Miyakogusa Predicted Gene

Lj1g3v2155490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2155490.1 Non Chatacterized Hit- tr|I1JCI9|I1JCI9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,49.5,2e-17,seg,NULL;
ZF_C3H1,Zinc finger, CCCH-type,CUFF.28643.1
         (418 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19860.1 | Symbols:  | Zinc finger C-x8-C-x5-C-x3-H type fami...   290   1e-78
AT5G66270.1 | Symbols:  | Zinc finger C-x8-C-x5-C-x3-H type fami...   125   6e-29
AT3G51180.1 | Symbols:  | Zinc finger C-x8-C-x5-C-x3-H type fami...   118   8e-27

>AT1G19860.1 | Symbols:  | Zinc finger C-x8-C-x5-C-x3-H type family
           protein | chr1:6891654-6894400 REVERSE LENGTH=413
          Length = 413

 Score =  290 bits (743), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 182/436 (41%), Positives = 252/436 (57%), Gaps = 44/436 (10%)

Query: 1   MRGSHRRVSWASDFNLCQVRLFLSDESPSQVGLNSQDHLQAKTSLLLHPGGAGSDDSLPP 60
           MR  H+RVSW  DF LCQVRLF+S++SPSQVG  SQDHLQAK+ L  HP    SDD+LPP
Sbjct: 1   MRALHKRVSWPPDFKLCQVRLFISEDSPSQVGSESQDHLQAKSPLASHP----SDDNLPP 56

Query: 61  GFEGTHASSQFEINLSQIPVISWTRPPKIVLNLTWQVVAGEESKEVEDQHKRELRVLEAI 120
           GF G  ++++ +I LS IP+I W    +I+L+  W+VVAG+ESKEVE Q++RELRVLEA 
Sbjct: 57  GFGGPFSANESQIKLSDIPLIKWKCSVQILLDREWKVVAGDESKEVEAQNERELRVLEAF 116

Query: 121 YPRISSIPSNPAVSVDVENSHHIDGQIPLIPITPIEDDDAVADTVSNV-SQSLEQPTGIL 179
           YP  SSIP NP+V  DVE+SHH D Q  +IPI P+EDDD   D+ S+  +QS        
Sbjct: 117 YPGASSIPPNPSVPADVEDSHHDDQQTIVIPILPVEDDDIAMDSASDFPTQSGVDVGTEP 176

Query: 180 KVSSSATNMHLAGGLGSDVXXXXXXLTNIVKSNERGNLIDHELLKNILRSPEVIEKLVRD 239
            ++   T+       G D+      L+ I  S E+G++ID +LL  IL +P+++E LV +
Sbjct: 177 SITDENTSTSSTLPAGPDI---MAALSAISNSKEQGSMIDQDLLIKILSNPKLVENLVAN 233

Query: 240 YGVTNN------SQYVHNVGPSSAAFSRPPIATNQGENALLSSVTSSYIHPTGGQAASVS 293
            G   +      S Y  +   ++   +  PI++N G+      +T  +I P      +  
Sbjct: 234 RGSAGSVSSNTSSLYSSSTHEANGVVTTAPISSN-GQFYAQPPIT--HIPPMAYTPHAPQ 290

Query: 294 TQWXXXXXXXXXXXXXXXXXXXKKDANYYKSLIQQHGGDKQETFP-----YSSSNQI--- 345
            Q                     +DA+YYK+LIQQHGGD+QET P     Y  + Q    
Sbjct: 291 DQ-------------PNYGAPPARDASYYKNLIQQHGGDRQETPPVQHLGYRYNLQPGGG 337

Query: 346 QQPVNQYETAYNPRAKALRPKIMKPCIFFNSSRGCRNGANCSYQHDAS-FQQRGS----- 399
             P     +  N R +  +PKIMK C++FNS+RGCR+GANC YQHDA+ +Q R       
Sbjct: 338 PNPEMVNSSNNNQRPRDSKPKIMKACMYFNSARGCRHGANCMYQHDATPYQPRNLNNGNI 397

Query: 400 TVSGIQSSKRMKLDNE 415
             S +Q++KRM+ D +
Sbjct: 398 NTSDMQNAKRMRFDRD 413


>AT5G66270.1 | Symbols:  | Zinc finger C-x8-C-x5-C-x3-H type family
           protein | chr5:26473507-26475566 REVERSE LENGTH=449
          Length = 449

 Score =  125 bits (314), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 119/232 (51%), Gaps = 44/232 (18%)

Query: 7   RVSWASDFNLCQVRLFLSDESPSQVGLNSQDHLQAKTSLLLHPGGAGSDDSLPPGFEGTH 66
           RVSWASD  LCQV+LFLSD+ P +V  N                       LPPGFE T 
Sbjct: 9   RVSWASDSMLCQVKLFLSDDCPVKVASN-----------------------LPPGFEATD 45

Query: 67  ASSQFEINLSQIPVISWTRPPKIVLNLTWQVVAGEESKEVEDQHKRELRVLEAIYPRISS 126
            +++  I  S IP I W RPP  VL+    V +G +S E   ++ R  +VLEA YP  S 
Sbjct: 46  YATKRII--SHIPRIKWKRPPLFVLDDALLVGSGGKSIETRSENLRISKVLEAFYPHRSV 103

Query: 127 IPSNPAVSVDVENSHHIDGQIPLIPITPIEDD-DAVADTVSNVSQSLEQPTGILKVSSSA 185
           IPS P++++ VE  H+ DG+ P IP+T +ED+ DA A++    S S E P  +       
Sbjct: 104 IPSRPSLTLAVEEEHYDDGKTPNIPLTHVEDERDAAAES----SHSFEAPAAV------- 152

Query: 186 TNMHLAGGLGSDVXXXXXXLTNIVKSNERGNLIDHELLKNILRSPEVIEKLV 237
                  GLG ++            + E+G+ +D +LL  +L  P+++E L+
Sbjct: 153 ------SGLGPELSLLASA-ALSALTKEQGSQVDPDLLVKLLSDPKIVENLI 197



 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 11/77 (14%)

Query: 317 KDANYYKSLIQQHGGDKQETFPYSSSNQIQQPVNQYETAYNPRAKALRPKIMKPCIFFNS 376
           KD +Y+K+LI++HG  K  T   + +N  +  V+          K ++ +I KPC++FN 
Sbjct: 362 KDLDYFKNLIREHGAVKPAT---TETNNYKGRVDH--------KKIVKVRIQKPCMYFNR 410

Query: 377 SRGCRNGANCSYQHDAS 393
            +GCR G +C Y HD+S
Sbjct: 411 PKGCRMGESCLYLHDSS 427


>AT3G51180.1 | Symbols:  | Zinc finger C-x8-C-x5-C-x3-H type family
           protein | chr3:19013720-19016042 FORWARD LENGTH=521
          Length = 521

 Score =  118 bits (295), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 91/247 (36%), Positives = 129/247 (52%), Gaps = 19/247 (7%)

Query: 2   RGSHRRVSWASDFNLCQVRLFLSDESPSQVGLNSQDHLQAKTSLLLHPGGAGSDDSLPPG 61
           R    RVSW     LCQV++F +++SP+ V    Q H         +P        LPPG
Sbjct: 6   RSKKPRVSWPPGPKLCQVKVFRTEDSPANVASQPQRHS--------YPSRKPRGPDLPPG 57

Query: 62  FEGTHASSQFEINLSQIPVISWTRPP-KIVLNLTWQVVAGEESKEVEDQHKRELRVLEAI 120
           FEG H +   + N+S IP I W RPP K  +N TW V  G  S E ++++ R  +VLEAI
Sbjct: 58  FEGNHYA--VKPNVSNIPRIKWKRPPPKFSVNDTWLVGCGGGSSEWQNENLRISKVLEAI 115

Query: 121 YPRISSIPSNPAVSVDVENSHHIDGQIPLIPITPIEDDDAVADTVSNVSQSLEQPT---- 176
           YP  S+IPS P+VS  VE     D + P I +TPIED+   +   S+ S+     T    
Sbjct: 116 YPHRSAIPSRPSVSPAVEAECFDDSKTPAIRLTPIEDESESSSEESSNSKVESGVTANKQ 175

Query: 177 GILKVSS-SATNMHLAG--GLGSD-VXXXXXXLTNIVKSNERGNLIDHELLKNILRSPEV 232
           G L+     +T   ++G  GL  D        LT ++K+ E+G+L+D ELL   L  P++
Sbjct: 176 GQLETKPLCSTQEQVSGLTGLAPDLSLAASAALTALMKTKEQGSLVDTELLIKFLSDPKL 235

Query: 233 IEKLVRD 239
           I+ L+ D
Sbjct: 236 IKNLITD 242



 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 14/96 (14%)

Query: 317 KDANYYKSLIQQHGGDKQETFPYSSSNQIQQPVNQYETAYNPRAKALRPKIMKPCIFFNS 376
           K  +Y+K+LI++HG D  ET  Y S   I          +N R      KI + CI+F +
Sbjct: 432 KGLDYFKNLIREHGTDNHETNQYHSQTGI----------FNGRIDNNN-KIHQQCIYFGT 480

Query: 377 SRGCRNGANCSYQHDASFQQRGSTVSGIQSSKRMKL 412
           + GC  G +C+Y HD   + R +  +    +KRMK 
Sbjct: 481 ANGCNMGDSCTYVHD---RYRPNFEAAAPRAKRMKF 513