Miyakogusa Predicted Gene

Lj1g3v2156570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2156570.1 Non Chatacterized Hit- tr|I1LT34|I1LT34_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37731 PE,91.94,0,kdsB:
3-deoxy-D-manno-octulosonate
cytidylyltransf,3-deoxy-D-manno-octulosonate
cytidylyltransferase,CUFF.28648.1
         (289 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G53000.1 | Symbols: KDSB | Nucleotide-diphospho-sugar transfe...   444   e-125

>AT1G53000.1 | Symbols: KDSB | Nucleotide-diphospho-sugar
           transferases superfamily protein |
           chr1:19745330-19747133 REVERSE LENGTH=290
          Length = 290

 Score =  444 bits (1143), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 206/239 (86%), Positives = 227/239 (94%)

Query: 51  RFASSRFQGKPLIQILGKPMIQRTWERAKLAATLDHVVVATDDEKIAECCRQFGADVVMT 110
           R+ASSRF+GKPL+QILGKPMIQRTWER+KLA TLDH+VVATDDE+IAECCR FGADV+MT
Sbjct: 52  RYASSRFEGKPLVQILGKPMIQRTWERSKLATTLDHIVVATDDERIAECCRGFGADVIMT 111

Query: 111 AESCRNGAERCNEAVQKLGKKYDIVVNIQGDEPLIEPEIIDGIVKALQAAPDAVFSTAVT 170
           +ESCRNG ERCNEA++KL KKYD+VVNIQGDEPLIEPEIIDG+VKALQ  PDAVFSTAVT
Sbjct: 112 SESCRNGTERCNEALEKLEKKYDVVVNIQGDEPLIEPEIIDGVVKALQVTPDAVFSTAVT 171

Query: 171 SLKPVDANDPNRVKCVVDNRDYAIYFSRGLIPFNKSGKVNPHFPYLLHLGIQSYDAKFLK 230
           SLKP D  DPNRVKCVVDNR YAIYFSRGLIP+NKSGKVNP FPY+LHLGIQS+D+KFLK
Sbjct: 172 SLKPEDGLDPNRVKCVVDNRGYAIYFSRGLIPYNKSGKVNPDFPYMLHLGIQSFDSKFLK 231

Query: 231 IYSDLQPTPLQLEEDLEQLKVLENGYKMKVIKVDHDAHGVDTPEDVEKIESLMRERNLS 289
           +YS+LQPTPLQ EEDLEQLKVLENGYKMKVIKVDH+AHGVDTP+DVEKIESLMRERN+S
Sbjct: 232 VYSELQPTPLQQEEDLEQLKVLENGYKMKVIKVDHEAHGVDTPDDVEKIESLMRERNMS 290