Miyakogusa Predicted Gene

Lj1g3v2141140.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2141140.3 Non Chatacterized Hit- tr|H3GKH9|H3GKH9_PHYRM
Uncharacterized protein OS=Phytophthora ramorum
GN=fge,41.67,0.000001,UNCHARACTERIZED,Protein of unknown function
DUF726; seg,NULL,CUFF.28786.3
         (318 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G36210.3 | Symbols:  | Protein of unknown function (DUF726) |...   192   2e-49
AT2G18100.1 | Symbols:  | Protein of unknown function (DUF726) |...   179   2e-45
AT4G36210.2 | Symbols:  | Protein of unknown function (DUF726) |...   124   9e-29
AT4G36210.1 | Symbols:  | Protein of unknown function (DUF726) |...   124   1e-28

>AT4G36210.3 | Symbols:  | Protein of unknown function (DUF726) |
           chr4:17130354-17134302 FORWARD LENGTH=672
          Length = 672

 Score =  192 bits (489), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/337 (35%), Positives = 172/337 (51%), Gaps = 38/337 (11%)

Query: 9   LPPTHRYXXXXXXXXXXHHSQIHQSPTTAQNAA------------------SVSDDPELW 50
           L PT RY          + +QI+Q+      AA                  SVSDDP LW
Sbjct: 8   LTPTQRYAAGALFAIALNQAQINQTQPLGTPAAEDDDGGDEERRSNCSSGDSVSDDPSLW 67

Query: 51  IHDNFGLLSPVLRFLGVDDQSSNGLKETAGSSSQFRHHLGSFLKLLAEESDANSSERLDK 110
           +H+  GLL PV R L +D  +  GL++TA  SS  +HH+G+F +LL+EE++  S+E +++
Sbjct: 68  VHETSGLLRPVFRCLEIDSPAWLGLEQTA-CSSPAKHHIGAFTRLLSEEANDASAEMVEQ 126

Query: 111 EAALTKAVDAMXXXXXXXXXXXXXXXXXXXHEQKSQDYLCNTTAPPVVEPHSD-SKTKDS 169
           E AL KA DAM                   +E + ++       P V     D  K KD 
Sbjct: 127 EMALAKAADAMVHSIQCSVSIDAKKEKHQEYENECRE---KYAVPEVKSKDVDLDKEKDK 183

Query: 170 ------------ESSALLPQQKQASTELENVTLEKPLEEASLISYQRKVTVLYALVSACV 217
                       E+  ++         LEN   EK +EE +L+S+QRK+ VLY L+SAC+
Sbjct: 184 KEAAESAAREGLEAGVVIIDGSHKPEVLEN---EKSVEEVTLLSHQRKINVLYELLSACL 240

Query: 218 ADTAEVDNKCCRSRQGYDARHRVSLRLIATWLGVKWNEMEAMESMVAFSLMNSLSEAGAK 277
           +D    D KC R R+GYDARHRV+LRL+ATW  ++W ++EA+E+MVA S M     A  K
Sbjct: 241 SDKHHEDKKCKRCRKGYDARHRVALRLLATWFNIEWIKVEAIETMVACSAMAIQKSAEMK 300

Query: 278 EDESIGSENNWDKWKRXXXXXXXXXXXXXLMAITGGI 314
            ++++    +W KWKR             LMAITGG+
Sbjct: 301 GEDNLTPTTSWAKWKRGGIIGAAAITGGTLMAITGGL 337


>AT2G18100.1 | Symbols:  | Protein of unknown function (DUF726) |
           chr2:7867929-7871337 FORWARD LENGTH=656
          Length = 656

 Score =  179 bits (455), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/323 (35%), Positives = 171/323 (52%), Gaps = 24/323 (7%)

Query: 9   LPPTHRYXXXXXXXXXXHHSQIHQS-----PTTAQ-------NAASVSDDPELWIHDNFG 56
           L P+ RY          + +QI QS     P T         ++  +SD+ +LW+H+  G
Sbjct: 8   LTPSQRYAASALFAIALNQAQISQSKPLGIPATGSTGEPISSDSDPISDEADLWVHEVSG 67

Query: 57  LLSPVLRFLGVDDQSSNGLKETAGSSSQFRHHLGSFLKLLAEESDANSSER---LDKEAA 113
           LL PVLR L +D  + +GL+E A +S+Q + H+G+F+KLL+E+   +  +    ++KE A
Sbjct: 68  LLRPVLRCLQIDSSAWHGLEEIA-ASTQAKDHIGAFIKLLSEDVSDDDDDSSEMVEKETA 126

Query: 114 LTKAVDAMXXXXXXXXXXXXXXXXX-XXHEQKSQDYLCNTTAPPVVEPHSDSKTKDSESS 172
           L KA DAM                     E + +D         V E  S ++ K++ES 
Sbjct: 127 LAKAADAMDQNIRSSSLSVESKMEKHVEFENECRDKYS------VPEAQSGAEVKETESH 180

Query: 173 ALLPQQKQASTELENVTLEKPLEEASLISYQRKVTVLYALVSACVADTAEVDNKCCRSRQ 232
               + +     L  V  EKP+ E +L+S++RK+ VLY L+SAC+AD  E +  C R R+
Sbjct: 181 G-EGEIRDGGHNLGIVEHEKPVGEVALLSHERKINVLYELLSACLADKHEENEICTRRRK 239

Query: 233 GYDARHRVSLRLIATWLGVKWNEMEAMESMVAFSLMNSLSEAGAKEDESIGSENNWDKWK 292
           GYDARH V+LRL+ATW   +W +MEA+E+M A S M     +G KE+ES+   + W KWK
Sbjct: 240 GYDARHHVALRLLATWFDFQWIKMEAVETMSACSAMALQKSSGNKEEESLSPNSEWAKWK 299

Query: 293 RXXXXXXXXXXXXXLMAITGGIC 315
           R             LMAITGG+ 
Sbjct: 300 RGGIVGAAALTGGTLMAITGGLA 322


>AT4G36210.2 | Symbols:  | Protein of unknown function (DUF726) |
           chr4:17130951-17134302 FORWARD LENGTH=516
          Length = 516

 Score =  124 bits (311), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 62/130 (47%), Positives = 85/130 (65%), Gaps = 3/130 (2%)

Query: 185 LENVTLEKPLEEASLISYQRKVTVLYALVSACVADTAEVDNKCCRSRQGYDARHRVSLRL 244
           LEN   EK +EE +L+S+QRK+ VLY L+SAC++D    D KC R R+GYDARHRV+LRL
Sbjct: 89  LEN---EKSVEEVTLLSHQRKINVLYELLSACLSDKHHEDKKCKRCRKGYDARHRVALRL 145

Query: 245 IATWLGVKWNEMEAMESMVAFSLMNSLSEAGAKEDESIGSENNWDKWKRXXXXXXXXXXX 304
           +ATW  ++W ++EA+E+MVA S M     A  K ++++    +W KWKR           
Sbjct: 146 LATWFNIEWIKVEAIETMVACSAMAIQKSAEMKGEDNLTPTTSWAKWKRGGIIGAAAITG 205

Query: 305 XXLMAITGGI 314
             LMAITGG+
Sbjct: 206 GTLMAITGGL 215


>AT4G36210.1 | Symbols:  | Protein of unknown function (DUF726) |
           chr4:17130951-17134302 FORWARD LENGTH=550
          Length = 550

 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/130 (47%), Positives = 85/130 (65%), Gaps = 3/130 (2%)

Query: 185 LENVTLEKPLEEASLISYQRKVTVLYALVSACVADTAEVDNKCCRSRQGYDARHRVSLRL 244
           LEN   EK +EE +L+S+QRK+ VLY L+SAC++D    D KC R R+GYDARHRV+LRL
Sbjct: 89  LEN---EKSVEEVTLLSHQRKINVLYELLSACLSDKHHEDKKCKRCRKGYDARHRVALRL 145

Query: 245 IATWLGVKWNEMEAMESMVAFSLMNSLSEAGAKEDESIGSENNWDKWKRXXXXXXXXXXX 304
           +ATW  ++W ++EA+E+MVA S M     A  K ++++    +W KWKR           
Sbjct: 146 LATWFNIEWIKVEAIETMVACSAMAIQKSAEMKGEDNLTPTTSWAKWKRGGIIGAAAITG 205

Query: 305 XXLMAITGGI 314
             LMAITGG+
Sbjct: 206 GTLMAITGGL 215