Miyakogusa Predicted Gene

Lj1g3v2239520.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2239520.1 Non Chatacterized Hit- tr|B0X169|B0X169_CULQU
Putative uncharacterized protein OS=Culex
quinquefasci,35.5,4e-19,GCV_H,Glycine cleavage H-protein; SUBFAMILY
NOT NAMED,NULL; UNCHARACTERIZED,NULL; Single hybrid moti,CUFF.28727.1
         (208 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75980.1 | Symbols:  | Single hybrid motif superfamily protei...   290   4e-79

>AT1G75980.1 | Symbols:  | Single hybrid motif superfamily protein |
           chr1:28522936-28524302 REVERSE LENGTH=225
          Length = 225

 Score =  290 bits (743), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 134/190 (70%), Positives = 162/190 (85%), Gaps = 1/190 (0%)

Query: 17  CSEIERPQQRNEEDEEA-ELQKLLLPNVDELPLTPPSAVETNFVSYFALDFTKPGHDHYI 75
           C + ++ Q   +EDEE  EL+KLLL ++ ELP++PPSA + NFVSYF  DFTK GHD YI
Sbjct: 32  CDDQQKQQLATQEDEEEDELRKLLLSDIGELPISPPSATQVNFVSYFITDFTKSGHDQYI 91

Query: 76  YRHANGLCVIGLAPSHIAFKDEGGITAVDFNVGKSDRSGMKVTGKRKKNAQHLESNSALC 135
           YRHANGLCVIGLAP+HIAFKDEGGIT+VDFNVGKSDRS +KV+GKRKKNA   ESN+ALC
Sbjct: 92  YRHANGLCVIGLAPTHIAFKDEGGITSVDFNVGKSDRSVLKVSGKRKKNALRSESNTALC 151

Query: 136 KISTKNYSYIVRCCVKGSLLEVNQQLIKQPELLNVLADREGYIAIVMPKPADWLKVKDSL 195
           K+ST   +YIVRCCVKGSLLEVN++LIKQPELLN  ADREGYIAI+MP+PADW K K+SL
Sbjct: 152 KVSTAKDTYIVRCCVKGSLLEVNERLIKQPELLNSTADREGYIAIIMPRPADWTKNKESL 211

Query: 196 VSIQEYKKAR 205
           ++++EYK+ +
Sbjct: 212 ITLEEYKEKK 221