Miyakogusa Predicted Gene

Lj1g3v2249550.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2249550.2 Non Chatacterized Hit- tr|I1EJB7|I1EJB7_AMPQE
Uncharacterized protein OS=Amphimedon queenslandica
PE,33.66,4e-19,seg,NULL; Thioredoxin-like,Thioredoxin-like fold; no
description,Thioredoxin-like fold; Thioredoxin_,CUFF.28736.2
         (229 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G20225.1 | Symbols:  | Thioredoxin superfamily protein | chr1...   233   8e-62
AT1G76020.1 | Symbols:  | Thioredoxin superfamily protein | chr1...   231   3e-61

>AT1G20225.1 | Symbols:  | Thioredoxin superfamily protein |
           chr1:7007966-7009318 REVERSE LENGTH=233
          Length = 233

 Score =  233 bits (594), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 109/198 (55%), Positives = 148/198 (74%)

Query: 30  ADYIPPAKTDGFVYLNRRSFNFDSILIEAFYDPLCPDSRDSWPPLKQALHDYGSGVSLVV 89
           A  IPPA+ DGF+Y   R  + D+ILIEA+ DP+CPD RD+W PLK A+  YGS V+LV+
Sbjct: 20  AQLIPPARRDGFLYPPGRKIDRDTILIEAYIDPVCPDCRDAWEPLKLAIDHYGSRVALVL 79

Query: 90  HLLPLPYHDNAYVASRALHDVNALNSSATFPLLELLFKDQEKFYGAQTRNLSRASIQEEF 149
           HL+PLP+HDNA+VASRALH V+ LN++ATF LLE +FK Q  FY +QT+ +SR ++ EE 
Sbjct: 80  HLIPLPFHDNAFVASRALHIVDTLNANATFNLLEGIFKHQTLFYNSQTQLMSRPAVVEEL 139

Query: 150 VKSATEVIGSSFYTSVKNGFNDSKTDHQTRISFKYAASRGVYGTPFFYVNGFLLPDVGDS 209
           +K  T  +G+S+++ +K+GF++SK+D  TR+SFKY+ SRGV  TP FYVNGF LP  G  
Sbjct: 140 IKLGTVTLGNSYHSPLKSGFSNSKSDLATRVSFKYSVSRGVSATPTFYVNGFELPGAGSP 199

Query: 210 IDYKTWKKIIDPLVGAEK 227
            DY+ W+  IDPLV  ++
Sbjct: 200 KDYEGWRDTIDPLVKPQE 217


>AT1G76020.1 | Symbols:  | Thioredoxin superfamily protein |
           chr1:28532243-28533542 REVERSE LENGTH=225
          Length = 225

 Score =  231 bits (589), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 119/198 (60%), Positives = 152/198 (76%)

Query: 30  ADYIPPAKTDGFVYLNRRSFNFDSILIEAFYDPLCPDSRDSWPPLKQALHDYGSGVSLVV 89
           A  +PP + DGFVY     F+ D+ILIEA++DP+CPDSRDSWPPLKQALH YGS V+L++
Sbjct: 19  AQLVPPVRQDGFVYPPGHRFDPDTILIEAYFDPVCPDSRDSWPPLKQALHHYGSRVALLL 78

Query: 90  HLLPLPYHDNAYVASRALHDVNALNSSATFPLLELLFKDQEKFYGAQTRNLSRASIQEEF 149
           HLLPLPYHDNAYV SRALH VN ++++ATF LLE  FK Q  FY AQT+ LSR ++ E+ 
Sbjct: 79  HLLPLPYHDNAYVTSRALHIVNTVHANATFSLLEGFFKHQSLFYNAQTQLLSRPAVVEKI 138

Query: 150 VKSATEVIGSSFYTSVKNGFNDSKTDHQTRISFKYAASRGVYGTPFFYVNGFLLPDVGDS 209
           V+  T  +G+S+ + +K+GF+D K+D  TR+SFKY+ASRGVYGTP FYVNGF+L D    
Sbjct: 139 VELGTVSLGNSYQSVLKSGFSDKKSDRATRVSFKYSASRGVYGTPTFYVNGFVLSDAASP 198

Query: 210 IDYKTWKKIIDPLVGAEK 227
            ++  WKKIIDPLV A +
Sbjct: 199 SNFGGWKKIIDPLVQAHE 216