Miyakogusa Predicted Gene

Lj1g3v2155480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2155480.1 Non Chatacterized Hit- tr|C0PPM1|C0PPM1_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,34.46,0.00000000000002,seg,NULL; IQ,IQ motif, EF-hand binding site;
DUF4005,Domain of unknown function DUF4005,CUFF.28640.1
         (658 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19870.1 | Symbols: iqd32 | IQ-domain 32 | chr1:6895400-68985...   161   1e-39
AT4G14750.1 | Symbols: IQD19 | IQ-domain 19 | chr4:8470449-84719...    49   8e-06

>AT1G19870.1 | Symbols: iqd32 | IQ-domain 32 | chr1:6895400-6898539
           REVERSE LENGTH=794
          Length = 794

 Score =  161 bits (408), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 134/387 (34%), Positives = 187/387 (48%), Gaps = 69/387 (17%)

Query: 292 KASNPVFFAAQSKFEELSSMSNLGRTSSLPYQDAASEFESQGDTSFVVTDTVHRSKELTS 351
           K SNP F AAQSKFEEL+S +   +  +L  +D       +G T     DT +  K+ + 
Sbjct: 457 KVSNPSFIAAQSKFEELTSSTGSNKAMTLSSKDDV--LGEEGKTDIDSPDTTNTIKDHSL 514

Query: 352 ENPGPHLSRVSGSECGTELSITSTLDSPGVSEVGAMENERGAKDLVEGTGNLENTIKHDN 411
           E+  P  + +SGSECGTELS+TS+LD+     +    +  GA+  VE     ++T K D 
Sbjct: 515 EDVTP--AELSGSECGTELSVTSSLDT-----LEKKSDAEGAEPRVEAKLLEDDTFKTD- 566

Query: 412 EGNVPCTLPASDLATSVSNQSEIVDDISVNMVLSVAAVDSGKPTIETETNASDFQKEQAE 471
                              Q+E+++ I V    S+  V+  K  +E   +  +      E
Sbjct: 567 -------------------QAELIE-IDVKDATSMGTVEDPKEKVENAKDEVEISATHHE 606

Query: 472 AVLHDLKSSPDASPR------------------SHVTVPESQGTPSSQVSVKPXXXXXXX 513
            V+    S+PD+  R                  + +T+ ESQ TP+SQ S          
Sbjct: 607 PVI----STPDSKKRRAEDESGPQAYALSEGALTPMTITESQATPASQASSSVKARKGKS 662

Query: 514 XXXXXXXXXXXXXNSPANANHDSGSRGSGEQLPKDQRNDGKRRNSFGSVKPDHIDQEPKD 573
                           ++   + G+  + EQ    ++  G RR SFG       DQE ++
Sbjct: 663 EKSGSSQKRKVSKKITSSPKQEIGTGEATEQEEGKEQKSG-RRTSFG------YDQEARE 715

Query: 574 NTSSNNSLPRFMQATQSARAKLNANNSPRSSPDVHEGD-VQVIKRHSLPGST-GRQVSPR 631
           ++   NSLPRFMQ TQSA+AK+  +NSPRSSPD+ E D V   KRHSLPG T G+QVSPR
Sbjct: 716 SSGGKNSLPRFMQPTQSAKAKVQEHNSPRSSPDLQERDVVSAKKRHSLPGVTNGKQVSPR 775

Query: 632 IQRSMSQAQQSTKANSEQSPQERKWLR 658
           IQRS SQAQQ TK        +RKW R
Sbjct: 776 IQRSASQAQQGTK--------DRKWQR 794



 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 15/67 (22%)

Query: 1  MGKS-TSSCFKLITCGGGD---------AVENHASQFQDSTDKRGWSFRKKSSTHRVLSN 50
          MG+S  SSC +LI+C GGD         A+EN +S      DKRGWSFRKKS   R L  
Sbjct: 1  MGRSPASSCLRLISCSGGDDTSADPNSTALENKSS-----GDKRGWSFRKKSGKQRGLIT 55

Query: 51 TATPSST 57
          +    +T
Sbjct: 56 SVVSETT 62


>AT4G14750.1 | Symbols: IQD19 | IQ-domain 19 | chr4:8470449-8471903
           FORWARD LENGTH=387
          Length = 387

 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 16/163 (9%)

Query: 1   MGKSTSSCFKLITCGGGDAVENHASQ----FQDST-----DKRGWSFRKKSSTHRVLSNT 51
           MGK TS  F+ +  G  +  + H  Q    F  S      +KR WSFR+ S+T       
Sbjct: 1   MGK-TSKWFRSLLTGKKERTKEHIIQSECVFTSSIPGTPKEKRRWSFRRSSATG--PPPP 57

Query: 52  ATPSSTANKESSQSSNFNFQPLPEPNLVNKISTPNQKPQVSETNVIDDAESNKVDVKNPP 111
           A   +  +            PL +P +V  +   N+  Q+   +  +  E   + ++   
Sbjct: 58  ACAITLKDSPPPPPPPPPPPPLQQPFVVEIVD--NEDEQIKNVSAEEIEEFAAIKIQACY 115

Query: 112 ESSAATAQRELLQVESIVKLQGAIRGYLVRKNSVGTLHCVQAV 154
            S    A++ L  ++ +VKLQ  +RG+LVRK +  TL C+QA+
Sbjct: 116 RSH--LARKALRALKGLVKLQALVRGHLVRKQATATLRCMQAL 156