TYRMMID 369
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Query: 314 EKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
E+ L +F+Q + D Y+ LI + N + ++L L+ + V S F +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 374 FGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQV 433
K V+ A ++ K+ +C+ + N L+ + ++ ++ + ++
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 434 EPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHE 493
PN ++ ILI F +K W A K+ EM+E + ++P++ Y +++ L + + +
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEME-VQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 494 ELVEKMVAR 502
L+E M+ +
Sbjct: 242 SLLEDMIKK 250
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 178/399 (44%), Gaps = 7/399 (1%)
Query: 109 FFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRY 168
F LK + Y +D K LA SMK + TF+ LI Y
Sbjct: 149 FVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGY 208
Query: 169 VRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDV 227
+AG AV + M ++ + V + ++ C+K + A+ + V+DR EP+
Sbjct: 209 CKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNS 268
Query: 228 ILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAE 287
++YT++I G+ + G + A + M + G++ ++ Y ++I LC G++ A ++ +
Sbjct: 269 LVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVED 328
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDEN 347
M + P+ V F ++M + K+GR + + +++++ D + + +I+ ++
Sbjct: 329 MEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQ 388
Query: 348 LEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNI 407
L EA+ + ++K N + + + K D R+++K+ E +P+ Y
Sbjct: 389 LHEAI--VYFCIEK---ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTS 443
Query: 408 LMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEK 467
+ + ++ KLK M + + ++ Y LI KG A ++ EM+
Sbjct: 444 WIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNS- 502
Query: 468 SLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVS 506
+ P+ V++ ++ K G + +L+ M RG V+
Sbjct: 503 GISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVT 541
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/471 (19%), Positives = 202/471 (42%), Gaps = 40/471 (8%)
Query: 70 ALEF-SRLSAAHPI-SPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYI 127
AL+F SRL + + P T + I + GI SL F + S + + +
Sbjct: 5 ALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGI---LSLKFLAYLVS-RGYTPHRSSFN 60
Query: 128 EMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAG---LAAEAVHAFNRM 184
++ KL A ++ SM G E +++ LI + R G A+ + +
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 185 EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIE 244
+ PD V+ + + + + + +E + + P+V+ Y++ I +C++G+++
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A + F MK + PNV T++ +ID C+ G + A ++ EM + N VT+ +L+
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
K G ++ +++++M +++ Y +I+ + + + A+K L M+ +G+
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
+ + + I + + A + M++ + +P+ + + +M + +S + + +
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 425 KKEMDENQVEPNVNT------------------------------YRILILMFCEKGHWN 454
++ E EP+V Y +LI C++G +
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFI 420
Query: 455 NAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
+L + + E L P+ +Y + + L K G L +L +MV G +
Sbjct: 421 EVERLFSK-ISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLL 470
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 153/321 (47%), Gaps = 1/321 (0%)
Query: 109 FFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRY 168
FF W+ + F + Y ++ + + + W L+D M G TA TF++LI
Sbjct: 135 FFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSC 194
Query: 169 VRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDV 227
AGLA +AV F + + + P K + + +++SL ++ + + + ++D F PDV
Sbjct: 195 GEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDV 254
Query: 228 ILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAE 287
+ Y L+ R GK++R + +F +M G P+ +TY+I++ L + + A
Sbjct: 255 LTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNH 314
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDEN 347
M + G +P+ + + +L+ +AG E ++M + C D + Y +I +
Sbjct: 315 MKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGE 374
Query: 348 LEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNI 407
L++A ++ M KG PN T+NS+ + + A + +M+ C PN + Y+
Sbjct: 375 LDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYST 434
Query: 408 LMRMFAESKSIDMVLKLKKEM 428
L+ ++ + K+ +EM
Sbjct: 435 LVSYLRKAGKLSEARKVIREM 455
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 140/285 (49%), Gaps = 1/285 (0%)
Query: 219 VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
V+D F + LI AG ++A F K +P H+Y+ +++SL Q
Sbjct: 176 VQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQY 235
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
V+ +M++ G +P+ +T+N L+ + + G+ ++ ++F++M R + D+ YN L
Sbjct: 236 KLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNIL 295
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNC 398
+ + A+ LN M + G+ P+ + ++ +++ ++ +M + C
Sbjct: 296 LHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGC 355
Query: 399 LPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYK 458
P+ + Y +++ + S +D ++ +EM PNV TY +I C G + A
Sbjct: 356 RPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACW 415
Query: 459 LMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
L+KEM E + PN VY ++ LRKAG+L +++ +MV +G
Sbjct: 416 LLKEM-ESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 16/287 (5%)
Query: 84 PSTARR---VIEKCG----AIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKL 136
P+TAR +I CG A + + F +S F N+ Y +L+ +
Sbjct: 181 PTTARTFNLLICSCGEAGLAKQAVVQFMKSKTF--------NYRPFKHSYNAILNSLLGV 232
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
+ + L + M G T+++L+ R G F+ M G +PD
Sbjct: 233 KQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTY 292
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD 255
+I++ L + + A + + +K+ +P V+ YT+LI G RAG +E + +M
Sbjct: 293 NILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVK 352
Query: 256 AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEK 315
AG +P+V Y+++I G++ +A ++F EM G PN T+NS++R AG +
Sbjct: 353 AGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFRE 412
Query: 316 VLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKG 362
+ +M+ C + + Y+ L+ + L EA KV+ MVKKG
Sbjct: 413 ACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 160/333 (48%), Gaps = 4/333 (1%)
Query: 155 EITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQS 214
EI S +I Y G +EA + ++ GV D++ SIVV + EEA S
Sbjct: 555 EINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACS 614
Query: 215 FFDSVKDRFE--PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSL 272
+ + ++ + PDV L+ ++ + + ++ + ++ ++ +GI N Y+ VI+
Sbjct: 615 VLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCC 674
Query: 273 CRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADT 332
R + F EMI G PN VTFN L+ V+ KA +KV ++F KR + D
Sbjct: 675 ARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKR-HGVVDV 733
Query: 333 IGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAK 392
I YN +I + ++++ + M G + + +N++ K + + +
Sbjct: 734 ISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKR 793
Query: 393 MKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGH 452
MK+ P+ TYNI++ ++ E ID V + KE+ E+ + P++ +Y LI + G
Sbjct: 794 MKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGM 853
Query: 453 WNNAYKLMKEMVEEKSLKPNLQVYENVLELLRK 485
A L+KEM +++ P+ Y N++ LR+
Sbjct: 854 VEEAVGLVKEM-RGRNIIPDKVTYTNLVTALRR 885
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 184/418 (44%), Gaps = 39/418 (9%)
Query: 125 PYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRM 184
Y M+ + +LR +D A +ID MK V + E + V++ Y + G A M
Sbjct: 281 AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM 340
Query: 185 EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKI 243
E G +P+ +A + +++ + + E AQ F + + EPD Y S+I GW RA
Sbjct: 341 EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNY 400
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNP-------- 295
E A+ ++++K G KPN +I+ + G A +M GC
Sbjct: 401 EEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIIL 460
Query: 296 --------------------------NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCA 329
N +F+SL+ +VK G + L + + K + A
Sbjct: 461 QAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSA 520
Query: 330 ADTIGYNFLIECHCRDEN-LEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHR 388
++ Y+ LI C C++ L +AVK+ N ++ N +++ + + + A +
Sbjct: 521 FESHLYHLLI-CSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEK 579
Query: 389 MYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQ-VEPNVNTYRILILMF 447
+Y +K + + + ++I++RM+ ++ S++ + + MDE + + P+V +R ++ ++
Sbjct: 580 LYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIY 639
Query: 448 CEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
+K + + + + + + N ++Y V+ +A L E+M+ GF
Sbjct: 640 -QKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFT 696
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 162/358 (45%), Gaps = 2/358 (0%)
Query: 106 SLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSM-KTRGVEITAETFSVL 164
++ FF+W + Y +L + G+ +D A LI + + + + F+ +
Sbjct: 157 AIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTV 216
Query: 165 IRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFE 224
I + G A F+ M ++GV P+ + +++ + EEA+ F ++
Sbjct: 217 IYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGI 276
Query: 225 PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDV 284
Y+S+I + R ++AEE+ MK ++ + + +++++ + G++ A +
Sbjct: 277 VCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESI 336
Query: 285 FAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
M AG +PN + +N+L+ + K + E +F+++ D Y +IE R
Sbjct: 337 LVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGR 396
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
+N EEA + + G PNS ++ AK D +GA + M + C +++
Sbjct: 397 ADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSIL 456
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
I+++ + + ID+V + K N + N ++ L++ + + G ++ L++E
Sbjct: 457 -GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLRE 513
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 111/253 (43%), Gaps = 2/253 (0%)
Query: 123 PEPYI--EMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHA 180
P+ Y+ +ML + K D HL ++ G+ E ++ +I RA E
Sbjct: 627 PDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGT 686
Query: 181 FNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRA 240
F M YG P+ V ++++ + + ++ F K DVI Y ++I + +
Sbjct: 687 FEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKN 746
Query: 241 GKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTF 300
K+M+ G ++ Y+ ++D+ + Q+ + + M + P+ T+
Sbjct: 747 KDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTY 806
Query: 301 NSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVK 360
N ++ ++ + G ++V V ++K D YN LI+ + +EEAV ++ M
Sbjct: 807 NIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRG 866
Query: 361 KGVAPNSSTFNSI 373
+ + P+ T+ ++
Sbjct: 867 RNIIPDKVTYTNL 879
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 102/205 (49%), Gaps = 2/205 (0%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV 219
TF+VL+ Y +A L + F + +GV D ++ + ++++ + + S ++
Sbjct: 701 TFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSAIKNM 759
Query: 220 K-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
+ D F + Y +L+ + + ++E+ I K MK + P+ +TY+I+I+ G I
Sbjct: 760 QFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWI 819
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
DV E+ ++G P+ ++N+L++ + G E+ + + +M+ N D + Y L
Sbjct: 820 DEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNL 879
Query: 339 IECHCRDENLEEAVKVLNLMVKKGV 363
+ R++ EA+K M + G+
Sbjct: 880 VTALRRNDEFLEAIKWSLWMKQMGI 904
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 172/360 (47%), Gaps = 2/360 (0%)
Query: 110 FNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYV 169
F++A+ NF S ++ ++ G+ R+F+L ++ ++ G +T E F+ LI+ Y
Sbjct: 71 FDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYA 130
Query: 170 RAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKR-RAEEAQSFFDSVK-DRFEPDV 227
A L + + F +M ++ P ++ ++ L R ++A F S + P+
Sbjct: 131 EAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNT 190
Query: 228 ILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAE 287
Y L+ +C + A ++F M + + P+V +Y I+I CR GQ+ A ++ +
Sbjct: 191 RSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDD 250
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDEN 347
M++ G P+ +++ +L+ + + + ++ +MK C D + YN +I CR++
Sbjct: 251 MLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDR 310
Query: 348 LEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNI 407
+A KVL+ M+ G +PNS ++ ++ G + + + +M P+ N
Sbjct: 311 AMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNC 370
Query: 408 LMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEK 467
L++ F ++ + + + +N + +T+ ++I + C + +++ V+E+
Sbjct: 371 LVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEE 430
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 1/236 (0%)
Query: 141 LAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVV 200
+A+ L M R V +++ +LI+ + R G A+ + M + G PD+++ + ++
Sbjct: 208 IAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLL 267
Query: 201 SSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIK 259
+SLCRK + EA +K + PD++ Y ++I G+CR + A ++ DM G
Sbjct: 268 NSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCS 327
Query: 260 PNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV 319
PN +Y +I LC G EMI G +P+ N L++ G+ E+ V
Sbjct: 328 PNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDV 387
Query: 320 FNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFG 375
+ + + + +I C ++ E+ L VK+ + ++ + G
Sbjct: 388 VEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGIG 443
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 116/278 (41%), Gaps = 39/278 (14%)
Query: 229 LYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLC-RCGQITRAHDVFAE 287
++T LI + A E+ F M + P + ++D L G + +A ++F
Sbjct: 121 IFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKS 180
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDEN 347
G PN ++N LM+ Q+F +M + D Y LI+ CR
Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 348 LEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNI 407
+ A+++L+ M+ KG P+ ++ ++ + + + A+++ +MK C P+ + YN
Sbjct: 241 VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNT 300
Query: 408 LMRMFA-ESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEE 466
++ F E +++D K+ +M N PN +YR LI C++G ++ K +
Sbjct: 301 MILGFCREDRAMD-ARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYL------ 353
Query: 467 KSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
E+M+++GF
Sbjct: 354 ------------------------------EEMISKGF 361
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 164/353 (46%), Gaps = 8/353 (2%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV 219
TF++LI Y +++ + G PD V V+ V+ LC + R EA + V
Sbjct: 250 TFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERV 309
Query: 220 KDRF-EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
+ + + DV+ +L+ G+C GK+ A+ F +M+ G PNV TY+++I C G +
Sbjct: 310 ESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGML 369
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNC--AADTIGYN 336
A D F +M N TFN+L+R GRT+ L++ M+ + A YN
Sbjct: 370 DSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYN 429
Query: 337 FLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGC-IAKLHDVNGAHRMYAKMKE 395
+I ++ E+A++ L M K +F I C + D+ A Y +M
Sbjct: 430 CVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTA---YDQMIG 486
Query: 396 LNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNN 455
+P+ + + L+ +++ I+ L+L +M P +T+ +I+ FC++ N
Sbjct: 487 EGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMN 546
Query: 456 AYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVSRP 508
K +++M E + P+ + Y +LE L G ++ L +MV + V P
Sbjct: 547 GIKFVEDMAERGCV-PDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDP 598
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 179/416 (43%), Gaps = 28/416 (6%)
Query: 106 SLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSM-KTRGVEITAETFSVL 164
+L F WA++ F S Y + R FD + L+D M + G+ F +
Sbjct: 59 ALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTI 118
Query: 165 IRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS--VKDR 222
IR + RA L + + + +G+ P + ++ L K + A+ FF +
Sbjct: 119 IRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLV-KEDIDIAREFFTRKMMASG 177
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
DV Y L+ G +I ++ + MK +G+ PN Y+ ++ +LC+ G++ RA
Sbjct: 178 IHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRAR 237
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
+ +EM + PN VTFN L+ + + + + + + D + ++E
Sbjct: 238 SLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVL 293
Query: 343 CRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
C + + EA++VL + KG + N++ L + A R + +M+ LPN
Sbjct: 294 CNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNV 353
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
TYN+L+ + + +D L +M + + N T+ LI G ++ K+++
Sbjct: 354 ETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEM 413
Query: 463 MVEEKSLKP------NLQVY--------ENVLELLRKAGQLKMHEELVEKMVARGF 504
M + ++ N +Y E+ LE L LKM E+L + V R F
Sbjct: 414 MQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFL-----LKM-EKLFPRAVDRSF 463
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 130/313 (41%), Gaps = 38/313 (12%)
Query: 172 GLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILY 230
G +EA+ R+E G D VA + +V C + AQ FF ++ + + P+V Y
Sbjct: 297 GRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETY 356
Query: 231 TSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMID 290
LI G+C G ++ A + F DMK I+ N T++ +I L G+ + M D
Sbjct: 357 NLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQD 416
Query: 291 AGCNPNAVT--FNSLMRVHVKAGRTEKVLQVFNQMKRF---------------------- 326
+ A +N ++ K R E L+ +M++
Sbjct: 417 SDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDD 476
Query: 327 -NCAADTI----GYNFLIECHC------RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFG 375
A D + G +I HC + +EE+++++N MV +G P SSTFN++
Sbjct: 477 LKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVII 536
Query: 376 CIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEP 435
K V + M E C+P+T +YN L+ I L M E + P
Sbjct: 537 GFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVP 596
Query: 436 NVNTYRILILMFC 448
+ + + LMFC
Sbjct: 597 DPSMWS--SLMFC 607
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 131/292 (44%), Gaps = 16/292 (5%)
Query: 134 GKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDK 193
GK+R +A M+ +G ET+++LI Y G+ A+ FN M+ + +
Sbjct: 332 GKMR---VAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNF 388
Query: 194 VAVSIVVSSLCRKRRAEEAQSFFDSVKD-------RFEPDVILYTSLIHGWCRAGKIERA 246
+ ++ L R ++ + ++D R +P Y +I+G+ + + E A
Sbjct: 389 ATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP----YNCVIYGFYKENRWEDA 444
Query: 247 EEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRV 306
E M+ + P S + SLC G + + +MI G P+ + + L+
Sbjct: 445 LEFLLKMEK--LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHR 502
Query: 307 HVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPN 366
+ + G+ E+ L++ N M + +N +I C+ + + +K + M ++G P+
Sbjct: 503 YSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPD 562
Query: 367 SSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSI 418
+ ++N + + D+ A ++++M E + +P+ ++ LM ++ +I
Sbjct: 563 TESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAI 614
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 183/415 (44%), Gaps = 48/415 (11%)
Query: 129 MLDLAGKLRHFDLA------WHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFN 182
+L + K R F A W ++ V +++ T++ +I Y ++G EA F
Sbjct: 263 VLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFK 322
Query: 183 RMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGK 242
RM + G+ P V + ++ + E S ++K PD Y LI +
Sbjct: 323 RMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNND 382
Query: 243 IERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNS 302
IERA FK+MKD G+KP+ +Y ++ + + A + AEM D + T ++
Sbjct: 383 IERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSA 442
Query: 303 LMRVHVKAGRTEKVLQVFNQMKRFNCAAD------------------------------- 331
L R++V+A EK F KRF+ A +
Sbjct: 443 LTRMYVEAEMLEKSWSWF---KRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQE 499
Query: 332 -----TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGA 386
I YN +I+ + ++ E+A ++ M+ GV P+ T+N++ +A D+
Sbjct: 500 VNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILAS-ADMPHK 558
Query: 387 HRMY-AKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILIL 445
R Y KM+E + + + Y ++ F + ++M ++ KEM E +EP+V Y +LI
Sbjct: 559 GRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLIN 618
Query: 446 MFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
F + G+ A ++ M +E + N +Y ++++L K G L E + K++
Sbjct: 619 AFADTGNVQQAMSYVEAM-KEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLL 672
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 187/452 (41%), Gaps = 48/452 (10%)
Query: 92 EKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKT 151
E+ ++ I + +++ F W S + + Y ML + GK + L D M
Sbjct: 156 ERTIILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIR 215
Query: 152 RGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEE 211
+G++ T+ LI Y + GL A+ +M G+ PD+V IV+ + R ++
Sbjct: 216 KGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQK 275
Query: 212 AQSFFDSV---KDRFEPDVIL----YTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHT 264
A+ FF +++ + V L Y ++I + ++G+I+ A E FK M + GI P T
Sbjct: 276 AEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVT 335
Query: 265 YSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMK 324
++ +I GQ+ + M C P+ T+N L+ +H K E+ F +MK
Sbjct: 336 FNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMK 394
Query: 325 RFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI----------- 373
D + Y L+ +EEA ++ M V + T +++
Sbjct: 395 DDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLE 454
Query: 374 --FGCIAKLH--------------DVNG-------AHRMYAKMKELNCLPNTLTYNILMR 410
+ + H D G A R++ +E+N + YN++++
Sbjct: 455 KSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIK 513
Query: 411 MFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL--ILMFCEKGHWNNAYKLMKEMVEEKS 468
+ SKS + +L + M V P+ TY L IL + H Y E + E
Sbjct: 514 AYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCY---LEKMRETG 570
Query: 469 LKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
+ Y V+ K GQL M EE+ ++MV
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMV 602
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 181/433 (41%), Gaps = 47/433 (10%)
Query: 116 LKNFPSSPEPY-IEMLDLAGKLRHF-DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGL 173
+K+ P+P L A +RH + A LI M VEI T S L R YV A +
Sbjct: 393 MKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEM 452
Query: 174 AAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSL 233
++ F R G + S + + + EA+ F ++ + VI Y +
Sbjct: 453 LEKSWSWFKRFHVAGNMSSE-GYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVM 511
Query: 234 IHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSI-------------------------- 267
I + + E+A E+F+ M G+ P+ TY+
Sbjct: 512 IKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGY 571
Query: 268 ---------VIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
VI S + GQ+ A +V+ EM++ P+ V + L+ G ++ +
Sbjct: 572 VSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMS 631
Query: 319 VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVK---KGVAPNSSTFNSIFG 375
MK +++ YN LI+ + + L+EA + +++ K P+ T N +
Sbjct: 632 YVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMIN 691
Query: 376 CIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEP 435
++ V A ++ MK+ N T+ +++ M+ ++ + ++ K+M E ++
Sbjct: 692 LYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILT 750
Query: 436 NVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMH--- 492
+ +Y ++ +F G + A + KEMV ++P+ ++++ +L K G K
Sbjct: 751 DPLSYNSVLGLFALDGRFKEAVETFKEMV-SSGIQPDDSTFKSLGTILMKLGMSKKAVRK 809
Query: 493 -EELVEKMVARGF 504
EE+ +K + RG
Sbjct: 810 IEEIRKKEIKRGL 822
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 166/349 (47%), Gaps = 6/349 (1%)
Query: 118 NFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEA 177
+F SP Y ++++ GK + + A ++ +++ G +T++ L+ Y + G A
Sbjct: 748 HFACSP-MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERA 806
Query: 178 VHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD---RFEPDVILYTSLI 234
FN M G +P +++I++ +LC R EE + ++D + IL ++
Sbjct: 807 RAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILL--ML 864
Query: 235 HGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCN 294
+ RAG I ++I+ MK AG P + Y ++I+ LC+ ++ A + +EM +A
Sbjct: 865 DAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFK 924
Query: 295 PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKV 354
+NS+++++ +K +QV+ ++K D YN LI +CRD EE +
Sbjct: 925 VELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLL 984
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
+ M G+ P T+ S+ K + A +++ ++ + Y+ +M++ +
Sbjct: 985 MQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRD 1044
Query: 415 SKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
S S KL + M +EP + T +L++ + G+ A K++ +
Sbjct: 1045 SGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNL 1093
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 165/345 (47%), Gaps = 6/345 (1%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y +L + + D A + + M+ + T++ +I Y R GLAAEA F +E
Sbjct: 300 YNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELE 359
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIE 244
G PD V + ++ + R+R E+ + + + K F D + Y ++IH + + G+++
Sbjct: 360 LKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLD 419
Query: 245 RAEEIFKDMKD-AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
A +++KDMK +G P+ TY+++IDSL + + A + +EM+D G P T+++L
Sbjct: 420 LALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSAL 479
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
+ + KAG+ E+ F+ M R D + Y+ +++ R +A + M+ G
Sbjct: 480 ICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGH 539
Query: 364 APNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLK 423
P+ + + + + K + + + M+EL C N L + + + + D+ +
Sbjct: 540 TPSYTLYELMILGLMKENRSDDIQKTIRDMEEL-CGMNPLE---ISSVLVKGECFDLAAR 595
Query: 424 LKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
K N E +T ++ + G + A++L++ + E S
Sbjct: 596 QLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHAS 640
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 158/319 (49%), Gaps = 8/319 (2%)
Query: 190 APDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEI 249
+P+ V+ ++ L R + A F + V +Y +++ + R+GK +A+E+
Sbjct: 188 SPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQEL 247
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMID----AGCNPNAVTFNSLMR 305
M+ G P++ +++ +I++ + G +T ++ E++D +G P+A+T+N+L+
Sbjct: 248 VDAMRQRGCVPDLISFNTLINARLKSGGLT--PNLAVELLDMVRNSGLRPDAITYNTLLS 305
Query: 306 VHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
+ + ++VF M+ C D YN +I + R EA ++ + KG P
Sbjct: 306 ACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFP 365
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLK 425
++ T+NS+ A+ + +Y +M+++ + +TYN ++ M+ + +D+ L+L
Sbjct: 366 DAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLY 425
Query: 426 KEMDE-NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
K+M + P+ TY +LI + A LM EM+ + +KP LQ Y ++
Sbjct: 426 KDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML-DVGIKPTLQTYSALICGYA 484
Query: 485 KAGQLKMHEELVEKMVARG 503
KAG+ + E+ M+ G
Sbjct: 485 KAGKREEAEDTFSCMLRSG 503
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 157/325 (48%), Gaps = 9/325 (2%)
Query: 159 ETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEE--AQSFF 216
+ ++ ++ Y R+G ++A + M G PD ++ + ++++ + A
Sbjct: 226 QVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL 285
Query: 217 DSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRC 275
D V++ PD I Y +L+ R ++ A ++F+DM+ +P++ TY+ +I RC
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 276 GQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGY 335
G A +F E+ G P+AVT+NSL+ + TEKV +V+ QM++ D + Y
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 336 NFLIECHCRDENLEEAVKVLNLMVKKGVA---PNSSTFNSIFGCIAKLHDVNGAHRMYAK 392
N +I + + L+ A+++ M KG++ P++ T+ + + K + A + ++
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDM--KGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 393 MKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGH 452
M ++ P TY+ L+ +A++ + M + +P+ Y +++ +
Sbjct: 464 MLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNE 523
Query: 453 WNNAYKLMKEMVEEKSLKPNLQVYE 477
A+ L ++M+ + P+ +YE
Sbjct: 524 TRKAWGLYRDMISDGH-TPSYTLYE 547
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 130/276 (47%), Gaps = 1/276 (0%)
Query: 229 LYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM 288
+YT +I + + ++AE + +++ +G P++ T++ ++ + +CG RA +F M
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 289 IDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL 348
+ G +P + N L+ GR E++ V +++ +++ R N+
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 349 EEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNIL 408
E K+ + M G P + + + K V A M ++M+E N +N +
Sbjct: 874 FEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSM 933
Query: 409 MRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
++M+ + +++ + + E +EP+ TY LI+M+C Y LM++M
Sbjct: 934 LKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM-RNLG 992
Query: 469 LKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
L P L Y++++ K L+ E+L E+++++G
Sbjct: 993 LDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGL 1028
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/377 (18%), Positives = 157/377 (41%), Gaps = 58/377 (15%)
Query: 93 KCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLA-------GKLRHFDLAWHL 145
+CG + ++ A FN T +++ PS P +E +++ G+L + +
Sbjct: 799 QCGC------YERARAIFN--TMMRDGPS---PTVESINILLHALCVDGRLEEL---YVV 844
Query: 146 IDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCR 205
++ ++ G +I+ + +++ + RAG E ++ M+ G P +++ LC+
Sbjct: 845 VEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCK 904
Query: 206 KRRAEEAQ----------------------SFFDSVKD--------------RFEPDVIL 229
+R +A+ + +++D EPD
Sbjct: 905 GKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETT 964
Query: 230 YTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMI 289
Y +LI +CR + E + + M++ G+ P + TY +I + + + +A +F E++
Sbjct: 965 YNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELL 1024
Query: 290 DAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLE 349
G + ++++M++ +G K ++ MK + L+ + N +
Sbjct: 1025 SKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQ 1084
Query: 350 EAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILM 409
EA KVL+ + V + ++S+ + D N +MK+ P+ + +
Sbjct: 1085 EAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFV 1144
Query: 410 RMFAESKS-IDMVLKLK 425
R + SK I+++L LK
Sbjct: 1145 RAASFSKEKIEVMLLLK 1161
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 147/372 (39%), Gaps = 44/372 (11%)
Query: 139 FDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSI 198
FDLA + T G E+ +T ++ Y +G +EA ++++ ++
Sbjct: 590 FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEA 649
Query: 199 VVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI 258
++ C+ A D + D +HGWC
Sbjct: 650 LIVLHCKVNNLSAAL-------DEYFAD-----PCVHGWCFGS----------------- 680
Query: 259 KPNVHTYSIVIDSLCRC----GQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTE 314
S + ++L C A VF+++ +GC + S++ V+ K G E
Sbjct: 681 -------STMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPE 733
Query: 315 KVLQVFNQ--MKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNS 372
QV NQ K F+ A + Y +IE + + + ++A V+ + + G P+ T+NS
Sbjct: 734 TAHQVVNQAETKGFHFACSPM-YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNS 792
Query: 373 IFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQ 432
+ A+ A ++ M P + NIL+ ++ + + +E+ +
Sbjct: 793 LMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMG 852
Query: 433 VEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMH 492
+ + ++ +++ F G+ K+ M L P +++Y ++ELL K +++
Sbjct: 853 FKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYL-PTIRLYRMMIELLCKGKRVRDA 911
Query: 493 EELVEKMVARGF 504
E +V +M F
Sbjct: 912 EIMVSEMEEANF 923
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 150/335 (44%), Gaps = 35/335 (10%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A +D M +G+++ S++++ Y + + EA+ F D + D+V ++
Sbjct: 337 ALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFD 396
Query: 202 SLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
+L + R EEA +KDR PDVI YT+LI G+C GK+ A ++ +M G+ P
Sbjct: 397 ALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSP 456
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVT--------------------F 300
++ TY++++ L R G +++ M G PNAVT F
Sbjct: 457 DLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFF 516
Query: 301 NSL-----------MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLE 349
+SL ++ + +AG ++K + F R Y L C + LE
Sbjct: 517 SSLEQKCPENKASFVKGYCEAGLSKKAYKAF---VRLEYPLRKSVYIKLFFSLCIEGYLE 573
Query: 350 EAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILM 409
+A VL M V P S + G KL++V A ++ M E +P+ TY I++
Sbjct: 574 KAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMI 633
Query: 410 RMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILI 444
+ + L ++M + ++P+V TY +L+
Sbjct: 634 HTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 171/367 (46%), Gaps = 17/367 (4%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A +I M+ G + +I RY + EA+ ++M G+ + V VS+++
Sbjct: 302 AESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQ 361
Query: 202 SLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
C+ EA F +D D + Y + G++E A E+ ++MKD GI P
Sbjct: 362 CYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVP 421
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+V Y+ +ID C G++ A D+ EMI G +P+ +T+N L+ + G E+VL+++
Sbjct: 422 DVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIY 481
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+MK + + + +IE C ++EA + + +K N ++F + C A L
Sbjct: 482 ERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK-CPENKASFVKGY-CEAGL 539
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLK----LKKEMDENQVEPN 436
A++ + + L L ++ +++F S I+ L+ + K+M +VEP
Sbjct: 540 S--KKAYKAFVR------LEYPLRKSVYIKLFF-SLCIEGYLEKAHDVLKKMSAYRVEPG 590
Query: 437 VNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELV 496
+ +I FC+ + A L MV E+ L P+L Y ++ + +L+ E L
Sbjct: 591 RSMCGKMIGAFCKLNNVREAQVLFDTMV-ERGLIPDLFTYTIMIHTYCRLNELQKAESLF 649
Query: 497 EKMVARG 503
E M RG
Sbjct: 650 EDMKQRG 656
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 166/395 (42%), Gaps = 26/395 (6%)
Query: 82 ISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDL 141
+ + A + K G + Q + + N+ + + Y L GK+
Sbjct: 389 VCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYC----LQGKVVD--- 441
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A LID M G+ T++VL+ R G E + + RM+ G P+ V S+++
Sbjct: 442 ALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIE 501
Query: 202 SLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPN 261
LC R+ +EA+ FF S++ + + S + G+C AG ++A + F + + ++ +
Sbjct: 502 GLCFARKVKEAEDFFSSLEQKCPEN---KASFVKGYCEAGLSKKAYKAFVRL-EYPLRKS 557
Query: 262 VHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFN 321
V Y + SLC G + +AHDV +M P ++ K + +F+
Sbjct: 558 V--YIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFD 615
Query: 322 QMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL- 380
M D Y +I +CR L++A + M ++G+ P+ T+ + KL
Sbjct: 616 TMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLD 675
Query: 381 ---HDVNGAHRMYAKMKELNCLP---------NTLTYNILMRMFAESKSIDMVLKLKKEM 428
H+ K K L + + Y +L+ + +++ +L M
Sbjct: 676 PEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRM 735
Query: 429 DENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
++ +EP++ Y LI + KG+ + A L+ E+
Sbjct: 736 IDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTEL 770
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 19/222 (8%)
Query: 161 FSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK 220
FS+ I Y+ +A +M Y V P + ++ + C+ EAQ FD++
Sbjct: 564 FSLCIEGYLE-----KAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMV 618
Query: 221 DR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRC---- 275
+R PD+ YT +IH +CR ++++AE +F+DMK GIKP+V TY++++D +
Sbjct: 619 ERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEH 678
Query: 276 -------GQIT--RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF 326
G++ +A +V E AG + V + L+ K E+ ++F++M
Sbjct: 679 HETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDS 738
Query: 327 NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSS 368
D + Y LI + R ++ AV ++ + KK P+ S
Sbjct: 739 GLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSES 780
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 151/364 (41%), Gaps = 11/364 (3%)
Query: 136 LRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVA 195
L FD A ++ K + + + L+ R G + F +++ G+ ++
Sbjct: 159 LGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYT 218
Query: 196 VSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD 255
+IVV +LCRK EEA + F Y + I+G C G+ E+A + ++ D
Sbjct: 219 YAIVVKALCRKGNLEEAAMLLIENESVFG-----YKTFINGLCVTGETEKAVALILELID 273
Query: 256 ----AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAG 311
AG +V+ C ++ A V EM + G + +++ + K
Sbjct: 274 RKYLAGDDLRA-VLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNM 332
Query: 312 RTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFN 371
+ L ++M + + + +++C+C+ + EA++ + + +N
Sbjct: 333 NLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYN 392
Query: 372 SIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDEN 431
F ++KL V A + +MK+ +P+ + Y L+ + + L L EM N
Sbjct: 393 VAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGN 452
Query: 432 QVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKM 491
+ P++ TY +L+ GH ++ + M E KPN ++E L A ++K
Sbjct: 453 GMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGP-KPNAVTNSVIIEGLCFARKVKE 511
Query: 492 HEEL 495
E+
Sbjct: 512 AEDF 515
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 148/350 (42%), Gaps = 19/350 (5%)
Query: 106 SLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLI 165
+L F W S NF + E +D G+ + F +I K +G+ +T I
Sbjct: 126 ALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIIS--KYKGI-AGGKTLESAI 182
Query: 166 RRYVRAGLAAEAVHAFNRME-DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFE 224
R VRAG + F +ME DYG+ DK ++++VV LC K A A+ + +
Sbjct: 183 DRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIF 242
Query: 225 PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDV 284
PD + LI GWC A K++ A + +M G + Y++++D +C+ + R D
Sbjct: 243 PDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCK---LCRKKDP 299
Query: 285 FA----------EMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIG 334
F EM G N TFN L+ K RTE+ + +F +M + C D
Sbjct: 300 FKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAET 359
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAP--NSSTFNSIFGCIAKLHDVNGAHRMYAK 392
Y LI + + E ++++ M G N + + + + A ++
Sbjct: 360 YLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKS 419
Query: 393 MKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRI 442
MK C P TY++LM + + L KE + + + YR+
Sbjct: 420 MKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRV 469
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 140/308 (45%), Gaps = 2/308 (0%)
Query: 106 SLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLI 165
SL FFNWA S ++ + Y E+ + ++ W ++ MK ++I+ ET +I
Sbjct: 94 SLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFII 153
Query: 166 RRYVRAGLAAEAVHAFNRM-EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRF 223
+Y + G +AV FN + + G + ++ +LC + A + ++
Sbjct: 154 EQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGL 213
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHD 283
+PD Y L++GWC AGK++ A+E +M G P ++I+ L G + A +
Sbjct: 214 KPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKE 273
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
+ ++M G P+ TFN L+ K+G E ++++ + D Y LI
Sbjct: 274 MVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVS 333
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
+ ++EA ++LN V+ G P S + I + + + A ++ MK PN
Sbjct: 334 KIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRP 393
Query: 404 TYNILMRM 411
Y +L+ M
Sbjct: 394 VYTMLITM 401
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 35/212 (16%)
Query: 294 NPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVK 353
P ++ + L + + E + ++ QMK + F+IE + ++ ++++AV+
Sbjct: 108 TPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVE 167
Query: 354 VLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFA 413
+ N GV K L C YN L+
Sbjct: 168 LFN-----GVP-----------------------------KTLGCQQTVDVYNSLLHALC 193
Query: 414 ESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNL 473
+ K L + M ++P+ TY IL+ +C G A + + EM + P
Sbjct: 194 DVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEM-SRRGFNPPA 252
Query: 474 QVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
+ + ++E L AG L+ +E+V KM GFV
Sbjct: 253 RGRDLLIEGLLNAGYLESAKEMVSKMTKGGFV 284
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 148/294 (50%), Gaps = 2/294 (0%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
L D M RG++ TF+ +I + G+ AV F +M +G PD V ++ ++ +
Sbjct: 197 LFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYG 256
Query: 205 RKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
R + A S +D + +++ D + +++LI + +G + I+++MK G+KPN+
Sbjct: 257 RAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLV 316
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
Y+ +IDS+ R + +A ++ ++I G PN T+ +L+R + +A + L ++ +M
Sbjct: 317 IYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREM 376
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVK-KGVAPNSSTFNSIFGCIAKLHD 382
K + I YN L+ + ++EA ++ M + P+S TF+S+ A
Sbjct: 377 KEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGR 436
Query: 383 VNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPN 436
V+ A +M+E P +++ + ++K +D V++ ++ E + P+
Sbjct: 437 VSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 133/270 (49%), Gaps = 8/270 (2%)
Query: 112 WATSLKNFPSSPE--PYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYV 169
W + +F P+ M+D G+ + D+A L D +T I A TFS LIR Y
Sbjct: 232 WFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYG 291
Query: 170 RAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVI 228
+G ++ + M+ GV P+ V + ++ S+ R +R +A+ + D + + F P+
Sbjct: 292 VSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWS 351
Query: 229 LYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM 288
Y +L+ + RA + A I+++MK+ G+ V Y+ ++ + A ++F +M
Sbjct: 352 TYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDM 411
Query: 289 IDA-GCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDEN 347
+ C+P++ TF+SL+ V+ +GR + QM+ +I+C+ + +
Sbjct: 412 KNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQ 471
Query: 348 LEEAVKVLNLMVKKGVAPNSSTFNSIFGCI 377
+++ V+ + +++ G+ P+ + GC+
Sbjct: 472 VDDVVRTFDQVLELGITPD----DRFCGCL 497
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 135/279 (48%)
Query: 226 DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVF 285
+VILY + + ++ +E++E++F +M + GIKP+ T++ +I + G RA + F
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 286 AEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRD 345
+M GC P+ VT +++ + +AG + L ++++ + D + ++ LI +
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 346 ENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTY 405
N + + + M GV PN +N + + + A +Y + PN TY
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
Query: 406 NILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVE 465
L+R + ++ D L + +EM E + V Y L+ M + + + A+++ ++M
Sbjct: 354 AALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKN 413
Query: 466 EKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
++ P+ + +++ + +G++ E + +M GF
Sbjct: 414 CETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGF 452
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 159/365 (43%), Gaps = 10/365 (2%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y ++ K D + + M GVE TF LI RAG A+A A+ +
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILR 564
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR---FEPDVILYTSLIHGWCRAGK 242
V PD+V + ++S+ + + A +K +PD I +L+ C AG+
Sbjct: 565 SKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQ 624
Query: 243 IERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNS 302
+ERA+E+++ + GI+ Y+I ++S + G A ++ +M + P+ V F++
Sbjct: 625 VERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSA 684
Query: 303 LMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKG 362
L+ V A ++ + K TI Y+ L+ C ++ ++A+++ +
Sbjct: 685 LIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIK 744
Query: 363 VAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVL 422
+ P ST N++ + + + + A ++K L PNT+TY++LM ++
Sbjct: 745 LRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSF 804
Query: 423 KLKKEMDENQVEPNVNTYRILILM-------FCEKGHWNNAYKLMKEMVEEKSLKPNLQV 475
KL + + V PN+ R + + C G ++K + +E K L V
Sbjct: 805 KLLSQAKGDGVSPNLIMCRCITSLCKRRFEKACAGGEPVVSFKSGRPQIENKWTSMALMV 864
Query: 476 YENVL 480
Y +
Sbjct: 865 YRETI 869
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 127/281 (45%), Gaps = 3/281 (1%)
Query: 226 DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVF 285
D LYT+LI ++GK++ E+F M ++G++ N+HT+ +ID R GQ+ +A +
Sbjct: 501 DCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAY 560
Query: 286 AEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFN--CAADTIGYNFLIECHC 343
+ P+ V FN+L+ ++G ++ V +MK D I L++ C
Sbjct: 561 GILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACC 620
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
+E A +V ++ K G+ + +K D + A +Y MKE + P+ +
Sbjct: 621 NAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEV 680
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
++ L+ + +K +D + ++ + +Y L+ C W A +L E
Sbjct: 681 FFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELY-EK 739
Query: 464 VEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
++ L+P + ++ L + QL E ++++ G
Sbjct: 740 IKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGL 780
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 118/291 (40%), Gaps = 39/291 (13%)
Query: 133 AGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPD 192
AG++ + +I RG T E +++ + ++G A + M++ V PD
Sbjct: 622 AGQVERAKEVYQMIHKYGIRG---TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPD 678
Query: 193 KVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFK 251
+V S ++ + +EA K + I Y+SL+ C A ++A E+++
Sbjct: 679 EVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYE 738
Query: 252 DMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAG 311
+K ++P + T + +I +LC Q+ +A + E+ G PN +T++ LM +
Sbjct: 739 KIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKD 798
Query: 312 RTEKVLQVFNQMKRFNCAADTIGYNFLIECHC-------RDE-----------------N 347
E ++ +Q K D + N LI C C R E
Sbjct: 799 DFEVSFKLLSQAK-----GDGVSPN-LIMCRCITSLCKRRFEKACAGGEPVVSFKSGRPQ 852
Query: 348 LEEAVKVLNLMVKK-----GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM 393
+E + LMV + G P + + + GC+ HD R+ + +
Sbjct: 853 IENKWTSMALMVYRETISGGTVPTTEVVSQVLGCLQLPHDAALRDRLISTL 903
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 101/251 (40%), Gaps = 6/251 (2%)
Query: 239 RAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAV 298
R G+I+ + +D+ + Y C+ + + F ++I NP
Sbjct: 412 RDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLI---LNPTMS 468
Query: 299 TFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLM 358
TFN LM V + E V ++ AD Y LI + ++ +V + M
Sbjct: 469 TFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQM 528
Query: 359 VKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSI 418
GV N TF ++ A+ V A Y ++ N P+ + +N L+ +S ++
Sbjct: 529 SNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAV 588
Query: 419 DMVLKLKKEM--DENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVY 476
D + EM + + ++P+ + L+ C G A K + +M+ + ++ +VY
Sbjct: 589 DRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERA-KEVYQMIHKYGIRGTPEVY 647
Query: 477 ENVLELLRKAG 487
+ K+G
Sbjct: 648 TIAVNSCSKSG 658
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 172/368 (46%), Gaps = 6/368 (1%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
W + M G+ TF++L + E +ME+ G PD V + +VS
Sbjct: 220 CWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVS 279
Query: 202 SLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
S CR+ R +EA + + + R PD++ YTSLI G C+ G++ A + F M D GIKP
Sbjct: 280 SYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKP 339
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+ +Y+ +I + C+ G + ++ + EM+ P+ T ++ V+ GR +
Sbjct: 340 DCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFV 399
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMV-KKGVAPNSSTFNSIFGCIAK 379
+++R +FLI C++ A +L+ ++ ++G T+N++ +++
Sbjct: 400 VELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSR 459
Query: 380 LHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNT 439
+ A + K+K N + + TY L+ L EM +++V+P+
Sbjct: 460 CDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFI 519
Query: 440 YRILILMFCEKGHWNNAYKLMKEM-VEEKSLKPNLQVYENVLELLRKAG-QLKMHEELVE 497
L+ +C++ ++ A +L+ +E + P + Y ++++ + + G K EL E
Sbjct: 520 CGALVYGYCKELDFDKAERLLSLFAMEFRIFDP--ESYNSLVKAVCETGCGYKKALELQE 577
Query: 498 KMVARGFV 505
+M GFV
Sbjct: 578 RMQRLGFV 585
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/403 (19%), Positives = 166/403 (41%), Gaps = 46/403 (11%)
Query: 114 TSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGL 173
S K FP + + E+++L K D+ L+ + T F +L++ Y++ GL
Sbjct: 124 VSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSA--TDECNWDPVVFDMLVKGYLKLGL 181
Query: 174 AAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSL 233
E F + D G F V+ L
Sbjct: 182 VEEGFRVFREVLDSG----------------------------------FSVSVVTCNHL 207
Query: 234 IHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGC 293
++G + +E +++ M GI PN +T++I+ + C D +M + G
Sbjct: 208 LNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGF 267
Query: 294 NPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVK 353
P+ VT+N+L+ + + GR ++ ++ M R D + Y LI+ C+D + EA +
Sbjct: 268 EPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQ 327
Query: 354 VLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFA 413
+ MV +G+ P+ ++N++ K + + ++ +M + +P+ T +++ F
Sbjct: 328 TFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFV 387
Query: 414 ESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNL 473
+ + E+ +V+ LI+ C++G A L+ ++EE+ +
Sbjct: 388 REGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKP 447
Query: 474 QVYENVLELLRKA----------GQLKMHEELVEKMVARGFVS 506
+ Y N++E L + G+LK ++++ R +
Sbjct: 448 ETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIG 490
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 128/280 (45%), Gaps = 20/280 (7%)
Query: 245 RAEEIFKDMK-DAGIKPNVHTYSIVI-------------DSLCRCGQITRAH---DVFAE 287
RA FK +K D G +PNV Y +++ LC ++T DVF
Sbjct: 95 RAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRV 154
Query: 288 MIDAG--CNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRD 345
++ A CN + V F+ L++ ++K G E+ +VF ++ + + N L+ +
Sbjct: 155 LVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKL 214
Query: 346 ENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTY 405
+ +E+ +V ++M + G+ PN+ TFN + + KM+E P+ +TY
Sbjct: 215 DLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTY 274
Query: 406 NILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVE 465
N L+ + + L K M +V P++ TY LI C+ G A++ MV
Sbjct: 275 NTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMV- 333
Query: 466 EKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
++ +KP+ Y ++ K G ++ ++L+ +M+ V
Sbjct: 334 DRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVV 373
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 193/460 (41%), Gaps = 74/460 (16%)
Query: 116 LKNFPSSPEPYI--EMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGL 173
+K F P ++ ++D K +FDLA + + K G+ + TF +L++ +AG
Sbjct: 219 MKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGR 278
Query: 174 AAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTS 232
E + RM + PD A + ++ +L + + + +D + +D +PDV+ Y +
Sbjct: 279 IEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGT 338
Query: 233 LIHGWCRAGKIERAEEIFKDMK-----------------------------------DAG 257
L+ G C+ G++ER E+F +MK D+G
Sbjct: 339 LVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSG 398
Query: 258 IKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVL 317
++ Y+ VI LC Q+ +A+ +F I+ P+ T + +M +V R
Sbjct: 399 YIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFS 458
Query: 318 QV--------------FNQMKRFNCAAD--------------TIG------YNFLIECHC 343
V Q + CA + T G YN L+E
Sbjct: 459 NVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALY 518
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
+ ++++++ + M K G P+SS+++ C + DV A + K+ E++C+P+
Sbjct: 519 KMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIA 578
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDEN-QVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
Y L + + ID V+ L +E N + P Y + + C+ + K++ E
Sbjct: 579 AYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDE 638
Query: 463 MVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
M +E + N +Y ++ + K G +K+ E+ ++ R
Sbjct: 639 MNQE-GVFINEVIYCAIISGMSKHGTIKVAREVFTELKKR 677
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 134/302 (44%), Gaps = 1/302 (0%)
Query: 109 FFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRY 168
FF+WA K + Y + HF A L + M ++G + + F +LIR +
Sbjct: 144 FFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMH 203
Query: 169 VRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDV 227
+ + +M+ +G P + ++ +L + + A + ++ K D +
Sbjct: 204 ADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEES 263
Query: 228 ILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAE 287
+ L+ G C+AG+IE EI + M++ KP+V Y+ +I +L G + + V+ E
Sbjct: 264 TTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDE 323
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDEN 347
M P+ + + +L+ K GR E+ ++F +MK D Y LIE D
Sbjct: 324 MRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGK 383
Query: 348 LEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNI 407
+ A + +V G + +N++ + ++ V+ A++++ E P+ T +
Sbjct: 384 VRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSP 443
Query: 408 LM 409
+M
Sbjct: 444 IM 445
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
R +++ MK G KP V Y+ ++D+L + G A V+ + + G + TF L+
Sbjct: 211 RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILV 270
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
+ KAGR E++L++ +M+ C D Y +I+ + NL+ +++V + M + +
Sbjct: 271 KGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIK 330
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
P+ + ++ + K V + ++ +MK L + Y +L+ F + L
Sbjct: 331 PDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNL 390
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLR 484
+++ ++ ++ Y +I C + AYKL + +EE+ L+P+ + ++
Sbjct: 391 WEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEE-LEPDFETLSPIMVAYV 449
Query: 485 KAGQLKMHEELVEKMVARGF 504
+L ++E++ G+
Sbjct: 450 VMNRLSDFSNVLERIGELGY 469
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 119/254 (46%), Gaps = 3/254 (1%)
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDA-GCNPNAVTFNSLMRVHVKAGR 312
K G K + Y+ L R G RA D E++D+ G P+ F L+R+H R
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHF-RAADQLPELMDSQGRPPSEKQFEILIRMHADNRR 208
Query: 313 TEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNS 372
+V V+ +MK+F YN +++ ++ + A+ V + G+ S+TF
Sbjct: 209 GLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMI 268
Query: 373 IFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQ 432
+ + K + + +M+E C P+ Y +++ ++D L++ EM ++
Sbjct: 269 LVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDE 328
Query: 433 VEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMH 492
++P+V Y L++ C+ G Y+L EM + K + + ++Y ++E G+++
Sbjct: 329 IKPDVMAYGTLVVGLCKDGRVERGYELFMEM-KGKQILIDREIYRVLIEGFVADGKVRSA 387
Query: 493 EELVEKMVARGFVS 506
L E +V G+++
Sbjct: 388 CNLWEDLVDSGYIA 401
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 169/365 (46%), Gaps = 9/365 (2%)
Query: 117 KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
+ F + E + ++L L + A+ ++ M G+ ++ +S+L+ + R+G +
Sbjct: 206 EGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQK 265
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIH 235
AV FN+M G +P+ V + ++ +EA + V+ + PD++L +IH
Sbjct: 266 AVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIH 325
Query: 236 GWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDA-GCN 294
+ R G+ E A ++F ++ + P+ +T++ ++ SLC G+ D+ + G +
Sbjct: 326 TYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKF----DLVPRITHGIGTD 381
Query: 295 PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKV 354
+ VT N L K G L+V + M + A D Y + CR A+K+
Sbjct: 382 FDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKM 441
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
+++K+ ++ ++I + +L N A ++ + + ++Y + ++
Sbjct: 442 YKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVR 501
Query: 415 SKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEK-SLKPN- 472
+K I+ L +M E + PN TYR +I C++ K+++E ++E L PN
Sbjct: 502 AKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNT 561
Query: 473 -LQVY 476
QVY
Sbjct: 562 KFQVY 566
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 182/437 (41%), Gaps = 43/437 (9%)
Query: 70 ALEFSRLSAAHPISPSTARRVIEK--CGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYI 127
L FS + +P + A+ + +R ++L FF W N+ +
Sbjct: 17 TLSFSSIHGQYPREYTAAKPLTHDNVYSCLRESPADLKTLNFFFWCAKQNNYFHDDRAFD 76
Query: 128 EMLDLAGKL-RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMED 186
M+ + KL R + +I+ +K G EI F +L+ + R + +A+ + M
Sbjct: 77 HMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSS 136
Query: 187 YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR------------------------ 222
+G P+ A+++++ + A F+ ++ R
Sbjct: 137 FGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHFCSRGGRGDLVGV 196
Query: 223 -----------FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDS 271
F P+ + ++ CR G + A ++ M +GI +V+ +S+++
Sbjct: 197 KIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSG 256
Query: 272 LCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
R G+ +A D+F +MI GC+PN VT+ SL++ V G ++ V ++++ A D
Sbjct: 257 FFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPD 316
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA 391
+ N +I + R EEA KV + K+ + P+ TF SI + ++G +
Sbjct: 317 IVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC----LSGKFDLVP 372
Query: 392 KMKE-LNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEK 450
++ + + +T N+L F++ LK+ M + TY + + C
Sbjct: 373 RITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRG 432
Query: 451 GHWNNAYKLMKEMVEEK 467
G A K+ K +++EK
Sbjct: 433 GAPRAAIKMYKIIIKEK 449
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 151/360 (41%), Gaps = 56/360 (15%)
Query: 112 WATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRA 171
W+ + F S EP + +DL K+ + +L+ T++ LI+ +V
Sbjct: 250 WSMLVSGFFRSGEPQ-KAVDLFNKMIQIGCSPNLV-------------TYTSLIKGFVDL 295
Query: 172 GLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILY 230
G+ EA ++++ G+APD V ++++ + R R EEA+ F S++ R PD +
Sbjct: 296 GMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTF 355
Query: 231 TSLIHGWCRAGKIE--------------------------------RAEEIFKDMKDAGI 258
S++ C +GK + A ++ M
Sbjct: 356 ASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDF 415
Query: 259 KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
+ +TY++ + +LCR G A ++ +I + +A ++++ ++ G+ +
Sbjct: 416 ALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVH 475
Query: 319 VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
+F + D + Y I+ R + +EEA + M + G+ PN T+ +I +
Sbjct: 476 LFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLC 535
Query: 379 KLHDVNGAHRMYAK--MKELNCLPNT--LTYNILMRM---FAESKSIDMVLKLKKEMDEN 431
K + ++ + + + PNT Y++L R F+E +S+ K K E EN
Sbjct: 536 KEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSRYRGDFSEFRSV--FEKWKSEFTEN 593
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 159/353 (45%), Gaps = 9/353 (2%)
Query: 93 KCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTR 152
+CG I+ + ++ + N + S I+ L GK+ + W L M +
Sbjct: 337 RCGKIKESLELWRIMEHKNSVNIV-----SYNILIKGLLENGKIDEATMIWRL---MPAK 388
Query: 153 GVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA 212
G T+ + I G +A+ +E G D A + ++ LC+K+R EEA
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEA 448
Query: 213 QSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDS 271
+ + K E + + +LI G R ++ A ++M G +P V +Y+I+I
Sbjct: 449 SNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICG 508
Query: 272 LCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
LC+ G+ A EM++ G P+ T++ L+ + + + L++++Q + D
Sbjct: 509 LCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETD 568
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA 391
+ +N LI C L++A+ V+ M + N T+N++ K+ D N A ++
Sbjct: 569 VMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWG 628
Query: 392 KMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILI 444
M ++ P+ ++YN +M+ + + ++ + + + P V T+ IL+
Sbjct: 629 YMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 156/360 (43%), Gaps = 1/360 (0%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
M+ K D + + MK E T+S LI AG +A FN +++
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEE 248
+ D V + ++ CR + +E+ + ++ + +++ Y LI G GKI+ A
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATM 380
Query: 249 IFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHV 308
I++ M G + TY I I LC G + +A V E+ +G + + + S++
Sbjct: 381 IWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLC 440
Query: 309 KAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSS 368
K R E+ + +M + ++ N LI RD L EA L M K G P
Sbjct: 441 KKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVV 500
Query: 369 TFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEM 428
++N + + K A +M E P+ TY+IL+ + ID+ L+L +
Sbjct: 501 SYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQF 560
Query: 429 DENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQ 488
++ +E +V + ILI C G ++A +M M E ++ NL Y ++E K G
Sbjct: 561 LQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM-EHRNCTANLVTYNTLMEGFFKVGD 619
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 161/318 (50%), Gaps = 6/318 (1%)
Query: 192 DKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRF--EPDVILYTSLIHGWCRAGKIERAEEI 249
+ VA+S V+ + + ++A F +++ F EP + Y +L++ + A + + E +
Sbjct: 78 EDVALS-VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESL 136
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVK 309
F + AG+ PN+ TY+++I C+ + +A M G P+ ++++++ K
Sbjct: 137 FAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAK 196
Query: 310 AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLN-LMVKKGVAPNSS 368
AG+ + L++F++M A D YN LI+ ++++ + A+++ + L+ V PN
Sbjct: 197 AGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVK 256
Query: 369 TFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEM 428
T N + ++K V+ +++ +MK+ + TY+ L+ ++ ++D + E+
Sbjct: 257 THNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316
Query: 429 DENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQ 488
DE + +V TY ++ FC G + +L + M + S+ N+ Y +++ L + G+
Sbjct: 317 DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV--NIVSYNILIKGLLENGK 374
Query: 489 LKMHEELVEKMVARGFVS 506
+ + M A+G+ +
Sbjct: 375 IDEATMIWRLMPAKGYAA 392
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/394 (20%), Positives = 172/394 (43%), Gaps = 10/394 (2%)
Query: 91 IEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMK 150
+ KCG + + ++ + L + S I L AG + D A + + +
Sbjct: 265 LSKCGRVDDCLKIWERMKQNEREKDLYTYSS----LIHGLCDAGNV---DKAESVFNELD 317
Query: 151 TRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAE 210
R I T++ ++ + R G E++ + ME + + + V+ +I++ L + +
Sbjct: 318 ERKASIDVVTYNTMLGGFCRCGKIKESLELWRIME-HKNSVNIVSYNILIKGLLENGKID 376
Query: 211 EAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVI 269
EA + + + + D Y IHG C G + +A + ++++ +G +V+ Y+ +I
Sbjct: 377 EATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASII 436
Query: 270 DSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCA 329
D LC+ ++ A ++ EM G N+ N+L+ ++ R + +M + C
Sbjct: 437 DCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCR 496
Query: 330 ADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRM 389
+ YN LI C+ EA + M++ G P+ T++ + + + ++ A +
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Query: 390 YAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCE 449
+ + + + + +NIL+ +D + + M+ N+ TY L+ F +
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616
Query: 450 KGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELL 483
G N A + M + L+P++ Y +++ L
Sbjct: 617 VGDSNRATVIWGYMY-KMGLQPDIISYNTIMKGL 649
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 36/196 (18%)
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR 208
M G T ++++LI +AG EA M + G PD SI++ LCR R+
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549
Query: 209 AEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIE----------------------- 244
+ A + ++ E DV+++ LIHG C GK++
Sbjct: 550 IDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNT 609
Query: 245 ------------RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAG 292
RA I+ M G++P++ +Y+ ++ LC C ++ A + F + + G
Sbjct: 610 LMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHG 669
Query: 293 CNPNAVTFNSLMRVHV 308
P T+N L+R V
Sbjct: 670 IFPTVYTWNILVRAVV 685
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 149/348 (42%), Gaps = 4/348 (1%)
Query: 107 LAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIR 166
L FF+W + + E Y + +AG + F L M+ +G IT +T++++I
Sbjct: 662 LRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIM 721
Query: 167 RYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRK--RRAEEA-QSFFDSVKDRF 223
+Y R GL A+ F M+D G+ P +++ LC K R EEA ++F + ++ F
Sbjct: 722 QYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGF 781
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHD 283
PD L + C G + A+ + G P YSI I +LCR G++ A
Sbjct: 782 VPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALS 840
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
A + T+ S++ ++ G +K L N MK Y LI
Sbjct: 841 ELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFF 900
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
+++ LE+ ++ M + P+ T+ ++ L V A + M+E P+
Sbjct: 901 KEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFK 960
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
TY+ + ++ + LKL EM + + P+ +R + +G
Sbjct: 961 TYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREG 1008
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 163/384 (42%), Gaps = 13/384 (3%)
Query: 84 PSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAW 143
P V+++C + H ++ FFNW F Y ML +AG+ R+ D+
Sbjct: 155 PEIVENVLKRCFKVPH-----LAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVD 209
Query: 144 HLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSL 203
L+ M+ G + T+++LI Y +A + + F +M G D A +I++ SL
Sbjct: 210 ELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSL 269
Query: 204 CRKRRAEEAQSFFDSVKDRFEPDVIL----YTSLIHGWCRAGKIERAEEIFKDMKDAGIK 259
C R + A F+ K+ E + Y L+ ++ K++ + I DM
Sbjct: 270 CIAGRGDLALEFY---KEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEI 326
Query: 260 PNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV 319
+ ++ S C G+I A ++ E+ + +A F L++ +A R L++
Sbjct: 327 SEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEI 386
Query: 320 FNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAK 379
+ MKR D+ Y +I + R ++ +A++ ++ K G P ST+ I + K
Sbjct: 387 VDIMKRRK-LDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFK 445
Query: 380 LHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNT 439
L ++ +M E P+++ ++ + K+ M+E ++P +
Sbjct: 446 LKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKS 505
Query: 440 YRILILMFCEKGHWNNAYKLMKEM 463
Y I + C ++ K+ +M
Sbjct: 506 YSIFVKELCRSSRYDEIIKIFNQM 529
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 6/278 (2%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITA-ETFSVLIRRYVRAGLAAEAVHAFNRM 184
Y +LD K D+ + D M R EI+ + F L++ + +G EA+ +
Sbjct: 297 YKMLLDCIAKSEKVDVVQSIADDM-VRICEISEHDAFGYLLKSFCVSGKIKEALELIREL 355
Query: 185 EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIE 244
++ + D I+V LCR R +A D +K R D +Y +I G+ R +
Sbjct: 356 KNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVS 415
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
+A E F+ +K +G P V TY+ ++ L + Q + ++F EMI+ G P++V +++
Sbjct: 416 KALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVV 475
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
H+ R + +VF+ M+ Y+ ++ CR +E +K+ N M +
Sbjct: 476 AGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIV 535
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
F+ + + K NG +KE+ N+
Sbjct: 536 IRDDIFSWVISSMEK----NGEKEKIHLIKEIQKRSNS 569
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%)
Query: 257 GIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKV 316
G V Y+ ++ + ++ +EM GC+ + T+ L+ V+ KA + K
Sbjct: 184 GFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKG 243
Query: 317 LQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGC 376
L VF +M++ D YN +I C + A++ M++KG+ T+ + C
Sbjct: 244 LLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDC 303
Query: 377 IAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPN 436
IAK V+ + M + + + L++ F S I L+L +E+ ++ +
Sbjct: 304 IAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLD 363
Query: 437 VNTYRILILMFCEKGHWNNAYKLMKEMVEEK 467
+ IL+ C +A +++ M K
Sbjct: 364 AKYFEILVKGLCRANRMVDALEIVDIMKRRK 394
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 153/374 (40%), Gaps = 42/374 (11%)
Query: 107 LAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIR 166
L + NW NF S ++ ++ GKL +F+ A ++ + G +++ L+
Sbjct: 129 LRYQNWW----NF--SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALME 182
Query: 167 RYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR---- 222
Y R G A F RM+ G P + I++ + + +EA+ F+++ D
Sbjct: 183 SYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP 242
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAG------------------------- 257
+PD +Y +I+ + +AG E+A ++F M G
Sbjct: 243 LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIY 302
Query: 258 -------IKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKA 310
I+P+V +Y+++I + R + A VF EM+DAG P +N L+ +
Sbjct: 303 DQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAIS 362
Query: 311 GRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
G E+ VF M+R D Y ++ + ++E A K + G PN T+
Sbjct: 363 GMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTY 422
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE 430
++ AK +DV +Y KM+ N +M K+ L KEM+
Sbjct: 423 GTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMES 482
Query: 431 NQVEPNVNTYRILI 444
V P+ +L+
Sbjct: 483 CGVPPDQKAKNVLL 496
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 133/282 (47%), Gaps = 7/282 (2%)
Query: 225 PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDV 284
P+VI YT+L+ + R GK AE IF+ M+ +G +P+ TY I++ + + A +V
Sbjct: 172 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 231
Query: 285 FAEMID---AGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIEC 341
F ++D + P+ ++ ++ ++ KAG EK +VF+ M T+ YN L+
Sbjct: 232 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF 291
Query: 342 HCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPN 401
+ +E K+ + M + + P+ ++ + + A ++ +M + P
Sbjct: 292 ET---SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPT 348
Query: 402 TLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMK 461
YNIL+ FA S ++ + K M +++ P++ +Y ++ + A K K
Sbjct: 349 HKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFK 408
Query: 462 EMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
++ +PN+ Y +++ KA ++ E+ EKM G
Sbjct: 409 R-IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSG 449
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 137/280 (48%), Gaps = 7/280 (2%)
Query: 228 ILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAE 287
I + LI + + G AE + + G PNV +Y+ +++S R G+ A +F
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM---KRFNCAADTIGYNFLIECHCR 344
M +G P+A+T+ +++ V+ + ++ +VF + K+ D Y+ +I + +
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
N E+A KV + MV KGV ++ T+NS+ +V+ ++Y +M+ + P+ ++
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVS 316
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
Y +L++ + ++ + L + +EM + V P Y IL+ F G A + K M
Sbjct: 317 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376
Query: 465 EEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
++ + P+L Y +L A ++ E+ +++ GF
Sbjct: 377 RDR-IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 415
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 4/242 (1%)
Query: 117 KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
K P S Y ++ + + D M+ ++ ++++LI+ Y RA E
Sbjct: 276 KGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEE 332
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIH 235
A+ F M D GV P A +I++ + E+A++ F S++ DR PD+ YT+++
Sbjct: 333 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 392
Query: 236 GWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNP 295
+ A +E AE+ FK +K G +PN+ TY +I + + + +V+ +M +G
Sbjct: 393 AYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKA 452
Query: 296 NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVL 355
N ++M + L + +M+ D N L+ + LEEA ++
Sbjct: 453 NQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELT 512
Query: 356 NL 357
+
Sbjct: 513 GI 514
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 35/237 (14%)
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
R E+FKD D + + I+S + R + D G P + +L+
Sbjct: 56 RKMEVFKDAADETDQKRWRGLMLEIESTGSAVPVLRQYKTDG---DQGL-PRDLVLGTLV 111
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTI-------GYNF-------LIECHCRDENLEE 350
R F Q+K++N ++ + +NF LI + + N
Sbjct: 112 R--------------FKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNG 157
Query: 351 AVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMR 410
A +VL+++ K G PN ++ ++ + N A ++ +M+ P+ +TY I+++
Sbjct: 158 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 217
Query: 411 MFAES---KSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
F E K + V + + ++ ++P+ Y ++I M+ + G++ A K+ MV
Sbjct: 218 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMV 274
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 153/305 (50%), Gaps = 21/305 (6%)
Query: 207 RRAEEAQSF------------FDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMK 254
RR EA+ F FD +K D ++ L++G+ +G E A ++F +M
Sbjct: 95 RRLREAKKFSTIDEVLQYQKKFDDIKSE---DFVIRIMLLYGY--SGMAEHAHKLFDEMP 149
Query: 255 DAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDA-GCNPNAVTFNSLMRVHVKAGRT 313
+ + V +++ ++ + ++ A F E+ + G P+ VT+N++++ + G
Sbjct: 150 ELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSM 209
Query: 314 EKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
+ +L +F ++++ D I +N L+E R E E ++ +LM K ++PN ++NS
Sbjct: 210 DDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSR 269
Query: 374 FGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQV 433
+ + A + MK P+ TYN L+ + +++ V+K EM E +
Sbjct: 270 VRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGL 329
Query: 434 EPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSL-KPNLQVYENVLELLRKAGQLKMH 492
P+ TY +LI + C+KG + A ++ +E ++ K L +PN+ Y+ V+E L AG++
Sbjct: 330 TPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM--YKPVVERLMGAGKIDEA 387
Query: 493 EELVE 497
+LV+
Sbjct: 388 TQLVK 392
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 113/221 (51%), Gaps = 2/221 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRM-EDYGVAPDKVAVSIVV 200
A L D M E T ++F+ L+ YV + EA+ F + E G+ PD V + ++
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 201 SSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIK 259
+LCRK ++ S F+ + K+ FEPD+I + +L+ + R + I+ MK +
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260
Query: 260 PNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV 319
PN+ +Y+ + L R + T A ++ M G +P+ T+N+L+ + E+V++
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKC 320
Query: 320 FNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVK 360
+N+MK DT+ Y LI C+ +L+ AV+V +K
Sbjct: 321 YNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIK 361
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 115/235 (48%), Gaps = 3/235 (1%)
Query: 155 EITAETFSV-LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQ 213
+I +E F + ++ Y +G+A A F+ M + + + ++S+ ++ +EA
Sbjct: 118 DIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAM 177
Query: 214 SFFDSVKDRF--EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDS 271
F + ++ PD++ Y ++I CR G ++ IF++++ G +P++ +++ +++
Sbjct: 178 KTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEE 237
Query: 272 LCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
R ++ M +PN ++NS +R + + L + + MK + D
Sbjct: 238 FYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPD 297
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGA 386
YN LI + D NLEE +K N M +KG+ P++ T+ + + K D++ A
Sbjct: 298 VHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRA 352
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
+ F A +LID MKT G+ T++ LI Y E + +N M++ G+ PD V
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 197 SIVVSSLCRK---RRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
+++ LC+K RA E +++K + +Y ++ AGKI+ A ++ K+
Sbjct: 337 CMLIPLLCKKGDLDRAVEVSE--EAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKNG 394
Query: 254 K 254
K
Sbjct: 395 K 395
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 153/374 (40%), Gaps = 42/374 (11%)
Query: 107 LAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIR 166
L + NW NF S ++ ++ GKL +F+ A ++ + G +++ L+
Sbjct: 136 LRYQNWW----NF--SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALME 189
Query: 167 RYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR---- 222
Y R G A F RM+ G P + I++ + + +EA+ F+++ D
Sbjct: 190 SYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP 249
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAG------------------------- 257
+PD +Y +I+ + +AG E+A ++F M G
Sbjct: 250 LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIY 309
Query: 258 -------IKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKA 310
I+P+V +Y+++I + R + A VF EM+DAG P +N L+ +
Sbjct: 310 DQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAIS 369
Query: 311 GRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
G E+ VF M+R D Y ++ + ++E A K + G PN T+
Sbjct: 370 GMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTY 429
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE 430
++ AK +DV +Y KM+ N +M K+ L KEM+
Sbjct: 430 GTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMES 489
Query: 431 NQVEPNVNTYRILI 444
V P+ +L+
Sbjct: 490 CGVPPDQKAKNVLL 503
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 133/282 (47%), Gaps = 7/282 (2%)
Query: 225 PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDV 284
P+VI YT+L+ + R GK AE IF+ M+ +G +P+ TY I++ + + A +V
Sbjct: 179 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 238
Query: 285 FAEMID---AGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIEC 341
F ++D + P+ ++ ++ ++ KAG EK +VF+ M T+ YN L+
Sbjct: 239 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF 298
Query: 342 HCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPN 401
+ +E K+ + M + + P+ ++ + + A ++ +M + P
Sbjct: 299 ET---SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPT 355
Query: 402 TLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMK 461
YNIL+ FA S ++ + K M +++ P++ +Y ++ + A K K
Sbjct: 356 HKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFK 415
Query: 462 EMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
++ +PN+ Y +++ KA ++ E+ EKM G
Sbjct: 416 R-IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSG 456
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 137/280 (48%), Gaps = 7/280 (2%)
Query: 228 ILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAE 287
I + LI + + G AE + + G PNV +Y+ +++S R G+ A +F
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM---KRFNCAADTIGYNFLIECHCR 344
M +G P+A+T+ +++ V+ + ++ +VF + K+ D Y+ +I + +
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
N E+A KV + MV KGV ++ T+NS+ +V+ ++Y +M+ + P+ ++
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVS 323
Query: 405 YNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
Y +L++ + ++ + L + +EM + V P Y IL+ F G A + K M
Sbjct: 324 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 383
Query: 465 EEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
++ + P+L Y +L A ++ E+ +++ GF
Sbjct: 384 RDR-IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 422
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 4/236 (1%)
Query: 117 KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
K P S Y ++ + + D M+ ++ ++++LI+ Y RA E
Sbjct: 283 KGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEE 339
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIH 235
A+ F M D GV P A +I++ + E+A++ F S++ DR PD+ YT+++
Sbjct: 340 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 399
Query: 236 GWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNP 295
+ A +E AE+ FK +K G +PN+ TY +I + + + +V+ +M +G
Sbjct: 400 AYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKA 459
Query: 296 NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEA 351
N ++M + L + +M+ D N L+ + LEEA
Sbjct: 460 NQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEA 515
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 35/237 (14%)
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
R E+FKD D + + I+S + R + D G P + +L+
Sbjct: 63 RKMEVFKDAADETDQKRWRGLMLEIESTGSAVPVLRQYKTDG---DQGL-PRDLVLGTLV 118
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTI-------GYNF-------LIECHCRDENLEE 350
R F Q+K++N ++ + +NF LI + + N
Sbjct: 119 R--------------FKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNG 164
Query: 351 AVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMR 410
A +VL+++ K G PN ++ ++ + N A ++ +M+ P+ +TY I+++
Sbjct: 165 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 224
Query: 411 MFAES---KSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
F E K + V + + ++ ++P+ Y ++I M+ + G++ A K+ MV
Sbjct: 225 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMV 281
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 18/291 (6%)
Query: 101 IPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVE---IT 157
I ++L FF W + F + +M L K F W + + R +T
Sbjct: 105 IGLQKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVT 164
Query: 158 AETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFD 217
+ + L++ G EA+ F RM++Y PD A + ++++LCR ++A+ D
Sbjct: 165 TASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLD 224
Query: 218 SVK---DRFEPDVILYTSLIHGWCRAG-----------KIERAEEIFKDMKDAGIKPNVH 263
++ R+ PD YT LI +CR G ++ A +F++M G P+V
Sbjct: 225 QMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVV 284
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
TY+ +ID C+ +I RA ++F +M GC PN VT+NS +R + E +++ M
Sbjct: 285 TYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTM 344
Query: 324 KRFNCAA-DTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
K+ + Y LI EA ++ MV+ G+ P T+ +
Sbjct: 345 KKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLV 395
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 19/257 (7%)
Query: 269 IDSLCRC----GQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMK 324
I L +C G + A F M + C P+ +N+++ + G +K + +QM+
Sbjct: 168 ITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQ 227
Query: 325 --RFNCAADTIGYNFLIECHCR-----------DENLEEAVKVLNLMVKKGVAPNSSTFN 371
F DT Y LI +CR + EA ++ M+ +G P+ T+N
Sbjct: 228 LPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYN 287
Query: 372 SIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE- 430
+ K + + A ++ MK C+PN +TYN +R ++ + I+ +++ + M +
Sbjct: 288 CLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKL 347
Query: 431 NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK 490
P +TY LI E A L+ EMV E L P Y+ V + L G
Sbjct: 348 GHGVPGSSTYTPLIHALVETRRAAEARDLVVEMV-EAGLVPREYTYKLVCDALSSEGLAS 406
Query: 491 MHEELVEKMVARGFVSR 507
+E + K + G R
Sbjct: 407 TLDEELHKRMREGIQQR 423
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 146/323 (45%), Gaps = 1/323 (0%)
Query: 109 FFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRY 168
FF W +NF + Y ++ + + + LID M G TA TF++LI
Sbjct: 138 FFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTC 197
Query: 169 VRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDV 227
AGLA + V F + + + P K + + ++ SL ++ + ++ ++D F PDV
Sbjct: 198 GEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDV 257
Query: 228 ILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAE 287
+ Y ++ R GK +R + +M G P+++TY+I++ L + A ++
Sbjct: 258 LTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNH 317
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDEN 347
M + G P + F +L+ +AG+ E ++ + C D + Y +I +
Sbjct: 318 MREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGE 377
Query: 348 LEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNI 407
LE+A ++ M +KG PN T+NS+ A + +M+ C PN + Y+
Sbjct: 378 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYST 437
Query: 408 LMRMFAESKSIDMVLKLKKEMDE 430
L+ + + ++ K+M E
Sbjct: 438 LVNNLKNAGKVLEAHEVVKDMVE 460
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 134/285 (47%), Gaps = 1/285 (0%)
Query: 219 VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
+KD + + LI AG E F K +P H+Y+ ++ SL Q
Sbjct: 179 IKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQY 238
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
V+ +M++ G P+ +T+N +M + + G+T+++ ++ ++M + + D YN L
Sbjct: 239 KLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNIL 298
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNC 398
+ A+ +LN M + GV P F ++ +++ + + ++ C
Sbjct: 299 LHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGC 358
Query: 399 LPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYK 458
P+ + Y +++ + ++ ++ KEM E PNV TY +I FC G + A
Sbjct: 359 TPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACA 418
Query: 459 LMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
L+KEM E + PN VY ++ L+ AG++ E+V+ MV +G
Sbjct: 419 LLKEM-ESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 144/292 (49%), Gaps = 10/292 (3%)
Query: 134 GKLRHFDLAWHLIDSMKTRGVEITAETF-SVLIRRYVRAGLAAEAVHAFNRMEDYGVAPD 192
K R F LI+S K +I E F S LIR Y +A + A+ F +M+ YG
Sbjct: 78 AKCRRFSDIETLIESHKN-DPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRS 136
Query: 193 KVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFE---PDVILYTSLIHGWCRAGKIERAEEI 249
V+ + ++++ + ++ FD + R+ PD I Y LI +C +G E+A EI
Sbjct: 137 AVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEI 196
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVK 309
+ M+ G++ ++ ++ SL + G++ A +++ EM+ GC + +N + + +
Sbjct: 197 MRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI-MSAQ 255
Query: 310 AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSST 369
E+V ++ +M DTI YN+L+ +C L+EA KV + APN++T
Sbjct: 256 KESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAAT 315
Query: 370 FNSIFG--CIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSID 419
F ++ C ++L++ + ++ K ++ +P+ T L+ E+K D
Sbjct: 316 FRTLIFHLCYSRLYE--QGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRD 365
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 133/297 (44%), Gaps = 12/297 (4%)
Query: 176 EAVHAFNRMEDYGVAP--DKVAVSIVVSSLCRKRRAEEAQSFFDSVKD----RFEPDVIL 229
+A+ + + D+ +P + A + V L + RR + ++ +S K+ + EP
Sbjct: 48 KALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEP---F 104
Query: 230 YTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMI 289
Y++LI + +A A F+ M G + +++ ++++ + +F E+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 290 DAGCN--PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDEN 347
P+ +++ L++ + +G EK +++ QM+ TI + ++ +
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 348 LEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNI 407
LE A + N MVKKG +++ +N + A+ + +M + P+T++YN
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYN-VRIMSAQKESPERVKELIEEMSSMGLKPDTISYNY 283
Query: 408 LMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
LM + E +D K+ + ++ N PN T+R LI C + Y + K+ V
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSV 340
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 124/292 (42%), Gaps = 3/292 (1%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV 194
K R D W L M E +E LIR G +E + G+ P +
Sbjct: 192 KARKLDRFWELHKEMVES--EFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQY 249
Query: 195 AVSIVVSSLCR-KRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
+ ++S C A ++ + P + +Y +I G C K A IFK++
Sbjct: 250 VYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNL 309
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRT 313
KD G P+ Y+ +I C G + A ++ EMI G PN +N ++ H K G
Sbjct: 310 KDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEI 369
Query: 314 EKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
V +N+M R + N +I+ C +EA ++ M + GV PN+ T+N++
Sbjct: 370 SLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNAL 429
Query: 374 FGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLK 425
K + V ++Y ++K L P+ + Y L+R S S+ L L+
Sbjct: 430 IKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNLE 481
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 152/387 (39%), Gaps = 21/387 (5%)
Query: 106 SLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLI 165
SL FF W S N+ +P P + + L G L + T G + +
Sbjct: 96 SLWFFRWLCS--NYDYTPGP-VSLNILFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYV 152
Query: 166 RRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR--------AEEAQSFFD 217
+ GL EA+ +N ++D G++ V + V+ + R+ E +S FD
Sbjct: 153 KCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFD 212
Query: 218 SVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQ 277
S + R LI C G + E+ K G+ P + Y+ +I C G
Sbjct: 213 SERIR---------CLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGN 263
Query: 278 ITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNF 337
+V MI P+ + +++ + + +F +K A D + Y
Sbjct: 264 YACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTT 323
Query: 338 LIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELN 397
+I C L A K+ M+KKG+ PN +N + K +++ Y +M
Sbjct: 324 MIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNG 383
Query: 398 CLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAY 457
L+ N +++ F D ++ K M E V PN TY LI FC++
Sbjct: 384 YGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGL 443
Query: 458 KLMKEMVEEKSLKPNLQVYENVLELLR 484
KL KE+ + LKP+ Y ++ L+
Sbjct: 444 KLYKEL-KALGLKPSGMAYAALVRNLK 469
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 173/386 (44%), Gaps = 32/386 (8%)
Query: 61 SPTLTIPDLALEFSRLSAAHPISPST--ARRVIEKCGAIRHGIPFYQSLAFFNWAT-SLK 117
SP + DL +++S +SPS+ +VIE C ++ + L FF+W+ SL
Sbjct: 46 SPVGGLDDLEENLNQVS----VSPSSNLVTQVIESC---KNETSPRRLLRFFSWSCKSLG 98
Query: 118 NFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEA 177
+ E + LA K H + L D ++ + +TFS++ V+ G +A
Sbjct: 99 SSLHDKEFNYVLRVLAEKKDHTAMQILLSD-LRKENRAMDKQTFSIVAETLVKVGKEEDA 157
Query: 178 VHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVI-LYTSLIHG 236
+ F ++ + D V+ ++S+LC + + A KD + + +Y SL+ G
Sbjct: 158 IGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFG 217
Query: 237 WCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR-------CGQITRAHDVFAEMI 289
W ++ A + +DMK AGI P++ ++ ++ LC G + A ++ EM
Sbjct: 218 WSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMR 277
Query: 290 DAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLE 349
P ++++N L+ + R + Q+ QMKR C DT Y F++
Sbjct: 278 SYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFG 337
Query: 350 EAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILM 409
+ ++++ M+++G P + + G + + VN A +++ KMK + Y++L+
Sbjct: 338 KGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLI 397
Query: 410 -------------RMFAESKSIDMVL 422
++ E+ SID+ L
Sbjct: 398 PKLCKGGNFEKGRELWEEALSIDVTL 423
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 189/452 (41%), Gaps = 65/452 (14%)
Query: 81 PISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLK-NFPSSPEPYIEMLDLAGKLRHF 139
PIS +++ R+ I + L FF W SL+ + S Y ++ +
Sbjct: 54 PISEPVVLQILR-----RNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLL 108
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG----------- 188
L+ SMK GV + +L+ +R+G A+ + ME+ G
Sbjct: 109 GEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSV 168
Query: 189 ---------------------------------------VAPDKVAVSIVVSSLCRKRRA 209
P VAV+ ++ L R
Sbjct: 169 LIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMR 228
Query: 210 EEAQSFFDSVKD--RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD------AGIKPN 261
E + F+ +K RF+ D Y IHG+ G ++ A +FK+MK+ + P+
Sbjct: 229 SEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPD 288
Query: 262 VHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFN 321
+ TY+ +I LC G+ A V+ E+ +G P+ T+ L++ K+ R + ++++
Sbjct: 289 ICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYG 348
Query: 322 QMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLH 381
+M+ DTI YN L++ + + EA ++ MV++GV + T+N + + +
Sbjct: 349 EMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNG 408
Query: 382 DVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYR 441
++ +K+ + +T++I+ ++ +KL +EM+ ++ T
Sbjct: 409 RAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTIS 468
Query: 442 ILILMFCEKGHWNNAYKLMKEMVEEKSLKPNL 473
L++ F ++G W+ KLMK + E +L PN+
Sbjct: 469 SLLIGFHKQGRWDWKEKLMKH-IREGNLVPNV 499
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 122/254 (48%), Gaps = 7/254 (2%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMED----YG--VAPDKVAVSIVVSSLCRKRRAEEAQ 213
++++ I + G A+ F M++ YG PD + ++ LC +A++A
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 214 SFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSL 272
+D +K EPD Y LI G C++ +++ A I+ +M+ G P+ Y+ ++D
Sbjct: 310 IVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGT 369
Query: 273 CRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADT 332
+ ++T A +F +M+ G + T+N L+ + GR E +F +K+ D
Sbjct: 370 LKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDA 429
Query: 333 IGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAK 392
I ++ + CR+ LE AVK++ M +G + + T +S+ K + ++
Sbjct: 430 ITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKH 489
Query: 393 MKELNCLPNTLTYN 406
++E N +PN L +N
Sbjct: 490 IREGNLVPNVLRWN 503
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 172/404 (42%), Gaps = 31/404 (7%)
Query: 127 IEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMED 186
I +L L GK + + W D +K G E T+ +LI+ ++ +A+ + M+
Sbjct: 296 IHVLCLFGKAKDALIVW---DELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQY 352
Query: 187 YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIER 245
G PD + + ++ + R+ EA F+ V++ Y LI G R G+ E
Sbjct: 353 NGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEA 412
Query: 246 AEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMR 305
+F D+K G + T+SIV LCR G++ A + EM G + + VT +SL+
Sbjct: 413 GFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLI 472
Query: 306 VHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIEC-----HCRDEN----LEEAVKVLN 356
K GR + ++ ++ N + + +N +E +D++ L+
Sbjct: 473 GFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLD 532
Query: 357 LMVKKG----------VAPNSSTFNSIFGCIAKL-HDVNGAHRMY--AKMKELNCLPNTL 403
+M G V+P S + +L H N ++ A+ + + P++
Sbjct: 533 IMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSF 592
Query: 404 ---TYNILMRMFAESKSIDMVLKLKKEMDENQV-EPNVNTYRILILMFCEKGHWNNAYKL 459
N + ++ + + KL + + V + TY ++ F +KG++ A +
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 460 MKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+ +M E ++ Y +++ L K G+ + +++++ +G
Sbjct: 653 LDQMFEN-FCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQG 695
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%)
Query: 230 YTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMI 289
Y S++ + + G + A + M + ++ TY+++I L + G+ A V +
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 290 DAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLE 349
G + V +N+L+ KA R ++ Q+F+ MK D + YN +IE + + L+
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 350 EAVKVLNLMVKKGVAPNSST 369
EA K L M+ G PN T
Sbjct: 753 EAYKYLKAMLDAGCLPNHVT 772
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 10/208 (4%)
Query: 202 SLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP- 260
L R +R E FD V + + + + G + A ++F+ G+
Sbjct: 578 GLARGQRVEAKPDSFD---------VDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDL 628
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
+TY+ ++ S + G A V +M + C + T+N +++ K GR + V
Sbjct: 629 TSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVL 688
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+++ + D + YN LI + L+EA ++ + M G+ P+ ++N++ +K
Sbjct: 689 DRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKA 748
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNIL 408
+ A++ M + CLPN +T IL
Sbjct: 749 GKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 128/317 (40%), Gaps = 41/317 (12%)
Query: 218 SVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQ 277
S++ ++ Y+ + CR G + ++ MK+ G+ + I++DSL R G+
Sbjct: 83 SLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGK 142
Query: 278 ITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM--KRFNCAADTIGY 335
A V M + G N ++S++ VK L + ++ N + D G
Sbjct: 143 FESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGR 202
Query: 336 NFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI---------------------- 373
++ L V V L+V A S F +
Sbjct: 203 VIIV------SYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIH 256
Query: 374 -FGCIAKLHDVNGAHRMYAKMKELNCL------PNTLTYNILMRMFAESKSIDMVLKLKK 426
FGC D++ A ++ +MKE + + P+ TYN L+ + L +
Sbjct: 257 GFGCWG---DLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWD 313
Query: 427 EMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKA 486
E+ + EP+ +TYRILI C+ ++A ++ EM + P+ VY +L+ KA
Sbjct: 314 ELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEM-QYNGFVPDTIVYNCLLDGTLKA 372
Query: 487 GQLKMHEELVEKMVARG 503
++ +L EKMV G
Sbjct: 373 RKVTEACQLFEKMVQEG 389
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y M+ K +F A ++D M T++V+I+ + G A A +R+
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIE 244
G D V + ++++L + R +EA FD +K + PDV+ Y ++I +AGK++
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
A + K M DAG PN H ++D L +
Sbjct: 753 EAYKYLKAMLDAGCLPN-HVTDTILDYLGK 781
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 7/188 (3%)
Query: 301 NSLMRVHVKAGRTE---KVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNL 357
N+ + +++ G K+ ++FN M + + T YN ++ + + A VL+
Sbjct: 598 NTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYT--YNSMMSSFVKKGYFQTARGVLDQ 655
Query: 358 MVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKS 417
M + A + +T+N I + K+ + A + ++ + + + YN L+ ++
Sbjct: 656 MFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATR 715
Query: 418 IDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYE 477
+D +L M N + P+V +Y +I + + G AYK +K M++ L PN V +
Sbjct: 716 LDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCL-PN-HVTD 773
Query: 478 NVLELLRK 485
+L+ L K
Sbjct: 774 TILDYLGK 781
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%)
Query: 297 AVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLN 356
+ T+NS+M VK G + V +QM CAAD YN +I+ + + A VL+
Sbjct: 630 SYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLD 689
Query: 357 LMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESK 416
+ K+G + +N++ + K ++ A +++ MK P+ ++YN ++ + +++
Sbjct: 690 RLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAG 749
Query: 417 SIDMVLKLKKEMDENQVEPNVNTYRIL 443
+ K K M + PN T IL
Sbjct: 750 KLKEAYKYLKAMLDAGCLPNHVTDTIL 776
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 156/317 (49%), Gaps = 29/317 (9%)
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDSVKD--RFEPDVILYTSLIHGWCRAGKIERAEEIFKD 252
A+SI++ R E +S + K + P +L + +H A + E A ++F+
Sbjct: 89 AISIIL-------RREATKSIIEKKKGSKKLLPRTVLES--LHERITALRWESAIQVFEL 139
Query: 253 MKDA-GIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAG 311
+++ KPNV Y +I L +C Q +AH++F EMI+ GC N + +L+ + ++G
Sbjct: 140 LREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSG 199
Query: 312 RTEKVLQVFNQMK-RFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
R + + +MK NC D Y+ LI+ + ++ +L+ M ++G+ PN+ T+
Sbjct: 200 RFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITY 259
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMK--------ELNCLPNTLTYNILMRMFAESKSIDMVL 422
N++ D G +M+ +M+ E +C P++ T N +R F + I+M+
Sbjct: 260 NTLI-------DAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMME 312
Query: 423 KLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLEL 482
++ + +EPN+ T+ IL+ + + G++ +M E +++ + Y V++
Sbjct: 313 NCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVM-EYMQKYHYSWTIVTYNVVIDA 371
Query: 483 LRKAGQLKMHEELVEKM 499
+AG LK E L M
Sbjct: 372 FGRAGDLKQMEYLFRLM 388
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 171/398 (42%), Gaps = 36/398 (9%)
Query: 74 SRLSAAHPISPSTARRVIEKCGAIRHGIP------FYQSLAFFNWATSLKNFPSSPEP-- 125
SR + + + + +IEK + +P ++ + W ++++ F E
Sbjct: 86 SRKAISIILRREATKSIIEKKKGSKKLLPRTVLESLHERITALRWESAIQVFELLREQLW 145
Query: 126 -------YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAV 178
Y++++ + GK + + A L M G + E ++ L+ Y R+G A
Sbjct: 146 YKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAF 205
Query: 179 HAFNRME-DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHG 236
RM+ + PD SI++ S + ++ Q D + P+ I Y +LI
Sbjct: 206 TLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDA 265
Query: 237 WCRAGK-IERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNP 295
+ +A +E + + + + KP+ T + + + GQI + + + +G P
Sbjct: 266 YGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEP 325
Query: 296 NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVL 355
N TFN L+ + K+G +K+ V M++++ + + YN +I+ R +L++ +
Sbjct: 326 NIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLF 385
Query: 356 NLMVKKGVAPNSSTFNSI---FGCIAKLHDVNGAHR------MYAKMKELNCLPNTLTYN 406
LM + + P+ T S+ +G +K + G R + + NCL +
Sbjct: 386 RLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGR- 444
Query: 407 ILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILI 444
M FAE K VL+L M++ +P+ TYR ++
Sbjct: 445 --MEKFAEMKG---VLEL---MEKKGFKPDKITYRTMV 474
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 141/319 (44%), Gaps = 59/319 (18%)
Query: 124 EPYIEMLDLAGKLRHFDLAWHLIDSMKT-RGVEITAETFSVLIRRYVRAGLAAEAVHAFN 182
E Y ++ + FD A+ L++ MK+ + T+S+LI+ +++ V AF+
Sbjct: 186 EVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQ-------VFAFD 238
Query: 183 RMEDY-------GVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV--KDRFEPDVILYTSL 233
+++D G+ P+ + + ++ + + + E +S + +D +PD S
Sbjct: 239 KVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNST 298
Query: 234 IHGWCRAGKIERAEEIFKDMKDAGIKPNVHT----------------------------- 264
+ + G+IE E ++ + +GI+PN+ T
Sbjct: 299 LRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHY 358
Query: 265 ------YSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
Y++VID+ R G + + +F M P+ VT SL+R + +A + +K+
Sbjct: 359 SWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGG 418
Query: 319 VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
V ++ + D + +N L++ + R E E VL LM KKG P+ T+ + +
Sbjct: 419 VLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRT----MV 474
Query: 379 KLHDVNGAHRMYAKMKELN 397
K + ++G M +KEL+
Sbjct: 475 KAYRISG---MTTHVKELH 490
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 2/199 (1%)
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIG-YNFLIECHCRDENLEEAVKVLNLMVKKGVAPN 366
+ A R E +QVF ++ +G Y LI + + E+A ++ M+ +G N
Sbjct: 125 ITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVN 184
Query: 367 SSTFNSIFGCIAKLHDVNGAHRMYAKMKEL-NCLPNTLTYNILMRMFAESKSIDMVLKLK 425
+ ++ ++ + A + +MK NC P+ TY+IL++ F + + D V L
Sbjct: 185 HEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLL 244
Query: 426 KEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRK 485
+M + PN TY LI + + + + +M+ E KP+ + L
Sbjct: 245 SDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGG 304
Query: 486 AGQLKMHEELVEKMVARGF 504
GQ++M E EK + G
Sbjct: 305 NGQIEMMENCYEKFQSSGI 323
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 137/291 (47%), Gaps = 36/291 (12%)
Query: 175 AEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSL 233
++A +RM GV P+K ++ + CR +A+ FF+ V + PD+ YT +
Sbjct: 582 SKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIM 641
Query: 234 IHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDS---------------------- 271
I+ +CR + ++A +F+DMK +KP+V TYS++++S
Sbjct: 642 INTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYY 701
Query: 272 ------LCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR 325
C + + + +F +M P+ VT+ L++ + E+ L +MK
Sbjct: 702 TIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK-----NKPERNLS--REMKA 754
Query: 326 FNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNG 385
F+ D Y LI+ C+ +L EA ++ + M++ GV P+++ + ++ C K+ +
Sbjct: 755 FDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKE 814
Query: 386 AHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPN 436
A ++ +M E P+ + Y L+ + + +KL KEM E ++P
Sbjct: 815 AKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 127/249 (51%), Gaps = 15/249 (6%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y M++ +L A+ L + MK R V+ T+SVL+ + E ME
Sbjct: 638 YTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKRE-------ME 690
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIE 244
+ V PD V +I+++ C ++ + F +K R PDV+ YT L+ K E
Sbjct: 691 AFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-----KPE 745
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
R + ++MK +KP+V Y+++ID C+ G + A +F +MI++G +P+A + +L+
Sbjct: 746 R--NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALI 803
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
K G ++ +F++M D + Y LI CR+ + +AVK++ M++KG+
Sbjct: 804 ACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK 863
Query: 365 PNSSTFNSI 373
P ++ +++
Sbjct: 864 PTKASLSAV 872
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 174/420 (41%), Gaps = 61/420 (14%)
Query: 122 SPEPYIEMLDLAGKLRHFDL--AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVH 179
P+ Y+ + G ++ ++ A + + M + I S +++ Y + G +EA
Sbjct: 323 DPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYD 382
Query: 180 AFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWC 238
F + ++ D+V ++ +L + + EEA F + + PDVI YT+LI G C
Sbjct: 383 LFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCC 442
Query: 239 RAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAV 298
GK A ++ +M G P++ Y+++ L G A + M + G P V
Sbjct: 443 LQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYV 502
Query: 299 TFNSLMRVHVKAGRTEKVLQVFNQMK---RFN--------CAADTIGYNF---------- 337
T N ++ + AG +K + ++ R N CAA + + F
Sbjct: 503 THNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPL 562
Query: 338 -------LIECHCRDEN-LEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRM 389
L C +++ + +A +L+ M K GV P S + + G ++++V A
Sbjct: 563 PKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREF 622
Query: 390 YAKMKELNCLPNTLTYNILMR-------------MFAESKSIDMV--------------- 421
+ + +P+ TY I++ +F + K D+
Sbjct: 623 FEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPE 682
Query: 422 LKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
L +K+EM+ V P+V Y I+I +C Y L K+M + + + P++ Y +L+
Sbjct: 683 LDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDM-KRREIVPDVVTYTVLLK 741
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 152/358 (42%), Gaps = 18/358 (5%)
Query: 152 RGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEE 211
R +I A F LI R + +G + V F +E G+ D +VV +L R EE
Sbjct: 178 RAPDIKALNF--LISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEE 235
Query: 212 AQSFFDS--VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI---KPNVH-TY 265
+ + + P + Y + I G C + A + + ++DA I K ++ Y
Sbjct: 236 LEKLLSRLLISETRNP-CVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAY 294
Query: 266 SIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM-- 323
V+ LC +I A V +M G +P+ +++++ H K K + VFN+M
Sbjct: 295 RKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLK 354
Query: 324 --KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLH 381
KR NC + + +++C+C+ N EA + + ++ + +N F + KL
Sbjct: 355 KRKRINC----VIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLG 410
Query: 382 DVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYR 441
V A ++ +M P+ + Y L+ L EMD P++ Y
Sbjct: 411 KVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYN 470
Query: 442 ILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
+L G A++ +K M+E + +KP + V+E L AG+L E E +
Sbjct: 471 VLAGGLATNGLAQEAFETLK-MMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 228 ILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAE 287
I Y ++ G C +IE AE + DM+ GI P+V+ YS +I+ + I +A DVF +
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDEN 347
M+ N V +S+++ + + G + +F + + N + D + YN + +
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 348 LEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNI 407
+EEA+++ M KG+AP+ + ++ G + A + +M P+ + YN+
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 408 LMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEK 467
L A + + K M+ V+P T+ ++I + G + A + E +E K
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA-EAFYESLEHK 530
Query: 468 S 468
S
Sbjct: 531 S 531
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 10/274 (3%)
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSF-FDSVKDRFEPDVILYTSLIHGWCRAGKIE 244
D G+A KV V LC + R E+A+S D K +PDV +Y+++I G + I
Sbjct: 289 DLGIAYRKV-----VRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIP 343
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
+A ++F M + N S ++ C+ G + A+D+F E + + + V +N
Sbjct: 344 KAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAF 403
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
K G+ E+ +++F +M A D I Y LI C +A ++ M G
Sbjct: 404 DALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKT 463
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
P+ +N + G +A A M+ P +T+N+++ ++ +D
Sbjct: 464 PDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAF 523
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYK 458
+ ++ E + + ++ FC G ++A++
Sbjct: 524 YESLEHKSRENDAS----MVKGFCAAGCLDHAFE 553
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 8/186 (4%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y M++ L + L MK R + T++VL++ L+ E M+
Sbjct: 701 YTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSRE-------MK 753
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIE 244
+ V PD ++++ C+ EA+ FD ++ +PD YT+LI C+ G ++
Sbjct: 754 AFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLK 813
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A+ IF M ++G+KP+V Y+ +I CR G + +A + EM++ G P + +++
Sbjct: 814 EAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVH 873
Query: 305 RVHVKA 310
+KA
Sbjct: 874 YAKLKA 879
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 156/404 (38%), Gaps = 64/404 (15%)
Query: 153 GVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA 212
G++ +TF + VR G + ++ G + + I VS+ K A
Sbjct: 104 GLDKKLDTF---LFELVRRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYAN-- 158
Query: 213 QSFFDSVKDRF---------EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
FD D F PD+ LI +G+ + F +++ G+ + H
Sbjct: 159 LDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAH 218
Query: 264 TYSIVIDSLCR----------------------------------CGQIT---------- 279
TY +V+ +L R Q+T
Sbjct: 219 TYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPL 278
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
R ++ + D G + + ++R R E V M++ D Y+ +I
Sbjct: 279 RDANILVDKSDLG-----IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAII 333
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
E H ++ N+ +AV V N M+KK N +SI C ++ + + A+ ++ + +E N
Sbjct: 334 EGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNIS 393
Query: 400 PNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKL 459
+ + YN+ + ++ ++L +EM + P+V Y LI C +G ++A+ L
Sbjct: 394 LDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDL 453
Query: 460 MKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
M EM + P++ +Y + L G + E ++ M RG
Sbjct: 454 MIEM-DGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRG 496
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 186/394 (47%), Gaps = 14/394 (3%)
Query: 116 LKNFPSSPEPY---IEMLDLAGKLRHFD-LAWHLIDSMKTRGVEITAETFSVLIRRYVRA 171
L N +P+ Y I+ L + +L + + +HL S K + F +I Y +
Sbjct: 65 LHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEK---FDTPESIFRDVIAAYGFS 121
Query: 172 GLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEA--QSFFDSVKDRFEPDVIL 229
G EA+ F ++ ++ P ++ ++ L RKR++ E + + + +
Sbjct: 122 GRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEEST 181
Query: 230 YTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMI 289
+ LI CR G+++ A E+ + M + + YS ++ S+C+ + + DV +
Sbjct: 182 FGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCK-HKDSSCFDVIGYLE 240
Query: 290 D---AGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDE 346
D +P + +MR V+ GR ++V+ V NQMK D + Y +++ DE
Sbjct: 241 DLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADE 300
Query: 347 NLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYN 406
+ +A K+ + ++ G+AP+ T+N + K +D+ GA +M + M +L PN +TYN
Sbjct: 301 DYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYN 360
Query: 407 ILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEE 466
IL++ ++ + L KEM+ N V N +T+ I+I + E A+ L++E
Sbjct: 361 ILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNM 420
Query: 467 KSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
+ ++ E V+ L + G + EL+ +V
Sbjct: 421 NVFVKSSRI-EEVISRLCEKGLMDQAVELLAHLV 453
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 133/318 (41%), Gaps = 6/318 (1%)
Query: 191 PDKVAVSIVVSSLCRKRRAEEAQS--FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEE 248
P A V+ +L + + E S + V ++F+ ++ +I + +G+IE A E
Sbjct: 70 PTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIE 129
Query: 249 IFKDMKDAGIKPNVHTYSIVIDSLCRCGQ-ITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
+F + + P+ +T + ++ L R Q + ++ + G TF L+
Sbjct: 130 VFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDAL 189
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR--DENLEEAVKVLNLMVKKGVAP 365
+ G + ++ M + + D Y+ L+ C+ D + + + L + K +P
Sbjct: 190 CRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSP 249
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLK 425
+ + + + + +MK P+ + Y I+++ + KL
Sbjct: 250 GLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLF 309
Query: 426 KEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRK 485
E+ + P+V TY + I C++ A K+M M + S +PN+ Y +++ L K
Sbjct: 310 DELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGS-EPNVVTYNILIKALVK 368
Query: 486 AGQLKMHEELVEKMVARG 503
AG L + L ++M G
Sbjct: 369 AGDLSRAKTLWKEMETNG 386
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 182/398 (45%), Gaps = 37/398 (9%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV 194
+L D A L+ M+T G+ T++ +I + G+ +A+ F +M GV P+ V
Sbjct: 294 QLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 195 AVSIVVSSL-CRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
+ VS+ C K + ++ +VK F DV++ SL+ + + GK+E A ++F +
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRT 313
K+ +V+T++ +I C+ G +A+++F M DA PN +T+N+++ ++K G
Sbjct: 414 KN----KDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDE 469
Query: 314 EKVLQVFNQM-KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNS 372
+ + +F +M K +T +N +I + ++ +EA+++ M PNS T S
Sbjct: 470 GEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILS 529
Query: 373 ----------------IFGCIAK-----LHDV-NGAHRMYAKMKELNC---------LPN 401
I GC+ + +H V N YAK ++ +
Sbjct: 530 LLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKD 589
Query: 402 TLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMK 461
+T+N L+ + S L L +M + PN T +IL G+ + K+
Sbjct: 590 IITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFY 649
Query: 462 EMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
+ + + P L+ ++ L +A +L+ + +++M
Sbjct: 650 SIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEM 687
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 149/308 (48%), Gaps = 30/308 (9%)
Query: 168 YVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPD 226
Y + G A F RM + D +A + V+ + C+ + EEA + K+ P
Sbjct: 226 YAKCGELDFATKFFRRMRE----RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPG 281
Query: 227 VILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFA 286
++ + LI G+ + GK + A ++ + M+ GI +V T++ +I L G +A D+F
Sbjct: 282 LVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFR 341
Query: 287 EMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGY-------NFLI 339
+M AG PNAVT S A L+V NQ + A +G+ N L+
Sbjct: 342 KMFLAGVVPNAVTIMS-------AVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV 394
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
+ + + LE+A KV + + K V T+NS+ + A+ ++ +M++ N
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNKDVY----TWNSMITGYCQAGYCGKAYELFTRMQDANLR 450
Query: 400 PNTLTYNILMRMFA----ESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNN 455
PN +T+N ++ + E +++D+ +++K + +V+ N T+ ++I + + G +
Sbjct: 451 PNIITWNTMISGYIKNGDEGEAMDLFQRMEK---DGKVQRNTATWNLIIAGYIQNGKKDE 507
Query: 456 AYKLMKEM 463
A +L ++M
Sbjct: 508 ALELFRKM 515
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 135/298 (45%), Gaps = 16/298 (5%)
Query: 146 IDSMKTRGVEITAETFSVLIRRYVRAGLA--AEAVHAFNRMEDYGV--APDKVAVSIVVS 201
+DS+ +G ++ T+ L+ + +G +HA +G+ PD + ++S
Sbjct: 69 LDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA-----RFGLFTEPDVFVETKLLS 123
Query: 202 SLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPN 261
+ +A+ FDS+++R ++ ++++I + R + ++F+ M G+ P+
Sbjct: 124 MYAKCGCIADARKVFDSMRER---NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPD 180
Query: 262 VHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFN 321
+ ++ CG + + + +I G + NS++ V+ K G + + F
Sbjct: 181 DFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFR 240
Query: 322 QMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLH 381
+M+ D I +N ++ +C++ EEAV+++ M K+G++P T+N + G +L
Sbjct: 241 RMRE----RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG 296
Query: 382 DVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNT 439
+ A + KM+ + T+ ++ + L + ++M V PN T
Sbjct: 297 KCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 143/318 (44%), Gaps = 27/318 (8%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
++D+ K + A + DS+K + V T++ +I Y +AG +A F RM+D
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKNKDVY----TWNSMITGYCQAGYCGKAYELFTRMQDAN 448
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK--DRFEPDVILYTSLIHGWCRAGKIERA 246
+ P+ + + ++S + EA F ++ + + + + +I G+ + GK + A
Sbjct: 449 LRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEA 508
Query: 247 EEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDA--GC----NPNAV-- 298
E+F+ M+ + PN T ++ L C + + A+M+ GC N +A+
Sbjct: 509 LELFRKMQFSRFMPNSVT---ILSLLPACANL-----LGAKMVREIHGCVLRRNLDAIHA 560
Query: 299 TFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLM 358
N+L + K+G E +F M+ D I +N LI + + A+ + N M
Sbjct: 561 VKNALTDTYAKSGDIEYSRTIFLGME----TKDIITWNSLIGGYVLHGSYGPALALFNQM 616
Query: 359 VKKGVAPNSSTFNSIFGCIAKLHDVN-GAHRMYAKMKELNCLPNTLTYNILMRMFAESKS 417
+G+ PN T +SI + +V+ G Y+ + + +P + ++ ++ +
Sbjct: 617 KTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANR 676
Query: 418 IDMVLKLKKEMDENQVEP 435
++ L+ +EM+ P
Sbjct: 677 LEEALQFIQEMNIQSETP 694
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 127/241 (52%), Gaps = 6/241 (2%)
Query: 161 FSVLIRRYVRAGLAAEA---VHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFD 217
++ L++ Y++ G A+ + A R +D PD+V + VVS+ + A+
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 218 SVKDRFEP-DVILYTSLIHGWCRAGKIERAEEIFKDM-KDAGIKPNVHTYSIVIDSLCRC 275
+ P + I Y L+ G+C+ +I+RAE++ ++M +DAGI+P+V +Y+I+ID
Sbjct: 477 EMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILI 536
Query: 276 GQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF-NCAADTIG 334
A F EM G P +++ +LM+ +G+ + +VF++M D I
Sbjct: 537 DDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIA 596
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMK 394
+N L+E +CR +E+A +V++ M + G PN +T+ S+ +++ A ++ ++K
Sbjct: 597 WNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIK 656
Query: 395 E 395
E
Sbjct: 657 E 657
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 6/247 (2%)
Query: 190 APDKVAVSIVVSSLCRKRRAEEAQSFFDSVK---DR-FEPDVILYTSLIHGWCRAGKIER 245
APD + ++ + R + ++++ DR PD + YT+++ + AG ++R
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 246 AEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMI-DAGCNPNAVTFNSLM 304
A ++ +M G+ N TY++++ C+ QI RA D+ EM DAG P+ V++N ++
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLN-LMVKKGV 363
+ + L FN+M+ A I Y L++ + A +V + +M V
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 364 APNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLK 423
+ +N + +L + A R+ ++MKE PN TY L ++++ L
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALL 650
Query: 424 LKKEMDE 430
L KE+ E
Sbjct: 651 LWKEIKE 657
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 117/253 (46%), Gaps = 5/253 (1%)
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMK---DAGIKPNVHTYSIVIDSLCRCGQIT 279
F PD +YT+L+ G+ + G++ + + M+ D P+ TY+ V+ + G +
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM-KRFNCAADTIGYNFL 338
RA V AEM G N +T+N L++ + K + ++ + +M + D + YN +
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM-KELN 397
I+ ++ A+ N M +G+AP ++ ++ A A+R++ +M +
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 398 CLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAY 457
+ + +N+L+ + I+ ++ M EN PNV TY L + +A
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDAL 649
Query: 458 KLMKEMVEEKSLK 470
L KE+ E ++K
Sbjct: 650 LLWKEIKERCAVK 662
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 165/412 (40%), Gaps = 73/412 (17%)
Query: 156 ITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR--AEEAQ 213
+ A + +L ++G AV M G P A + V+SL EE+
Sbjct: 151 LDANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESI 210
Query: 214 SFFDSVKDRFE------------PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPN 261
F ++ R + PD + ++++ G ++ ++F++M + +P+
Sbjct: 211 KLFIAITRRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPD 270
Query: 262 VHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAG--RT-EKVLQ 318
V TY+++I R G+ V +ID G T +SL+ +V G RT E+++Q
Sbjct: 271 VLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQ 330
Query: 319 VFNQMKRFNCAADTIGYNFLIECH----------------------------CRDENLEE 350
+ +R C L EC+ RDE EE
Sbjct: 331 AMREKRRDLC-------KVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEE 383
Query: 351 AV-----KVL---------NLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMK-- 394
V K+L ++ K AP+S + ++ K V RM M+
Sbjct: 384 GVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQ 443
Query: 395 -ELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHW 453
+ N P+ +TY ++ F + +D ++ EM V N TY +L+ +C++
Sbjct: 444 DDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQI 503
Query: 454 NNAYKLMKEMVEEKSLKPNLQVYENVLE----LLRKAGQLKMHEELVEKMVA 501
+ A L++EM E+ ++P++ Y +++ + AG L E+ + +A
Sbjct: 504 DRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIA 555
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 138 HFDLAWHLIDSM-KTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
D A L+ M + G+E +++++I + +A A+ FN M G+AP K++
Sbjct: 502 QIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISY 561
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVKD--RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMK 254
+ ++ + + + A FD + + R + D+I + L+ G+CR G IE A+ + MK
Sbjct: 562 TTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMK 621
Query: 255 DAGIKPNVHTYS 266
+ G PNV TY
Sbjct: 622 ENGFYPNVATYG 633
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 19/224 (8%)
Query: 191 PDKVAVSIVVSSLCRKRRAEE---AQSFFDSVKDRFEPDVILYTSL---IHGWCRAGKIE 244
P +S +VS L + + E AQS +++ + + SL ++G+
Sbjct: 111 PGPTCLSRLVSQLSYQSKPESLTRAQSILTRLRNERQLHRLDANSLGLLAMAAAKSGQTL 170
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQ------------ITRAHDVFAEMIDAG 292
A + K M +G P+V ++ + SL G ITR F + G
Sbjct: 171 YAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIKLFIAITRRVKRFGDQSLVG 230
Query: 293 -CNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEA 351
P+ FN+++ G T+K ++F +M ++C D + YN +I+ R E
Sbjct: 231 QSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELI 290
Query: 352 VKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKE 395
V VL ++ KG+ +T +S+ D+ A R+ M+E
Sbjct: 291 VFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMRE 334
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 28/194 (14%)
Query: 131 DLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRM-EDYGV 189
D AG L F+ M+TRG+ T +++ L++ + +G A F+ M D V
Sbjct: 538 DSAGALAFFN-------EMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 190 APDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEE 248
D +A +++V CR E+AQ +K+ F P+V Y SL +G +A K A
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALL 650
Query: 249 IFKDMKD-------------------AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMI 289
++K++K+ +KP+ + D R +A ++ A M
Sbjct: 651 LWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACME 710
Query: 290 DAGCNPNAVTFNSL 303
+ G PN + +
Sbjct: 711 ENGIPPNKTKYKKI 724
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 170/385 (44%), Gaps = 43/385 (11%)
Query: 118 NFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEA 177
+F + Y+ +++ K D A+ +ID+M+ G+ T +S +I + G EA
Sbjct: 542 DFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEA 601
Query: 178 VHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRF-EPDVILYTSLIHG 236
F +M + G+ PD++A I++++ R R +EA + V F P YT LI G
Sbjct: 602 EETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISG 661
Query: 237 WCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPN 296
+ + G +E+ + M + G+ PNV Y+ +I + G + +F M + +
Sbjct: 662 FVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHD 721
Query: 297 AVTFNSLM-------------RVHVKAGRTEKVLQVFNQMKRF-------------NCAA 330
+ + +L+ +V V+ G+ EK+LQ + K + A
Sbjct: 722 HIAYITLLSGLWRAMARKKKRQVIVEPGK-EKLLQRLIRTKPLVSIPSSLGNYGSKSFAM 780
Query: 331 DTIG------------YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
+ IG +N +I +C L+EA L M K+G+ PN T+ +
Sbjct: 781 EVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHI 840
Query: 379 KLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVN 438
+ D+ A ++ + NC P+ + Y+ L++ + K L L EM ++ + PN +
Sbjct: 841 EAGDIESAIDLF---EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKD 897
Query: 439 TYRILILMFCEKGHWNNAYKLMKEM 463
+Y L+ C A K++K+M
Sbjct: 898 SYEKLLQCLCYSRLTMEAVKVVKDM 922
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 175/378 (46%), Gaps = 32/378 (8%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
R++ A I+ M G +++ +I+ + + + N +++ PD
Sbjct: 491 RNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTY 550
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD 255
IVV+ LC+K + A + D++++ P V +Y+S+I + G++ AEE F M +
Sbjct: 551 LIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLE 610
Query: 256 AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEK 315
+GI+P+ Y I+I++ R G+I A+++ E++ P++ T+ L+ VK G EK
Sbjct: 611 SGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEK 670
Query: 316 VLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFG 375
Q ++M + + + Y LI + + + + + LM + + +
Sbjct: 671 GCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDH-------- 722
Query: 376 CIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMF----------------AESKSID 419
IA + ++G R A+ K+ + +L R+ ++S +++
Sbjct: 723 -IAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAME 781
Query: 420 MVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENV 479
++ K+KK + PN+ + +I +C G + AY ++ M +++ + PNL Y +
Sbjct: 782 VIGKVKK-----SIIPNLYLHNTIITGYCAAGRLDEAYNHLESM-QKEGIVPNLVTYTIL 835
Query: 480 LELLRKAGQLKMHEELVE 497
++ +AG ++ +L E
Sbjct: 836 MKSHIEAGDIESAIDLFE 853
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 168/381 (44%), Gaps = 19/381 (4%)
Query: 117 KNFPSSPEPYIEMLDLAGKLRHFDLAWHL-IDSMKTRGVEITAETFSVLIRRYVRAGLAA 175
K S+ Y M+ K + D A L +++ + + ++ LI + + G
Sbjct: 336 KGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMD 395
Query: 176 EAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR---FEPDVILYTS 232
+AV RM D G+ PD + +++ L + + A S+ D P VI
Sbjct: 396 KAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVID--- 452
Query: 233 LIHGWCRAGKIE-RAEEIFKDM--KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMI 289
G IE + E + ++ KDA + ++V +LC A +M+
Sbjct: 453 ------DLGNIEVKVESLLGEIARKDANLAA--VGLAVVTTALCSQRNYIAALSRIEKMV 504
Query: 290 DAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLE 349
+ GC P ++NS+++ + E + + N ++ + D Y ++ C+ + +
Sbjct: 505 NLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRD 564
Query: 350 EAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILM 409
A +++ M + G+ P + ++SI G + K V A +AKM E P+ + Y I++
Sbjct: 565 AAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMI 624
Query: 410 RMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSL 469
+A + ID +L +E+ ++ + P+ TY +LI F + G + + +M+E+ L
Sbjct: 625 NTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLED-GL 683
Query: 470 KPNLQVYENVLELLRKAGQLK 490
PN+ +Y ++ K G K
Sbjct: 684 SPNVVLYTALIGHFLKKGDFK 704
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 149/348 (42%), Gaps = 47/348 (13%)
Query: 114 TSLKNFPSSPEP----YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYV 169
T K S +P Y+ M++ + D A L++ + + ++ T++VLI +V
Sbjct: 604 TFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFV 663
Query: 170 RAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVI 228
+ G+ + ++M + G++P+ V + ++ +K + + + F + ++ + D I
Sbjct: 664 KMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHI 723
Query: 229 LYTSLIHGWCRA--------------------------------------GKIERAEEIF 250
Y +L+ G RA G A E+
Sbjct: 724 AYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVI 783
Query: 251 KDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKA 310
+K + I PN++ ++ +I C G++ A++ M G PN VT+ LM+ H++A
Sbjct: 784 GKVKKS-IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEA 842
Query: 311 GRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
G E + +F NC D + Y+ L++ C + +A+ ++ M K G+ PN ++
Sbjct: 843 GDIESAIDLFEGT---NCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSY 899
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSI 418
+ C+ A ++ M L+ P ++ + L+ + E K +
Sbjct: 900 EKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKL 947
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 139/306 (45%), Gaps = 5/306 (1%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV 194
KLR FD A +D + G + + S+++ EA H F ++++ G
Sbjct: 143 KLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLW 202
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDSV--KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKD 252
+ LC EA D++ R V LY SL + +C+ G AE +F
Sbjct: 203 CCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDH 262
Query: 253 MKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGR 312
M+ G + Y+ ++ C+ +T A ++ M++ + FN+L+ +K G
Sbjct: 263 MEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGM 322
Query: 313 TEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKV-LNLMVKKGVAPNSSTF- 370
+K +F+QM + ++ Y+ +I +C++ N++ A+++ +N + ++ N +
Sbjct: 323 LDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYT 382
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE 430
N IFG K ++ A + +M + +P+ +TY +L++M + + + + + + +
Sbjct: 383 NLIFG-FYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILD 441
Query: 431 NQVEPN 436
N N
Sbjct: 442 NGCGIN 447
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 146/360 (40%), Gaps = 46/360 (12%)
Query: 153 GVEITAETFSVLIRRYVRAGLAAEAVHAFN-RMEDYGVAPDKVAVSIVVSSLCRKRRAEE 211
G+E+ + + LIR+ G A +N R+ G+ PD + +V L + RR +E
Sbjct: 90 GIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDE 149
Query: 212 AQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVID 270
A++ D + + P + ++ C + A F+ +K+ G + +
Sbjct: 150 ARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFK 209
Query: 271 SLCRCGQITRAHDVFAEMIDAGCNPNAV-----TFNSLMRVHVKAGRTEKVLQVFNQMKR 325
LC G + A M+D C + + SL K G + +F+ M+
Sbjct: 210 GLCGHGHLNEA----IGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEV 265
Query: 326 FNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNG 385
D + Y L++ +C+D N+ A+++ MV++ + FN++ KL ++
Sbjct: 266 DGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDK 325
Query: 386 AHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILIL 445
M+++M +KK V+ NV TY I+I
Sbjct: 326 GRVMFSQM------------------------------IKK-----GVQSNVFTYHIMIG 350
Query: 446 MFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
+C++G+ + A +L + + N+ Y N++ K G + +L+ +M+ G V
Sbjct: 351 SYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIV 410
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 8/203 (3%)
Query: 201 SSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
SSL A VK P++ L+ ++I G+C AG+++ A + M+ GI P
Sbjct: 768 SSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVP 827
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
N+ TY+I++ S G I A D+F C P+ V +++L++ R L +
Sbjct: 828 NLVTYTILMKSHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLKGLCDFKRPLDALALM 884
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+M++ + Y L++C C EAVKV+ M + P S + + +
Sbjct: 885 LEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEE 944
Query: 381 HDVNGAHRMYAKMKE-----LNC 398
+ A ++A M + LNC
Sbjct: 945 KKLREARALFAIMVQSGRSLLNC 967
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 183/402 (45%), Gaps = 12/402 (2%)
Query: 106 SLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSM---KTRGVEITAETFS 162
+L+ F WA + S E Y+ + D + R F L + M + +++ ++
Sbjct: 188 ALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYN 247
Query: 163 VLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR 222
+I+ +A A F + ++ G D + ++ K +A ++S++
Sbjct: 248 QVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME-- 305
Query: 223 FEPDVIL----YTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
+ D +L Y +I ++G+++ A ++F+ MK+ ++P+ +S ++DS+ + G++
Sbjct: 306 -KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
+ V+ EM G P+A F SL+ + KAG+ + L+++++MK+ + Y +
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNC 398
IE H + LE A+ V M K G P ST++ + A V+ A ++Y M
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Query: 399 LPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYK 458
P +Y L+ + A + +D+ K+ EM +V +L +++ + + A K
Sbjct: 485 RPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVL-MIYIKDASVDLALK 543
Query: 459 LMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
++ M +K N + + E K G L+E +V
Sbjct: 544 WLRFM-GSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLV 584
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 142/318 (44%), Gaps = 10/318 (3%)
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFK-DM 253
+V+ +V + R + E ++ D K +F P+++ T + +++ A +F+
Sbjct: 142 SVAKIVEVVQRWKWGPELETQLD--KLQFVPNMVHITQSLK---IVKEVDAALSLFRWAK 196
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNS---LMRVHVKA 310
K P+ Y ++ D L + +F EM+ + ++FN+ +++ KA
Sbjct: 197 KQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKA 256
Query: 311 GRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
+ E F + + C DT YN L+ +A ++ M K + ST+
Sbjct: 257 EKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTY 316
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE 430
I +AK ++ A +++ +MKE P+ ++ L+ ++ +D +K+ EM
Sbjct: 317 ELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQG 376
Query: 431 NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK 490
P+ + LI + + G + A +L EM ++ +PN +Y ++E K+G+L+
Sbjct: 377 FGHRPSATMFVSLIDSYAKAGKLDTALRLWDEM-KKSGFRPNFGLYTMIIESHAKSGKLE 435
Query: 491 MHEELVEKMVARGFVSRP 508
+ + + M GF+ P
Sbjct: 436 VAMTVFKDMEKAGFLPTP 453
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 151/315 (47%), Gaps = 21/315 (6%)
Query: 77 SAAHP--ISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEM-LDLA 133
+ A+P I+ S A+ + K + Y+S++ N +TS P S +E+ +
Sbjct: 24 TTAYPGAITMSKAKSKLRKVQDPDKALAIYKSVS--NNSTS----PLSSRYAMELTVQRL 77
Query: 134 GKLRHFDLAWHLIDSMKTRGVEITAETF-SVLIRRYVRAGLAAEAVHAFNRMEDYGVAPD 192
K + F LI+S K +I ETF S LIR Y RA + A+ F M+ G
Sbjct: 78 AKSQRFSDIEALIESHKN-NPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRT 136
Query: 193 KVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFE---PDVILYTSLIHGWCRAGKIERAEEI 249
V+ + ++++ E FD R+ PD I Y LI +C +GK E+A EI
Sbjct: 137 VVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEI 196
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVK 309
+DM+ G++ + ++ ++ SL + G + A ++ EM++ GC+ + +N + K
Sbjct: 197 MRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAK 256
Query: 310 AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSST 369
E+V ++ +M DT+ YN+L+ +C + EA KV + + PN++T
Sbjct: 257 ES-PERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ----PNAAT 311
Query: 370 FNSIFG--CIAKLHD 382
F ++ CI L+D
Sbjct: 312 FRTLIFHLCINGLYD 326
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 11/295 (3%)
Query: 191 PDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIF 250
P + +S S L + + ++A + + SV + + ++ R K +R +I
Sbjct: 28 PGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIE 87
Query: 251 KDMKDAGIKPNVHT---YSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
++ P + T S +I S R A +F EM G V+FN+L+
Sbjct: 88 ALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAAC 147
Query: 308 VKAGRTEKVLQVFNQM-KRFN-CAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
+ + E+V Q+F++ +R+N D I Y LI+ +C E+A++++ M KGV
Sbjct: 148 LHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEV 207
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLK 425
F +I G + K V+ A ++ +M C + YN+ + M A +S + V +L
Sbjct: 208 TIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRL-MNAAKESPERVKELM 266
Query: 426 KEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVL 480
+EM ++P+ +Y L+ +C KG + A K V E +PN + ++
Sbjct: 267 EEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKK-----VYEGLEQPNAATFRTLI 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 128/277 (46%), Gaps = 16/277 (5%)
Query: 193 KVAVSIVVSSLCRKRRAEEAQSFFDSVKD--RFEPDVILYTSLIHGWCRAGKIERAEEIF 250
+ A+ + V L + +R + ++ +S K+ + + + L T LI + RA + A ++F
Sbjct: 67 RYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLST-LIRSYGRASMFDHAMKMF 125
Query: 251 KDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCN--PNAVTFNSLMRVHV 308
++M G V +++ ++ + R +F E N P+ +++ L++ +
Sbjct: 126 EEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYC 185
Query: 309 KAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSS 368
+G+ EK +++ M+ I + ++ ++ ++EA + MV KG +++
Sbjct: 186 DSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNT 245
Query: 369 TFNSIFGCIAKLHDVNGAHRMYAKMKELNCL---PNTLTYNILMRMFAESKSIDMVLKLK 425
+N AK R+ M+E++ + P+T++YN LM + + ++
Sbjct: 246 VYNVRLMNAAK----ESPERVKELMEEMSSVGLKPDTVSYNYLMTAYC----VKGMMSEA 297
Query: 426 KEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
K++ E +PN T+R LI C G ++ + K+
Sbjct: 298 KKVYEGLEQPNAATFRTLIFHLCINGLYDQGLTVFKK 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 103/226 (45%), Gaps = 8/226 (3%)
Query: 139 FDLAWHLIDSMKTRGVEITAE--TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
F+ L D R IT + ++ +LI+ Y +G +A+ ME GV +A
Sbjct: 153 FERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAF 212
Query: 197 SIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD 255
+ ++ SL + +EA+S + + V + D +Y + + ER +E+ ++M
Sbjct: 213 TTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESP-ERVKELMEEMSS 271
Query: 256 AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEK 315
G+KP+ +Y+ ++ + C G ++ A V+ + PNA TF +L+ G ++
Sbjct: 272 VGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGL----EQPNAATFRTLIFHLCINGLYDQ 327
Query: 316 VLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKK 361
L VF + + D L E ++ +E+A V ++ KK
Sbjct: 328 GLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDARGVARIVKKK 373
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 152/336 (45%), Gaps = 6/336 (1%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
M+ + G + F++AW LI M + F +++ RY A ++A+ F+ M+ +
Sbjct: 161 MIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMF-LMMDRYAAANDTSQAIRTFDIMDKFK 219
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAG-KIERAE 247
P A ++ +LCR E+A+ F + K F DV + +++GWC + A+
Sbjct: 220 HTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAK 279
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
I+++M + I PN +YS +I + G + + ++ EM G P +NSL+ V
Sbjct: 280 RIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVL 339
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
+ ++ +++ ++ D++ YN +I C L+ A VL M+ + ++P
Sbjct: 340 TREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTV 399
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKE 427
TF++ + + + +MK + P T+ +++ + K + LK+ E
Sbjct: 400 DTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAE 455
Query: 428 MDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
MD ++ N Y I G A ++ EM
Sbjct: 456 MDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEM 491
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 102/234 (43%), Gaps = 9/234 (3%)
Query: 267 IVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF 326
+++D ++A F M P F L+ + G EK + K+
Sbjct: 194 LMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKL 253
Query: 327 NCAADTIGYNFLIECHCRD-ENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNG 385
D G+N ++ C ++ EA ++ M + PN +++ + C +K+ ++
Sbjct: 254 -FPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 386 AHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILIL 445
+ R+Y +MK+ P YN L+ + D +KL K+++E ++P+ TY +I
Sbjct: 313 SLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIR 372
Query: 446 MFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE------LLRKAGQLKMHE 493
CE G + A ++ M+ E +L P + + LE L GQ+K+ +
Sbjct: 373 PLCEAGKLDVARNVLATMISE-NLSPTVDTFHAFLEAVNFEKTLEVLGQMKISD 425
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 98/200 (49%), Gaps = 3/200 (1%)
Query: 303 LMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKG 362
+M + A T + ++ F+ M +F + L+ CR ++E+A + + L KK
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM-LASKKL 253
Query: 363 VAPNSSTFNSIF-GCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMV 421
+ FN I G DV A R++ +M PN +Y+ ++ F++ ++
Sbjct: 254 FPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDS 313
Query: 422 LKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
L+L EM + + P + Y L+ + + ++ A KLMK++ EE LKP+ Y +++
Sbjct: 314 LRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEE-GLKPDSVTYNSMIR 372
Query: 482 LLRKAGQLKMHEELVEKMVA 501
L +AG+L + ++ M++
Sbjct: 373 PLCEAGKLDVARNVLATMIS 392
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 95/212 (44%), Gaps = 7/212 (3%)
Query: 116 LKNFPSSP--EPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGL 173
+ N+ +P + Y M+ K+ + + L D MK RG+ E ++ L+ R
Sbjct: 285 MGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDC 344
Query: 174 AAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTS 232
EA+ ++ + G+ PD V + ++ LC + + A++ + + + P V +
Sbjct: 345 FDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTF-- 402
Query: 233 LIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAG 292
H + A E+ E+ MK + + P T+ +++ L + Q A ++AEM
Sbjct: 403 --HAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFE 460
Query: 293 CNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMK 324
N + + ++ + G EK +++++MK
Sbjct: 461 IVANPALYLATIQGLLSCGWLEKAREIYSEMK 492
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 165/358 (46%), Gaps = 29/358 (8%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV 219
TF +L++ V +A+ M G D V S ++ + A+ + +
Sbjct: 203 TFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQEL 262
Query: 220 KDR---FEPDVILYTSLIHGWCRAGKIERAEEIFKDM--KDAGIKPNVHTYSIVIDSLCR 274
K++ F D ++Y L+ G+ + A E +++ +++ ++ + Y+ V+++L
Sbjct: 263 KEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSE 322
Query: 275 CGQITRAHDVFAEMIDAGCNP------NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNC 328
G+ A +F + + NP N TFN ++ + G+ E+ ++VF QM F C
Sbjct: 323 NGKFDEALKLF-DAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKC 381
Query: 329 AADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHR 388
+ DT+ +N L+ C +E L EA K+ M +K V P+ T+ + K ++
Sbjct: 382 SPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAA 441
Query: 389 MYAKMKELNCLPNTLTYNILMRMFAESKSID--------MVLKLKKEMDENQVEPNVNTY 440
Y M E N PN YN L ++ +D MV KLK MD+ Y
Sbjct: 442 YYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLK--MDD-------EAY 492
Query: 441 RILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEK 498
+ ++ E G + K++ EM+++ +++ + ++ E V E LRK G+ E+L+E+
Sbjct: 493 KFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKGGREGDLEKLMEE 550
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 152/336 (45%), Gaps = 14/336 (4%)
Query: 178 VHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR--FEPDVILYTSLIH 235
+H F + G+AP+ + +++ + R+ E A + D P + + L+
Sbjct: 152 LHGF--INQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVK 209
Query: 236 GWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMID--AGC 293
G +E+A EI +DM G + YS ++ + ++ E+ + G
Sbjct: 210 GLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGF 269
Query: 294 NPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAA--DTIGYNFLIECHCRDENLEEA 351
+ V + LM+ + ++ ++ + + N + YN+++E + +EA
Sbjct: 270 VDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEA 329
Query: 352 VKVLNLMVK-----KGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYN 406
+K+ + + K + +A N TFN + A ++ +M + C P+TL++N
Sbjct: 330 LKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFN 389
Query: 407 ILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEE 466
LM +++ + KL EM+E V+P+ TY +L+ ++G + K MVE
Sbjct: 390 NLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVE- 448
Query: 467 KSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
+L+PNL VY + + L KAG+L + + MV++
Sbjct: 449 SNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK 484
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 105/203 (51%), Gaps = 10/203 (4%)
Query: 127 IEMLDLAGKLRHFDLAWHLIDSMKT-----RGVEITAETFSVLIRRYVRAGLAAEAVHAF 181
+E L GK FD A L D++K R + + TF+V++ Y G EA+ F
Sbjct: 317 LEALSENGK---FDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVF 373
Query: 182 NRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRA 240
+M D+ +PD ++ + +++ LC EA+ + ++++ +PD Y L+ +
Sbjct: 374 RQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKE 433
Query: 241 GKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTF 300
GKI+ +K M ++ ++PN+ Y+ + D L + G++ A F +M+ + + +
Sbjct: 434 GKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLKMDDEAY 492
Query: 301 NSLMRVHVKAGRTEKVLQVFNQM 323
+MR +AGR +++L++ ++M
Sbjct: 493 KFIMRALSEAGRLDEMLKIVDEM 515
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 134/329 (40%), Gaps = 42/329 (12%)
Query: 200 VSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI 258
+ L R+ EEA + SV P + +++ R K ++ + AGI
Sbjct: 102 ILKLIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGI 161
Query: 259 KPNVHTYSIVIDSLCRCGQITRAHDVFAEMID-AGCNPNAVTFNSLMRVHVKAGRTEKVL 317
PN+ TY+++ + + A + + ID A NP+ TF L++ V EK +
Sbjct: 162 APNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAM 221
Query: 318 QVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKK--GVAPNSSTFNSIFG 375
++ M D + Y++L+ ++ + + +K+ + +K G + + +
Sbjct: 222 EIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMK 281
Query: 376 -------------CIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVL 422
C + N RM A + YN ++ +E+ D L
Sbjct: 282 GYFMKEMEKEAMECYEEAVGENSKVRMSA-----------MAYNYVLEALSENGKFDEAL 330
Query: 423 KLKKEMDENQVEP-----NVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYE 477
KL + + P N+ T+ +++ +C G + A ++ ++M + K P+ +
Sbjct: 331 KLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKC-SPDTLSFN 389
Query: 478 NVL------ELLRKAGQLKMHEELVEKMV 500
N++ ELL +A K++ E+ EK V
Sbjct: 390 NLMNQLCDNELLAEAE--KLYGEMEEKNV 416
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 156/323 (48%), Gaps = 11/323 (3%)
Query: 191 PDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRF-EPDVILYTSLI----HGWCRAGKIER 245
PD S ++S + +K + A F +K+ PD +Y +LI H +A +E+
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 246 AEEIFKDMKDAGI---KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNS 302
MK GI +PNV TY+I++ + + G++ + + +F ++ + +P+ TFN
Sbjct: 191 VRGYLDKMK--GIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 303 LMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKG 362
+M + K G +++ V +M+ C D I +N LI+ + + + E+ + +++
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 363 VAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVL 422
P TFNS+ K ++ A ++ KM ++N +P+ +TY ++ M+ S+
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAR 368
Query: 423 KLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLEL 482
++ +E+ E+ +T ++ ++C G + A KL + + P+ Y+ + +
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFR-VHPDASTYKFLYKA 427
Query: 483 LRKAGQLKMHEELVEKMVARGFV 505
KA + + L++KM G V
Sbjct: 428 YTKADMKEQVQILMKKMEKDGIV 450
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 1/212 (0%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV 219
TF+ ++ Y + G+ E RM PD + ++++ S +K+ E+ + F S+
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Query: 220 -KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
+ + +P + + S+I + +A I++AE +FK M D P+ TY +I CG +
Sbjct: 305 MRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSV 364
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
+RA ++F E+ ++ A T N+++ V+ + G + ++F+ F D Y FL
Sbjct: 365 SRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFL 424
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
+ + + + E+ ++ M K G+ PN F
Sbjct: 425 YKAYTKADMKEQVQILMKKMEKDGIVPNKRFF 456
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 141/317 (44%), Gaps = 41/317 (12%)
Query: 161 FSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPD-KVAVSIVVSSLCRKRRA---EEAQSFF 216
+S LI + G A+ F+ M++ G PD V +++ + L + +A E+ + +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 217 DSVK--DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
D +K +R +P+V+ Y L+ + ++GK+++ +FKD+ + + P+V+T++ V+D+ +
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 275 CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIG 334
G I V M C P+ +TFN L+ + K EK+ Q F + R
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIF------GCIAKLHDV----- 383
+N +I + + +++A V M P+ T+ + G +++ ++
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVG 375
Query: 384 --------------------NG----AHRMYAKMKELNCLPNTLTYNILMRMFAESKSID 419
NG A +++ P+ TY L + + ++ +
Sbjct: 376 ESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKE 435
Query: 420 MVLKLKKEMDENQVEPN 436
V L K+M+++ + PN
Sbjct: 436 QVQILMKKMEKDGIVPN 452
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 121/256 (47%), Gaps = 4/256 (1%)
Query: 150 KTRGVEI---TAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRK 206
K +G+E T+++L+R + ++G + F ++ V+PD + V+ + +
Sbjct: 197 KMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKN 256
Query: 207 RRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTY 265
+E ++ ++ + +PD+I + LI + + + E+ E+ FK + + KP + T+
Sbjct: 257 GMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTF 316
Query: 266 SIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR 325
+ +I + + I +A VF +M D P+ +T+ ++ ++ G + ++F ++
Sbjct: 317 NSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGE 376
Query: 326 FNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNG 385
+ N ++E +CR+ EA K+ + V P++ST+ ++ K
Sbjct: 377 SDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQ 436
Query: 386 AHRMYAKMKELNCLPN 401
+ KM++ +PN
Sbjct: 437 VQILMKKMEKDGIVPN 452
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 156/323 (48%), Gaps = 11/323 (3%)
Query: 191 PDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRF-EPDVILYTSLI----HGWCRAGKIER 245
PD S ++S + +K + A F +K+ PD +Y +LI H +A +E+
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 246 AEEIFKDMKDAGI---KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNS 302
MK GI +PNV TY+I++ + + G++ + + +F ++ + +P+ TFN
Sbjct: 191 VRGYLDKMK--GIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 303 LMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKG 362
+M + K G +++ V +M+ C D I +N LI+ + + + E+ + +++
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 363 VAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVL 422
P TFNS+ K ++ A ++ KM ++N +P+ +TY ++ M+ S+
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAR 368
Query: 423 KLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLEL 482
++ +E+ E+ +T ++ ++C G + A KL + + P+ Y+ + +
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFR-VHPDASTYKFLYKA 427
Query: 483 LRKAGQLKMHEELVEKMVARGFV 505
KA + + L++KM G V
Sbjct: 428 YTKADMKEQVQILMKKMEKDGIV 450
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 1/212 (0%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV 219
TF+ ++ Y + G+ E RM PD + ++++ S +K+ E+ + F S+
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Query: 220 -KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
+ + +P + + S+I + +A I++AE +FK M D P+ TY +I CG +
Sbjct: 305 MRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSV 364
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
+RA ++F E+ ++ A T N+++ V+ + G + ++F+ F D Y FL
Sbjct: 365 SRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFL 424
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
+ + + + E+ ++ M K G+ PN F
Sbjct: 425 YKAYTKADMKEQVQILMKKMEKDGIVPNKRFF 456
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 141/317 (44%), Gaps = 41/317 (12%)
Query: 161 FSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPD-KVAVSIVVSSLCRKRRA---EEAQSFF 216
+S LI + G A+ F+ M++ G PD V +++ + L + +A E+ + +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 217 DSVK--DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
D +K +R +P+V+ Y L+ + ++GK+++ +FKD+ + + P+V+T++ V+D+ +
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 275 CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIG 334
G I V M C P+ +TFN L+ + K EK+ Q F + R
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIF------GCIAKLHDV----- 383
+N +I + + +++A V M P+ T+ + G +++ ++
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVG 375
Query: 384 --------------------NG----AHRMYAKMKELNCLPNTLTYNILMRMFAESKSID 419
NG A +++ P+ TY L + + ++ +
Sbjct: 376 ESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKE 435
Query: 420 MVLKLKKEMDENQVEPN 436
V L K+M+++ + PN
Sbjct: 436 QVQILMKKMEKDGIVPN 452
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 121/256 (47%), Gaps = 4/256 (1%)
Query: 150 KTRGVEI---TAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRK 206
K +G+E T+++L+R + ++G + F ++ V+PD + V+ + +
Sbjct: 197 KMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKN 256
Query: 207 RRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTY 265
+E ++ ++ + +PD+I + LI + + + E+ E+ FK + + KP + T+
Sbjct: 257 GMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTF 316
Query: 266 SIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR 325
+ +I + + I +A VF +M D P+ +T+ ++ ++ G + ++F ++
Sbjct: 317 NSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGE 376
Query: 326 FNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNG 385
+ N ++E +CR+ EA K+ + V P++ST+ ++ K
Sbjct: 377 SDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQ 436
Query: 386 AHRMYAKMKELNCLPN 401
+ KM++ +PN
Sbjct: 437 VQILMKKMEKDGIVPN 452
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 195/457 (42%), Gaps = 60/457 (13%)
Query: 60 PSPTLTIPDLALEFSRLSAAHPISPSTARRVIEKCGAI-------RHGIPFYQSLAFFNW 112
PS +L+IP L+L P + +T+ VIE + RH + + +
Sbjct: 24 PSSSLSIPALSLRI-----LTPTAATTSSAVIELPANVAEAPRSKRHSNSYLARKSAISE 78
Query: 113 ATSLKNFPSSPEPYIEML---DLAGKLRHFDLA--WH----LIDSMKTRGVEITAETFSV 163
+F SS + +L DL LR F ++ W L + M+ G +I+ T+S
Sbjct: 79 VQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSS 137
Query: 164 LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DR 222
I+ +V A ++A+ + + D + + ++S L + + + FD +K D
Sbjct: 138 CIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDG 196
Query: 223 FEPDVILYTSLIHGWCRA------------------------------------GKIERA 246
+PDV+ Y +L+ G + G+ E A
Sbjct: 197 LKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEA 256
Query: 247 EEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRV 306
E + MK G PN++ YS +++S G +A ++ EM G PN V +L++V
Sbjct: 257 ENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKV 316
Query: 307 HVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPN 366
++K G ++ ++ ++++ A + + Y L++ + LEEA + + M KGV +
Sbjct: 317 YIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSD 376
Query: 367 SSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKK 426
+ + + + A + + + + N ++ + + ++ V+++ K
Sbjct: 377 GYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMK 436
Query: 427 EMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
+MDE V P+ NT+ ILI F ++ AY+ +M
Sbjct: 437 KMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDM 473
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 105/231 (45%), Gaps = 6/231 (2%)
Query: 277 QITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYN 336
++ R+ D + + N ++R +GR + ++Q+F M++ + + Y+
Sbjct: 78 EVQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHGKISVST-YS 136
Query: 337 FLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKEL 396
I+ +N+ +A+++ + + N NSI C+ K ++ +++ +MK
Sbjct: 137 SCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRD 195
Query: 397 NCLPNTLTYNILMRMFAESKS-IDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNN 455
P+ +TYN L+ + K+ ++L E+ N ++ + Y ++ + G
Sbjct: 196 GLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEE 255
Query: 456 AYKLMKEM-VEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
A +++M VE S PN+ Y ++L G K +EL+ +M + G V
Sbjct: 256 AENFIQQMKVEGHS--PNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLV 304
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 157/346 (45%), Gaps = 10/346 (2%)
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG---VAPDKVAVSIVVSSLCR 205
MK G+ T T++ LI+ Y AG + + M + G V P+ +++V + C+
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 206 KRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAE-EIFKDM-KDAGIKPNV 262
K++ EEA +++ PD + Y ++ + + G+ RAE E+ + M KPN
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 263 HTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQ 322
T IV+ CR G++ M + N V FNSL+ V+ + + +V
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTL 320
Query: 323 MKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHD 382
MK N AD I Y+ ++ +E+A +V MVK GV P++ ++ + + +
Sbjct: 321 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 380
Query: 383 VNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRI 442
A + + + PN + + ++ + + S+D +++ +M + V PN+ T+
Sbjct: 381 PKKAEELLETLI-VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFET 439
Query: 443 LILMFCE-KGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
L+ + E K W L +M+ +KP + + E R AG
Sbjct: 440 LMWGYLEVKQPWKAEEVL--QMMRGCGVKPENSTFLLLAEAWRVAG 483
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 138/283 (48%), Gaps = 16/283 (5%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGV----- 189
K + + AW ++ M+ GV T++ + YV+ G E V A + + + V
Sbjct: 200 KKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG---ETVRAESEVVEKMVMKEKA 256
Query: 190 APDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEE 248
P+ IVV CR+ R + F +K+ R E +++++ SLI+G+ + +E
Sbjct: 257 KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDE 316
Query: 249 IFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHV 308
+ MK+ +K +V TYS V+++ G + +A VF EM+ AG P+A ++ L + +V
Sbjct: 317 VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYV 376
Query: 309 KA---GRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
+A + E++L+ R N + + +I C + ++++A++V N M K GV+P
Sbjct: 377 RAKEPKKAEELLETLIVESRPN----VVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSP 432
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNIL 408
N TF ++ ++ A + M+ P T+ +L
Sbjct: 433 NIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLL 475
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 155/350 (44%), Gaps = 51/350 (14%)
Query: 203 LCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPN 261
L + R EAQ+ F ++ + P +I YT+L+ + I +++ +G K +
Sbjct: 55 LIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLD 114
Query: 262 VHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFN 321
++ VI++ G + A +M + G NP T+N+L++ + AG+ E+ ++ +
Sbjct: 115 SIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 322 QM---KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
M + + +N L++ C+ + +EEA +V+ M + GV P++ T+N+I C
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYV 234
Query: 379 KLHD-------------------------------------VNGAHRMYAKMKELNCLPN 401
+ + V R +MKE+ N
Sbjct: 235 QKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEAN 294
Query: 402 TLTYNILMRMFAE---SKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYK 458
+ +N L+ F E ID VL L KE + V+ +V TY ++ + G+ A +
Sbjct: 295 LVVFNSLINGFVEVMDRDGIDEVLTLMKECN---VKADVITYSTVMNAWSSAGYMEKAAQ 351
Query: 459 LMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVSRP 508
+ KEMV + +KP+ Y + + +A + K EEL+E ++ SRP
Sbjct: 352 VFKEMV-KAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE---SRP 397
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 7/230 (3%)
Query: 95 GAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGV 154
G +R G+ F + + +L F S ++E++D G D ++ MK V
Sbjct: 274 GRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDG----ID---EVLTLMKECNV 326
Query: 155 EITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQS 214
+ T+S ++ + AG +A F M GV PD A SI+ R + ++A+
Sbjct: 327 KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEE 386
Query: 215 FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
+++ P+V+++T++I GWC G ++ A +F M G+ PN+ T+ ++
Sbjct: 387 LLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLE 446
Query: 275 CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMK 324
Q +A +V M G P TF L AG T++ + N +K
Sbjct: 447 VKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 496
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 130/262 (49%), Gaps = 20/262 (7%)
Query: 231 TSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMID 290
T L++ G+ A+ +FK + + G +P++ +Y+ ++ ++ Q + +E+
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 291 AGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEE 350
+G +++ FN+++ ++G E +Q +MK T YN LI+ + E
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 351 AVKVLNLMVKKG---VAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNI 407
+ ++L+LM+++G V PN TFN + K V A + KM+E P+T+TYN
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 408 LMRMF--------AESKSID-MVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYK 458
+ + AES+ ++ MV+K K +PN T I++ +C +G + +
Sbjct: 229 IATCYVQKGETVRAESEVVEKMVMKEK-------AKPNGRTCGIVVGGYCREGRVRDGLR 281
Query: 459 LMKEMVEEKSLKPNLQVYENVL 480
++ M +E ++ NL V+ +++
Sbjct: 282 FVRRM-KEMRVEANLVVFNSLI 302
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 110/216 (50%), Gaps = 4/216 (1%)
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
V + + +++ L G+ A VF + + G P+ +++ +L+ + + +
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI---FGCI 377
+++++ D+I +N +I N+E+AV+ L M + G+ P +ST+N++ +G
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 378 AKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNV 437
K + + + ++ PN T+N+L++ + + K ++ ++ K+M+E V P+
Sbjct: 164 GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 438 NTYRILILMFCEKGHWNNA-YKLMKEMVEEKSLKPN 472
TY + + +KG A +++++MV ++ KPN
Sbjct: 224 VTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPN 259
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 174/372 (46%), Gaps = 16/372 (4%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV 194
KL + D A L+D M+ G++ T++ L+ Y GL+ +A+ RM+ G+ P
Sbjct: 167 KLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTS 226
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
++S ++ ++ + ++ + +++ DV + T+LI + + G + A +F DM
Sbjct: 227 SISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF-DM 285
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRT 313
DA N+ ++ ++ L + A + M G P+A+T+NSL + G+
Sbjct: 286 MDA---KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKP 342
Query: 314 EKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNS- 372
EK L V +MK A + + + + ++ N A+KV M ++GV PN++T ++
Sbjct: 343 EKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTL 402
Query: 373 --IFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE 430
I GC++ LH H + K L C + L+ M+ +S + +++ + +
Sbjct: 403 LKILGCLSLLHSGKEVHG-FCLRKNLIC--DAYVATALVDMYGKSGDLQSAIEIFWGI-K 458
Query: 431 NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK 490
N+ + N + MF A+ +M E ++P+ + +VL + + +G ++
Sbjct: 459 NKSLASWNCMLMGYAMFGRGEEGIAAFSVML----EAGMEPDAITFTSVLSVCKNSGLVQ 514
Query: 491 MHEELVEKMVAR 502
+ + M +R
Sbjct: 515 EGWKYFDLMRSR 526
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 145/336 (43%), Gaps = 20/336 (5%)
Query: 162 SVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-K 220
+ LI Y++ G A F+ M+ A + VA + +VS L ++A++ + K
Sbjct: 264 TTLIDMYIKTGYLPYARMVFDMMD----AKNIVAWNSLVSGLSYACLLKDAEALMIRMEK 319
Query: 221 DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITR 280
+ +PD I + SL G+ GK E+A ++ MK+ G+ PNV +++ + + G
Sbjct: 320 EGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRN 379
Query: 281 AHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIE 340
A VF +M + G PNA T ++L+++ +V R N D L++
Sbjct: 380 ALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVD 439
Query: 341 CHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLP 400
+ + +L+ A+++ + K +A ++N + A ++ M E P
Sbjct: 440 MYGKSGDLQSAIEIFWGIKNKSLA----SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEP 495
Query: 401 NTLTYNILMRMFAESKSIDMVLKLKKEM-DENQVEPNVNTYRILILMFCEKGHWNNAYKL 459
+ +T+ ++ + S + K M + P + ++ + G+ + A+
Sbjct: 496 DAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDF 555
Query: 460 MKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEEL 495
++ M SLKP+ ++ L K+H +L
Sbjct: 556 IQTM----SLKPDATIWGAFLS------SCKIHRDL 581
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 149/347 (42%), Gaps = 37/347 (10%)
Query: 169 VRAGLAAEAVHAFNRMEDYGV-APDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDV 227
+R+G +AV F M+ G A D V ++ ++ AE Q ++ E +V
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 228 ILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAE 287
+ SLI + R GK+E + ++F MKD N+ +++ ++ S + G + A + E
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKD----RNLSSWNSILSSYTKLGYVDDAIGLLDE 180
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDEN 347
M G P+ VT+NSL+ + G ++ + V +M+ T + L++ +
Sbjct: 181 MEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGH 240
Query: 348 LEEA-------------------VKVLNLMVKKGVAP------------NSSTFNSIFGC 376
L+ ++++ +K G P N +NS+
Sbjct: 241 LKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSG 300
Query: 377 IAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPN 436
++ + A + +M++ P+ +T+N L +A + L + +M E V PN
Sbjct: 301 LSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPN 360
Query: 437 VNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELL 483
V ++ + + G++ NA K+ +M EE + PN +L++L
Sbjct: 361 VVSWTAIFSGCSKNGNFRNALKVFIKMQEE-GVGPNAATMSTLLKIL 406
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 134/293 (45%), Gaps = 12/293 (4%)
Query: 212 AQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDS 271
A FD + R D + + ++ R+G E+A E+F++M+ +G K T ++
Sbjct: 42 ANKLFDEMPKR---DDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQV 98
Query: 272 LCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
+ ++ G N NSL+ ++ + G+ E +VFN MK N ++
Sbjct: 99 CSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSS- 157
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA 391
+N ++ + + +++A+ +L+ M G+ P+ T+NS+ A A +
Sbjct: 158 ---WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLK 214
Query: 392 KMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
+M+ P+T + + L++ AE + + + + NQ+ +V LI M+ + G
Sbjct: 215 RMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTG 274
Query: 452 HWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+ A +++ +M++ K N+ + +++ L A LK E L+ +M G
Sbjct: 275 YLPYA-RMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGI 322
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 203/447 (45%), Gaps = 34/447 (7%)
Query: 82 ISPSTARRVIEKC--GAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRH- 138
+SP +V+E G R G+ + FFNWA+ + + + Y M + + R
Sbjct: 67 LSPELNTKVVETVLNGFKRWGLAYL----FFNWASKQEGYRNDMYAYNAMASILSRARQN 122
Query: 139 FDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVA-PDKVAVS 197
L ++D + +R ++ F IR AGL EA F+R+ + G+ P+ +
Sbjct: 123 ASLKALVVDVLNSRCF-MSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYN 181
Query: 198 IVVSSLCRKRRA--EEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMK 254
++ ++ + + E ++ ++D F D T ++ +C GK ERA +F ++
Sbjct: 182 CLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEIL 241
Query: 255 DAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTE 314
G + H +I++ S C+ GQ+ +A ++ + + N T+ L+ VK R +
Sbjct: 242 SRGW-LDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRID 300
Query: 315 KVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIF 374
K Q+F +M+R AD Y+ LI C+ ++LE A+ + + + G+ P+ +
Sbjct: 301 KAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLL 360
Query: 375 GCIAK-----------LHDVNGAHRM--YAKMKELNCLPNTLT---YNILMRMFA--ESK 416
++ + D++ M Y + E + N L Y+ + + ES
Sbjct: 361 CSFSEESELSRITEVIIGDIDKKSVMLLYKSLFE-GFIRNDLVHEAYSFIQNLMGNYESD 419
Query: 417 SIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVY 476
+ ++KL K+ ++ + P+ ++ I+I + + A L+ ++V + L P +Y
Sbjct: 420 GVSEIVKLLKDHNK-AILPDSDSLSIVINCLVKANKVDMAVTLLHDIV-QNGLIPGPMMY 477
Query: 477 ENVLELLRKAGQLKMHEELVEKMVARG 503
N++E + K G+ + +L+ +M G
Sbjct: 478 NNIIEGMCKEGRSEESLKLLGEMKDAG 504
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 127/279 (45%), Gaps = 1/279 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+ M+ G E + + L+++ G A +A + + G VA + +
Sbjct: 528 ALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAID 587
Query: 202 SLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
L + + F D + PDVI Y LI C+A + A+ +F +M G+KP
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
V TY+ +ID C+ G+I R M + NP+ +T+ SL+ +GR + + +
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW 707
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
N+MK +C + I + LI+ C+ EA+ M +K + P+S+ + S+
Sbjct: 708 NEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSS 767
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSID 419
++N ++ +M P ++ N ++ + SK ++
Sbjct: 768 ENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSKFVE 806
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 1/285 (0%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
L+ MK GVE + T + + A+ +M YG P + +V LC
Sbjct: 496 LLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLC 555
Query: 205 RKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVH 263
RA +A + D V + F ++ T+ I G + ++R E+F+D+ G P+V
Sbjct: 556 ENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVI 615
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM 323
Y ++I +LC+ + A +F EM+ G P T+NS++ K G ++ L +M
Sbjct: 616 AYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRM 675
Query: 324 KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDV 383
D I Y LI C EA+ N M K PN TF ++ + K
Sbjct: 676 YEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWS 735
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEM 428
A + +M+E P++ Y L+ F S++I+ + +EM
Sbjct: 736 GEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREM 780
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 136/324 (41%), Gaps = 37/324 (11%)
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAGKIERAE 247
+ PD ++SIV++ L + + + A + D V++ P ++Y ++I G C+ G+ E +
Sbjct: 435 ILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESL 494
Query: 248 EIFKDMKDAGIKPNVHTYSIV-----------------------------------IDSL 272
++ +MKDAG++P+ T + + + L
Sbjct: 495 KLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKL 554
Query: 273 CRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADT 332
C G+ A ++ G + V + + +K ++ L++F + D
Sbjct: 555 CENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDV 614
Query: 333 IGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAK 392
I Y+ LI+ C+ EA + N MV KG+ P +T+NS+ K +++ +
Sbjct: 615 IAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVR 674
Query: 393 MKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGH 452
M E P+ +TY L+ S + EM PN T+ LI C+ G
Sbjct: 675 MYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGW 734
Query: 453 WNNAYKLMKEMVEEKSLKPNLQVY 476
A +EM EEK ++P+ VY
Sbjct: 735 SGEALVYFREM-EEKEMEPDSAVY 757
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 155/379 (40%), Gaps = 59/379 (15%)
Query: 146 IDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCR 205
+ M+ G T + +++ Y G + A+ FN + G + ++ +I+V S C+
Sbjct: 202 LKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCK 260
Query: 206 KRRAEEAQSFFDSVKDRFEPDVIL----YTSLIHGWCRAGKIERAEEIFKDMKDAGIKPN 261
+ ++A + +++R D+ L Y LIHG+ + +I++A ++F+ M+ G+ +
Sbjct: 261 WGQVDKAFELIEMLEER---DIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNAD 317
Query: 262 VHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM----------RV-HVKA 310
+ Y ++I LC+ + A ++ E+ +G P+ L+ R+ V
Sbjct: 318 IALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVII 377
Query: 311 GRTEK--------------------------------------VLQVFNQMKRFNCAA-- 330
G +K V ++ +K N A
Sbjct: 378 GDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILP 437
Query: 331 DTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMY 390
D+ + +I C + ++ AV +L+ +V+ G+ P +N+I + K + ++
Sbjct: 438 DSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLL 497
Query: 391 AKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEK 450
+MK+ P+ T N + AE L L K+M EP + L+ CE
Sbjct: 498 GEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCEN 557
Query: 451 GHWNNAYKLMKEMVEEKSL 469
G +A K + ++ E L
Sbjct: 558 GRAVDACKYLDDVAGEGFL 576
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 9/212 (4%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQS-FFDS 218
+ VLI+ +A EA FN M G+ P + ++ C++ + S
Sbjct: 616 AYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRM 675
Query: 219 VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
+D PDVI YTSLIHG C +G+ A + +MK PN T+ +I LC+CG
Sbjct: 676 YEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWS 735
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM---KRFNCAADTIGY 335
A F EM + P++ + SL+ + + +F +M RF + D
Sbjct: 736 GEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDR--- 792
Query: 336 NFLIECHCRDENLEE--AVKVLNLMVKKGVAP 365
N+++ + + +E+ L ++K G P
Sbjct: 793 NYMLAVNVTSKFVEDLRTSCYLTCLIKDGRIP 824
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 145/319 (45%), Gaps = 7/319 (2%)
Query: 125 PYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRM 184
Y ++D G+ D A L D M ++G+ + ++ ++ G A+ M
Sbjct: 328 TYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDM 387
Query: 185 EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKI 243
+ D+ +IVV LCR +EA F + + + D++ + +L+H + R K+
Sbjct: 388 NSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKL 447
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
A++I M G+ + ++ +ID + G++ RA +++ MI N V +NS+
Sbjct: 448 ACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSI 507
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
+ K G V N M+ D + YN L+ + N+EEA +L+ M K+
Sbjct: 508 VNGLSKRGMAGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDG 563
Query: 364 APNSS--TFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMV 421
+ S TFN + + K A + M E +P+++TY L+ F++ +S + V
Sbjct: 564 EKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKV 623
Query: 422 LKLKKEMDENQVEPNVNTY 440
++L + V P+ + Y
Sbjct: 624 VELHDYLILQGVTPHEHIY 642
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 177/411 (43%), Gaps = 46/411 (11%)
Query: 136 LRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVA 195
+ D W + M + G TF+++I + + EA+ F RM GV P+ V+
Sbjct: 196 VNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVS 255
Query: 196 VSIVVSSLCRK---RRAEEAQSFFDSVKDRF-EPDVILYTSLIHGWCRAGKIERAEEIFK 251
++++ C+ R A + + F P+ + Y S+I+G+C+AG+++ AE I
Sbjct: 256 FNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRG 315
Query: 252 DMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAG 311
DM +G+ N TY ++D+ R G A + EM G N V +NS++ G
Sbjct: 316 DMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEG 375
Query: 312 RTEKVLQVFN-------QMKRFNCA----------------------------ADTIGYN 336
E + V Q+ RF A D + +N
Sbjct: 376 DIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHN 435
Query: 337 FLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKEL 396
L+ RD+ L A ++L M+ +G++ ++ +F ++ K + A +Y M ++
Sbjct: 436 TLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKM 495
Query: 397 NCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVE-PNVNTYRILILMFCEKGHWNN 455
N N + YN ++ ++ + E N +E ++ TY L+ + G+
Sbjct: 496 NKTSNLVIYNSIVNGLSKRG-----MAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEE 550
Query: 456 AYKLMKEMVEEKSLKP-NLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
A ++ +M ++ K +L + ++ L K G + +E+++ MV RG V
Sbjct: 551 ADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVV 601
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 172/383 (44%), Gaps = 15/383 (3%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRG---VEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
M+D A K A L+ M V A T++ +I + +AG A M
Sbjct: 259 MIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMV 318
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIE 244
GV ++ +V + R ++EA D + + + ++Y S+++ G IE
Sbjct: 319 KSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIE 378
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A + +DM ++ + T +IV+ LCR G + A + ++ + + V N+LM
Sbjct: 379 GAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLM 438
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
V+ + Q+ M + D I + LI+ + ++ LE A+++ + M+K
Sbjct: 439 HHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKT 498
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSI----DM 420
N +NSI ++K A + M+ + + +TYN L+ ++ ++ D+
Sbjct: 499 SNLVIYNSIVNGLSKRGMAGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDI 554
Query: 421 VLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVL 480
+ K++K+ E V ++ T+ I+I C+ G + A +++K MV E+ + P+ Y ++
Sbjct: 555 LSKMQKQDGEKSV--SLVTFNIMINHLCKFGSYEKAKEVLKFMV-ERGVVPDSITYGTLI 611
Query: 481 ELLRKAGQLKMHEELVEKMVARG 503
K + EL + ++ +G
Sbjct: 612 TSFSKHRSQEKVVELHDYLILQG 634
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 5/242 (2%)
Query: 225 PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDV 284
PDV + SL+ + G + A E+ + + G +VH + + L +I R V
Sbjct: 148 PDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKV 205
Query: 285 FAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
+ EM G N TFN ++ K + + L VF +M + + + +N +I+ C+
Sbjct: 206 YKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACK 265
Query: 345 DENLEEAVKVL---NLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPN 401
++ A+++L +M V+PN+ T+NS+ K ++ A R+ M + N
Sbjct: 266 TGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCN 325
Query: 402 TLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMK 461
TY L+ + + S D L+L EM + N Y ++ +G A +++
Sbjct: 326 ERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLR 385
Query: 462 EM 463
+M
Sbjct: 386 DM 387
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 4/216 (1%)
Query: 293 CNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAV 352
C + F+SL+R + G + +V Q + N + C ++
Sbjct: 144 CGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFW 203
Query: 353 KVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMF 412
KV M G N +TFN + K + A ++ +M + PN +++N+++
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 413 AESKSIDMVLKLKKE---MDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSL 469
++ + L+L + M N V PN TY +I FC+ G + A ++ +MV + +
Sbjct: 264 CKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMV-KSGV 322
Query: 470 KPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
N + Y +++ +AG L ++M ++G V
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLV 358
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 164/362 (45%), Gaps = 3/362 (0%)
Query: 106 SLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLI 165
+L FN + + Y ++ + G + D A L + M + G++ T + ++ LI
Sbjct: 127 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLI 186
Query: 166 RRYVRAGLAAEAVHAFNRMEDYG-VAPDKVAVSIVVSSLCRKRRAEEAQSF-FDSVKDRF 223
Y ++ L +A M+ PD ++++S C+ R + +S +
Sbjct: 187 SVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGV 246
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDM-KDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
+ Y ++I G+ +AG E E + DM +D P+V T + +I S + +
Sbjct: 247 GCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKME 306
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
++ G P+ TFN L+ KAG +K+ V + M++ + T+ YN +IE
Sbjct: 307 SWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETF 366
Query: 343 CRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
+ +E+ V M +GV PNS T+ S+ +K V + ++ + + +T
Sbjct: 367 GKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDT 426
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
+N ++ + ++ + + +L +M+E + +P+ T+ +I + G ++ +L K+
Sbjct: 427 PFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQ 486
Query: 463 MV 464
M+
Sbjct: 487 MI 488
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/468 (20%), Positives = 192/468 (41%), Gaps = 18/468 (3%)
Query: 42 HTAIKDHHRKNPNPDAAPPSPTLTIPDLALE---FSRLSAAHPISPSTARRVIEKCGAIR 98
H + + R P P + +P+ E +S H + P I + A
Sbjct: 32 HISSPVYFRCIPTISITPTMCSTKVPNERTEKMNSGLISTRHQVDPKKELSRILRTDAAV 91
Query: 99 HGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSM-KTRGVEIT 157
GI A S K P+ +E LD A K + A + + + K E
Sbjct: 92 KGIE--------RKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPR 143
Query: 158 AETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQS--- 214
+T++ L + +A F M G+ P + ++S + ++A S
Sbjct: 144 CKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLE 203
Query: 215 FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
+ SV D +PDV +T LI C+ G+ + + I +M G+ + TY+ +ID +
Sbjct: 204 YMKSVSD-CKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGK 262
Query: 275 CGQITRAHDVFAEMIDAGCN-PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTI 333
G V A+MI+ G + P+ T NS++ + K+ +++ + D
Sbjct: 263 AGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDIT 322
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM 393
+N LI + ++ V++ M K+ + + T+N + K + ++ KM
Sbjct: 323 TFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKM 382
Query: 394 KELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHW 453
K PN++TY L+ ++++ + + + +++ + V + + +I + + G
Sbjct: 383 KYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDL 442
Query: 454 NNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVA 501
+L +M EE+ KP+ + +++ G +EL ++M++
Sbjct: 443 ATMKELYIQM-EERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMIS 489
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 3/247 (1%)
Query: 259 KPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ 318
+P TY+ + L C Q +A +F M+ G P + SL+ V+ K+ +K
Sbjct: 141 EPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFS 200
Query: 319 VFNQMKRF-NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCI 377
MK +C D + LI C C+ + ++ M GV ++ T+N+I
Sbjct: 201 TLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGY 260
Query: 378 AKLHDVNGAHRMYAKMKE-LNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPN 436
K + A M E + LP+ T N ++ + +++ + V+P+
Sbjct: 261 GKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPD 320
Query: 437 VNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELV 496
+ T+ ILIL F + G + +M + +E++ Y V+E KAG+++ +++
Sbjct: 321 ITTFNILILSFGKAGMYKKMCSVM-DFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVF 379
Query: 497 EKMVARG 503
KM +G
Sbjct: 380 RKMKYQG 386
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 151/349 (43%), Gaps = 41/349 (11%)
Query: 128 EMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDY 187
E++ L GKL A+ + + G A+T+ + + + A +M
Sbjct: 236 ELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKS 295
Query: 188 GVAPDKVAVSIVVSSLCRKRRAEEAQSFFD--SVKDRFEPDVILYTSLIHGWCR-AGKIE 244
GV + + +++ C++ +AEEA S ++ K++ P + T LI C+ G I
Sbjct: 296 GVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVAT-LITALCKNDGTIT 354
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
A+E+ D+ + + +S VI SLCR + A + +MI G P FN ++
Sbjct: 355 FAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVV 414
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
K G +L+EA +VL LM +G+
Sbjct: 415 HACSKTG-----------------------------------DLDEAKEVLKLMESRGLK 439
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
P+ T+ I AK ++ A + A+ K+ + + +TY+ L+R + + + D LKL
Sbjct: 440 PDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKL 499
Query: 425 KKEMDENQVEPNVNTYRILILMFCEKG-HWNNAYKLMKEMVEEKSLKPN 472
EMD V+PN + Y LI FC K W A L +EM ++K L N
Sbjct: 500 LNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEM-KQKGLHLN 547
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 141/312 (45%), Gaps = 11/312 (3%)
Query: 105 QSLAFFNWATSLKNFPSSP--EPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFS 162
+S A F+ + + F +P + Y L+ K D A + + M GV E
Sbjct: 246 KSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMG 305
Query: 163 VLIRRYVRAGLAAEA--VHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEE-AQSFFDSV 219
+I + + G A EA V+ + ++ + P VA ++++LC+ AQ +
Sbjct: 306 NIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVAT--LITALCKNDGTITFAQEMLGDL 363
Query: 220 KDRFEPDVIL-YTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
I ++ +IH CR ++ A+ + DM G P +++V+ + + G +
Sbjct: 364 SGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDL 423
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
A +V M G P+ T+ ++ + K G ++ ++ + K+ + + Y+ L
Sbjct: 424 DEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHAL 483
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFG--CIAKLHDVNGAHRMYAKMKEL 396
I +C+ E +EA+K+LN M + GV PN+ +N + C+ L D A ++ +MK+
Sbjct: 484 IRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKAL-DWEKAEVLFEEMKQK 542
Query: 397 NCLPNTLTYNIL 408
N ++ ++
Sbjct: 543 GLHLNAISQGLI 554
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 133/320 (41%), Gaps = 56/320 (17%)
Query: 178 VHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEP------DVILYT 231
+ + M+ V D + +I++ + C R + AQ + K R E D Y
Sbjct: 320 LKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAK-RMESSGLLKLDAFTYC 378
Query: 232 SLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDA 291
++I + A + A ++ DMK G+ PN HT+S +I + G + +A+ +F EM+ +
Sbjct: 379 TIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLAS 438
Query: 292 GCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMK--------------------------- 324
GC PN+ FN L+ V+A + ++ ++F K
Sbjct: 439 GCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKN 498
Query: 325 --------------------RFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
RF T YN L++ D ++++ M G++
Sbjct: 499 NGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTD--YYRGKELMDEMKSLGLS 556
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
PN T++++ DV GA R+ M P+ + Y +++ AE+K + + L
Sbjct: 557 PNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSL 616
Query: 425 KKEMDENQVEPNVNTYRILI 444
+EM Q++PN TY L+
Sbjct: 617 FEEMRRYQIKPNWVTYNTLL 636
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 107/239 (44%), Gaps = 8/239 (3%)
Query: 228 ILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAE 287
+L +IHG+ + G + ++ K PN++ +ID CG ++ ++ +
Sbjct: 233 LLLCRIIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYED 292
Query: 288 MIDAGCNPNAVTFNSLMRVHV-KAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC--- 343
++ PN NSLM V+ G T L+V+ M+ + AD YN L++ C
Sbjct: 293 LLKENIKPNIYVINSLMNVNSHDLGYT---LKVYKNMQILDVTADMTSYNILLKTCCLAG 349
Query: 344 RDENLEEAVKVLNLMVKKGVAP-NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
R + ++ K M G+ ++ T+ +I A A ++ MK + PNT
Sbjct: 350 RVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNT 409
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMK 461
T++ L+ A + ++ L +EM + EPN + IL+ E ++ A++L +
Sbjct: 410 HTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQ 468
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 149/338 (44%), Gaps = 25/338 (7%)
Query: 132 LAGKLRHFDLAWHLIDSMKTRGV-EITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVA 190
LAG++ + M++ G+ ++ A T+ +I+ + A + A+ + M+ GV
Sbjct: 347 LAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVT 406
Query: 191 PDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGKIERAEEI 249
P+ S ++S+ E+A F+ + EP+ + L+H A + +RA +
Sbjct: 407 PNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRL 466
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCN-------------PN 296
F+ K + + +++ IV I + ++ +++ N P
Sbjct: 467 FQSWKGSSVNESLYADDIVSKGRTSSPNILK-NNGPGSLVNRNSNSPYIQASKRFCFKPT 525
Query: 297 AVTFNSLMRVHVKAGRTE--KVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKV 354
T+N L+ KA T+ + ++ ++MK + + I ++ LI+ ++E AV++
Sbjct: 526 TATYNILL----KACGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRI 581
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
L M G P+ + + A+ + A ++ +M+ PN +TYN L++ ++
Sbjct: 582 LRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSK 641
Query: 415 SKS---IDMVLKLKKEMDENQVEPNVNTYRILILMFCE 449
S + L + ++M +PN + + LI +CE
Sbjct: 642 YGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCE 679
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 7/150 (4%)
Query: 358 MVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKS 417
++K+ + PN NS+ HD+ ++Y M+ L+ + +YNIL++ +
Sbjct: 293 LLKENIKPNIYVINSLMN--VNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGR 350
Query: 418 IDMVLKLKKEMDENQ----VEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNL 473
+D+ + KE + ++ + TY +I +F + W A K+ +M + + PN
Sbjct: 351 VDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDM-KSVGVTPNT 409
Query: 474 QVYENVLELLRKAGQLKMHEELVEKMVARG 503
+ +++ AG ++ L E+M+A G
Sbjct: 410 HTWSSLISACANAGLVEQANHLFEEMLASG 439
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 141/295 (47%), Gaps = 8/295 (2%)
Query: 118 NFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEA 177
+F + +ML + G R+ DL W L + RG+ + +TF ++++ A +
Sbjct: 107 DFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGL-VNDKTFRIVLKTLASARELKKC 165
Query: 178 VHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGW 237
V+ F+ M +G + ++ V +LC+++ EEA+ F +K+ +PD I Y ++I G+
Sbjct: 166 VNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGF 225
Query: 238 CRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDA-GCNPN 296
C G + A +++ M D G ++ ++++L + Q A VF M+ G + +
Sbjct: 226 CDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLD 285
Query: 297 AVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLN 356
+ ++ K GR + +VF++M+ D + + LI + EA ++
Sbjct: 286 GGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLV- 344
Query: 357 LMVKKGVA-PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMR 410
+GV P+ S ++ + + K+ + A ++ KM + C P TY +L++
Sbjct: 345 ----EGVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQ 395
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 9/245 (3%)
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
N T+ IV+ +L ++ + + F M G N T N + K E+ VF
Sbjct: 145 NDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVF 204
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
++K F D I Y +I+ C +L EA K+ NLM+ +G + I + K
Sbjct: 205 IKLKEF-IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKK 263
Query: 381 HDVNGAHRMYAKM--KELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVN 438
+ + A +++ M K L Y +++ ++ IDM K+ EM E V +
Sbjct: 264 NQFDEASKVFYVMVSKRGGDLDGGF-YRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNL 322
Query: 439 TYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEK 498
T+ LI K AY L+ E VE P++ +Y +++ L K + E+ K
Sbjct: 323 TWASLIYGLLVKRRVVEAYGLV-EGVE----NPDISIYHGLIKGLVKIKRASEATEVFRK 377
Query: 499 MVARG 503
M+ RG
Sbjct: 378 MIQRG 382
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 111/224 (49%), Gaps = 4/224 (1%)
Query: 160 TFSVLIRRYVRAGLAA-EAVH-AFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFD 217
TF +L+ RA ++ VH N M + G+ PD+V I V SLC R +EA+
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 218 SVKDRFEP-DVILYTSLIHGWCRAGKIERAEEIFKDMKDA-GIKPNVHTYSIVIDSLCRC 275
+ ++ P D Y L+ C+ + E +M+D +KP++ +++I+ID++C
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 276 GQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGY 335
+ A + +++ +AG P+ +N++M+ + + + V+ +MK D I Y
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 336 NFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAK 379
N LI + +EEA L MV G P+++T+ S+ + +
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 3/232 (1%)
Query: 223 FEPDVILYTSLIHGWCRA--GKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITR 280
F P + L+ CRA I + M + G++P+ T I + SLC G++
Sbjct: 118 FRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 281 AHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR-FNCAADTIGYNFLI 339
A D+ E+ + P+ T+N L++ K V + ++M+ F+ D + + LI
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
+ C +NL EA+ +++ + G P+ +N+I L + A +Y KMKE
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 400 PNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
P+ +TYN L+ +++ ++ K M + EP+ TY L+ C KG
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 136/337 (40%), Gaps = 24/337 (7%)
Query: 24 KLYSSPASPQHDLIAEKFHTAIKDHHRKNPNPDAAPPSPTLTIP-------DLALEFSRL 76
K SP +P D + TA+ K P AP P+L P D F+ +
Sbjct: 19 KTTPSPPAPPRDF---RNRTAVGGDSAKLPQNTQAPREPSLRNPFKSPNLSDAKSLFNSI 75
Query: 77 SAAH--PISPSTARRVIEKCGAI---RHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLD 131
+A P+ V++ G+I + +Q + S NF ++ +L
Sbjct: 76 AATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHIL-----KSQPNFRPGRSTFLILLS 130
Query: 132 LAGKLRHFDLA--WHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGV 189
A + ++ +++ M G+E T + +R G EA + +
Sbjct: 131 HACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHS 190
Query: 190 APDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFE--PDVILYTSLIHGWCRAGKIERAE 247
PD + ++ LC+ + F D ++D F+ PD++ +T LI C + + A
Sbjct: 191 PPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM 250
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
+ + +AG KP+ Y+ ++ C + + A V+ +M + G P+ +T+N+L+
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
KAGR E+ M DT Y L+ CR
Sbjct: 311 SKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Query: 185 EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKI 243
+D+ V PD V+ +I++ ++C + EA + + F+PD LY +++ G+C K
Sbjct: 222 DDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKG 281
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
A ++K MK+ G++P+ TY+ +I L + G++ A M+DAG P+ T+ SL
Sbjct: 282 SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSL 341
Query: 304 MRVHVKAG 311
M + G
Sbjct: 342 MNGMCRKG 349
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 126/284 (44%), Gaps = 8/284 (2%)
Query: 211 EAQSFFDSV--KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM--KDAGIKPNVHTYS 266
+A+S F+S+ R D+ + S++ + + ++F+ + +P T+
Sbjct: 67 DAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFL 126
Query: 267 IVIDSLCRC--GQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMK 324
I++ CR I+ H V M++ G P+ VT + +R + GR ++ + ++
Sbjct: 127 ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 186
Query: 325 RFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKK-GVAPNSSTFNSIFGCIAKLHDV 383
+ DT YNFL++ C+ ++L + ++ M V P+ +F + + ++
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 384 NGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL 443
A + +K+ P+ YN +M+ F + + K+M E VEP+ TY L
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Query: 444 ILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
I + G A +K MV+ +P+ Y +++ + + G
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDA-GYEPDTATYTSLMNGMCRKG 349
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 4/174 (2%)
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKK--GVAPNSSTFNSIF--GCIAKLHDVNGAHRMY 390
+N +++ + + + VK+ ++K P STF + C A ++ HR+
Sbjct: 88 HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVL 147
Query: 391 AKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEK 450
M P+ +T +I +R E+ +D L KE+ E P+ TY L+ C+
Sbjct: 148 NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKC 207
Query: 451 GHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+ Y+ + EM ++ +KP+L + +++ + + L+ LV K+ GF
Sbjct: 208 KDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGF 261
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 156/326 (47%), Gaps = 2/326 (0%)
Query: 148 SMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKR 207
+++ R + ++ ++ ++ + + + + M + GV P++ ++VVSS ++
Sbjct: 248 AVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQG 307
Query: 208 RAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYS 266
EEA F +K F P+ + Y+S+I +AG E+A +++DM+ GI P+ +T +
Sbjct: 308 FKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCA 367
Query: 267 IVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF 326
++ + +A +FA+M + V ++R++ K G +F + +R
Sbjct: 368 TMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERL 427
Query: 327 NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGA 386
N AD Y + + H N+ +A+ V+ +M + + + + + C AK+ +V+ A
Sbjct: 428 NLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCA 487
Query: 387 HRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILM 446
+ + + LP+ + N ++ ++ + K++ +QV ++ Y+ + +
Sbjct: 488 EEAFRALSKTG-LPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRV 546
Query: 447 FCEKGHWNNAYKLMKEMVEEKSLKPN 472
+C++G A L+ +M E +K N
Sbjct: 547 YCKEGMVAEAQDLIVKMGREARVKDN 572
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 167/341 (48%), Gaps = 1/341 (0%)
Query: 164 LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRF 223
+I +VR G ++A + + G+ ++ ++ +++ R+ + +EA+ + + +
Sbjct: 641 VISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESK 700
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHD 283
P + S+I + R G +E A +F + + G P T SI++++L G+ A
Sbjct: 701 TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEH 760
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
+ ++ + V +N+L++ ++AG+ + +++ +M YN +I +
Sbjct: 761 ISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG 820
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
R L++A+++ + + G+ + + ++ K ++ A ++++M++ P T
Sbjct: 821 RGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTP 880
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
+YN+++++ A S+ V +L + M+ N +++TY LI ++ E + A K + +
Sbjct: 881 SYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTIT-L 939
Query: 464 VEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
V+EK + + + ++L L KAG ++ E KM G
Sbjct: 940 VKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGI 980
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 124/278 (44%), Gaps = 11/278 (3%)
Query: 194 VAVSIVVSSLCRKRRAEEAQSFFDS---VKDRFEPDVILYTSLIHGWCRAGKIERAEEIF 250
VA V L ++R+ + F S K F D+ + GW + + F
Sbjct: 123 VAAIKTVRGLSQRRQGSDDMRFVMSSFVAKLSFR-DMCVVLKEQRGW------RQVRDFF 175
Query: 251 KDMK-DAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVK 309
MK +P+V Y+IV+ + G+I A + F EM++ GC P+AV +++ + +
Sbjct: 176 SWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYAR 235
Query: 310 AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSST 369
GR +L + ++ T YNF++ + + + + MV++GV PN T
Sbjct: 236 WGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFT 295
Query: 370 FNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMD 429
+ + AK A + + +MK L +P +TY+ ++ + ++ + + L ++M
Sbjct: 296 YTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMR 355
Query: 430 ENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEK 467
+ P+ T ++ ++ + ++ A L +M K
Sbjct: 356 SQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNK 393
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 160/376 (42%), Gaps = 69/376 (18%)
Query: 80 HPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEML--DLAGKLR 137
HP+S ARR+I+K + Q + A + K +PE ++ L D G++
Sbjct: 63 HPLSDDDARRIIKKKAQYLSTLRRNQG----SQAMTPKWIKRTPEQMVQYLEDDRNGQM- 117
Query: 138 HFDLAWHLIDSMKT-RGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
H++ ++KT RG+ + + R+V + A K++
Sbjct: 118 ---YGKHVVAAIKTVRGLSQRRQGSDDM--RFVMSSFVA-----------------KLSF 155
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVKDR--FEPDVILYTSLIHGWCRAGKIERAEEIFKDMK 254
+ L +R + + FF +K + + P V++YT ++ + + GKI+ AEE F +M
Sbjct: 156 RDMCVVLKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEML 215
Query: 255 DAGIKPN-----------------------------------VHTYSIVIDSLCRCGQIT 279
+ G +P+ Y+ ++ SL +
Sbjct: 216 EVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHG 275
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
+ D++ EM++ G PN T+ ++ + K G E+ L+ F +MK + + Y+ +I
Sbjct: 276 KVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVI 335
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
+ + E+A+ + M +G+ P++ T ++ K + A ++A M E N +
Sbjct: 336 SLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADM-ERNKI 394
Query: 400 P-NTLTYNILMRMFAE 414
P + + +++R++ +
Sbjct: 395 PADEVIRGLIIRIYGK 410
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/405 (15%), Positives = 157/405 (38%), Gaps = 34/405 (8%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
++ + GKL F A + + + + +T+ + + ++ +G +A+ M+
Sbjct: 404 IIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRD 463
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEE 248
+ + A +++ + + + A+ F ++ PD +++ + R E+A+
Sbjct: 464 IPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKG 523
Query: 249 IFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMI-DAGCNPN----------- 296
K + + ++ Y + C+ G + A D+ +M +A N
Sbjct: 524 FIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMH 583
Query: 297 ------------------AVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
+ ++ + +K G + + N M + + + + N +
Sbjct: 584 IVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAV--NRV 641
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNC 398
I R+ ++ +A + +++++ G+ T ++ + H + A R+Y E
Sbjct: 642 ISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKT 701
Query: 399 LPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYK 458
P ++ + ++ L E E +P T IL+ +G A
Sbjct: 702 -PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEH 760
Query: 459 LMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
+ + + EK+++ + Y +++ + +AG+L+ E+ E+M G
Sbjct: 761 ISRTCL-EKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSG 804
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 151/363 (41%), Gaps = 38/363 (10%)
Query: 103 FYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFS 162
+ Q+L F+ + Y+++L L GK + A L D M G+E T E ++
Sbjct: 104 WLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYT 163
Query: 163 VLIRRYVRAGLAAEAVHAFNRMEDY-GVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD 221
L+ Y R+ L +A ++M+ + PD S ++ + + + S + + +
Sbjct: 164 ALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDE 223
Query: 222 RF-EPDVILYTSLIHGWCRAGKIERAEEIFKDM-KDAGIKPNVHTYSIVIDSLCRCGQIT 279
R P+ + ++ G+ R G+ ++ E++ DM KP+V T +I++ G+I
Sbjct: 224 RLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKID 283
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
+ + + G P TFN L+ + K +K+ V M++ T YN +I
Sbjct: 284 MMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNII 343
Query: 340 EC---------------HCRDENLEEAVKV--------------------LNLMVKKGVA 364
E R E ++ K + L K +
Sbjct: 344 EAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIP 403
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
N++ +N++ AK D+ R+Y +MKE C+ ++ T+ I++ + + D + L
Sbjct: 404 ENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYL 463
Query: 425 KKE 427
++E
Sbjct: 464 EQE 466
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
Query: 351 AVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKEL-NCLPNTLTYNILM 409
A K+ + M+++G+ P + ++ + + ++ A + KMK C P+ TY+ L+
Sbjct: 143 AQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLL 202
Query: 410 RMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSL 469
+ ++ D+V L KEMDE + PN T I++ + G ++ K++ +M+ +
Sbjct: 203 KACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTAC 262
Query: 470 KPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVSRP 508
KP++ +L + G++ M E EK R F P
Sbjct: 263 KPDVWTMNIILSVFGNMGKIDMMESWYEKF--RNFGIEP 299
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 149/307 (48%), Gaps = 14/307 (4%)
Query: 184 MEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV---KDRFEPDVILYTSLIHGWCRA 240
M+ G ++ S++VS R R+E A +D + K D + ++I +
Sbjct: 240 MKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMY--AMISACTKE 297
Query: 241 GKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTF 300
K + A +IF+ M G+KPN+ + +I+SL + G++ V++ + G P+ T+
Sbjct: 298 EKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTW 357
Query: 301 NSLMRVHVKAGRTEKVLQVFNQMKRFN-CAADTIGYNF-LIECHCRDENLEEAVKVLNLM 358
N+L+ KA R E VLQ+F+ ++ N C + YN ++ C + E+AVK+L M
Sbjct: 358 NALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQ-KLGYWEKAVKLLYEM 416
Query: 359 VKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSI 418
G+ ++S++N + K A +Y M + +C PNT TY L+R
Sbjct: 417 EGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLW 476
Query: 419 DMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYEN 478
D V + K +VEP+V+ Y I C + + A +L +M E L+P+ +
Sbjct: 477 DEVEDILK-----KVEPDVSLYNAAIHGMCLRREFKFAKELYVKM-REMGLEPDGKTRAM 530
Query: 479 VLELLRK 485
+L+ L+K
Sbjct: 531 MLQNLKK 537
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 42/257 (16%)
Query: 239 RAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAV 298
R K+ A E+F M+ G++PN H + + L R G I +A VF E + N
Sbjct: 119 RLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVF-EFMRKKENVTGH 177
Query: 299 TFNSLMRVHVKAGRTEKVLQVFNQM----KRFNCAADTIGYNFLIECHCRDENLEEAVKV 354
T++ +++ + E L++F ++ KR +C D + YN I
Sbjct: 178 TYSLMLKAVAEVKGCESALRMFRELEREPKRRSCF-DVVLYNTAI--------------- 221
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
S+ G ++++V R++ MK + +TY++L+ +F
Sbjct: 222 -----------------SLCG---RINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVR 261
Query: 415 SKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQ 474
++ L + EM N++ + +I ++ W+ A K+ + M++ K +KPNL
Sbjct: 262 CGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLK-KGMKPNLV 320
Query: 475 VYENVLELLRKAGQLKM 491
++ L KAG++ +
Sbjct: 321 ACNTLINSLGKAGKVGL 337
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 107/243 (44%), Gaps = 7/243 (2%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
M+ K +DLA + SM +G++ + LI +AG ++ ++ G
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR--FEPDVILYTSLIHGWCRAGKIERA 246
PD+ + ++++L + R E+ FD ++ + LY + + + G E+A
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKA 409
Query: 247 EEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRV 306
++ +M+ +G+ + +Y++VI + + + A V+ M C PN T+ SL+R
Sbjct: 410 VKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS 469
Query: 307 HVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPN 366
+ ++V + +++ D YN I C + A ++ M + G+ P+
Sbjct: 470 CIWGSLWDEVEDILKKVE-----PDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPD 524
Query: 367 SST 369
T
Sbjct: 525 GKT 527
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV 194
KL +++ A L+ M+ G+ ++ +++++I ++ + A+ + M P+
Sbjct: 402 KLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTF 461
Query: 195 A-VSIVVSSLCRKRRAEEAQSFFDSVKD---RFEPDVILYTSLIHGWCRAGKIERAEEIF 250
+S+V S + S +D V+D + EPDV LY + IHG C + + A+E++
Sbjct: 462 TYLSLVRSCI--------WGSLWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELY 513
Query: 251 KDMKDAGIKPNVHTYSIVIDSL 272
M++ G++P+ T ++++ +L
Sbjct: 514 VKMREMGLEPDGKTRAMMLQNL 535
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 158/371 (42%), Gaps = 35/371 (9%)
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG---VAPDKVAVSIVVSSLCR 205
MK G+ T T++ LI+ Y AG + + M + G V P+ +++V + C+
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 206 KRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAE-EIFKDM-KDAGIKPNV 262
K++ EEA +++ PD + Y ++ + + G+ RAE E+ + M KPN
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 263 HTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKA------------ 310
T IV+ CR G++ M + N V FNSL+ V+
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLT 320
Query: 311 -------------GRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNL 357
G + +QV MK N AD I Y+ ++ +E+A +V
Sbjct: 321 LLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKE 380
Query: 358 MVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKS 417
MVK GV P++ ++ + + + A + + + PN + + ++ + + S
Sbjct: 381 MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVISGWCSNGS 439
Query: 418 IDMVLKLKKEMDENQVEPNVNTYRILILMFCE-KGHWNNAYKLMKEMVEEKSLKPNLQVY 476
+D +++ +M + V PN+ T+ L+ + E K W L +M+ +KP +
Sbjct: 440 MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVL--QMMRGCGVKPENSTF 497
Query: 477 ENVLELLRKAG 487
+ E R AG
Sbjct: 498 LLLAEAWRVAG 508
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/417 (19%), Positives = 179/417 (42%), Gaps = 41/417 (9%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y +L + + ++ ++ G ++ + F+ +I + +G +AV A +M+
Sbjct: 83 YTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMK 142
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR----FEPDVILYTSLIHGWCRAG 241
+ G+ P + ++ + E + D + + P++ + L+ WC+
Sbjct: 143 ELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKK 202
Query: 242 KIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAE--MIDAGCNPNAVT 299
K+E A E+ K M++ G++P+ TY+ + + G+ RA E ++ PN T
Sbjct: 203 KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRT 262
Query: 300 FNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI----ECHCRD---------- 345
++ + + GR L+ +MK A+ + +N LI E RD
Sbjct: 263 CGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLL 322
Query: 346 -----------ENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMK 394
N + V+VL LM + V + T++++ + + A +++ +M
Sbjct: 323 LMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV 382
Query: 395 ELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQV---EPNVNTYRILILMFCEKG 451
+ P+ Y+IL + + +K K +E+ E + PNV + +I +C G
Sbjct: 383 KAGVKPDAHAYSILAKGYVRAKEP----KKAEELLETLIVESRPNVVIFTTVISGWCSNG 438
Query: 452 HWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVSRP 508
++A ++ +M + + PN++ +E ++ + Q EE+++ M RG +P
Sbjct: 439 SMDDAMRVFNKMC-KFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM--RGCGVKP 492
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 138/308 (44%), Gaps = 41/308 (13%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGV----- 189
K + + AW ++ M+ GV T++ + YV+ G E V A + + + V
Sbjct: 200 KKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG---ETVRAESEVVEKMVMKEKA 256
Query: 190 APDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRA-------- 240
P+ IVV CR+ R + F +K+ R E +++++ SLI+G+
Sbjct: 257 KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDE 316
Query: 241 -----------------GKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHD 283
G + ++ MK+ +K +V TYS V+++ G + +A
Sbjct: 317 VTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQ 376
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAG---RTEKVLQVFNQMKRFNCAADTIGYNFLIE 340
VF EM+ AG P+A ++ L + +V+A + E++L+ R N + + +I
Sbjct: 377 VFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPN----VVIFTTVIS 432
Query: 341 CHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLP 400
C + ++++A++V N M K GV+PN TF ++ ++ A + M+ P
Sbjct: 433 GWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKP 492
Query: 401 NTLTYNIL 408
T+ +L
Sbjct: 493 ENSTFLLL 500
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 18/248 (7%)
Query: 95 GAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAG--------KLRHFDLAWHLI 146
G +R G+ F + + +L F S ++E++D G L F+ L+
Sbjct: 274 GRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELV 333
Query: 147 DS----------MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
+ MK V+ T+S ++ + AG +A F M GV PD A
Sbjct: 334 GNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAY 393
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDA 256
SI+ R + ++A+ +++ P+V+++T++I GWC G ++ A +F M
Sbjct: 394 SILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKF 453
Query: 257 GIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKV 316
G+ PN+ T+ ++ Q +A +V M G P TF L AG T++
Sbjct: 454 GVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDES 513
Query: 317 LQVFNQMK 324
+ N +K
Sbjct: 514 NKAINALK 521
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 130/262 (49%), Gaps = 20/262 (7%)
Query: 231 TSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMID 290
T L++ G+ A+ +FK + + G +P++ +Y+ ++ ++ Q + +E+
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 291 AGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEE 350
+G +++ FN+++ ++G E +Q +MK T YN LI+ + E
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 351 AVKVLNLMVKKG---VAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNI 407
+ ++L+LM+++G V PN TFN + K V A + KM+E P+T+TYN
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 408 LMRMF--------AESKSID-MVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYK 458
+ + AES+ ++ MV+K K +PN T I++ +C +G + +
Sbjct: 229 IATCYVQKGETVRAESEVVEKMVMKEK-------AKPNGRTCGIVVGGYCREGRVRDGLR 281
Query: 459 LMKEMVEEKSLKPNLQVYENVL 480
++ M +E ++ NL V+ +++
Sbjct: 282 FVRRM-KEMRVEANLVVFNSLI 302
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 121/254 (47%), Gaps = 8/254 (3%)
Query: 203 LCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPN 261
L + R EAQ+ F ++ + P +I YT+L+ + I +++ +G K +
Sbjct: 55 LIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLD 114
Query: 262 VHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFN 321
++ VI++ G + A +M + G NP T+N+L++ + AG+ E+ ++ +
Sbjct: 115 SIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 322 QM---KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGC-I 377
M + + +N L++ C+ + +EEA +V+ M + GV P++ T+N+I C +
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYV 234
Query: 378 AKLHDVNGAHRMYAK--MKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEP 435
K V + K MKE PN T I++ + + L+ + M E +VE
Sbjct: 235 QKGETVRAESEVVEKMVMKE-KAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA 293
Query: 436 NVNTYRILILMFCE 449
N+ + LI F E
Sbjct: 294 NLVVFNSLINGFVE 307
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 110/216 (50%), Gaps = 4/216 (1%)
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
V + + +++ L G+ A VF + + G P+ +++ +L+ + + +
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI---FGCI 377
+++++ D+I +N +I N+E+AV+ L M + G+ P +ST+N++ +G
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 378 AKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNV 437
K + + + ++ PN T+N+L++ + + K ++ ++ K+M+E V P+
Sbjct: 164 GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 438 NTYRILILMFCEKGHWNNA-YKLMKEMVEEKSLKPN 472
TY + + +KG A +++++MV ++ KPN
Sbjct: 224 VTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPN 259
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 120/576 (20%), Positives = 217/576 (37%), Gaps = 134/576 (23%)
Query: 6 KSSVRLHRSLSPLSPTTFKLYSS------------PASPQHDLIAEKFHTAIKDHHRKNP 53
+SSV+L SL L PT K +S P+ D+++ ++ K
Sbjct: 18 RSSVKLLHSLPRLKPTNSKRFSQKPKLVKTQTLPDPSVYTRDIVSNIYNIL------KYS 71
Query: 54 NPDAAPPSPTLTIPDLALEF-----SRLSAAHPISPSTARRVIEKCGAIRHGIPFYQSLA 108
N D+A +P L + + +R+ AHP P ++
Sbjct: 72 NWDSAQEQ----LPHLGVRWDSHIINRVLKAHP--------------------PMQKAWL 107
Query: 109 FFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRY 168
FFNWA +K F Y MLD+ G+ + + MK +GV I T++ LI
Sbjct: 108 FFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWV 167
Query: 169 VRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDV 227
+G A+ + M D G P V+ + + L R EEA + + ++ R P+
Sbjct: 168 SSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNC 227
Query: 228 ILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAE 287
YT L+ GK E A +IF M++ G++P+ +I+I + G+ + V
Sbjct: 228 HTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVY 287
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQ----------------------------- 318
M + G F + AG ++ +L+
Sbjct: 288 MKENGVVLRYPIFVEALETLKAAGESDDLLREVNSHISVESLCSSDIDETPTAEVNDTKN 347
Query: 319 ----------------------VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLN 356
+ NQM+ N D+ + +IE +C E A +
Sbjct: 348 SDDSRVISSVLLMKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFD 407
Query: 357 LMVKKGVAPNSSTFNSIFGCIAKLHDV--------------------NGA---HRM-YAK 392
++ G+ S + ++ G + +++ GA HR+ + +
Sbjct: 408 YSLEMGIHLKKSAYLALIGNFLRSNELPKVIEVVKEMVKAQHSLGCYQGAMLIHRLGFGR 467
Query: 393 MKEL-----NCLPN----TLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRIL 443
L + LP+ Y LM ++ + S + +K+ +EM E ++ P++ TY +L
Sbjct: 468 RPRLAADVFDLLPDDQKGVAAYTALMDVYISAGSPEKAMKILREMREREIMPSLGTYDVL 527
Query: 444 ILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENV 479
+ + + L+++ E+KSL + + ENV
Sbjct: 528 LSGLEKTSDFQKEVALLRK--EKKSLVASARFRENV 561
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 110/250 (44%), Gaps = 8/250 (3%)
Query: 260 PNVHTYSIV--IDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVL 317
P+V+T IV I ++ + A + + G ++ N +++ H +
Sbjct: 53 PSVYTRDIVSNIYNILKYSNWDSAQEQLPHL---GVRWDSHIINRVLKAHPPMQKAWLFF 109
Query: 318 QVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCI 377
Q+K F D Y +++ ++ V +LM +KGV ++ T+ S+ +
Sbjct: 110 NWAAQIKGFK--HDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWV 167
Query: 378 AKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNV 437
+ DV+GA R++ +M++ C P ++Y M+M ++ ++ KEM ++V PN
Sbjct: 168 SSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNC 227
Query: 438 NTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVE 497
+TY +L+ G A + +M +E ++P+ ++ K G+ ++
Sbjct: 228 HTYTVLMEYLVATGKCEEALDIFFKM-QEIGVQPDKAACNILIAKALKFGETSFMTRVLV 286
Query: 498 KMVARGFVSR 507
M G V R
Sbjct: 287 YMKENGVVLR 296
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 7/200 (3%)
Query: 292 GCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEA 351
G + T+ +++ + +AGR + + VF+ MK DT+ Y LI +++ A
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 352 VKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRM 411
+++ M G P ++ + + V A +Y +M PN TY +LM
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 412 FAESKSIDMVLKLKKEMDENQVEPNVNTYRILI---LMFCEKGHWNNAYKLMKEMVEEKS 468
+ + L + +M E V+P+ ILI L F E MK E
Sbjct: 237 LVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMK----ENG 292
Query: 469 LKPNLQVYENVLELLRKAGQ 488
+ ++ LE L+ AG+
Sbjct: 293 VVLRYPIFVEALETLKAAGE 312
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 170/379 (44%), Gaps = 19/379 (5%)
Query: 124 EPYIE--MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAF 181
+P++E +D+ + A ++ D M R V T++ +I RY R GL EA F
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVV----TWNTMIERYCRFGLVDEAFKLF 200
Query: 182 NRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRA 240
M+D V PD++ + +VS+ R ++ ++ +++ D L T+L+ + A
Sbjct: 201 EEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGA 260
Query: 241 GKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTF 300
G ++ A E F+ M N+ + ++ +CG++ A +F D + V +
Sbjct: 261 GCMDMAREFFRKMS----VRNLFVSTAMVSGYSKCGRLDDAQVIF----DQTEKKDLVCW 312
Query: 301 NSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVK 360
+++ +V++ ++ L+VF +M D + +I L++A V + +
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 361 KGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDM 420
G+ S N++ AK ++ ++ KM N + + N L S ++ +
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSL 432
Query: 421 VLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVL 480
++K+E VEPN T+ ++ G K+ M +E ++ P L+ Y ++
Sbjct: 433 FARMKQE----NVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMV 488
Query: 481 ELLRKAGQLKMHEELVEKM 499
+L +A L+ E++E M
Sbjct: 489 DLFGRANLLREALEVIESM 507
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 154/341 (45%), Gaps = 13/341 (3%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV 219
+++ LI Y + G A +A++ + ME GV PD V + +VSS + F++ V
Sbjct: 224 SWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV 283
Query: 220 KDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
K+ + L +L+ + + G I A IF +++ K + +++ +I RCG +
Sbjct: 284 KENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE----KRTIVSWTTMISGYARCGLL 339
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
+ +F +M + + V +N+++ V+A R + L +F +M+ N D I
Sbjct: 340 DVSRKLFDDMEE----KDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHC 395
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNC 398
+ + L+ + + + K ++ N + S+ AK +++ A ++ ++
Sbjct: 396 LSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT--- 452
Query: 399 LPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYK 458
N+LTY ++ A + EM + + P+ T+ L+ C G
Sbjct: 453 -RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRD 511
Query: 459 LMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
+M +L P L+ Y +++LL +AG L+ + L+E M
Sbjct: 512 YFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 153/352 (43%), Gaps = 35/352 (9%)
Query: 90 VIEKCGAIRHGIPFYQSL---AFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLI 146
+ KCG I + +L +W T + + +LD++ KL
Sbjct: 301 MFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCG-----LLDVSRKL---------F 346
Query: 147 DSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRK 206
D M+ + V + ++ +I V+A +A+ F M+ PD++ + I S C +
Sbjct: 347 DDMEEKDVVL----WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM-IHCLSACSQ 401
Query: 207 RRAEEAQSFFDSVKDRFEP--DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHT 264
A + + +++ +V L TSL+ + + G I A +F ++ N T
Sbjct: 402 LGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQ----TRNSLT 457
Query: 265 YSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMK 324
Y+ +I L G + A F EMIDAG P+ +TF L+ G + F+QMK
Sbjct: 458 YTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMK 517
Query: 325 -RFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLH-D 382
RFN Y+ +++ R LEEA +++ M + A +FGC ++H +
Sbjct: 518 SRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGAL--LFGC--RMHGN 573
Query: 383 VNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVE 434
V + K+ EL+ ++ Y +L M+ E+ + + ++ M+E VE
Sbjct: 574 VELGEKAAKKLLELD-PSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVE 624
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 130/269 (48%), Gaps = 8/269 (2%)
Query: 233 LIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDA- 291
+I + +AG ++A + F +M G K +V +++ + L + H ++ + DA
Sbjct: 112 IIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDL---HTIWEFLHDAP 168
Query: 292 ---GCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL 348
G + +AV+FN ++ + G + +M++ D + Y LI + E
Sbjct: 169 SKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERC 228
Query: 349 EEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNIL 408
+ NLMV KG PN +TFN + A+ + M +L P+++TYN++
Sbjct: 229 VIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMV 288
Query: 409 MRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
++ F ++ DM ++ M +PN+ Y+ +I C+ G+++ AY + K+ + +K
Sbjct: 289 IKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKK- 347
Query: 469 LKPNLQVYENVLELLRKAGQLKMHEELVE 497
PNL E +L+ L K GQL + ++E
Sbjct: 348 WYPNLDTVEMLLKGLVKKGQLDQAKSIME 376
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 3/264 (1%)
Query: 159 ETFSV-LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFD 217
E F V +I Y +AG+ +A+ F M+ YG + + + L F
Sbjct: 106 EGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLH 165
Query: 218 SVKDRF--EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRC 275
++ + D + + I +C G ++ A ++M+ +G+ P+V TY+ +I +L +
Sbjct: 166 DAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKH 225
Query: 276 GQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGY 335
+ + ++ M+ GC PN TFN ++ V R + M + D+I Y
Sbjct: 226 ERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITY 285
Query: 336 NFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKE 395
N +I+ + A +V M KG PN + ++ + K + + A+ M
Sbjct: 286 NMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMR 345
Query: 396 LNCLPNTLTYNILMRMFAESKSID 419
PN T +L++ + +D
Sbjct: 346 KKWYPNLDTVEMLLKGLVKKGQLD 369
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 131/309 (42%), Gaps = 37/309 (11%)
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDA--GIKPNVHTYSIVIDSLCRCGQITRA 281
E D++ + SLI G C+ GK + A ++F DMKD +KP+ + V ++ +
Sbjct: 436 EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFG 495
Query: 282 HDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIEC 341
V MI G N +SL+ ++ K G E L+VF M N A +N +I C
Sbjct: 496 LQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA----WNSMISC 551
Query: 342 HCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIF----------------------GCIAK 379
+ R+ E ++ + NLM+ +G+ P+S + S+ G +
Sbjct: 552 YSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSD 611
Query: 380 LHDVNGAHRMYAKMKELNCLPNT---------LTYNILMRMFAESKSIDMVLKLKKEMDE 430
H N MY K N +T+N+++ + L L EM +
Sbjct: 612 THLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKK 671
Query: 431 NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK 490
P+ T+ LI G + + M ++ ++PN++ Y N+++LL +AG L+
Sbjct: 672 AGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLE 731
Query: 491 MHEELVEKM 499
++ M
Sbjct: 732 EAYSFIKAM 740
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/495 (20%), Positives = 203/495 (41%), Gaps = 82/495 (16%)
Query: 73 FSRLSAAHPISPS--TARRVIEKCGAI---RHGIPFYQSLAFFNWATSLKNFPSSPEPYI 127
+S+ + P S T +++ C A+ +G + S+ W +P+I
Sbjct: 47 YSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRY---------DPFI 97
Query: 128 --EMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSV---LIRRYVRAGLAAEAVHAFN 182
++++ K D A + D ++A +V +I Y + E V F
Sbjct: 98 ATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFR 157
Query: 183 RMEDYGVAPDKVAVSIVVSSLCRK---RRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCR 239
RM +GV PD ++SIVVS +C++ RR E Q +++ + D L T+LI + +
Sbjct: 158 RMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFK 217
Query: 240 AGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVF-------------- 285
G A +F +++D K NV ++++I G + D++
Sbjct: 218 FGLSIDAWRVFVEIED---KSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTS 274
Query: 286 ---------------------AEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM- 323
+++ G + + SL+ ++ K G + VF+ +
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV 334
Query: 324 -KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHD 382
KR +N ++ + ++ A+ + M +K V P+S T +++ C + L
Sbjct: 335 DKRLEI------WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGL 388
Query: 383 VNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRI 442
N ++A++ + + + L+ ++++ + K M+ E ++ +
Sbjct: 389 YNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME----EKDMVAWGS 444
Query: 443 LILMFCEKGHWNNAYKLMKEMV-EEKSLKPNLQVYENV------LELLRKAGQLKMHEEL 495
LI C+ G + A K+ +M ++ SLKP+ + +V LE LR L++H +
Sbjct: 445 LISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFG--LQVHGSM 502
Query: 496 VEK-MVARGFVSRPL 509
++ +V FV L
Sbjct: 503 IKTGLVLNVFVGSSL 517
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 144/348 (41%), Gaps = 65/348 (18%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
++DL K ++A + SM T + ++ +I Y R L ++ FN M G
Sbjct: 517 LIDLYSKCGLPEMALKVFTSMSTENMV----AWNSMISCYSRNNLPELSIDLFNLMLSQG 572
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFD-SVKDRFEPDVILYTSLIHGWCRAGKIERAE 247
+ PD V+++ V+ ++ + +S +++ D L +LI + + G + AE
Sbjct: 573 IFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAE 632
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
IFK M+ ++ T++++I G A +F EM AG +P+ VTF SL+
Sbjct: 633 NIFKKMQ----HKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISAC 688
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
+G E+ +F MK+ ++ IE N+E +++L+ + G+ +
Sbjct: 689 NHSGFVEEGKNIFEFMKQ----------DYGIE-----PNMEHYANMVDLLGRAGLLEEA 733
Query: 368 STF---------NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSI 418
+F +SI+ C+ + A N L+ L+RM E S
Sbjct: 734 YSFIKAMPIEADSSIWLCL-----------LSASRTHHNVELGILSAEKLLRMEPERGS- 781
Query: 419 DMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEE 466
TY LI ++ E G N A KL+ M E+
Sbjct: 782 --------------------TYVQLINLYMEAGLKNEAAKLLGLMKEK 809
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 152/317 (47%), Gaps = 6/317 (1%)
Query: 191 PDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIF 250
P K S+V KR E+ + +S +RF ++ +Y + A ++ EEI
Sbjct: 40 PQKSLTSLVNGERNPKRIVEKFKKACES--ERFRTNIAVYDRTVRRLVAAKRLHYVEEIL 97
Query: 251 KDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKA 310
++ K + +I + G A VF EM + C + ++FN+L+ + +
Sbjct: 98 EEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLS 157
Query: 311 GRTEKVLQVFNQM-KRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSST 369
+ + V ++FN++ + + D + YN LI+ C ++L EAV +L+ + KG+ P+ T
Sbjct: 158 KKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVT 217
Query: 370 FNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNI-LMRMFAESKSIDMVLKLKKEM 428
FN++ ++AKM E N + TYN L+ + E+KS ++V L E+
Sbjct: 218 FNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELV-NLFGEL 276
Query: 429 DENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQ 488
+ ++P+V ++ +I +G + A KE+V+ +P+ + +L + KAG
Sbjct: 277 KASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKH-GYRPDKATFALLLPAMCKAGD 335
Query: 489 LKMHEELVEKMVARGFV 505
+ EL ++ ++ ++
Sbjct: 336 FESAIELFKETFSKRYL 352
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 114/253 (45%), Gaps = 2/253 (0%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRM-EDY 187
++ L GK F+ A + + M R + + +F+ L+ Y + FN +
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 188 GVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERA 246
+ PD V+ + ++ +LC K EA + D ++++ +PD++ + +L+ G+ E
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 247 EEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRV 306
EEI+ M + + ++ TY+ + L + ++F E+ +G P+ +FN+++R
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 307 HVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPN 366
+ G+ ++ + ++ + D + L+ C+ + E A+++ K
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVG 354
Query: 367 SSTFNSIFGCIAK 379
+T + + K
Sbjct: 355 QTTLQQLVDELVK 367
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/239 (18%), Positives = 114/239 (47%), Gaps = 3/239 (1%)
Query: 155 EITAETFSV-LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQ 213
+++ E F+ +I Y +AG+ A F M + ++ + ++S+ ++ + +
Sbjct: 105 DMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVE 164
Query: 214 SFFDSVKDRF--EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDS 271
F+ + + +PD++ Y +LI C + A + ++++ G+KP++ T++ ++ S
Sbjct: 165 ELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS 224
Query: 272 LCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
GQ +++A+M++ + T+N+ + ++++++ +F ++K D
Sbjct: 225 SYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPD 284
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMY 390
+N +I + ++EA +VK G P+ +TF + + K D A ++
Sbjct: 285 VFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELF 343
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 84/179 (46%), Gaps = 1/179 (0%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L+D ++ +G++ TF+ L+ G + +M + VA D + +
Sbjct: 199 AVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLL 258
Query: 202 SLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKP 260
L + +++E + F +K +PDV + ++I G GK++ AE +K++ G +P
Sbjct: 259 GLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRP 318
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV 319
+ T+++++ ++C+ G A ++F E T L+ VK + E+ ++
Sbjct: 319 DKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEI 377
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 207/466 (44%), Gaps = 60/466 (12%)
Query: 70 ALEFSRLSAAHPISPSTARRVIEKCGAIRHGIPFYQSLAFFN-WATSLKNFPSSPEPYIE 128
+E +R++ + +S S +E+ G H I + N TSL NF
Sbjct: 269 GVEPTRVTVSTCLSASANMGGVEE-GKQSHAIAIVNGMELDNILGTSLLNFYC------- 320
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
K+ + A + D M + V T++++I YV+ GL +A++ M
Sbjct: 321 ------KVGLIEYAEMVFDRMFEKDVV----TWNLIISGYVQQGLVEDAIYMCQLMRLEK 370
Query: 189 VAPDKVAVSIVVSSLCRK---RRAEEAQSF-----FDS-------VKDRF---------- 223
+ D V ++ ++S+ R + +E Q + F+S V D +
Sbjct: 371 LKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAK 430
Query: 224 -------EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCG 276
E D+IL+ +L+ + +G A +F M+ G+ PNV T++++I SL R G
Sbjct: 431 KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNG 490
Query: 277 QITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYN 336
Q+ A D+F +M +G PN +++ ++M V+ G +E+ + +M+ +
Sbjct: 491 QVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSIT 550
Query: 337 FLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFN---SIFGCIAKLHDVNGAHRMYAKM 393
+ +L + +++ +SS + S+ AK D+N A +++
Sbjct: 551 VALSACAHLASLHIGRTIHGYIIRN--LQHSSLVSIETSLVDMYAKCGDINKAEKVFGS- 607
Query: 394 KELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHW 453
K + LP + N ++ +A ++ + L + ++ ++P+ T ++ G
Sbjct: 608 KLYSELPLS---NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDI 664
Query: 454 NNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
N A ++ ++V ++S+KP L+ Y +++LL AG+ + L+E+M
Sbjct: 665 NQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM 710
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 165/349 (47%), Gaps = 22/349 (6%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
+ D+ GK D A + D + R A ++ L+ YV+ G EA+ F+ M G
Sbjct: 214 LADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQG 269
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEA-QSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAE 247
V P +V VS +S+ EE QS ++ + E D IL TSL++ +C+ G IE AE
Sbjct: 270 VEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAE 329
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
+F M + +V T++++I + G + A + M + VT +LM
Sbjct: 330 MVFDRM----FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSA- 384
Query: 308 VKAGRTEKVLQVFNQMK----RFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
A RTE L++ +++ R + +D + + +++ + + ++ +A KV + V+K +
Sbjct: 385 --AARTEN-LKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDL 441
Query: 364 APNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLK 423
+N++ A+ A R++ M+ PN +T+N+++ + +D
Sbjct: 442 I----LWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKD 497
Query: 424 LKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPN 472
+ +M + + PN+ ++ ++ + G A +++M +E L+PN
Sbjct: 498 MFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM-QESGLRPN 545
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 136/301 (45%), Gaps = 22/301 (7%)
Query: 210 EEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVI 269
++A FD + DR + + + +L+ G+ + GK E A +F DM+ G++P T S +
Sbjct: 225 DDASKVFDEIPDR---NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 270 DSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCA 329
+ G + A I G + + SL+ + K G E VF++M
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFE---- 337
Query: 330 ADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRM 389
D + +N +I + + +E+A+ + LM + + + T ++ A+ ++
Sbjct: 338 KDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLK----- 392
Query: 390 YAKMKELNCLPNTLTYNI-----LMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILI 444
K + C+ ++ +I +M M+A+ SI + KK D + VE ++ + L+
Sbjct: 393 LGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSI---VDAKKVFD-STVEKDLILWNTLL 448
Query: 445 LMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+ E G A +L M + + + PN+ + ++ L + GQ+ +++ +M + G
Sbjct: 449 AAYAESGLSGEALRLFYGM-QLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGI 507
Query: 505 V 505
+
Sbjct: 508 I 508
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 114/249 (45%), Gaps = 4/249 (1%)
Query: 131 DLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVA 190
+LAG++ A ++ M G ++++F+ ++ V A L E F GV
Sbjct: 143 NLAGRINR---AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVE 199
Query: 191 PDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAEEI 249
D ++I++ LC E A D + + P+V+ ++ LI G+C GK E A ++
Sbjct: 200 IDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKL 259
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVK 309
+ M+ I+P+ T++I+I L + G++ D+ M GC PN T+ ++ +
Sbjct: 260 LERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLD 319
Query: 310 AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSST 369
R + ++ +QM + + Y ++ C +++ E VL MV G P +
Sbjct: 320 KKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLM 379
Query: 370 FNSIFGCIA 378
+ + C+
Sbjct: 380 WWKVVQCVV 388
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 145/319 (45%), Gaps = 24/319 (7%)
Query: 211 EAQSFFDSVKD---------------RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKD 255
E FD+VKD ++P LY +I+ + +A + EE+ + +K
Sbjct: 64 EVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIK- 122
Query: 256 AGIKPNVHTYSIVIDSLCR-----CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKA 310
++ +L R G+I RA ++ M D GC P++ +FN ++ + V A
Sbjct: 123 --LEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSA 180
Query: 311 GRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
+++ ++F + D N LI+ C NLE A+++L+ ++ PN TF
Sbjct: 181 KLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTF 240
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE 430
+ + A ++ +M++ P+T+T+NIL+ + ++ + L + M
Sbjct: 241 SPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKV 300
Query: 431 NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLK 490
EPN TY+ ++ +K A ++M +M+ ++P+ Y+ ++ L + +
Sbjct: 301 KGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISW-GMRPSFLSYKKMVLGLCETKSVV 359
Query: 491 MHEELVEKMVARGFVSRPL 509
+ ++ +MV GFV + L
Sbjct: 360 EMDWVLRQMVNHGFVPKTL 378
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 123/277 (44%), Gaps = 7/277 (2%)
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK----DRFEPDVILYTS 232
A +++ +DY P + +++++ + + +E + ++K RF +
Sbjct: 81 AYQHYSKRKDY--QPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLM 138
Query: 233 LIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAG 292
I+G AG+I RA EI M D G P+ +++ +++ L H +F G
Sbjct: 139 RIYG-NLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLG 197
Query: 293 CNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAV 352
+A N L++ ++G E LQ+ ++ + + + ++ LI C EEA
Sbjct: 198 VEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAF 257
Query: 353 KVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMF 412
K+L M K+ + P++ TFN + + K V + +MK C PN TY ++
Sbjct: 258 KLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL 317
Query: 413 AESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCE 449
+ K ++ +M + P+ +Y+ ++L CE
Sbjct: 318 LDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCE 354
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 2/224 (0%)
Query: 119 FPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAV 178
+PSS + + +L+L + FD + S GVEI A ++LI+ +G A+
Sbjct: 164 WPSS-KSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAAL 222
Query: 179 HAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGW 237
+ P+ + S ++ C K + EEA + + K+R EPD I + LI G
Sbjct: 223 QLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGL 282
Query: 238 CRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNA 297
+ G++E ++ + MK G +PN TY V+ L + A ++ ++MI G P+
Sbjct: 283 RKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSF 342
Query: 298 VTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIEC 341
+++ ++ + ++ V QM T+ + +++C
Sbjct: 343 LSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQC 386
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 163/379 (43%), Gaps = 19/379 (5%)
Query: 135 KLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDY-----GV 189
++R ++A + D M+ G+ + T SVLI +++ + +Y
Sbjct: 209 EIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDT 268
Query: 190 APDKVAVSIVVSSLCRKR------RAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKI 243
+ A + +V S+CR+ E S +SV F Y +I CR +
Sbjct: 269 SMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFA-----YGHMIDSLCRYRRN 323
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
A I MK G+KP +Y+ +I LC+ G RA+ + E + P+ T+ L
Sbjct: 324 HGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLL 383
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
M K T K V M R A T YN + C +N E + VL M++
Sbjct: 384 MESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDC 443
Query: 364 APNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELN-CLPNTLTYNILM-RMFAESKSIDMV 421
P+ T N++ + K+ V+ A ++ M C P+ +T N +M + A+ ++ + +
Sbjct: 444 RPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEAL 503
Query: 422 LKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
L + M EN+++P V Y +I + + A + ++ E+ S+ + Y +++
Sbjct: 504 DVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQL-EKASVTADSTTYAIIID 562
Query: 482 LLRKAGQLKMHEELVEKMV 500
L ++ M ++ + ++
Sbjct: 563 GLCVTNKVDMAKKFWDDVI 581
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 161/381 (42%), Gaps = 5/381 (1%)
Query: 126 YIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME 185
Y M+D + R A ++ MK++G++ +++ +I + G A
Sbjct: 310 YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGS 369
Query: 186 DYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPD-VILYTSLIHGWCRAGKIE 244
++ P + +++ SLC++ +A++ + + + D +Y + G C
Sbjct: 370 EFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPT 429
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAG-CNPNAVTFNSL 303
+ M +P+ +T + VI+ LC+ G++ A V +M+ C P+AVT N++
Sbjct: 430 EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTV 489
Query: 304 MRVHVKAGRTEKVLQVFNQ-MKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKG 362
M + GR E+ L V N+ M + YN +I + +EA+ V + K
Sbjct: 490 MCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKAS 549
Query: 363 VAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVL 422
V +S+T+ I + + V+ A + + + + + Y ++ +S +
Sbjct: 550 VTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDAC 609
Query: 423 KLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLEL 482
++ ++ PNV Y +I G AY++++EM K+ + V +L+
Sbjct: 610 HFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEM--RKNGQAPDAVTWRILDK 667
Query: 483 LRKAGQLKMHEELVEKMVARG 503
L + L + EL+ G
Sbjct: 668 LHDSMDLTVERELISNPATSG 688
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/432 (19%), Positives = 156/432 (36%), Gaps = 82/432 (18%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
R+ D A ++D + RG + S +I AG EA F G PD+
Sbjct: 69 RNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTC 128
Query: 197 SIVVSSLCRKRRAEEAQSFFDSV---KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
+++++ L R + K F P + Y L++ C ++ A ++ DM
Sbjct: 129 NVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDM 188
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVT-------------- 299
++ G P+V T++ +I C ++ AH VF EM G PN++T
Sbjct: 189 RNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDV 248
Query: 300 --------------------------FNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTI 333
F +L+ + G + ++ M
Sbjct: 249 ETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEF 308
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM 393
Y +I+ CR A +++ +M KG+ P +++N+I + K A+++ +
Sbjct: 309 AYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEG 368
Query: 394 KELNCLPNTLTYNILMRMFAESKSID-------MVLKLKKE------------------- 427
E P+ TY +LM K +D + L L+KE
Sbjct: 369 SEFEFFPSEYTYKLLMESLC--KELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMD 426
Query: 428 -----------MDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVY 476
M + P+ T +I C+ G ++A K++ +M+ K P+
Sbjct: 427 NPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTL 486
Query: 477 ENVLELLRKAGQ 488
V+ L G+
Sbjct: 487 NTVMCGLLAQGR 498
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 171/396 (43%), Gaps = 60/396 (15%)
Query: 119 FPSSPEPYIEMLD--LAGKLRHFDLA--WHLIDSMKTRGVEITAETFSVLIRRYVRAGLA 174
F P+P + + ++G L+H + L+ M G + T S++++ G
Sbjct: 92 FDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGST 151
Query: 175 -------AEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDV 227
VHA R+ V D V ++ +V + + + E A++ F+++KD +V
Sbjct: 152 MILPRSLCRLVHA--RIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDE---NV 206
Query: 228 ILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQIT-RAHDVFA 286
+ TS+I G+ G +E AEEIF K ++ Y+ +++ R G+ R+ D++
Sbjct: 207 VCCTSMISGYMNQGFVEDAEEIFNTTK----VKDIVVYNAMVEGFSRSGETAKRSVDMYI 262
Query: 287 EMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDE 346
M AG +PN TF A IG ++ H
Sbjct: 263 SMQRAGFHPNISTF-----------------------------ASVIGACSVLTSH---- 289
Query: 347 NLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYN 406
E +V ++K GV + +S+ AK +N A R++ +M+E N ++
Sbjct: 290 --EVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQE----KNVFSWT 343
Query: 407 ILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEE 466
++ + ++ + + L+L M E ++EPN T+ + G + Y++ + M +
Sbjct: 344 SMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRD 403
Query: 467 KSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
S+KP ++ Y +++L+ +AG L E M R
Sbjct: 404 YSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER 439
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 122/269 (45%), Gaps = 49/269 (18%)
Query: 229 LYTSLIHGWCRAGKIERAEEIFKDM---KDAGIKPNVHTYSIVIDSLCRCGQ-------- 277
LY S+I + +AGK+ RA IF+ M K+ +P + TY I+ +L G
Sbjct: 209 LYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVY 268
Query: 278 ITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR-FNCAADTIGYN 336
+ +F +M+D+G P+ N L++ +V + L++F+QM ++C ++ Y+
Sbjct: 269 METVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYD 328
Query: 337 FLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKEL 396
+LI G+ T N A + ++MK
Sbjct: 329 YLIH---------------------GLCAQGRTIN--------------ARELLSEMKGK 353
Query: 397 NCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNA 456
+PN +YN L+ FA S ID +K EM EN + +YR L+ C KG ++ A
Sbjct: 354 GFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEA 413
Query: 457 YKLMKEMVEEKSLKPNLQVYENVLELLRK 485
+L+ EM+ EK L + Y+ ++ +L K
Sbjct: 414 TRLL-EMLREKQL-VDRDSYDKLVNVLHK 440
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 19/276 (6%)
Query: 109 FFNWATSLKNFPSSPEPY---IEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLI 165
FNWA+ F Y I L A + D + + S++ G E ++ +I
Sbjct: 158 LFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNE---NLYNSII 214
Query: 166 RRYVRAGLAAEAVHAFNRM---EDYGVAPDKVAVSIVVSSLCRKRR--------AEEAQS 214
+ +AG AV+ F M ++ P I+ +L + E +S
Sbjct: 215 FYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRS 274
Query: 215 FFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDA-GIKPNVHTYSIVIDSL 272
F + D EPDV L+ G+ + + A IF M +PN TY +I L
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 273 CRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADT 332
C G+ A ++ +EM G PN ++NSL+ +G + ++ +M D
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 394
Query: 333 IGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSS 368
I Y L++ CR +EA ++L ++ +K + S
Sbjct: 395 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDS 430
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/398 (19%), Positives = 169/398 (42%), Gaps = 12/398 (3%)
Query: 117 KNFPS---SPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGL 173
+ FPS + Y M+D+ GK ++I+ MK E F+ +IR + RAG
Sbjct: 37 ERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGR 96
Query: 174 AAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPD--VILYT 231
+A+ F + ++ ++ ++ + ++ E A F +E + +
Sbjct: 97 LEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALN 156
Query: 232 SLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRA----HDVFAE 287
L+ C+ + + A ++F++M G P+ +Y I++ C G++ A + +F
Sbjct: 157 LLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWR 216
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRD-- 345
+ G + V + L+ AG + +++ ++ R A Y+ + H
Sbjct: 217 ISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSS 276
Query: 346 ENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTY 405
E +E ++L + +G P +++++ + + + + M+ P Y
Sbjct: 277 EGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIY 336
Query: 406 NILMRMFAESKSI-DMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
++ + + + V + KEM + P V Y +LI C+ G A +K+M
Sbjct: 337 GAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMS 396
Query: 465 EEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
++ S N + Y+ +++ L + GQ +++E+M+ +
Sbjct: 397 KQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIK 434
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 109/276 (39%), Gaps = 44/276 (15%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVH----AFNRMEDYGVAPDKVA 195
DLA + M +G +++ +L++ + G EA H F R+ G D V
Sbjct: 169 DLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVV 228
Query: 196 VSIVVSSLCRKRRAEEA-----------------------QSFFDSVKDRFE-------- 224
I++ +LC ++A ++S + E
Sbjct: 229 YRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTE 288
Query: 225 -------PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQ 277
P + Y+++ GK+ EE+ M+ G +P Y + +LCR G+
Sbjct: 289 TLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGK 348
Query: 278 ITRAHDVF-AEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM-KRFNCAADTIGY 335
+ A V EM+ C P +N L++ G++ + + +M K+ +C A+ Y
Sbjct: 349 LKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETY 408
Query: 336 NFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFN 371
L++ CRD EA +V+ M+ K P T++
Sbjct: 409 QTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYH 444
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 37/247 (14%)
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
N Y+ +ID L + ++ V M + C F S++R +AGR E + +F
Sbjct: 45 NGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLF 104
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ FNC ++ ++ L++ ++ LE A +
Sbjct: 105 KSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIF------------------------- 139
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
R Y E+N L N+LM++ + D+ ++ +EM+ P+ ++Y
Sbjct: 140 -------RKYCYGWEVNSRITAL--NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSY 190
Query: 441 RILILMFCEKGHWNNAYKLMKEM---VEEKSLKPNLQVYENVLELLRKAGQLKMHEELVE 497
RIL+ FC +G A L+ M + +K ++ VY +L+ L AG++ E++
Sbjct: 191 RILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILG 250
Query: 498 KMVARGF 504
K++ +G
Sbjct: 251 KILRKGL 257
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 64/164 (39%), Gaps = 3/164 (1%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
L+ RG +++S + G E M G P V +LC
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 205 RKRRAEEAQSFFDS--VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM-KDAGIKPN 261
R + +EA S + ++ P V +Y LI G C GK A K M K N
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 262 VHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMR 305
TY ++D LCR GQ A V EM+ P T++ +++
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIK 448
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 3/159 (1%)
Query: 148 SMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV-SIVVSSLCRK 206
+M+++G E T + ++ RAG EAV N+ G V V ++++ LC
Sbjct: 323 AMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDD 382
Query: 207 RRAEEAQSFFDSVKDRFE--PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHT 264
++ EA + + + + Y +L+ G CR G+ A ++ ++M P V T
Sbjct: 383 GKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVET 442
Query: 265 YSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
Y ++I LC + A EM+ P + + +L
Sbjct: 443 YHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/398 (19%), Positives = 169/398 (42%), Gaps = 12/398 (3%)
Query: 117 KNFPS---SPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGL 173
+ FPS + Y M+D+ GK ++I+ MK E F+ +IR + RAG
Sbjct: 37 ERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGR 96
Query: 174 AAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPD--VILYT 231
+A+ F + ++ ++ ++ + ++ E A F +E + +
Sbjct: 97 LEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALN 156
Query: 232 SLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRA----HDVFAE 287
L+ C+ + + A ++F++M G P+ +Y I++ C G++ A + +F
Sbjct: 157 LLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWR 216
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRD-- 345
+ G + V + L+ AG + +++ ++ R A Y+ + H
Sbjct: 217 ISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSS 276
Query: 346 ENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTY 405
E +E ++L + +G P +++++ + + + + M+ P Y
Sbjct: 277 EGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIY 336
Query: 406 NILMRMFAESKSI-DMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
++ + + + V + KEM + P V Y +LI C+ G A +K+M
Sbjct: 337 GAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMS 396
Query: 465 EEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
++ S N + Y+ +++ L + GQ +++E+M+ +
Sbjct: 397 KQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIK 434
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 109/276 (39%), Gaps = 44/276 (15%)
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVH----AFNRMEDYGVAPDKVA 195
DLA + M +G +++ +L++ + G EA H F R+ G D V
Sbjct: 169 DLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVV 228
Query: 196 VSIVVSSLCRKRRAEEA-----------------------QSFFDSVKDRFE-------- 224
I++ +LC ++A ++S + E
Sbjct: 229 YRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTE 288
Query: 225 -------PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQ 277
P + Y+++ GK+ EE+ M+ G +P Y + +LCR G+
Sbjct: 289 TLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGK 348
Query: 278 ITRAHDVF-AEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM-KRFNCAADTIGY 335
+ A V EM+ C P +N L++ G++ + + +M K+ +C A+ Y
Sbjct: 349 LKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETY 408
Query: 336 NFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFN 371
L++ CRD EA +V+ M+ K P T++
Sbjct: 409 QTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYH 444
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 37/247 (14%)
Query: 261 NVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVF 320
N Y+ +ID L + ++ V M + C F S++R +AGR E + +F
Sbjct: 45 NGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLF 104
Query: 321 NQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL 380
+ FNC ++ ++ L++ ++ LE A +
Sbjct: 105 KSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIF------------------------- 139
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTY 440
R Y E+N L N+LM++ + D+ ++ +EM+ P+ ++Y
Sbjct: 140 -------RKYCYGWEVNSRITAL--NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSY 190
Query: 441 RILILMFCEKGHWNNAYKLMKEM---VEEKSLKPNLQVYENVLELLRKAGQLKMHEELVE 497
RIL+ FC +G A L+ M + +K ++ VY +L+ L AG++ E++
Sbjct: 191 RILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILG 250
Query: 498 KMVARGF 504
K++ +G
Sbjct: 251 KILRKGL 257
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 64/164 (39%), Gaps = 3/164 (1%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
L+ RG +++S + G E M G P V +LC
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 205 RKRRAEEAQSFFDS--VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM-KDAGIKPN 261
R + +EA S + ++ P V +Y LI G C GK A K M K N
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 262 VHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMR 305
TY ++D LCR GQ A V EM+ P T++ +++
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIK 448
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 3/159 (1%)
Query: 148 SMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV-SIVVSSLCRK 206
+M+++G E T + ++ RAG EAV N+ G V V ++++ LC
Sbjct: 323 AMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDD 382
Query: 207 RRAEEAQSFFDSVKDRFE--PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHT 264
++ EA + + + + Y +L+ G CR G+ A ++ ++M P V T
Sbjct: 383 GKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVET 442
Query: 265 YSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
Y ++I LC + A EM+ P + + +L
Sbjct: 443 YHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 182/431 (42%), Gaps = 82/431 (19%)
Query: 139 FDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSI 198
F+ A+ + D M E+ T++++I R ++ G EA+ F M G DK +S
Sbjct: 219 FENAYKVFDKMS----ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Query: 199 VVS--------SLCRKRRAEEAQS-FFDSVK-----------------------DRFEP- 225
V S SL ++ + +S D V+ DR E
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDH 334
Query: 226 DVILYTSLIHGWCRAGKI-ERAEEIFKDMKDAG-IKPNVHTYSIVIDSLCRCGQITR--- 280
V+ +T+LI G+ + + A +F +M G ++PN T+S + CG ++
Sbjct: 335 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA---CGNLSDPRV 391
Query: 281 AHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIE 340
V + G N+ NS++ + VK+ R E + F + N + YN ++
Sbjct: 392 GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN----LVSYNTFLD 447
Query: 341 CHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLP 400
CR+ N E+A K+L+ + ++ + ++ TF S+ +A + + ++++++ +L
Sbjct: 448 GTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSC 507
Query: 401 NTLTYNILMRMFAESKSIDM-------------------------------VLKLKKEMD 429
N N L+ M+++ SID VL+ +M
Sbjct: 508 NQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI 567
Query: 430 ENQVEPNVNTYRILILMFCEK-GHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQ 488
E V+PN TY + IL C G + ++ M E+ +KP ++ Y +++LL +AG
Sbjct: 568 EEGVKPNEVTY-VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGL 626
Query: 489 LKMHEELVEKM 499
L E + M
Sbjct: 627 LTDAFEFINTM 637
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 170/381 (44%), Gaps = 20/381 (5%)
Query: 133 AGKLRHFDLAWHLIDSMKTRGVE-ITAETFSVLIRRYVRAG--LAAEAVHAFNRMEDYGV 189
AG LR A +D M G+ + + TFS L++ +RA + VHA R+ ++ +
Sbjct: 39 AGDLRG---AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHA--RLIEFDI 93
Query: 190 APDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEI 249
PD V + ++S + + +A+ F++++ + DV+ +++++ + G+ A ++
Sbjct: 94 EPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKV 153
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFN-SLMRVHV 308
F + + G+ PN + Y+ VI + + ++ G + V SL+ + V
Sbjct: 154 FVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFV 213
Query: 309 KAGRT-EKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENL-EEAVKVLNLMVKKGVAPN 366
K + E +VF++M N T L+ C EA++ MV G +
Sbjct: 214 KGENSFENAYKVFDKMSELNVVTWT-----LMITRCMQMGFPREAIRFFLDMVLSGFESD 268
Query: 367 SSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKK 426
T +S+F A+L +++ ++++ + + L+ M+A+ + V +K
Sbjct: 269 KFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRK 326
Query: 427 EMDENQVEPNVNTYRILILMFCEKGHW-NNAYKLMKEMVEEKSLKPNLQVYENVLELLRK 485
D + + +V ++ LI + + + A L EM+ + ++PN + + +
Sbjct: 327 VFDRME-DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 486 AGQLKMHEELVEKMVARGFVS 506
++ ++++ + RG S
Sbjct: 386 LSDPRVGKQVLGQAFKRGLAS 406
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 149/313 (47%), Gaps = 26/313 (8%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
++D+ GK +D A + D M +R V T++ LI YV++ + + F M
Sbjct: 246 LVDMYGKCSCYDDAQKVFDEMPSRNVV----TWTALIAGYVQSRCFDKGMLVFEEMLKSD 301
Query: 189 VAPDKVAVSIVVSS------LCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGK 242
VAP++ +S V+S+ L R RR +K+ E + T+LI + + G
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRRVHCYM-----IKNSIEINTTAGTTLIDLYVKCGC 356
Query: 243 IERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNS 302
+E A +F+ + + NV+T++ +I+ G A D+F M+ + +PN VTF +
Sbjct: 357 LEEAILVFERLHE----KNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMA 412
Query: 303 LMRVHVKAGRTEKVLQVFNQMK-RFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKK 361
++ G E+ ++F MK RFN Y +++ R LEEA ++ M
Sbjct: 413 VLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERM--- 469
Query: 362 GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPN-TLTYNILMRMFAESKSIDM 420
+ P + + ++FG D YA + + P+ + Y +L +++ES++ D
Sbjct: 470 PMEPTNVVWGALFGSCLLHKDYELGK--YAASRVIKLQPSHSGRYTLLANLYSESQNWDE 527
Query: 421 VLKLKKEMDENQV 433
V +++K+M + QV
Sbjct: 528 VARVRKQMKDQQV 540
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 140/344 (40%), Gaps = 52/344 (15%)
Query: 110 FNWATSLKNFPSSPEPYIEMLDLAGKLRH--FDLAWHLIDSMKTRGVEITAETFSVLIRR 167
F + + F +P++ ++G FD A L D + + V T++ +I
Sbjct: 123 FQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVV----TWTAMIDG 178
Query: 168 YVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSL-----CRKRRA------------- 209
+VR G A+EA+ F M+ GVA +++ V V+ + R R+
Sbjct: 179 FVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKC 238
Query: 210 ------------------EEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFK 251
++AQ FD + R +V+ +T+LI G+ ++ ++ +F+
Sbjct: 239 DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR---NVVTWTALIAGYVQSRCFDKGMLVFE 295
Query: 252 DMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAG 311
+M + + PN T S V+ + G + R V MI N +L+ ++VK G
Sbjct: 296 EMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCG 355
Query: 312 RTEKVLQVFNQMKRFNCAADTIGYN-FLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
E+ + VF ++ N T N F + RD A + M+ V+PN TF
Sbjct: 356 CLEEAILVFERLHEKNVYTWTAMINGFAAHGYARD-----AFDLFYTMLSSHVSPNEVTF 410
Query: 371 NSIFGCIAKLHDVNGAHRMYAKMK-ELNCLPNTLTYNILMRMFA 413
++ A V R++ MK N P Y ++ +F
Sbjct: 411 MAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFG 454
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 133/317 (41%), Gaps = 13/317 (4%)
Query: 187 YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERA 246
+G+ D + ++S + A FD +D+ DV+ +T++I G+ R G A
Sbjct: 132 FGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDK---DVVTWTAMIDGFVRNGSASEA 188
Query: 247 EEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAG-CNPNAVTFNSLMR 305
F +MK G+ N T V+ + + + V ++ G + +SL+
Sbjct: 189 MVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVD 248
Query: 306 VHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP 365
++ K + +VF++M N + + LI + + ++ + V M+K VAP
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSRN----VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAP 304
Query: 366 NSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLK 425
N T +S+ A + ++ R++ M + + NT L+ ++ + ++ + +
Sbjct: 305 NEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVF 364
Query: 426 KEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRK 485
+ + E NV T+ +I F G+ +A+ L M+ + PN + VL
Sbjct: 365 ERLHEK----NVYTWTAMINGFAAHGYARDAFDLFYTMLSSH-VSPNEVTFMAVLSACAH 419
Query: 486 AGQLKMHEELVEKMVAR 502
G ++ L M R
Sbjct: 420 GGLVEEGRRLFLSMKGR 436
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 185/451 (41%), Gaps = 78/451 (17%)
Query: 90 VIEKCGAIRHGIPF---YQSLAFFNWATSLKNFPSSPEPYIE--MLDLAGKLRHFDLAWH 144
VI+ G R GI F + L FF +PY+ ++D+ K + A
Sbjct: 112 VIKSAG--RFGILFQALVEKLGFFK------------DPYVRNVIMDMYVKHESVESARK 157
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
+ D + R ++V+I Y + G EA F+ M + D V+ +++++
Sbjct: 158 VFDQISQR----KGSDWNVMISGYWKWGNKEEACKLFDMMPE----NDVVSWTVMITGFA 209
Query: 205 RKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHT 264
+ + E A+ +FD + E V+ + +++ G+ + G E A +F DM G++PN T
Sbjct: 210 KVKDLENARKYFDRMP---EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETT 266
Query: 265 YSIVI-----------------------------------DSLCRCGQITRAHDVFAEMI 289
+ IVI D +C I A +F E+
Sbjct: 267 WVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL- 325
Query: 290 DAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLE 349
G N VT+N+++ + + G Q+F+ M + N + +N LI + +
Sbjct: 326 --GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRN----VVSWNSLIAGYAHNGQAA 379
Query: 350 EAVKVLNLMVKKGVA-PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNIL 408
A++ M+ G + P+ T S+ + D+ + +++ N Y L
Sbjct: 380 LAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSL 439
Query: 409 MRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
+ M+A ++ + K+ DE + E +V +Y L F G L+ +M +E
Sbjct: 440 IFMYARGGNL---WEAKRVFDEMK-ERDVVSYNTLFTAFAANGDGVETLNLLSKMKDE-G 494
Query: 469 LKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
++P+ Y +VL +AG LK + + + +
Sbjct: 495 IEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 12/197 (6%)
Query: 132 LAGKLRHFDL--AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGV 189
++G R D+ A L D+M R V +++ LI Y G AA A+ F M DYG
Sbjct: 338 ISGYTRIGDMSSARQLFDTMPKRNVV----SWNSLIAGYAHNGQAALAIEFFEDMIDYGD 393
Query: 190 A-PDKVAVSIVVSSLCRKRRAEEAQSFFDSV-KDRFEPDVILYTSLIHGWCRAGKIERAE 247
+ PD+V + V+S+ E D + K++ + + Y SLI + R G + A+
Sbjct: 394 SKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAK 453
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
+F +MK+ +V +Y+ + + G ++ ++M D G P+ VT+ S++
Sbjct: 454 RVFDEMKER----DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTAC 509
Query: 308 VKAGRTEKVLQVFNQMK 324
+AG ++ ++F ++
Sbjct: 510 NRAGLLKEGQRIFKSIR 526
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 127 IEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMED 186
I +L G + +L ++D ++ +++ + LI Y R G EA F+ M++
Sbjct: 402 ISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKE 461
Query: 187 YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIER 245
D V+ + + ++ E + +KD EPD + YTS++ RAG ++
Sbjct: 462 ----RDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKE 517
Query: 246 AEEIFKDMKD 255
+ IFK +++
Sbjct: 518 GQRIFKSIRN 527
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 148/373 (39%), Gaps = 48/373 (12%)
Query: 153 GVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAP--DKVAVSIVVSSLCRKRRAE 210
G ++ + LI YV+ G +A F++ +P D V+ + ++ + E
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDK------SPHRDVVSYTALIKGYASRGYIE 217
Query: 211 EAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVID 270
AQ FD + + DV+ + ++I G+ G + A E+FKDM ++P+ T V+
Sbjct: 218 NAQKLFDEIPVK---DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274
Query: 271 SLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAA 330
+ + G I V + D G N N+L+ ++ K G E +F ++
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY----K 330
Query: 331 DTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAH--- 387
D I +N LI + +EA+ + M++ G PN T SI A L ++
Sbjct: 331 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 390
Query: 388 ---------------------RMYAKMKELNCLPNTL---------TYNILMRMFAESKS 417
MYAK ++ ++N ++ FA
Sbjct: 391 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 450
Query: 418 IDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYE 477
D L M + ++P+ T+ L+ G + + + M ++ + P L+ Y
Sbjct: 451 ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 510
Query: 478 NVLELLRKAGQLK 490
+++LL +G K
Sbjct: 511 CMIDLLGHSGLFK 523
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 212 AQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDS 271
A S F +++ EP+++++ ++ G + A +++ M G+ PN +T+ V+ S
Sbjct: 87 AISVFKTIQ---EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 272 LCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
+ + ++ GC+ + SL+ ++V+ GR E +VF++ D
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH----RD 199
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA 391
+ Y LI+ + +E A K+ + + K V ++N++ A+ + A ++
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVV----SWNAMISGYAETGNYKEALELFK 255
Query: 392 KMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
M + N P+ T ++ A+S SI++ ++ +D++ N+ LI ++ + G
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 452 HWNNAYKLMKEM 463
A L + +
Sbjct: 316 ELETACGLFERL 327
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 155/358 (43%), Gaps = 30/358 (8%)
Query: 139 FDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDY--GVAPDKVA- 195
FD + D + RG + A T S+L++++ + G EA EDY + P+ A
Sbjct: 233 FDSFDVIFDQISVRGF-VCAVTHSILVKKFCKQGKLDEA-------EDYLRALLPNDPAG 284
Query: 196 ----VSIVVSSLCRKRRAEEAQSFFDSVK-------DRFEPDVILYTSLIHGWCRAGKIE 244
+ I+V +LC KR+ +EA D +K DR Y I +AG +
Sbjct: 285 CGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDR------AYNIWIRALIKAGFLN 338
Query: 245 RAEEIFKDMKD-AGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
+ + + G + V Y+ ++ L + + +D+ EM+ G +PN T N+
Sbjct: 339 NPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAA 398
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
+ KAG ++ L+++ A + YN+LI C +E++E+A VL + +G
Sbjct: 399 LCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGH 458
Query: 364 APNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLK 423
TF+++ + + A + E + LP + ++ + ++ L
Sbjct: 459 FLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALM 518
Query: 424 LKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
+ + +++ V+ + + LI + A KL+ M +EK P +Y NV++
Sbjct: 519 INELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRM-QEKGYTPTRSLYRNVIQ 575
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 153/372 (41%), Gaps = 16/372 (4%)
Query: 107 LAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSM-KTRGVEITAETFSV-- 163
L FF+WA F + + + + LR L +ID + ++ G E + +
Sbjct: 130 LKFFDWAARQPGFHHTRATFHAIFKI---LRGAKLVTLMIDFLDRSVGFESCRHSLRLCD 186
Query: 164 -LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR 222
L+ Y AG A+ F M G+ D +++++L ++ + FD + R
Sbjct: 187 ALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVR 246
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDM---KDAGIKPNVHTYSIVIDSLCRCGQIT 279
+ ++ L+ +C+ GK++ AE+ + + AG + I++D+LC +
Sbjct: 247 GFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGL---GILVDALCSKRKFQ 303
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF-NCAADTIGYNFL 338
A + E+ G +N +R +KAG ++ C + YN +
Sbjct: 304 EATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSM 363
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNC 398
+ ++ NL+ +L M+ +GV+PN T N+ K V+ A +Y E+
Sbjct: 364 VFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGF 423
Query: 399 LPNTLTYNILMRMFAESKSIDMVLK-LKKEMDENQVEPNVNTYRILILMFCEKGHWNNAY 457
P ++YN L+ ++S++ LK +D T+ L C KG + A
Sbjct: 424 APTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGG-KTFSTLTNALCWKGKPDMAR 482
Query: 458 KLMKEMVEEKSL 469
+L+ E L
Sbjct: 483 ELVIAAAERDLL 494
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 114/257 (44%), Gaps = 5/257 (1%)
Query: 155 EITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQS 214
E + +++ I AG A ++ M+ G+ P + +++ S + + +A
Sbjct: 600 EHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALH 659
Query: 215 FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
FF ++++ + LY +I G C+A K++ A ++MK G++P++ Y + I LC
Sbjct: 660 FFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCN 719
Query: 275 CGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF-NCAADTI 333
+ A + E +G A N L+ A +++ V + + +M+ + +
Sbjct: 720 EEKYDEAVGLVNEFRKSGRRITAFIGNVLLH---NAMKSKGVYEAWTRMRNIEDKIPEMK 776
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM 393
LI ++E +K L+ +++K + T+N + I ++ A+ M ++
Sbjct: 777 SLGELIGLFSGRIDMEVELKRLDEVIEKCYPLDMYTYNMLLRMIV-MNQAEDAYEMVERI 835
Query: 394 KELNCLPNTLTYNILMR 410
+PN T IL R
Sbjct: 836 ARRGYVPNERTDMILER 852
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 144/333 (43%), Gaps = 29/333 (8%)
Query: 153 GVEITAETFSVLIRRYV---RAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRA 209
GV+ + + F+ LI + R +AA+ + RM++ G P + V+ +C
Sbjct: 527 GVDTSFKMFTSLIYGSITLMRGDIAAKLII---RMQEKGYTPTRSLYRNVIQCVCEMESG 583
Query: 210 EEAQSFFDSVK----DRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTY 265
E ++FF ++ +E V Y I G AGK + A ++ M GI P V +
Sbjct: 584 E--KNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASN 641
Query: 266 SIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR 325
+++ S + +I A F ++ + G + + ++ KA + + + +MK
Sbjct: 642 ILMLQSYLKNEKIADALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDAMHFLEEMKG 700
Query: 326 FNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDV-- 383
Y I+ C +E +EAV ++N K G + N + LH+
Sbjct: 701 EGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVL------LHNAMK 754
Query: 384 -NGAHRMYAKMKEL-NCLPNTLTYNILMRMFAESKSIDMVLKLKK--EMDENQVEPNVNT 439
G + + +M+ + + +P + L+ +F S IDM ++LK+ E+ E ++ T
Sbjct: 755 SKGVYEAWTRMRNIEDKIPEMKSLGELIGLF--SGRIDMEVELKRLDEVIEKCYPLDMYT 812
Query: 440 YRILILMFCEKGHWNNAYKLMKEMVEEKSLKPN 472
Y +L+ M +AY+ M E + + PN
Sbjct: 813 YNMLLRMIV-MNQAEDAYE-MVERIARRGYVPN 843
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 19/306 (6%)
Query: 195 AVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMK 254
A S+++ R+ E+A+ FF+ + E + +++ ++ G+ R G + A IF +
Sbjct: 179 AWSVMLGVYVNNRKMEDARKFFEDIP---EKNAFVWSLMMSGYFRIGDVHEARAIFYRV- 234
Query: 255 DAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTE 314
++ ++ +I + G A D F M G P+AVT +S++ ++GR +
Sbjct: 235 ---FARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLD 291
Query: 315 KVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIF 374
+V + + + N LI+ + + +LE A V + + VA NS+
Sbjct: 292 VGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVA----CCNSMI 347
Query: 375 GCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVE 434
C+A A M++ M+ L+ P+ +T+ ++ + LK+ EM V+
Sbjct: 348 SCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVK 407
Query: 435 PNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEE 494
PNV + LI + G AY+L+KEM +KPN + VL L A ++ M E
Sbjct: 408 PNVKHFGCLIHLLGRSGKLKEAYRLVKEM----HVKPN----DTVLGALLGACKVHMDTE 459
Query: 495 LVEKMV 500
+ E+++
Sbjct: 460 MAEQVM 465
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 159/407 (39%), Gaps = 96/407 (23%)
Query: 145 LIDSMKTRGVEITAETFSVLIR--------RYVRAGLAAEAVHAFNRMEDYGVAPDKVAV 196
SMK+RG+ T++ L++ R+ + F+R+ K+ +
Sbjct: 89 FFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRL-------GKIRI 141
Query: 197 SIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDA 256
VV R +AQ FD + +R +V+++ +I G+C +G +ER +FK M +
Sbjct: 142 G-VVELYTSGGRMGDAQKVFDEMSER---NVVVWNLMIRGFCDSGDVERGLHLFKQMSER 197
Query: 257 GIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTF---------------- 300
I +++ +I SL +CG+ A ++F EMID G +P+ T
Sbjct: 198 SIV----SWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTG 253
Query: 301 --------------------NSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIE 340
N+L+ + K+G E +F +M+R N + +N LI
Sbjct: 254 KWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRN----VVSWNTLIS 309
Query: 341 CHCRDENLEEAVKVLNLMVKKG-VAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKE-LNC 398
+ E + + + M+++G VAPN +TF + C + V ++ M E
Sbjct: 310 GSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKL 369
Query: 399 LPNTLTYNILMRMFAESKSIDMVLKLKKEMDEN--------------------------- 431
T Y ++ + + S I K K M N
Sbjct: 370 EARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAM 429
Query: 432 ---QVEP-NVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQ 474
++EP N Y +L ++ E+G W + K+ M + + K Q
Sbjct: 430 ELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQ 476
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 119/294 (40%), Gaps = 14/294 (4%)
Query: 211 EAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVI 269
E+ SFF S+K R D Y L+ + + + ++ G V+
Sbjct: 85 ESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVV 144
Query: 270 DSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCA 329
+ G++ A VF EM + N V +N ++R +G E+ L +F QM
Sbjct: 145 ELYTSGGRMGDAQKVFDEMSE----RNVVVWNLMIRGFCDSGDVERGLHLFKQMSE---- 196
Query: 330 ADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRM 389
+ +N +I + EA+++ M+ +G P+ +T ++ A L ++ +
Sbjct: 197 RSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWI 256
Query: 390 YAKMKELNCLPNTLTY-NILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFC 448
++ + + +T N L+ + +S ++ + ++M NV ++ LI
Sbjct: 257 HSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRR----NVVSWNTLISGSA 312
Query: 449 EKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
G L M+EE + PN + VL GQ++ EEL M+ R
Sbjct: 313 VNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMER 366
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/373 (18%), Positives = 165/373 (44%), Gaps = 10/373 (2%)
Query: 122 SPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAE----TFSVLIRRYVRAGLAAEA 177
SP Y +++ K+ L K++ + A+ ++++ ++G A EA
Sbjct: 208 SPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEA 267
Query: 178 VHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRF---EPDVILYTSLI 234
+ M+D G+ S+++ + R + F + +P++ L L+
Sbjct: 268 LEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLM 327
Query: 235 HGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCN 294
+ R G +E E+ M+ A +K +++ + A V+ + C
Sbjct: 328 Y--VREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECE 385
Query: 295 PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKV 354
VT+ + + + + K +F++M + + Y+ +++ + + L +AV++
Sbjct: 386 AGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRL 445
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
+ M ++G PN +NS+ + D+ A +++ +MK LP+ ++Y ++ +
Sbjct: 446 MAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNR 505
Query: 415 SKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQ 474
SK ++ ++L +E N+ + + I++ +F + + +L+++M E + + + +
Sbjct: 506 SKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGT-RLDAR 564
Query: 475 VYENVLELLRKAG 487
+Y + L LR AG
Sbjct: 565 LYSSALNALRDAG 577
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 149/316 (47%), Gaps = 24/316 (7%)
Query: 193 KVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKD 252
KVA S + S ++ + +EA FD + + D + + +I G + +++ A E+F
Sbjct: 178 KVAWSSMTSGYAKRGKIDEAMRLFDEMPYK---DQVAWNVMITGCLKCKEMDSARELF-- 232
Query: 253 MKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAG- 311
D + +V T++ +I CG A +F EM DAG +P+ VT SL+ G
Sbjct: 233 --DRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGD 290
Query: 312 -RTEKVLQVFNQMKRFNCAADTIG---YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
T K L ++ ++ +G +N LI+ + + +++ A++V +GV
Sbjct: 291 LETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVF-----RGVKDRD 345
Query: 368 -STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKK 426
ST+N++ +A LH G+ M+ +M+ L PN +T+ ++ + S +D K
Sbjct: 346 LSTWNTLIVGLA-LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFS 404
Query: 427 EM-DENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRK 485
M D +EPN+ Y ++ M G A+ VE ++PN V+ +L +
Sbjct: 405 LMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMF----VESMKIEPNAIVWRTLLGACKI 460
Query: 486 AGQLKMHEELVEKMVA 501
G +++ + EK+++
Sbjct: 461 YGNVELGKYANEKLLS 476
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 147/353 (41%), Gaps = 57/353 (16%)
Query: 161 FSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK 220
+S + Y + G EA+ F+ M D+VA +++++ + + + A+ FD
Sbjct: 181 WSSMTSGYAKRGKIDEAMRLFDEMP----YKDQVAWNVMITGCLKCKEMDSARELFD--- 233
Query: 221 DRF-EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQIT 279
RF E DV+ + ++I G+ G + A IFK+M+DAG P+V T ++ + G +
Sbjct: 234 -RFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLE 292
Query: 280 RAHDVFAEMIDAGCNPNAV-----TFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIG 334
+ +++ +++ +N+L+ ++ K G ++ ++VF +K D
Sbjct: 293 TGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVK----DRDLST 348
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMK 394
+N LI + E ++++ M + V PN TF + + V+ + ++ M+
Sbjct: 349 WNTLI-VGLALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMR 407
Query: 395 EL-NCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILIL-------- 445
++ N PN Y ++ M + ++ + M ++EPN +R L+
Sbjct: 408 DMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESM---KIEPNAIVWRTLLGACKIYGNV 464
Query: 446 --------------------------MFCEKGHWNNAYKLMKEMVEEKSLKPN 472
++ G W+ K+ K + + KP
Sbjct: 465 ELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPT 517
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 149/365 (40%), Gaps = 15/365 (4%)
Query: 105 QSLAFFNWATSLKN---FPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETF 161
++LAFF+W + + S Y L + + W ++D MKT G ++ +T+
Sbjct: 242 KALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTY 301
Query: 162 SVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD 221
+ R++ ++ + AE V + M D P S+++ L + F V
Sbjct: 302 IKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVF--RVSR 359
Query: 222 RFEP-----DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCG 276
++E +Y + G+ + AEEI K M++AG +P+ TYS ++ LC+
Sbjct: 360 KYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAK 419
Query: 277 QITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYN 336
++ A V +M GC P+ T+ L++ H K +K L F M D+ +
Sbjct: 420 RLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLD 479
Query: 337 FLIECHCRDENLEEAVKVLNLMVKKG-VAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKE 395
LI+ E A L MVK V P ST+ + + K+ A + MK+
Sbjct: 480 VLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKK 539
Query: 396 LNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNN 455
N ++ + F + L + D P+ Y +I F +G +
Sbjct: 540 QNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKD----SPSFAAYFHVIEAFYREGRLTD 595
Query: 456 AYKLM 460
A L+
Sbjct: 596 AKNLL 600
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/435 (18%), Positives = 165/435 (37%), Gaps = 40/435 (9%)
Query: 109 FFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRY 168
F +W S Y ML + + R W + MK G + +T+ +
Sbjct: 109 FLDWVLRDSGLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGEL 168
Query: 169 VRAGLAAEAV---HAFNRM-EDYGVAPDKVAVSIVVS----SLCRKRRAEE--------- 211
+ A+AV H + RM ++ ++ VS VV+ S +R +E
Sbjct: 169 SKEKSKADAVAVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNF 228
Query: 212 --------------AQSFFDSVKDR-----FEPDVILYTSLIHGWCRAGKIERAEEIFKD 252
A +FF V ++ + Y + + R + + +
Sbjct: 229 VIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDE 288
Query: 253 MKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGR 312
MK AG ++ TY V + + ++ M+D P+ + L+R ++
Sbjct: 289 MKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLR-YLSGSP 347
Query: 313 TEKVLQVFNQMKRFNCAADTIG---YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSST 369
+ VF +++ ++ Y+ + +EA ++ M G P++ T
Sbjct: 348 NPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNIT 407
Query: 370 FNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMD 429
++ + + K + A + +M+ C P+ T+ IL++ ++ +D L M
Sbjct: 408 YSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANML 467
Query: 430 ENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQL 489
E + + N +LI F + A + EMV+ ++KP Y+ +++ L K +
Sbjct: 468 EKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKS 527
Query: 490 KMHEELVEKMVARGF 504
+ +L++ M + +
Sbjct: 528 EEALDLLQMMKKQNY 542
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 149/349 (42%), Gaps = 56/349 (16%)
Query: 176 EAVHAFNRM-EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR------------ 222
EA+ FN+M D + PD A + +L + +E + ++ +
Sbjct: 273 EALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLTKNLRQKN 332
Query: 223 ----FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
EPD+++Y ++++ + + +F +++ G++PN TY + ++ + G+
Sbjct: 333 WDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKF 392
Query: 279 TRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFL 338
R HD F +M +G P A+T+ L+R + G+
Sbjct: 393 DRVHDFFRKMKSSGEAPKAITYKVLVRALWREGK-------------------------- 426
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKEL-N 397
+EEAV+ + M +KGV S + + C+ A +MK L N
Sbjct: 427 ---------IEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLEN 477
Query: 398 CLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAY 457
C P +T+ L+ +D + + + M +++ +PN+ T +++ ++ ++ A
Sbjct: 478 CRPLEITFTGLIAASLNGGHVDDCMAIFQYM-KDKCDPNIGTANMMLKVYGRNDMFSEAK 536
Query: 458 KLMKEMVEEKS--LKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
+L +E+V K L PN Y +LE ++ Q + E + + MV G+
Sbjct: 537 ELFEEIVSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGY 585
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 11/203 (5%)
Query: 127 IEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMED 186
+E++ +GK FD MK+ G A T+ VL+R R G EAV A ME
Sbjct: 383 MEVMLESGK---FDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQ 439
Query: 187 YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFE---PDVILYTSLIHGWCRAGKI 243
GV + LC R +A +K R E P I +T LI G +
Sbjct: 440 KGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMK-RLENCRPLEITFTGLIAASLNGGHV 498
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMI---DAGCNPNAVTF 300
+ IF+ MKD PN+ T ++++ R + A ++F E++ + PN T+
Sbjct: 499 DDCMAIFQYMKDK-CDPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTY 557
Query: 301 NSLMRVHVKAGRTEKVLQVFNQM 323
+ ++ ++ + E V+ M
Sbjct: 558 SFMLEASARSLQWEYFEHVYQTM 580
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 158/346 (45%), Gaps = 19/346 (5%)
Query: 164 LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRF 223
L+ Y++ +A F+ M+ D V+ + ++ + EE+ F D+F
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMD----VRDSVSYNTMICGYLKLEMVEESVRMFLENLDQF 303
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHD 283
+PD++ +S++ + A+ I+ M AG +I+ID +CG + A D
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
VF M C + V++NS++ ++++G + +++F M AD I Y LI
Sbjct: 364 VFNSM---ECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVST 419
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
R +L+ + + +K G+ + S N++ AK +V + ++++ M +T+
Sbjct: 420 RLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT----GDTV 475
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
T+N ++ L++ +M +++V P++ T+ + + M A +L KE+
Sbjct: 476 TWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLA----AKRLGKEI 531
Query: 464 ---VEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFVS 506
+ + LQ+ ++E+ K G L+ + E+M R V+
Sbjct: 532 HCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVT 577
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 166/409 (40%), Gaps = 53/409 (12%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
+L G LR LA ++ + M G + + ++LI Y + G A FN ME
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME--- 369
Query: 189 VAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFE-PDVILYTSLIHGWCRAGKIERAE 247
D V+ + ++S + EA F + E D I Y LI R ++ +
Sbjct: 370 -CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 428
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
+ + +GI ++ + +ID +CG++ + +F+ M + VT+N+++
Sbjct: 429 GLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSM----GTGDTVTWNTVISAC 484
Query: 308 VKAGRTEKVLQVFNQM----------------------------KRFNCAADTIGY---- 335
V+ G LQV QM K +C GY
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESEL 544
Query: 336 ---NFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAK 392
N LIE + + LE + +V M ++ V T+ + + A +A
Sbjct: 545 QIGNALIEMYSKCGCLENSSRVFERMSRRDVV----TWTGMIYAYGMYGEGEKALETFAD 600
Query: 393 MKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDEN-QVEPNVNTYRILILMFCEKG 451
M++ +P+++ + ++ + S +D L ++M + +++P + Y ++ +
Sbjct: 601 MEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQ 660
Query: 452 HWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMV 500
+ A +E ++ +KP+ ++ +VL R +G ++ E + +++
Sbjct: 661 KISKA----EEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRII 705
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 144/333 (43%), Gaps = 41/333 (12%)
Query: 164 LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR- 222
+IR + + GL EA+ + ++ + V+PDK V+ + AE ++ + D
Sbjct: 77 IIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG 136
Query: 223 FEPDVIL-------------------------------YTSLIHGWCRAGKIERAEEIFK 251
FE D+ + + SLI G+ G E A EI+
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYH 196
Query: 252 DMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAG 311
++K++ I P+ T S V+ + + + + + +G N V N L+ +++K
Sbjct: 197 ELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFR 256
Query: 312 RTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFN 371
R +VF++M D++ YN +I + + E +EE+V++ L P+ T +
Sbjct: 257 RPTDARRVFDEMD----VRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPDLLTVS 311
Query: 372 SIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDEN 431
S+ L D++ A +Y M + + + NIL+ ++A K DM+ +++ +
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYA--KCGDMI--TARDVFNS 367
Query: 432 QVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
+ ++ +I + + G A KL K M+
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 126/290 (43%), Gaps = 12/290 (4%)
Query: 218 SVKDRFEP--DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRC 275
SV R P +V L+ S+I + + G A E + ++++ + P+ +T+ VI +
Sbjct: 60 SVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGL 119
Query: 276 GQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGY 335
V+ +++D G + N+L+ ++ + G + QVF++M D + +
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMP----VRDLVSW 175
Query: 336 NFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKE 395
N LI + EEA+++ + + + P+S T +S+ L V ++ +
Sbjct: 176 NSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK 235
Query: 396 LNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNN 455
+ N L+ M+ + + ++ EMD V +V +Y +I + +
Sbjct: 236 SGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMD---VRDSV-SYNTMICGYLKLEMVEE 291
Query: 456 AYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
+ ++ E +++ KP+L +VL L + + + M+ GFV
Sbjct: 292 SVRMFLENLDQ--FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFV 339
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 163/388 (42%), Gaps = 49/388 (12%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLC 204
L D M R V T++ +I Y +AG + F RM G V+ C
Sbjct: 230 LFDRMTERNVI----TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKAC 285
Query: 205 RK--RRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNV 262
R R E +Q + E D+ L SL+ + + G + A+ +F MK+ K +V
Sbjct: 286 RDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN---KDSV 342
Query: 263 HTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQ 322
+++ +I L + QI+ A+++F +M + V++ +++ G K +++F
Sbjct: 343 -SWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKCVELFGM 397
Query: 323 MKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHD 382
M D I + +I + EEA+ + M++K V PNS TF+S+ A L D
Sbjct: 398 MPE----KDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLAD 453
Query: 383 V----------------------NGAHRMYAKMKELN-------CL--PNTLTYNILMRM 411
+ N MY K N C+ PN ++YN ++
Sbjct: 454 LIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISG 513
Query: 412 FAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKP 471
++ + LKL ++ + EPN T+ L+ G+ + +K K M +++P
Sbjct: 514 YSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEP 573
Query: 472 NLQVYENVLELLRKAGQLKMHEELVEKM 499
Y +++LL ++G L L+ M
Sbjct: 574 GPDHYACMVDLLGRSGLLDDASNLISTM 601
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 145/327 (44%), Gaps = 23/327 (7%)
Query: 155 EITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQS 214
E A +++ +I +VRAG EA F E D VA ++++S R + EA
Sbjct: 141 EKNAVSYATMITGFVRAGRFDEA--EFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVR 198
Query: 215 FFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCR 274
F + + +V+ +S++HG+C+ G+I A +F M + NV T++ +ID +
Sbjct: 199 VFQGMAVK---EVVSCSSMVHGYCKMGRIVDARSLFDRMTE----RNVITWTAMIDGYFK 251
Query: 275 CGQITRAHDVFAEMIDAG-CNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTI 333
G +F M G N+ T + + R + Q+ + R D
Sbjct: 252 AGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLF 311
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM 393
N L+ + + + EA V +M K +S ++NS+ + + ++ A+ ++ KM
Sbjct: 312 LGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQISEAYELFEKM 367
Query: 394 KELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHW 453
+ +++ +++ F+ I ++L M E + N+ T+ +I F G++
Sbjct: 368 PG----KDMVSWTDMIKGFSGKGEISKCVELFGMMPE---KDNI-TWTAMISAFVSNGYY 419
Query: 454 NNAYKLMKEMVEEKSLKPNLQVYENVL 480
A +M+ +K + PN + +VL
Sbjct: 420 EEALCWFHKML-QKEVCPNSYTFSSVL 445
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 112/245 (45%), Gaps = 21/245 (8%)
Query: 200 VSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIK 259
+S R +EA++ F + +R ++ + ++I + GK+ +A ++F +M
Sbjct: 57 ISKHARNGNLQEAEAIFRQMSNR---SIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 260 PNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQV 319
+ +I + C G +A+++F ++ + NAV++ +++ V+AGR ++ +
Sbjct: 114 SYNAMITAMIKNKCDLG---KAYELFCDIPE----KNAVSYATMITGFVRAGRFDEAEFL 166
Query: 320 FNQMK-RFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
+ + +F D++ N L+ + R EAV+V M K V SS +
Sbjct: 167 YAETPVKFR---DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHG----YC 219
Query: 379 KLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVN 438
K+ + A ++ +M E N + T + + + L++++E D V+ N N
Sbjct: 220 KMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD---VKVNSN 276
Query: 439 TYRIL 443
T ++
Sbjct: 277 TLAVM 281
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 154/334 (46%), Gaps = 33/334 (9%)
Query: 155 EITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVS--IVVSSLCRKRRAEEA 212
E A +++++I Y + G A F+ M P K S I++ R + A
Sbjct: 198 EKDAVSWNLIISSYAKKGDMGNACSLFSAM------PLKSPASWNILIGGYVNCREMKLA 251
Query: 213 QSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSL 272
+++FD++ + + + + ++I G+ + G ++ AEE+F+ M K + Y +I
Sbjct: 252 RTYFDAMPQK---NGVSWITMISGYTKLGDVQSAEELFRLMS----KKDKLVYDAMIACY 304
Query: 273 CRCGQITRAHDVFAEMID--AGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAA 330
+ G+ A +FA+M++ + P+ +T +S++ + + G T V + +
Sbjct: 305 TQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKI 364
Query: 331 DTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNG----A 386
D + LI+ + + + +A K+ + + KK S+ I GC +NG A
Sbjct: 365 DDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAM---IMGC-----GINGMATEA 416
Query: 387 HRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILM 446
+ ++ M E PN +T+ L+ ++ S + K M ++ +EP+ + Y I++ M
Sbjct: 417 NSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDM 476
Query: 447 FCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVL 480
G AY+L+K M ++PN V+ +L
Sbjct: 477 LGRAGRLEEAYELIKSM----PMQPNAGVWGALL 506
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 181 FNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFE-PDVILYTSLIHGWCR 239
F +M++ G+ P+ VA+ + LC+ +EA F ++D+ P+V++YT+++ +C+
Sbjct: 122 FKKMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCK 178
Query: 240 AGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVT 299
A KIE A+ IF+ M++ GI PN +Y +++ L C + A +EM+++G +PN T
Sbjct: 179 AHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPT 238
Query: 300 FNSLM 304
F L+
Sbjct: 239 FVELV 243
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
E ++EIFK MK+ G+ PN ++D LC+ G + A +F M D G P V + ++
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
+ KA + E ++F +M+ A + Y L++ L++AV + M++ G
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 364 APNSSTFNSIFGCIAKLHDVNGAH 387
+PN TF + + ++ V A
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQ 256
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 70/135 (51%)
Query: 232 SLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDA 291
+++ G C+ G ++ A ++F M+D G P V Y+ V+++ C+ +I A +F +M +
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 292 GCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEA 351
G PNA ++ L++ + + ++M + + + L++ CR + +E+A
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQA 255
Query: 352 VKVLNLMVKKGVAPN 366
++ + +KG A N
Sbjct: 256 QSAIDTLNQKGFAVN 270
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
Query: 318 QVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCI 377
++F +MK + + +++ C+D ++EA+K+ LM KG P + ++
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 378 AKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNV 437
K H + A R++ KM+ PN +Y +L++ +D + EM E+ PNV
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 438 NTYRILILMFC 448
T+ L+ C
Sbjct: 237 PTFVELVDALC 247
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 170 RAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVI 228
+ GL EA+ F M D G P+ V + VV + C+ + E+A+ F +++ P+
Sbjct: 143 KDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAF 202
Query: 229 LYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM 288
Y L+ G ++ A +M ++G PNV T+ ++D+LCR + +A +
Sbjct: 203 SYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTL 262
Query: 289 IDAG 292
G
Sbjct: 263 NQKG 266
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 181 FNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFE-PDVILYTSLIHGWCR 239
F +M++ G+ P+ VA+ + LC+ +EA F ++D+ P+V++YT+++ +C+
Sbjct: 122 FKKMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCK 178
Query: 240 AGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVT 299
A KIE A+ IF+ M++ GI PN +Y +++ L C + A +EM+++G +PN T
Sbjct: 179 AHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPT 238
Query: 300 FNSLM 304
F L+
Sbjct: 239 FVELV 243
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
E ++EIFK MK+ G+ PN ++D LC+ G + A +F M D G P V + ++
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
+ KA + E ++F +M+ A + Y L++ L++AV + M++ G
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 364 APNSSTFNSIFGCIAKLHDVNGAH 387
+PN TF + + ++ V A
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQ 256
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 70/135 (51%)
Query: 232 SLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDA 291
+++ G C+ G ++ A ++F M+D G P V Y+ V+++ C+ +I A +F +M +
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 292 GCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEA 351
G PNA ++ L++ + + ++M + + + L++ CR + +E+A
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQA 255
Query: 352 VKVLNLMVKKGVAPN 366
++ + +KG A N
Sbjct: 256 QSAIDTLNQKGFAVN 270
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
Query: 318 QVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCI 377
++F +MK + + +++ C+D ++EA+K+ LM KG P + ++
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 378 AKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNV 437
K H + A R++ KM+ PN +Y +L++ +D + EM E+ PNV
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 438 NTYRILILMFC 448
T+ L+ C
Sbjct: 237 PTFVELVDALC 247
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 170 RAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVI 228
+ GL EA+ F M D G P+ V + VV + C+ + E+A+ F +++ P+
Sbjct: 143 KDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAF 202
Query: 229 LYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM 288
Y L+ G ++ A +M ++G PNV T+ ++D+LCR + +A +
Sbjct: 203 SYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTL 262
Query: 289 IDAG 292
G
Sbjct: 263 NQKG 266
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 162/349 (46%), Gaps = 39/349 (11%)
Query: 114 TSLKNFPSSPE----PYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYV 169
++L+ F +P+ Y ++D K R A L DSM R + +++ LI Y
Sbjct: 170 SALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLV----SWNSLISGYA 225
Query: 170 RAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVI 228
+ EA+ F+ M G+ PD VA+ +S+ + ++ ++ D K R D
Sbjct: 226 QMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSF 285
Query: 229 LYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM 288
L T L+ + + G I+ A EIF+ D + T++ +I L G D F +M
Sbjct: 286 LATGLVDFYAKCGFIDTAMEIFELCSD----KTLFTWNAMITGLAMHGNGELTVDYFRKM 341
Query: 289 IDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQ----------MKRFNCAADTIGYNFL 338
+ +G P+ VTF S++ +G ++ +F+Q MK + C AD +G L
Sbjct: 342 VSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGL 401
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA--KLH-DVNGAHRMYAKMKE 395
I EEA +++ M K G N + G + ++H ++ A + ++K
Sbjct: 402 I---------EEAAEMIEQMPKDG--GNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKA 450
Query: 396 LNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMD-ENQVEPNVNTYRIL 443
L+ + Y +++ M+A ++ + V+K+++ +D + +V+ NV ++L
Sbjct: 451 LSP-EDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKVL 498
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 127/281 (45%), Gaps = 18/281 (6%)
Query: 226 DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVF 285
D+ +LI + I+ A ++F D + +V TY+++ID L + +I RA ++F
Sbjct: 151 DLFTLNTLIRVYSLIAPIDSALQLF----DENPQRDVVTYNVLIDGLVKAREIVRARELF 206
Query: 286 AEMIDAGCNP--NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
M P + V++NSL+ + + + +++F++M D + +
Sbjct: 207 DSM------PLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACA 260
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
+ + ++ + + +K + +S + AK ++ A ++ EL
Sbjct: 261 QSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIF----ELCSDKTLF 316
Query: 404 TYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCE-KGHWNNAYKLMKE 462
T+N ++ A + ++ + ++M + ++P+ T+ I +L+ C G + A L +
Sbjct: 317 TWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTF-ISVLVGCSHSGLVDEARNLFDQ 375
Query: 463 MVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
M + ++ Y + +LL +AG ++ E++E+M G
Sbjct: 376 MRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDG 416
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 133/294 (45%), Gaps = 15/294 (5%)
Query: 118 NFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEA 177
NF S + + KL + A L D E + +++ +I Y + GL +A
Sbjct: 349 NFLSHASVSTALTTVYSKLNEIESARKLFD----ESPEKSLPSWNAMISGYTQNGLTEDA 404
Query: 178 VHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHG 236
+ F M+ +P+ V ++ ++S+ + + D V+ FE + + T+LI
Sbjct: 405 ISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGM 464
Query: 237 WCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPN 296
+ + G I A +F D K N T++ +I GQ A ++F EM+++G P
Sbjct: 465 YAKCGSIAEARRLF----DLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPT 520
Query: 297 AVTFNSLMRVHVKAGRTEKVLQVFNQM-KRFNCAADTIGYNFLIECHCRDENLEEAVKVL 355
VTF ++ AG ++ ++FN M R+ Y +++ R +L+ A++ +
Sbjct: 521 PVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFI 580
Query: 356 NLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILM 409
M + P SS + ++ G D N A + K+ EL+ P+ + Y++L+
Sbjct: 581 EAM---SIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELD--PDNVGYHVLL 629
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 118/260 (45%), Gaps = 23/260 (8%)
Query: 212 AQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM-KDAGIKPNVHTYSIVID 270
A+ F SV+ PDV L+ L+ G+ + +F + K +KPN TY+ I
Sbjct: 71 ARDIFLSVQ---RPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAIS 127
Query: 271 SLC-----RCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR 325
+ R G++ + + + GC+ + +++++++ K R E +VF++M
Sbjct: 128 AASGFRDDRAGRV-----IHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE 182
Query: 326 FNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAP-NSSTFNSIFGCIAKLHDVN 384
DTI +N +I + ++E E+++V ++ + +++T I +A+L ++
Sbjct: 183 ----KDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELR 238
Query: 385 GAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILI 444
++++ + C + + ++++ I M L +E +P++ Y +I
Sbjct: 239 LGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR----KPDIVAYNAMI 294
Query: 445 LMFCEKGHWNNAYKLMKEMV 464
+ G + L KE++
Sbjct: 295 HGYTSNGETELSLSLFKELM 314
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/307 (18%), Positives = 125/307 (40%), Gaps = 38/307 (12%)
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHD 283
+PD++ Y ++IHG+ G+ E + +FK++ +G + T ++ + G + +
Sbjct: 284 KPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST---LVSLVPVSGHLMLIYA 340
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
+ + + +A +L V+ K E ++F++ + + +N +I +
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS----WNAMISGYT 396
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKL---------HDV----------- 383
++ E+A+ + M K +PN T I A+L HD+
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIY 456
Query: 384 --NGAHRMYAK---------MKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQ 432
MYAK + +L N +T+N ++ + L + EM +
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG 516
Query: 433 VEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMH 492
+ P T+ ++ G ++ M+ +P+++ Y ++++L +AG L+
Sbjct: 517 ITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRA 576
Query: 493 EELVEKM 499
+ +E M
Sbjct: 577 LQFIEAM 583
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 249 IFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHV 308
+FK M+++ + + Y+I+I LC+ G+ A ++F ++ +G P+ T+N ++R
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFS- 59
Query: 309 KAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSS 368
GR EK ++ +M R DTI YN +I C+ L +A K V+ + S
Sbjct: 60 SLGRAEK---LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCS 107
Query: 369 TFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEM 428
TFN++ K V ++ +M + N +TY L+ F + + L + +EM
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 429 DENQVEPNVNTYRILILMFCEKGHWNNAYKLM 460
N V + T+R ++ C + A ++
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 109/214 (50%), Gaps = 18/214 (8%)
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHD 283
+ D Y +IHG C+AGK + A IF ++ +G++P+V TY+++I R + RA
Sbjct: 11 DMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEK 66
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
++AEMI G P+ +T+NS++ K + + +V FN LI +C
Sbjct: 67 LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNT---------LINGYC 117
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
+ +++ + + M ++G+ N T+ ++ ++ D N A ++ +M +++
Sbjct: 118 KATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSI 177
Query: 404 TY-NILMRMFAES---KSIDMVLKLKKEMDENQV 433
T+ +IL ++ + K++ M+L+ K M N V
Sbjct: 178 TFRDILPQLCSRKELRKAVAMLLQ-KSSMVSNNV 210
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 14/195 (7%)
Query: 181 FNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCR 239
F M + + D +I++ LC+ + +EA + F ++ +PDV Y +I R
Sbjct: 2 FKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----R 57
Query: 240 AGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVT 299
+ RAE+++ +M G+ P+ TY+ +I LC+ ++ +A V + + T
Sbjct: 58 FSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCST 108
Query: 300 FNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMV 359
FN+L+ + KA R + + +F +M R A+ I Y LI + + A+ + MV
Sbjct: 109 FNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168
Query: 360 KKGVAPNSSTFNSIF 374
GV +S TF I
Sbjct: 169 SNGVYSSSITFRDIL 183
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 133 AGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPD 192
AGK FD A ++ ++ G++ +T++++IR + G AE ++A M G+ PD
Sbjct: 27 AGK---FDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLG-RAEKLYA--EMIRRGLVPD 79
Query: 193 KVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKD 252
+ + ++ LC++ + +A+ S + +LI+G+C+A +++ +F +
Sbjct: 80 TITYNSMIHGLCKQNKLAQARKVSKSCST--------FNTLINGYCKATRVKDGMNLFCE 131
Query: 253 MKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
M GI NV TY+ +I + G A D+F EM+ G +++TF ++
Sbjct: 132 MYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDIL 183
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 104/224 (46%), Gaps = 18/224 (8%)
Query: 149 MKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVV--SSLCRK 206
M+ +++ ++++I +AG EA + F + G+ PD ++++ SSL R
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRA 64
Query: 207 RRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYS 266
+ + + ++ PD I Y S+IHG C+ K+ +A ++ K + T++
Sbjct: 65 EKL-----YAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCSTFN 110
Query: 267 IVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRF 326
+I+ C+ ++ ++F EM G N +T+ +L+ + G L +F +M
Sbjct: 111 TLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSN 170
Query: 327 NCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTF 370
+ +I + ++ C + L +AV + L+ K + N+ T
Sbjct: 171 GVYSSSITFRDILPQLCSRKELRKAVAM--LLQKSSMVSNNVTL 212
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 30/173 (17%)
Query: 319 VFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIA 378
+F M+ N DT GYN +I C+ +EA + ++ G+ P+ T+N +
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 379 KLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKK------------ 426
+ + A ++YA+M +P+T+TYN ++ + + K+ K
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGY 116
Query: 427 --------------EMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVE 465
EM + NV TY LI F + G +N A + +EMV
Sbjct: 117 CKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVS 169
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/375 (19%), Positives = 152/375 (40%), Gaps = 79/375 (21%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRA---------- 209
T++ LI Y + +A+ FN+M +G +P++ +S V+ + +RR
Sbjct: 128 TWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFC 187
Query: 210 -------------------------EEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIE 244
++AQ FD+++ R + + + +LI G R E
Sbjct: 188 VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND---VSWNALIAGHARRSGTE 244
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLM 304
+A E+F+ M G +P+ +Y+ + + G + + V A MI +G A N+L+
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304
Query: 305 RVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVA 364
++ K+G ++F+++ + D + +N L+ + + +EAV M + G+
Sbjct: 305 DMYAKSGSIHDARKIFDRLAK----RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 365 PNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKL 424
PN +F S+ + ++ Y MK+ +P Y ++ + + ++ L+
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRF 420
Query: 425 KKEMDENQVEPNVNTYR----------------------------------ILILMFCEK 450
+EM +EP ++ IL ++
Sbjct: 421 IEEM---PIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 451 GHWNNAYKLMKEMVE 465
G WN+A ++ K+M E
Sbjct: 478 GRWNDAARVRKKMKE 492
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 149/337 (44%), Gaps = 51/337 (15%)
Query: 164 LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRF 223
L+ Y +GL A A N + D + +I+++ + E A++ F+ VK
Sbjct: 345 LVHMYASSGLIASAQSLLNE------SFDLQSCNIIINRYLKNGDLERAETLFERVKSLH 398
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHD 283
D + +TS+I G+ AG + RA +F+ + D K V T++++I L + A
Sbjct: 399 --DKVSWTSMIDGYLEAGDVSRAFGLFQKLHD---KDGV-TWTVMISGLVQNELFAEAAS 452
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCA-ADTIGYNFLIECH 342
+ ++M+ G P T++ L+ AG T + +Q K +C A T
Sbjct: 453 LLSDMVRCGLKPLNSTYSVLLS---SAGATSNL----DQGKHIHCVIAKTTA-------- 497
Query: 343 CRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
C D P+ NS+ AK + A+ ++AKM + +T
Sbjct: 498 CYD-------------------PDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ----KDT 534
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
+++N ++ + D L L KEM ++ +PN T+ ++ G +L K
Sbjct: 535 VSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKA 594
Query: 463 MVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
M E S++P + Y ++++LL +AG+LK EE + +
Sbjct: 595 MKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISAL 631
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 165/352 (46%), Gaps = 49/352 (13%)
Query: 162 SVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD 221
++++RR GL A H +++ G V + ++S + +EA+ F+ + +
Sbjct: 47 ALILRRLSEGGLV-HARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPE 105
Query: 222 RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRA 281
R +++ +++ G+ + ++ A +F++M NV ++++++ +LC G+ A
Sbjct: 106 R---NIVTCNAMLTGYVKCRRMNEAWTLFREMP-----KNVVSWTVMLTALCDDGRSEDA 157
Query: 282 HDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIEC 341
++F EM + N V++N+L+ ++ G EK QVF+ M + D + +N +I+
Sbjct: 158 VELFDEMPE----RNVVSWNTLVTGLIRNGDMEKAKQVFDAMP----SRDVVSWNAMIKG 209
Query: 342 HCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPN 401
+ ++ +EEA + M +K V T+ S+ + DV A+R++ +M E N +
Sbjct: 210 YIENDGMEEAKLLFGDMSEKNVV----TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSW 265
Query: 402 T-----LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNA 456
T +N L R +++ + L++KK++D V PN T L A
Sbjct: 266 TAMISGFAWNELYR-----EALMLFLEMKKDVD--AVSPNGETLISL------------A 306
Query: 457 YKLMKEMVEEKSLKPNL--QVYENVLELLRKAGQLKMHEELVEKMVARGFVS 506
Y VE + L L QV N E + G+L + LV + G ++
Sbjct: 307 YACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLA--KSLVHMYASSGLIA 356
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 105/240 (43%), Gaps = 14/240 (5%)
Query: 159 ETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS 218
++ +++I RY++ G A F R++ DKV+ + ++ A F
Sbjct: 369 QSCNIIINRYLKNGDLERAETLFERVKSL---HDKVSWTSMIDGYLEAGDVSRAFGLFQK 425
Query: 219 VKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQI 278
+ D+ D + +T +I G + A + DM G+KP TYS+++ S +
Sbjct: 426 LHDK---DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNL 482
Query: 279 TRA---HDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGY 335
+ H V A+ A +P+ + NSL+ ++ K G E ++F +M + DT+ +
Sbjct: 483 DQGKHIHCVIAKTT-ACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ----KDTVSW 537
Query: 336 NFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKE 395
N +I ++A+ + M+ G PNS TF + + + ++ MKE
Sbjct: 538 NSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKE 597
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 46/233 (19%)
Query: 118 NFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEA 177
++ S + Y+E D++ R F L L D GV T++V+I V+ L AEA
Sbjct: 402 SWTSMIDGYLEAGDVS---RAFGLFQKLHDK---DGV-----TWTVMISGLVQNELFAEA 450
Query: 178 VHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR---FEPDVILYTSLI 234
+ M G+ P S+++SS ++ + + ++PD+IL SL+
Sbjct: 451 ASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLV 510
Query: 235 HGWCRAGKIERAEEIF-------------------------------KDMKDAGIKPNVH 263
+ + G IE A EIF K+M D+G KPN
Sbjct: 511 SMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSV 570
Query: 264 TYSIVIDSLCRCGQITRAHDVFAEMIDA-GCNPNAVTFNSLMRVHVKAGRTEK 315
T+ V+ + G ITR ++F M + P + S++ + +AG+ ++
Sbjct: 571 TFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKE 623
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 131/295 (44%), Gaps = 21/295 (7%)
Query: 229 LYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM 288
++ LI + +I+ A + + ++ GI + T + +I + R + + ++ E+
Sbjct: 164 VFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREV 223
Query: 289 ID-------------AGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR-FNCAADTIG 334
PNA TFNS+M + G TE V +++ +M+ C+ +
Sbjct: 224 FGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYS 283
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM- 393
YN L+E +C + EA KV M +GV + +N++ G + +V A ++ M
Sbjct: 284 YNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMG 343
Query: 394 -KELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGH 452
K + C LTY L+ + ++ +D L + +EM E + T L+ C+
Sbjct: 344 LKGIEC--TCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRD 401
Query: 453 WN---NAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGF 504
A ++K+ V E P+ YE +++ L + G++ + +MV +GF
Sbjct: 402 GQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGF 456
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 6/229 (2%)
Query: 258 IKPNVHTYSIVIDSLCRCGQITRAHDVFAEMID-AGCNPNAVTFNSLMRVHVKAGRTEKV 316
IKPN T++ ++ S R G+ ++ EM + GC+PN ++N LM + G +
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 317 LQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGC 376
+V+ +MK D + YN +I C + + +A ++ M KG+ T+ +
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 377 IAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLK----LKKEMDENQ 432
K DV+ +Y +MK + LT L+ + + V++ +K + E
Sbjct: 361 YCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAM 420
Query: 433 VEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
P+ N Y +L+ CE G + A + EMV K KP+ + Y ++
Sbjct: 421 FYPSRNCYELLVKRLCEDGKMDRALNIQAEMV-GKGFKPSQETYRAFID 468
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 143/349 (40%), Gaps = 46/349 (13%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNR---MEDYGV---- 189
+ D A ++ +++RG+ T + LI R A+ + ++D V
Sbjct: 176 KEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAK 235
Query: 190 ------APDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRF--EPDVILYTSLIHGWCRAG 241
P+ + ++ S R+ E + + +++ P+V Y L+ +C G
Sbjct: 236 KMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARG 295
Query: 242 KIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFN 301
+ AE+++++MK G+ ++ Y+ +I LC ++ +A ++F +M G +T+
Sbjct: 296 LMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYE 355
Query: 302 SLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKK 361
L+ + KAG + L V+ +MKR AD + L+E C D + + V+ ++ VK
Sbjct: 356 HLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADI-VKD 414
Query: 362 GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMV 421
V +E P+ Y +L++ E +D
Sbjct: 415 AV------------------------------REAMFYPSRNCYELLVKRLCEDGKMDRA 444
Query: 422 LKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLK 470
L ++ EM +P+ TYR I + G + L EM E L+
Sbjct: 445 LNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEMAESLKLR 493
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
Query: 132 LAGKLRHFDL--AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGV 189
+ G +F++ A L M +G+E T T+ L+ Y +AG + + M+ G
Sbjct: 323 IGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGF 382
Query: 190 APDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-----FEPDVILYTSLIHGWCRAGKIE 244
D + + +V LC R + D VKD F P Y L+ C GK++
Sbjct: 383 EADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMD 442
Query: 245 RAEEIFKDMKDAGIKPNVHTYSIVIDS 271
RA I +M G KP+ TY ID
Sbjct: 443 RALNIQAEMVGKGFKPSQETYRAFIDG 469
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 89/194 (45%), Gaps = 24/194 (12%)
Query: 314 EKVLQVFNQM-KRFN-CAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFN 371
++VL+VF + K +N C + ++ LI+ + ++ AV V+ + +G+ ST N
Sbjct: 142 DRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCN 201
Query: 372 SIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDEN 431
++ +++ + ++MY ++ L+ S+D K+
Sbjct: 202 ALITEVSRRRGASNGYKMYREVFGLD-----------------DVSVDEAKKMI-----G 239
Query: 432 QVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKM 491
+++PN T+ +++ F +G ++ +EM EE PN+ Y ++E G +
Sbjct: 240 KIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSE 299
Query: 492 HEELVEKMVARGFV 505
E++ E+M RG V
Sbjct: 300 AEKVWEEMKVRGVV 313
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 175/429 (40%), Gaps = 14/429 (3%)
Query: 80 HPISPSTARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHF 139
H ISPS RVI+ H + +L FFNWA + Y + R F
Sbjct: 43 HSISPSLVARVIDPFLLNHHSL----ALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQF 98
Query: 140 DLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSI- 198
L +K+ + + + + LI V L +A AF +E+ ++ +
Sbjct: 99 SAMDALFKQVKSNKILLDSSVYRSLIDTLV---LGRKAQSAFWVLEEAFSTGQEIHPDVC 155
Query: 199 --VVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGW-CRAGKIERAEEIFKDMKD 255
+++ L + AQ F ++ + L + GW CR+ + + + ++K
Sbjct: 156 NRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKK 215
Query: 256 AGIKPNVHTYSIVI-DSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTE 314
A + N +++I SLC+C + A + E+ + C P+ + + + V G
Sbjct: 216 ANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLY 275
Query: 315 KVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIF 374
+ V + ++ A + Y I + L EA +V ++V ++ +++
Sbjct: 276 ERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALI 335
Query: 375 GCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVE 434
G ++ + D + A M LP T + L + D ++K + +
Sbjct: 336 GSVSAV-DPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYF 394
Query: 435 PNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEE 494
+ +Y ++I C+ G +Y ++EM +E L P++ +Y ++E KA ++ ++
Sbjct: 395 SELQSYSLMISFLCKAGRVRESYTALQEMKKE-GLAPDVSLYNALIEACCKAEMIRPAKK 453
Query: 495 LVEKMVARG 503
L ++M G
Sbjct: 454 LWDEMFVEG 462
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/363 (18%), Positives = 149/363 (41%), Gaps = 36/363 (9%)
Query: 139 FDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSI 198
+D A L M+ +GV + F V I + R+ + + + ++ + + +++
Sbjct: 168 YDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIAL 227
Query: 199 VV-SSLCRKRRAEEAQSFFDSVKD-RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDA 256
++ SLC+ R +A + +++ +PD + Y + + G + + + K +
Sbjct: 228 LILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKL 287
Query: 257 GIKPNVHTYSIVIDSLCRCGQITRAHDV-------------------------------- 284
G+ P Y I L ++T A +V
Sbjct: 288 GVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAV 347
Query: 285 --FAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
M+ G P T + L + + +++ +++ + + ++ Y+ +I
Sbjct: 348 EFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFL 407
Query: 343 CRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
C+ + E+ L M K+G+AP+ S +N++ K + A +++ +M C N
Sbjct: 408 CKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNL 467
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
TYN+L+R +E + L+L +M E +EP+ Y LI C++ A ++ ++
Sbjct: 468 TTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRK 527
Query: 463 MVE 465
+E
Sbjct: 528 CME 530
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 121/250 (48%), Gaps = 7/250 (2%)
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIH 235
AV M G P +S + +LCR +++ ++ + + + ++ Y+ +I
Sbjct: 346 AVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMIS 405
Query: 236 GWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNP 295
C+AG++ + ++MK G+ P+V Y+ +I++ C+ I A ++ EM GC
Sbjct: 406 FLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKM 465
Query: 296 NAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVL 355
N T+N L+R + G E+ L++F++M D Y LIE C++ +E A++V
Sbjct: 466 NLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVF 525
Query: 356 NLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAK--MKELNCLPNTLTYNILMRMFA 413
+++ + S F L+ + H A ++E L +T + +L++ A
Sbjct: 526 RKCMERDHKTVTRRVLSEF----VLNLCSNGHSGEASQLLREREHLEHTGAHVVLLKCVA 581
Query: 414 ESKSIDMVLK 423
++K +++ ++
Sbjct: 582 DAKEVEIGIR 591
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 99 HGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITA 158
H I Y+ L+ + + L+++ I L AG++R ++ + MK G+
Sbjct: 380 HLIKAYELLSSKGYFSELQSYS----LMISFLCKAGRVRE---SYTALQEMKKEGLAPDV 432
Query: 159 ETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS 218
++ LI +A + A ++ M G + ++++ L + AEE+ FD
Sbjct: 433 SLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDK 492
Query: 219 VKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFK 251
+ +R EPD +Y SLI G C+ KIE A E+F+
Sbjct: 493 MLERGIEPDETIYMSLIEGLCKETKIEAAMEVFR 526
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVS 201
A L D M G ++ T++VLIR+ G A E++ F++M + G+ PD+ ++
Sbjct: 451 AKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIE 510
Query: 202 SLCRKRRAEEAQSFFDSVKDRFEPDVI--LYTSLIHGWCRAGKIERAEEIFKD 252
LC++ + E A F +R V + + + C G A ++ ++
Sbjct: 511 GLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 133/313 (42%), Gaps = 43/313 (13%)
Query: 152 RGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAV--------------- 196
RG+E + +++ +I+ + GLA EA+ F M+ G+ D+
Sbjct: 229 RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINE 288
Query: 197 --------------------SIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHG 236
S ++ C+ + A++ FD +K + +V+ +T+++ G
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK---NVVSWTAMVVG 345
Query: 237 WCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPN 296
+ + G+ E A +IF DM+ +GI P+ +T I + + + I +G
Sbjct: 346 YGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHY 405
Query: 297 AVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLN 356
NSL+ ++ K G + ++FN+M D + + ++ + + E +++ +
Sbjct: 406 VTVSNSLVTLYGKCGDIDDSTRLFNEMN----VRDAVSWTAMVSAYAQFGRAVETIQLFD 461
Query: 357 LMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM-KELNCLPNTLTYNILMRMFAES 415
MV+ G+ P+ T + ++ V R + M E +P+ Y+ ++ +F+ S
Sbjct: 462 KMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRS 521
Query: 416 KSIDMVLKLKKEM 428
++ ++ M
Sbjct: 522 GRLEEAMRFINGM 534
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/408 (18%), Positives = 160/408 (39%), Gaps = 51/408 (12%)
Query: 127 IEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMED 186
+ ML L+ H L + + G E S L+ Y G ++A F ++D
Sbjct: 143 MTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD 202
Query: 187 YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERA 246
+ V + ++ L E+A F + E D + + ++I G + G + A
Sbjct: 203 ----RNTVMYNSLMGGLLACGMIEDALQLFRGM----EKDSVSWAAMIKGLAQNGLAKEA 254
Query: 247 EEIFKDMKDAGIK-----------------------------------PNVHTYSIVIDS 271
E F++MK G+K +++ S +ID
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314
Query: 272 LCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
C+C + A VF M N V++ +++ + + GR E+ +++F M+R D
Sbjct: 315 YCKCKCLHYAKTVFDRMK----QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA 391
I +LEE + + G+ + NS+ K D++ + R++
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN 430
Query: 392 KMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
+M + + +++ ++ +A+ ++L +M ++ ++P+ T +I G
Sbjct: 431 EMN----VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 452 HWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
+ K M E + P++ Y +++L ++G+L+ + M
Sbjct: 487 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM 534
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/408 (18%), Positives = 152/408 (37%), Gaps = 78/408 (19%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNR-MEDYGVAPDKVAVSIVVS--------SLCRKRRAE 210
T++VLI Y +GL AV A+N M D+ +V + ++ SL ++ +
Sbjct: 105 TWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQ 164
Query: 211 ---------------------------EAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKI 243
+A+ F + DR + ++Y SL+ G G I
Sbjct: 165 VIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR---NTVMYNSLMGGLLACGMI 221
Query: 244 E------------------------------RAEEIFKDMKDAGIKPNVHTYSIVIDSLC 273
E A E F++MK G+K + + + V+ +
Sbjct: 222 EDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACG 281
Query: 274 RCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTI 333
G I + A +I + ++L+ ++ K VF++MK+ N +
Sbjct: 282 GLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN----VV 337
Query: 334 GYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKM 393
+ ++ + + EEAVK+ M + G+ P+ T A + + + + K
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 394 KELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHW 453
+ N L+ ++ + ID +L EM+ + ++ ++ + + G
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRA 453
Query: 454 NNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVA 501
+L +MV+ LKP+ V+ +AG ++ + + M +
Sbjct: 454 VETIQLFDKMVQH-GLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 190/391 (48%), Gaps = 40/391 (10%)
Query: 105 QSLAFFNWATSLKNFPS-----SPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAE 159
+S+ FN S+ + S PE I L GK+ A L D + R V
Sbjct: 26 RSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAE---ARKLFDGLPERDVV---- 78
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV 219
T++ +I Y++ G EA F+R++ + V + +VS R ++ A+ F +
Sbjct: 79 TWTHVITGYIKLGDMREARELFDRVDS---RKNVVTWTAMVSGYLRSKQLSIAEMLFQEM 135
Query: 220 KDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQIT 279
+R +V+ + ++I G+ ++G+I++A E+F +M + N+ +++ ++ +L + G+I
Sbjct: 136 PER---NVVSWNTMIDGYAQSGRIDKALELFDEMPE----RNIVSWNSMVKALVQRGRID 188
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLI 339
A ++F M + V++ +++ K G+ ++ ++F+ M N I +N +I
Sbjct: 189 EAMNLFERM----PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERN----IISWNAMI 240
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCL 399
+ ++ ++EA ++ +M ++ A ++N++ + ++N A ++ +M E
Sbjct: 241 TGYAQNNRIDEADQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLFDRMPE---- 292
Query: 400 PNTLTYNILMRMFAESKSIDMVLKL-KKEMDENQVEPNVNTYRILILMFCEKGHWNNAYK 458
N +++ ++ + E+K + L + K + + V+PNV TY + IL C +
Sbjct: 293 KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTY-VSILSACSDLAGLVEGQ 351
Query: 459 LMKEMVEEKSLKPNLQVYENVLELLRKAGQL 489
+ +++ + + N V +L + K+G+L
Sbjct: 352 QIHQLISKSVHQKNEIVTSALLNMYSKSGEL 382
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 137/325 (42%), Gaps = 57/325 (17%)
Query: 119 FPSSPE----PYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLA 174
F PE + M+D + D A L D M R + +++ +++ V+ G
Sbjct: 132 FQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRI 187
Query: 175 AEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLI 234
EA++ F RM D V+ + +V L + + +EA+ FD + +R ++I + ++I
Sbjct: 188 DEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER---NIISWNAMI 240
Query: 235 HGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCN 294
G+ + +I+ A+++F+ M + + +++ +I R ++ +A +F M +
Sbjct: 241 TGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPE---- 292
Query: 295 PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRD-ENLEEAVK 353
N +++ +++ +V+ E+ L VF++M R +G I C D L E +
Sbjct: 293 KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQ 352
Query: 354 V-------------------LNLMVKKG--------------VAPNSSTFNSIFGCIAKL 380
+ LN+ K G + ++NS+ A
Sbjct: 353 IHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHH 412
Query: 381 HDVNGAHRMYAKMKELNCLPNTLTY 405
A MY +M++ P+ +TY
Sbjct: 413 GHGKEAIEMYNQMRKHGFKPSAVTY 437
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 158/350 (45%), Gaps = 17/350 (4%)
Query: 155 EITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQS 214
E T +++ ++ Y + G EA+ F++M V PD VA+ V+++ + ++ +S
Sbjct: 184 ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRS 243
Query: 215 FFDSVKD---RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDS 271
SV EPD+++ + ++ C G++ A+ +F MK PN+ ++ +I
Sbjct: 244 IHASVVKMGLEIEPDLLISLNTMYAKC--GQVATAKILFDKMK----SPNLILWNAMISG 297
Query: 272 LCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAAD 331
+ G A D+F EMI+ P+ ++ S + + G E+ ++ + R + D
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357
Query: 332 TIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYA 391
+ LI+ + ++E A V + + + V S+ +G + + A +Y
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVG-YGLHGRARE---AISLYR 413
Query: 392 KMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKG 451
M+ PN +T+ L+ S + M ++++ P Y +I + G
Sbjct: 414 AMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAG 473
Query: 452 HWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVA 501
H + AY+++K M ++P + V+ +L +K +++ E +++ +
Sbjct: 474 HLDQAYEVIKCM----PVQPGVTVWGALLSACKKHRHVELGEYAAQQLFS 519
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 142/343 (41%), Gaps = 37/343 (10%)
Query: 188 GVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAE 247
G D + +++ + RR A++ F+ + E ++ +T+++ + + G+ A
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLP-LPERTIVSWTAIVSAYAQNGEPMEAL 207
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
EIF M+ +KP+ V+++ + + + A ++ G SL ++
Sbjct: 208 EIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY 267
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
K G+ +F++MK N I +N +I + ++ EA+ + + M+ K V P++
Sbjct: 268 AKCGQVATAKILFDKMKSPN----LILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDT 323
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSI--------- 418
+ S A++ + A MY + + + + L+ MFA+ S+
Sbjct: 324 ISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR 383
Query: 419 ----DMV------------------LKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNA 456
D+V + L + M+ V PN T+ L++ G
Sbjct: 384 TLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Query: 457 YKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
+ M + K + P Q Y V++LL +AG L E+++ M
Sbjct: 444 WWFFNRMADHK-INPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 157/409 (38%), Gaps = 73/409 (17%)
Query: 85 STARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDL--- 141
+AR V E G+P + +W + + + EP +E L++ ++R D+
Sbjct: 171 GSARTVFE-------GLPLPER-TIVSWTAIVSAYAQNGEP-MEALEIFSQMRKMDVKPD 221
Query: 142 ---------AWHLIDSMKT----------RGVEITAETFSVLIRRYVRAGLAAEAVHAFN 182
A+ + +K G+EI + L Y + G A A F+
Sbjct: 222 WVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFD 281
Query: 183 RMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCRAG 241
+M+ +P+ + + ++S + A EA F + + PD I TS I + G
Sbjct: 282 KMK----SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 242 KIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMID----------- 290
+E+A +++ + + + +V S +ID +CG + A VF +D
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 291 --------------------AGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAA 330
G +PN VTF L+ +G + FN+M
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINP 457
Query: 331 DTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMY 390
Y +I+ R +L++A +V+ M V P + + ++ K V Y
Sbjct: 458 QQQHYACVIDLLGRAGHLDQAYEVIKCM---PVQPGVTVWGALLSACKKHRHVELGE--Y 512
Query: 391 AKMKELNCLP-NTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVN 438
A + + P NT Y L ++A ++ D V +++ M E + +V
Sbjct: 513 AAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVG 561
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 168/385 (43%), Gaps = 59/385 (15%)
Query: 164 LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD-R 222
+I +VR GL +A+ + +M +GV+PD +V + + + D+V
Sbjct: 109 IISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG 168
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
+ + + +SLI + GKI+ ++F D ++ + ++++++ +CG +
Sbjct: 169 MDCNEFVASSLIKAYLEYGKIDVPSKLF----DRVLQKDCVIWNVMLNGYAKCGALDSVI 224
Query: 283 DVFAEMIDAGCNPNAVTF-----------------------------------NSLMRVH 307
F+ M +PNAVTF NSL+ ++
Sbjct: 225 KGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMY 284
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
K GR + ++F M R ADT+ +N +I + + +EE++ M+ GV P++
Sbjct: 285 SKCGRFDDASKLFRMMSR----ADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKE 427
TF+S+ ++K ++ K+++C + ++I + +F S ID K +
Sbjct: 341 ITFSSLLPSVSKFENLE-------YCKQIHCY--IMRHSISLDIFLTSALIDAYFKCRGV 391
Query: 428 MDENQVEPNVNTYRILILM-----FCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLEL 482
+ N+ +++ + G + ++ ++ + +V+ K + PN ++L +
Sbjct: 392 SMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-ISPNEITLVSILPV 450
Query: 483 LRKAGQLKMHEELVEKMVARGFVSR 507
+ LK+ EL ++ +GF +R
Sbjct: 451 IGILLALKLGRELHGFIIKKGFDNR 475
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/421 (18%), Positives = 168/421 (39%), Gaps = 62/421 (14%)
Query: 87 ARRVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLI 146
A +++ G HG+ + F S+KN +L + K FD A L
Sbjct: 250 ASKLLIDLGVQLHGLVVVSGVDF---EGSIKN---------SLLSMYSKCGRFDDASKLF 297
Query: 147 DSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSL--- 203
M +R +T ++ +I YV++GL E++ F M GV PD + S ++ S+
Sbjct: 298 -RMMSRADTVT---WNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 353
Query: 204 -----CRK---------------------------RRAEEAQSFFDSVKDRFEPDVILYT 231
C++ R AQ+ F DV+++T
Sbjct: 354 ENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN---SVDVVVFT 410
Query: 232 SLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDA 291
++I G+ G + E+F+ + I PN T ++ + + ++ +I
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470
Query: 292 GCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEA 351
G + +++ ++ K GR ++F ++ + D + +N +I + +N A
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSK----RDIVSWNSMITRCAQSDNPSAA 526
Query: 352 VKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRM 411
+ + M G+ + + ++ A L + ++ M + + + + + L+ M
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 586
Query: 412 FAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKP 471
+A+ ++ + + K M E N+ ++ +I G ++ L EMVE+ ++P
Sbjct: 587 YAKCGNLKAAMNVFKTMKEK----NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRP 642
Query: 472 N 472
+
Sbjct: 643 D 643
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/373 (19%), Positives = 161/373 (43%), Gaps = 31/373 (8%)
Query: 145 LIDS-MKTRGVEITAETFS-----------VLIRRYVRAGLAAEAVHAFNRMEDYGVAPD 192
LID+ K RGV + FS +I Y+ GL +++ F + ++P+
Sbjct: 381 LIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPN 440
Query: 193 KVA-VSI--VVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEI 249
++ VSI V+ L + E F +K F+ + ++I + + G++ A EI
Sbjct: 441 EITLVSILPVIGILLALKLGRELHGFI--IKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498
Query: 250 FKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVK 309
F+ + K ++ +++ +I + + A D+F +M +G + V+ ++ +
Sbjct: 499 FERLS----KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACAN 554
Query: 310 AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSST 369
+ M + + A+D + LI+ + + NL+ A+ V M +K + +
Sbjct: 555 LPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIV----S 610
Query: 370 FNSIFGCIAKLHDVNGAHRMYAKMKELNCL-PNTLTYNILMRMFAESKSIDMVLKLKKEM 428
+NSI + + ++ +M E + + P+ +T+ ++ +D ++ + M
Sbjct: 611 WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSM 670
Query: 429 DEN-QVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAG 487
E+ ++P Y ++ +F G AY+ +K M P+ V+ +L R
Sbjct: 671 TEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSM----PFPPDAGVWGTLLGACRLHK 726
Query: 488 QLKMHEELVEKMV 500
+++ E K++
Sbjct: 727 NVELAEVASSKLM 739
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 145/323 (44%), Gaps = 19/323 (5%)
Query: 117 KNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAE 176
K F + ++D+ K +LA+ + + + R + +++ +I R ++ +
Sbjct: 470 KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIV----SWNSMITRCAQSDNPSA 525
Query: 177 AVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS--VKDRFEPDVILYTSLI 234
A+ F +M G+ D V++S +S+ C +E +K DV ++LI
Sbjct: 526 AIDIFRQMGVSGICYDCVSISAALSA-CANLPSESFGKAIHGFMIKHSLASDVYSESTLI 584
Query: 235 HGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMID-AGC 293
+ + G ++ A +FK MK+ N+ +++ +I + G++ + +F EM++ +G
Sbjct: 585 DMYAKCGNLKAAMNVFKTMKE----KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGI 640
Query: 294 NPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR-FNCAADTIGYNFLIECHCRDENLEEAV 352
P+ +TF ++ G ++ ++ F M + Y +++ R L EA
Sbjct: 641 RPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAY 700
Query: 353 KVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILM-RM 411
+ + M P++ + ++ G +V A +K+ +L+ P+ Y +L+
Sbjct: 701 ETVKSM---PFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLD--PSNSGYYVLISNA 755
Query: 412 FAESKSIDMVLKLKKEMDENQVE 434
A ++ + V K++ M E +V+
Sbjct: 756 HANAREWESVTKVRSLMKEREVQ 778
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Query: 187 YGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIER 245
+ + P + + ++ C++ R ++A+ DS+ + PDV+ +++LI+G+C+A +++
Sbjct: 4 WSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDN 63
Query: 246 AEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMR 305
EIF +M GI N TY+ +I C+ G + A D+ EMI G P+ +TF+ ++
Sbjct: 64 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA 123
Query: 306 VHVKAGRTEKVLQVFNQMKR 325
K + +++
Sbjct: 124 GLCSKKELRKAFAILEDLQK 143
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%)
Query: 258 IKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVL 317
I P TY+ +ID C+ ++ A + M GC+P+ VTF++L+ + KA R + +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 318 QVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIF 374
++F +M R A+T+ Y LI C+ +L+ A +LN M+ GVAP+ TF+ +
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%)
Query: 225 PDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDV 284
P I Y S+I G+C+ +++ A+ + M G P+V T+S +I+ C+ ++ ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 285 FAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
F EM G N VT+ +L+ + G + + N+M A D I ++ ++ C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 345 DENLEEAVKVLNLMVK 360
+ L +A +L + K
Sbjct: 128 KKELRKAFAILEDLQK 143
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 71/141 (50%)
Query: 323 MKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHD 382
M R++ TI YN +I+ C+ + +++A ++L+ M KG +P+ TF+++ K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 383 VNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRI 442
V+ ++ +M + NT+TY L+ F + +D L EM V P+ T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 443 LILMFCEKGHWNNAYKLMKEM 463
++ C K A+ +++++
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 1/142 (0%)
Query: 358 MVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKS 417
M++ + P + T+NS+ K V+ A RM M C P+ +T++ L+ + ++K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 418 IDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYE 477
+D +++ EM + N TY LI FC+ G + A L+ EM+ + P+ +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI-SCGVAPDYITFH 119
Query: 478 NVLELLRKAGQLKMHEELVEKM 499
+L L +L+ ++E +
Sbjct: 120 CMLAGLCSKKELRKAFAILEDL 141
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 35/170 (20%)
Query: 119 FPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAV 178
FP++ Y M+D K D A ++DSM ++G TFS LI Y +A +
Sbjct: 7 FPTTI-TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 179 HAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWC 238
F M G+ + V YT+LIHG+C
Sbjct: 66 EIFCEMHRRGIVANTVT----------------------------------YTTLIHGFC 91
Query: 239 RAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM 288
+ G ++ A+++ +M G+ P+ T+ ++ LC ++ +A + ++
Sbjct: 92 QVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 141
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/138 (15%), Positives = 69/138 (50%)
Query: 295 PNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKV 354
P +T+NS++ K R + ++ + M C+ D + ++ LI +C+ + ++ +++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 355 LNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
M ++G+ N+ T+ ++ ++ D++ A + +M P+ +T++ ++
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 415 SKSIDMVLKLKKEMDENQ 432
K + + +++ +++
Sbjct: 128 KKELRKAFAILEDLQKSE 145
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 10/170 (5%)
Query: 181 FNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFF-DSVKDRFEPDVILYTSLIHGWCR 239
F M G+ + V + ++ L + + AQ F + V D PD++ Y L+ G C+
Sbjct: 4 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCK 63
Query: 240 ---------AGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMID 290
AGK+E ++F + G+KPNV TY+ +I C+ G A+ +F +M +
Sbjct: 64 NGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKE 123
Query: 291 AGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIE 340
G P++ T+N+L+R H++ G ++ +M+ A D Y + +
Sbjct: 124 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 26/200 (13%)
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVH 307
E+F++M G+ N TY+ +I L + G A ++F EM+ G P+ +T+N L+
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 308 VKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNS 367
K G+ EK L +E+ + + KGV PN
Sbjct: 62 CKNGKLEKALVA--------------------------GKVEDGWDLFCSLSLKGVKPNV 95
Query: 368 STFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKE 427
T+ ++ K A+ ++ KMKE LP++ TYN L+R +L KE
Sbjct: 96 VTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 155
Query: 428 MDENQVEPNVNTYRILILMF 447
M + + +TY ++ M
Sbjct: 156 MRSCRFAGDASTYGLVTDML 175
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 13/183 (7%)
Query: 144 HLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSL 203
L M RG+ T++ LI+ +AG A F M GV PD + +I++ L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 204 CRKRRAEEAQSFFDSVKDRFE-----------PDVILYTSLIHGWCRAGKIERAEEIFKD 252
C+ + E+A V+D ++ P+V+ YT++I G+C+ G E A +F+
Sbjct: 62 CKNGKLEKAL-VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 253 MKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGR 312
MK+ G P+ TY+ +I + R G + ++ EM +A T+ L+ + GR
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGR 179
Query: 313 TEK 315
+K
Sbjct: 180 LDK 182
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 358 MVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKS 417
M ++G+ N+ T+ ++ + + D + A ++ +M P+ +TYNIL+ ++
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 418 IDMVLKLKKEMDE---------NQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKS 468
++ L K D V+PNV TY +I FC+KG AY L ++M E+
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 469 LKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
L P+ Y ++ + G EL+++M
Sbjct: 127 L-PDSGTYNTLIRAHLRDGDKAASAELIKEM 156
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 134/307 (43%), Gaps = 37/307 (12%)
Query: 226 DVILYTSLIHGWCRAGKIERAEEIFKDMKDAG-IKPNVHTYSIVIDSLCRCGQITRAHDV 284
+V ++ +LI G+ G A ++++M+ +G ++P+ HTY +I ++ + +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 285 FAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCR 344
+ +I +G NSL+ ++ G +VF++M D + +N +I
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE----KDLVAWNSVINGFAE 199
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
+ EEA+ + M KG+ P+ T S+ AK+ + R++ M ++ N +
Sbjct: 200 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 259
Query: 405 YNILMRMFAESKSIDMVLKLKKEM-DENQVEPN-------VNTYR--------------- 441
N+L+ ++A ++ L EM D+N V VN +
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 319
Query: 442 --------ILILMFCEK-GHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMH 492
+ IL C G ++ + M EE ++P ++ + +++LL +AGQ+K
Sbjct: 320 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 379
Query: 493 EELVEKM 499
E ++ M
Sbjct: 380 YEYIKSM 386
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 137/311 (44%), Gaps = 25/311 (8%)
Query: 164 LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR- 222
L+ Y G A A F++M + D VA + V++ + EEA + + + +
Sbjct: 162 LLHLYANCGDVASAYKVFDKMPE----KDLVAWNSVINGFAENGKPEEALALYTEMNSKG 217
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
+PD SL+ + G + + + M G+ N+H+ ++++D RCG++ A
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 277
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR----FNCAADTIGYNFL 338
+F EM+D N+V++ SL+ G ++ +++F M+ C +G L
Sbjct: 278 TLFDEMVDK----NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVG--IL 331
Query: 339 IEC-HCRDENLEEAVKVLNLMVKK-GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKEL 396
C HC ++E + M ++ + P F + +A+ V A Y +K +
Sbjct: 332 YACSHCG--MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA---YEYIKSM 386
Query: 397 NCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPN-VNTYRILILMFCEKGHWNN 455
PN + + L+ D+ + ++ Q+EPN Y +L M+ + W++
Sbjct: 387 PMQPNVVIWRTLLGACTVHGDSDLAEFARIQI--LQLEPNHSGDYVLLSNMYASEQRWSD 444
Query: 456 AYKLMKEMVEE 466
K+ K+M+ +
Sbjct: 445 VQKIRKQMLRD 455
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 107/258 (41%), Gaps = 43/258 (16%)
Query: 224 EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHD 283
E D++ + S+I+G+ GK E A ++ +M GIKP+ T ++ + + G +T
Sbjct: 184 EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR 243
Query: 284 VFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
V MI G N + N L+ ++ + GR E+ +F++M N ++ + LI
Sbjct: 244 VHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKN----SVSWTSLIVGLA 299
Query: 344 RDENLEEAVKVLNLM-VKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
+ +EA+++ M +G+ P TF I + V + +M+E
Sbjct: 300 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE------- 352
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
E ++EP + + ++ + G AY+ +K
Sbjct: 353 ---------------------------EYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS 385
Query: 463 MVEEKSLKPNLQVYENVL 480
M ++PN+ ++ +L
Sbjct: 386 M----PMQPNVVIWRTLL 399
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 127/279 (45%), Gaps = 3/279 (1%)
Query: 229 LYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM 288
+ S+I + GK E+F+ MK+ +K + T ++ + +L RC Q+ A D F+ M
Sbjct: 141 FFNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLM 200
Query: 289 IDAGCNPNAV-TFNSLMRVHVKAGRTEKVLQVFNQMKRF-NCAADTIGYNFLIECHCRDE 346
+++G + V + ++ V G + ++ +M A+ + + +I C +
Sbjct: 201 VESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRW 260
Query: 347 NLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYN 406
+ EE VL LM K+ V + ++ + V A R+ M + + YN
Sbjct: 261 DFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYN 320
Query: 407 ILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEE 466
++M ++ ++ V++L EM V PN +TY +L+ C+ G A + E+
Sbjct: 321 LIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNEL-RV 379
Query: 467 KSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARGFV 505
+ + ++Y + E + G + E+V +M+ GF+
Sbjct: 380 NEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFI 418
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 113/268 (42%), Gaps = 38/268 (14%)
Query: 139 FDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKV-AVS 197
F + + MK V+I +T ++ + R A F+ M + G+ V +++
Sbjct: 155 FSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLT 214
Query: 198 IVVSSLC------RKRRAEEAQSFFDSVK-----------------DRFEPDVIL----- 229
+VV+ LC R R E VK D E D++L
Sbjct: 215 VVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEK 274
Query: 230 ---------YTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITR 280
Y LI G+ GK+E AE + M D ++ + Y+++++ R G + +
Sbjct: 275 ESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEK 334
Query: 281 AHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIE 340
++++EM G PN T+ LM KAG+ + + N+++ D Y+ L E
Sbjct: 335 VIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSE 394
Query: 341 CHCRDENLEEAVKVLNLMVKKGVAPNSS 368
R ++++++V+ M++ G P ++
Sbjct: 395 ECYRVGMIDKSLEVVAEMIRDGFIPGAT 422
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 73/178 (41%), Gaps = 4/178 (2%)
Query: 138 HFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVS 197
DL L M+ V + +++ VLI + G EA M D + + +
Sbjct: 264 ELDLVLKL---MEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYN 320
Query: 198 IVVSSLCRKRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDA 256
++++ R E+ + + R P+ Y L++G C+AGK+ A +++
Sbjct: 321 LIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVN 380
Query: 257 GIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTE 314
+ + YS + + R G I ++ +V AEMI G P A L + R E
Sbjct: 381 EFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNRKE 438
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 127/278 (45%), Gaps = 20/278 (7%)
Query: 109 FFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRY 168
F++A+ NF S ++ ++ G+ R+F+L ++ ++ G +T E F+ LI+ Y
Sbjct: 70 IFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVY 129
Query: 169 VRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRR-AEEAQSFFDSVK-DRFEPD 226
A L + + F +M ++ P ++ ++ L R ++A F S + P+
Sbjct: 130 AEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPN 189
Query: 227 VILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFA 286
Y L+ +C + A ++F M + + P+V +Y I+I CR GQ+ A ++
Sbjct: 190 TRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLD 249
Query: 287 EMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGY-------NFLI 339
+M++ G P+ L G +F++ K++ + G+ N L+
Sbjct: 250 DMLNKGFVPDRTLIGGL----CDQG-------MFDEGKKYLEEMISKGFSPHFSVSNCLV 298
Query: 340 ECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCI 377
+ C +EEA V+ +++K G +S T+ + I
Sbjct: 299 KGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLI 336
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 119/263 (45%), Gaps = 46/263 (17%)
Query: 246 AEEIFKDMKDAGIKPNV-HTYS---IVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFN 301
A+EIF A +PN H+ S I+I L R DV A+ +G F
Sbjct: 67 AKEIFDY---ASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFT 123
Query: 302 SLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKK 361
L++V+ +A EKVL F +M FN N ++L+++V
Sbjct: 124 YLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLN----------------RILDVLV-- 165
Query: 362 GVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMV 421
S G + K ++ + R++ M PNT +YN+LM+ F + + +
Sbjct: 166 ----------SHRGYLQKAFELFKSSRLHGVM------PNTRSYNLLMQAFCLNDDLSIA 209
Query: 422 LKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLE 481
+L +M E V P+V++Y+ILI FC KG N A +L+ +M+ K P+ ++
Sbjct: 210 YQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDML-NKGFVPD----RTLIG 264
Query: 482 LLRKAGQLKMHEELVEKMVARGF 504
L G ++ +E+M+++GF
Sbjct: 265 GLCDQGMFDEGKKYLEEMISKGF 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 96/232 (41%), Gaps = 14/232 (6%)
Query: 103 FYQSLAFFNWATSLKNFPSSPEPYIEMLD-LAGKLRHFDLAWHLIDSMKTRGVEITAETF 161
FY+ L F NF P+ +LD L + A+ L S + GV ++
Sbjct: 142 FYKMLEF--------NFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSY 193
Query: 162 SVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKD 221
++L++ + + A F +M + V PD + I++ CRK + A D + +
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN 253
Query: 222 R-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITR 280
+ F PD +LI G C G + ++ ++M G P+ + ++ C G++
Sbjct: 254 KGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 309
Query: 281 AHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADT 332
A DV ++ G ++ T+ ++ + +EK+ + DT
Sbjct: 310 ACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDT 361
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 9/175 (5%)
Query: 285 FAEMIDAGCNPNAVTFNSLMRVHVK-AGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHC 343
F +M++ P N ++ V V G +K ++F + +T YN L++ C
Sbjct: 142 FYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC 201
Query: 344 RDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTL 403
+++L A ++ M+++ V P+ ++ + + VNGA + M +P+
Sbjct: 202 LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRT 261
Query: 404 TYNIL--MRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNA 456
L MF E K K +EM P+ + L+ FC G A
Sbjct: 262 LIGGLCDQGMFDEGK------KYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 310
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 99/202 (49%), Gaps = 1/202 (0%)
Query: 124 EPYIEMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNR 183
E Y M+ + + ++ ++ M+ +G++ + +F ++I + + E
Sbjct: 188 ETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAM 247
Query: 184 MEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHGWCRAGK 242
M+D GV +I + SLC++++++EA++ D + +P+ + Y+ LIHG+C
Sbjct: 248 MKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDD 307
Query: 243 IERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNS 302
E A+++FK M + G KP+ Y +I LC+ G A + E ++ P+ S
Sbjct: 308 FEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKS 367
Query: 303 LMRVHVKAGRTEKVLQVFNQMK 324
L+ K + E+ ++ Q+K
Sbjct: 368 LVNGLAKDSKVEEAKELIGQVK 389
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 135/297 (45%), Gaps = 3/297 (1%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSV-LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVA 195
+HF +L+D ++ +E F+ I Y +A + ++ F +E + ++ +
Sbjct: 94 KHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKS 153
Query: 196 VSIVVSSLCRKRRAEEAQSFFDSVKDRF--EPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
++ ++ + + +EA+ + + + EPD+ Y +I +C +G + I +M
Sbjct: 154 LNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEM 213
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRT 313
+ GIKPN ++ ++I + V A M D G N T+N ++ K ++
Sbjct: 214 ERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKS 273
Query: 314 EKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
++ + + M +T+ Y+ LI C +++ EEA K+ +MV +G P+S + ++
Sbjct: 274 KEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTL 333
Query: 374 FGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDE 430
+ K D A + + E N +P+ L+ A+ ++ +L ++ E
Sbjct: 334 IYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKE 390
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 137/310 (44%), Gaps = 8/310 (2%)
Query: 192 DKVAVSIVVSSLCRKRRAEEAQSFFDS-VKDRFEPDVILYTSLIHG---WCRAGKIERAE 247
D++A S V +L K+ + D +++R PD+ H + +A ++ +
Sbjct: 79 DRIAFSAAVENLAEKKHFSAVSNLLDGFIENR--PDLKSERFAAHAIVLYAQANMLDHSL 136
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDA-GCNPNAVTFNSLMRV 306
+F+D++ I V + + ++ + A V+ EM G P+ T+N +++V
Sbjct: 137 RVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKV 196
Query: 307 HVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPN 366
++G + +M+R ++ + +I ++ +E KVL +M +GV
Sbjct: 197 FCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIG 256
Query: 367 SSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKK 426
ST+N + K A + M PNT+TY+ L+ F + KL K
Sbjct: 257 VSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFK 316
Query: 427 EMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKA 486
M +P+ Y LI C+ G + A L KE + EK+ P+ + ++++ L K
Sbjct: 317 IMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESM-EKNWVPSFSIMKSLVNGLAKD 375
Query: 487 GQLKMHEELV 496
+++ +EL+
Sbjct: 376 SKVEEAKELI 385
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 2/229 (0%)
Query: 146 IDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCR 205
I+ K G+E ET++ +I+ + +G A+ + ME G+ P+ + +++S
Sbjct: 175 IEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYA 234
Query: 206 KRRAEEAQSFFDSVKDR-FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHT 264
+ +++E +KDR V Y I C+ K + A+ + M AG+KPN T
Sbjct: 235 EDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVT 294
Query: 265 YSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMK 324
YS +I C A +F M++ GC P++ + +L+ K G E L + +
Sbjct: 295 YSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESM 354
Query: 325 RFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
N L+ +D +EEA +++ VK+ N +N +
Sbjct: 355 EKNWVPSFSIMKSLVNGLAKDSKVEEAKELIG-QVKEKFTRNVELWNEV 402
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 146/329 (44%), Gaps = 45/329 (13%)
Query: 207 RRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM-KDAGIKPNVHTY 265
R +A+ FD + EPDVI +T+++ + + E A +F M + G+ P+ T+
Sbjct: 212 REPVDARRVFDEMP---EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTF 268
Query: 266 SIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKR 325
V+ + ++ + ++ ++I G N V +SL+ ++ K G + QVFN M +
Sbjct: 269 GTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSK 328
Query: 326 FNCAADTIGYNFLIECHCRDENLEEAVKVLNLM--------------------------- 358
N ++ ++ L+ +C++ E+A+++ M
Sbjct: 329 KN----SVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEI 384
Query: 359 ----VKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAE 414
V++G N +++ K ++ A R+Y+KM + N +T+N ++ A+
Sbjct: 385 HGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS----IRNMITWNAMLSALAQ 440
Query: 415 SKSIDMVLKLKKEMDENQVEPNVNTYRILILMFC-EKGHWNNAYKLMKEMVEEKSLKPNL 473
+ + + +M + ++P+ ++ I IL C G + M + +KP
Sbjct: 441 NGRGEEAVSFFNDMVKKGIKPDYISF-IAILTACGHTGMVDEGRNYFVLMAKSYGIKPGT 499
Query: 474 QVYENVLELLRKAGQLKMHEELVEKMVAR 502
+ Y +++LL +AG + E L+E+ R
Sbjct: 500 EHYSCMIDLLGRAGLFEEAENLLERAECR 528
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 128/294 (43%), Gaps = 17/294 (5%)
Query: 211 EAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVID 270
E + FD RF D I +TS++ G+ + +A E+F +M G+ N T S +
Sbjct: 115 ETRRVFDG---RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVK 171
Query: 271 SLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAA 330
+ G++ +I G N ++L ++ +VF++M
Sbjct: 172 ACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPE----P 227
Query: 331 DTIGYNFLIECHCRDENLEEAVKVLNLMVK-KGVAPNSSTFNSIFGCIAKLHDVNGAHRM 389
D I + ++ +++ EEA+ + M + KG+ P+ STF ++ L + +
Sbjct: 228 DVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEI 287
Query: 390 YAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCE 449
+ K+ N + + L+ M+ + S+ + +++ + N ++ L+ +C+
Sbjct: 288 HGKLITNGIGSNVVVESSLLDMYGKCGSV----REARQVFNGMSKKNSVSWSALLGGYCQ 343
Query: 450 KGHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVARG 503
G A ++ +EM EEK +L + VL+ +++ +E+ + V RG
Sbjct: 344 NGEHEKAIEIFREM-EEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG 392
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 147/337 (43%), Gaps = 12/337 (3%)
Query: 164 LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR- 222
L Y R G A F+++E PD + +++++ L A+EA S F ++
Sbjct: 311 LCDMYARCGFLNSARRVFDQIER----PDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAH 282
F PD I SL+ + + + +I + G ++ + ++ C +
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426
Query: 283 DVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECH 342
++F + + N ++V++N+++ ++ + ++L++F M C D I L+
Sbjct: 427 NLFEDFRN---NADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Query: 343 CRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNT 402
+L+ +V +K G+AP N + AK + A R++ M +
Sbjct: 484 VEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDN----RDV 539
Query: 403 LTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKE 462
++++ L+ +A+S + L L KEM +EPN T+ ++ G KL
Sbjct: 540 VSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYAT 599
Query: 463 MVEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKM 499
M E + P + V++LL +AG+L E +++M
Sbjct: 600 MQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEM 636
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
Query: 188 GVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAE 247
G+AP++ + ++ + +A+ FDS+ +R DV+ +++LI G+ ++G E A
Sbjct: 503 GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR---DVVSWSTLIVGYAQSGFGEEAL 559
Query: 248 EIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEM-IDAGCNPNAVTFNSLMRV 306
+FK+MK AGI+PN T+ V+ + G + ++A M + G +P + ++ +
Sbjct: 560 ILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDL 619
Query: 307 HVKAGRTEKVLQVFNQMK 324
+AGR + + ++MK
Sbjct: 620 LARAGRLNEAERFIDEMK 637
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/446 (19%), Positives = 171/446 (38%), Gaps = 80/446 (17%)
Query: 129 MLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG 188
+L + GK A + D M R + +++ +I Y + G AEA+ + +M
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLV----SYTSVITGYSQNGQGAEAIRLYLKMLQED 163
Query: 189 VAPDKVAVSIVVSS--------LCRKRRAEE----------AQSFFDSVKDRFEP----- 225
+ PD+ A ++ + L ++ A+ AQ+ ++ RF
Sbjct: 164 LVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDAS 223
Query: 226 ---------DVILYTSLIHGWCRAGKIERAEEIFKDMKDAGI-KPNVHTYSIVIDSLCRC 275
D+I ++S+I G+ + G A K+M G+ PN + + SL C
Sbjct: 224 RVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG---SSLKAC 280
Query: 276 GQITR---AHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADT 332
+ R + I + NA+ SL ++ + G +VF+Q++R DT
Sbjct: 281 SSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIER----PDT 336
Query: 333 IGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAK 392
+N +I + +EAV V + M G P++ + S+ K ++ ++++
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSY 396
Query: 393 MKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQVEPNVNT------------- 439
+ + L + N L+ M+ + L ++ N + NT
Sbjct: 397 IIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVE 456
Query: 440 ----YRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVY---------------ENVL 480
++++++ CE H L++ VE SLK QV+ ++
Sbjct: 457 MLRLFKLMLVSECEPDHITMG-NLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLI 515
Query: 481 ELLRKAGQLKMHEELVEKMVARGFVS 506
++ K G L + + M R VS
Sbjct: 516 DMYAKCGSLGQARRIFDSMDNRDVVS 541
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 145 LIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRME-DYGVAPDKVAVSIVVSSL 203
L MK+ G+E TF ++ GL E + + M+ ++G++P K S VV L
Sbjct: 561 LFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLL 620
Query: 204 CRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEE 248
R R EA+ F D +K EPDV+++ +L+ G + A++
Sbjct: 621 ARAGRLNEAERFIDEMK--LEPDVVVWKTLLSACKTQGNVHLAQK 663
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 111/257 (43%), Gaps = 25/257 (9%)
Query: 234 IHGWCRAGKIERAEEIFK-DMKDAGIKPNVHTYSIVIDSLCRCGQ---ITRAHDVFAEMI 289
I+ C++ A E F K++ K + TY I +C C + + + ++
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTY---ISLICACSSSRSLAQGRKIHDHIL 94
Query: 290 DAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLE 349
++ C + + N ++ ++ K G +VF+ M N + Y +I + ++
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERN----LVSYTSVITGYSQNGQGA 150
Query: 350 EAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILM 409
EA+++ M+++ + P+ F SI A DV +++A++ +L + + N L+
Sbjct: 151 EAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALI 210
Query: 410 RMFAESKSIDMVLKLKKEMDENQV-----EPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
M+ ++ + D ++V ++ ++ +I F + G A +KEM+
Sbjct: 211 AMY---------VRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEML 261
Query: 465 EEKSLKPNLQVYENVLE 481
PN ++ + L+
Sbjct: 262 SFGVFHPNEYIFGSSLK 278
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 155/384 (40%), Gaps = 83/384 (21%)
Query: 142 AWHLIDSMKTRGVEITAETFSVLIRRYVRAGL--AAEAVHAFN-RMEDYGVAPDKVAVSI 198
A ++ M + G+E+ T+ +IR AGL + VHA+ R ED+ D VS+
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSL 329
Query: 199 VVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDA-- 256
C K +EA++ F+ + + D++ + +L+ G+ +G I A+ IFK+MK+
Sbjct: 330 YYK--CGK--FDEARAIFEKMPAK---DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 257 -----------------------------GIKPNVHTYSIVIDSLCRCGQITRAHDVFAE 287
G +P + +S I S G A+
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 288 MIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDEN 347
++ G + + N+L+ ++ K G E+ QVF M D++ +N LI + +
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP----CLDSVSWNALIAALGQHGH 498
Query: 348 LEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNI 407
EAV V M+KKG+ P+ T ++ + V+ + + M+ + +P
Sbjct: 499 GAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP------- 551
Query: 408 LMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEK 467
P + Y LI + C G +++A + ++E
Sbjct: 552 ---------------------------PGADHYARLIDLLCRSGKFSDA----ESVIESL 580
Query: 468 SLKPNLQVYENVLELLRKAGQLKM 491
KP +++E +L R G +++
Sbjct: 581 PFKPTAEIWEALLSGCRVHGNMEL 604
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSV 219
+++ LI + G AEAV + M G+ PD++ + V+++ ++ + +FDS+
Sbjct: 485 SWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSM 544
Query: 220 KD--RFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQ 277
+ R P Y LI CR+GK AE + + + KP + ++ S CR
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLP---FKPTAEIWEALL-SGCRVHG 600
Query: 278 ITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMK 324
+ A+ + + T+ L +H G+ E+V +V M+
Sbjct: 601 NMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMR 647
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/266 (18%), Positives = 116/266 (43%), Gaps = 11/266 (4%)
Query: 239 RAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAV 298
R ++ A + ++ G +P H + +ID C+ ++ A +F E+ + P+ +
Sbjct: 26 RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISE----PDKI 81
Query: 299 TFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLM 358
+++ + +G VF + C DT+ YN +I + + A+ + M
Sbjct: 82 ARTTMVSGYCASGDITLARGVFEKAPV--CMRDTVMYNAMITGFSHNNDGYSAINLFCKM 139
Query: 359 VKKGVAPNSSTFNSIFGCIAKL-HDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKS 417
+G P++ TF S+ +A + D + +A + T N L+ ++++ S
Sbjct: 140 KHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCAS 199
Query: 418 IDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLKPNLQVYE 477
+L +++ + +E + ++ ++ + + G+++ L +E++E L Y
Sbjct: 200 SPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFD----LGEELLEGMDDNMKLVAYN 255
Query: 478 NVLELLRKAGQLKMHEELVEKMVARG 503
++ G + E+V +MV+ G
Sbjct: 256 AMISGYVNRGFYQEALEMVRRMVSSG 281
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 134/325 (41%), Gaps = 53/325 (16%)
Query: 175 AEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRFEPDVILYTSLI 234
A AVH + +G P ++ ++ C+ A+ FD + EPD I T+++
Sbjct: 33 ARAVHG--NIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEIS---EPDKIARTTMV 87
Query: 235 HGWCRAGKIERAEEIFKD----MKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMID 290
G+C +G I A +F+ M+D + Y+ +I A ++F +M
Sbjct: 88 SGYCASGDITLARGVFEKAPVCMRDTVM------YNAMITGFSHNNDGYSAINLFCKMKH 141
Query: 291 AGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEE 350
G P+ TF S++ EK Q +F+ AA G ++
Sbjct: 142 EGFKPDNFTFASVLAGLALVADDEK------QCVQFHAAALKSGAGYI------------ 183
Query: 351 AVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMR 410
V N +V S ++ + LH A +++ ++ E + ++ +M
Sbjct: 184 -TSVSNALV--------SVYSKCASSPSLLHS---ARKVFDEILE----KDERSWTTMMT 227
Query: 411 MFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKSLK 470
+ ++ D+ +L + MD+N + Y +I + +G + A ++++ MV ++
Sbjct: 228 GYVKNGYFDLGEELLEGMDDNM---KLVAYNAMISGYVNRGFYQEALEMVRRMV-SSGIE 283
Query: 471 PNLQVYENVLELLRKAGQLKMHEEL 495
+ Y +V+ AG L++ +++
Sbjct: 284 LDEFTYPSVIRACATAGLLQLGKQV 308
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 136/315 (43%), Gaps = 45/315 (14%)
Query: 223 FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIV---IDSLCRCGQIT 279
F ++ +Y + A K E EEI ++ PN+ V I+ R G
Sbjct: 67 FRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKY---PNMSKEGFVARIINLYGRVGMFE 123
Query: 280 RAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQM-KRFNCAADTIGYNFL 338
A VF EM + C A++FN+L+ V + + + V +F ++ + + D YN L
Sbjct: 124 NAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTL 183
Query: 339 IECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNC 398
I+ C + EAV +++ + KG+ P+ TFN + +++A+M E N
Sbjct: 184 IKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNV 243
Query: 399 LPNTLTYNI-LMRMFAESKSIDMVLKLKKEMDENQVEPNVNTYRILILMF---------- 447
+ +YN L+ + E+KS +MV L ++ N+++P+V T+ +I F
Sbjct: 244 KRDIRSYNARLLGLAMENKSEEMV-SLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAI 302
Query: 448 -------------------------CEKGHWNNAYKLMKEMVEEKSLKPNLQVYENVLEL 482
C+ G +AY+L KE+ K L + V + V++
Sbjct: 303 TWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIF-AKRLLVDEAVLQEVVDA 361
Query: 483 LRKAGQLKMHEELVE 497
L K + EE+VE
Sbjct: 362 LVKGSKQDEAEEIVE 376
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 105/228 (46%), Gaps = 2/228 (0%)
Query: 164 LIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDRF 223
+I Y R G+ A F+ M + ++ + ++++ ++ + + F + +
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 224 --EPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRA 281
EPDV Y +LI G C G A + ++++ G+KP+ T++I++ G+
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 282 HDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIEC 341
++A M++ + ++N+ + ++E+++ +F+++K D + +I+
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 342 HCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRM 389
+ L+EA+ + K G P FNS+ I K D+ A+ +
Sbjct: 292 FVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYEL 339
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 125/278 (44%), Gaps = 8/278 (2%)
Query: 110 FNWATSL----KNFPS-SPEPYI-EMLDLAGKLRHFDLAWHLIDSMKTRGVEITAETFSV 163
F W + +P+ S E ++ +++L G++ F+ A + D M R + TA +F+
Sbjct: 87 FEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNA 146
Query: 164 LIRRYVRAGLAAEAVHAFNRM-EDYGVAPDKVAVSIVVSSLCRKRRAEEAQSFFDSVKDR 222
L+ V + F + + PD + + ++ LC K EA + D ++++
Sbjct: 147 LLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENK 206
Query: 223 -FEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRA 281
+PD I + L+H GK E E+I+ M + +K ++ +Y+ + L +
Sbjct: 207 GLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEM 266
Query: 282 HDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIEC 341
+F ++ P+ TF ++++ V G+ ++ + + ++++ C +N L+
Sbjct: 267 VSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPA 326
Query: 342 HCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAK 379
C+ +LE A ++ + K + + + + + K
Sbjct: 327 ICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVK 364
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
Query: 132 LAGKLRHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAP 191
L GK F A LID ++ +G++ TF++L+ G E + RM + V
Sbjct: 187 LCGK-GSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKR 245
Query: 192 DKVAVSIVVSSLCRKRRAEEAQSFFDSVK-DRFEPDVILYTSLIHGWCRAGKIERAEEIF 250
D + + + L + ++EE S FD +K + +PDV +T++I G+ GK++ A +
Sbjct: 246 DIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWY 305
Query: 251 KDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKA 310
K+++ G +P ++ ++ ++C+ G + A+++ E+ + ++ VK
Sbjct: 306 KEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKG 365
Query: 311 GRTEKVLQV 319
+ ++ ++
Sbjct: 366 SKQDEAEEI 374
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 345 DENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLT 404
+E LEE K N M K+G I ++ A +++ +M E NC L+
Sbjct: 91 EEILEEQNKYPN-MSKEGFVAR------IINLYGRVGMFENAQKVFDEMPERNCKRTALS 143
Query: 405 YNILMRMFAESKSIDMVLKLKKEM-DENQVEPNVNTYRILILMFCEKGHWNNAYKLMKEM 463
+N L+ SK D+V + KE+ + +EP+V +Y LI C KG + A L+ E
Sbjct: 144 FNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE- 202
Query: 464 VEEKSLKPNLQVYENVLELLRKAGQLKMHEELVEKMVAR 502
+E K LKP+ + +L G+ + E++ +MV +
Sbjct: 203 IENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEK 241
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 36/289 (12%)
Query: 160 TFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIVVSSLCRKRRAEE----AQSF 215
++ +I Y + G + EA++ F+ M+ GV + VA+ I V S C + A + A S+
Sbjct: 207 AWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAM-ISVLSACTQLGALDQGRWAHSY 265
Query: 216 FDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRC 275
+ +++ + V L T+L+ + + G +E+A E+F M++ NV+T+S ++ L
Sbjct: 266 IE--RNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE----KNVYTWSSALNGLAMN 319
Query: 276 GQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRTEKVLQVFNQMK-RFNCAADTIG 334
G + ++F+ M G PNAVTF S++R G ++ + F+ M+ F
Sbjct: 320 GFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEH 379
Query: 335 YNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSIFGCIAKLHDVNGAHRMY---- 390
Y L++ + R LE+AV ++ M K P+++ ++S+ LH A RMY
Sbjct: 380 YGCLVDLYARAGRLEDAVSIIQQMPMK---PHAAVWSSL------LH----ASRMYKNLE 426
Query: 391 ------AKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQV 433
KM EL N Y +L ++A+S D V +++ M V
Sbjct: 427 LGVLASKKMLELE-TANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGV 474
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/367 (17%), Positives = 159/367 (43%), Gaps = 21/367 (5%)
Query: 137 RHFDLAWHLIDSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYG--VAPDKV 194
++ D A ++D R + T + +IR + ++ + ++ + R+ G + PD
Sbjct: 54 KYLDYANQILD----RSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNY 109
Query: 195 AVSIVVSSLCRKRRAEEA-QSFFDSVKDRFEPDVILYTSLIHGWCRAGKIERAEEIFKDM 253
V+ +V + R E Q +++ F+ D + T LI + G ++ ++F +
Sbjct: 110 TVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSI 169
Query: 254 KDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSLMRVHVKAGRT 313
P+ + ++ + RCG + A +F M + + + +N+++ + + G +
Sbjct: 170 P----CPDFVCRTAMVTACARCGDVVFARKLFEGMPER----DPIAWNAMISGYAQVGES 221
Query: 314 EKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGVAPNSSTFNSI 373
+ L VF+ M+ + + ++ + L++ + + + + ++
Sbjct: 222 REALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTL 281
Query: 374 FGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLKLKKEMDENQV 433
AK D+ A ++ M+E N T++ + A + + L+L M ++ V
Sbjct: 282 VDLYAKCGDMEKAMEVFWGMEE----KNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGV 337
Query: 434 EPNVNTYRILILMFCEK-GHWNNAYKLMKEMVEEKSLKPNLQVYENVLELLRKAGQLKMH 492
PN T+ + +L C G + + M E ++P L+ Y +++L +AG+L+
Sbjct: 338 TPNAVTF-VSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDA 396
Query: 493 EELVEKM 499
++++M
Sbjct: 397 VSIIQQM 403
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/473 (18%), Positives = 190/473 (40%), Gaps = 46/473 (9%)
Query: 30 ASPQHDLIAEKFHTAIKDHHRKNPNPDAAPPSPTLTIPDLALEFSRLSAAHPISPSTAR- 88
A+ +H++ + K + ++N + D + + A FS S+ P+T+R
Sbjct: 376 ANERHEIRSSKLSGTRRIGAKRNDDDDDS----LFAMETPAFRFSDESSDIVDKPATSRV 431
Query: 89 ---RVIEKCGAIRHGIPFYQSLAFFNWATSLKNFPSSPEPYIEMLDLAGKLRHFDLAWHL 145
IEK + +G F+ A + + ++ GKL ++ +
Sbjct: 432 EMEDRIEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQV 491
Query: 146 I------DSMKTRGVEITAETFSVLIRRYVRAGLAAEAVHAFNRMEDYGVAPDKVAVSIV 199
I D K+ + I T ++ + R A HA + PD VA +
Sbjct: 492 IEWLQRQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAM--LLQISSYPDMVAYRSI 549
Query: 200 VSSLCRKRRAEEAQSFFDSVKD----------------RFEPDVILYTSLIHGWCRAGKI 243
+L + +E D+++ R EPDV++Y ++++ + +
Sbjct: 550 AVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQW 609
Query: 244 ERAEEIFKDMKDAGIKPNVHTYSIVIDSLCRCGQITRAHDVFAEMIDAGCNPNAVTFNSL 303
E A + + +K G KP+ TY ++++ + C + H+ F +M + PNA+ + L
Sbjct: 610 EGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSI-PNALAYRVL 668
Query: 304 MRVHVKAGRTEKVLQVFNQMKRFNCAADTIGYNFLIECHCRDENLEEAVKVLNLMVKKGV 363
+ K G++++ + M+ Y L C C E + +L + +
Sbjct: 669 VNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVAN 728
Query: 364 APNSSTFNSIFGCIAKLHDVNGAHRMYAKMKELNCLPNTLTYNILMRMFAESKSIDMVLK 423
P T+ + ++ A ++ +MK++ C PN +T NI+++ + + + +
Sbjct: 729 KPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKV-CSPNLVTCNIMLKAYLQGGLFEEARE 787
Query: 424 LKKEMDEN------------QVEPNVNTYRILILMFCEKGHWNNAYKLMKEMV 464
L ++M E+ +V P+ T+ ++ E+ W++ +EM+
Sbjct: 788 LFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREML 840