Miyakogusa Predicted Gene
- Lj1g3v2140880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2140880.1 CUFF.28620.1
(495 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 488 e-138
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 7e-65
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 3e-49
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 5e-47
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 9e-43
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 4e-40
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 7e-36
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 2e-34
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 143 2e-34
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 2e-33
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 9e-33
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 5e-32
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 7e-32
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 7e-32
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 3e-31
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 7e-31
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 132 7e-31
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 3e-30
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 128 8e-30
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 125 6e-29
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 2e-28
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 2e-28
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 6e-28
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 8e-28
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 9e-28
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 9e-28
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 9e-28
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 5e-27
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 1e-26
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 5e-26
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 5e-26
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 7e-26
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 9e-26
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 112 7e-25
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 111 1e-24
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 110 2e-24
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 3e-24
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 4e-24
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 6e-24
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 106 3e-23
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 105 6e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 105 7e-23
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 1e-22
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 103 2e-22
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 9e-22
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 98 1e-20
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 97 2e-20
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 97 2e-20
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 4e-20
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 96 7e-20
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 92 7e-19
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 6e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 8e-18
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 89 8e-18
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 86 9e-17
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 84 3e-16
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 80 3e-15
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 78 1e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 78 2e-14
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 76 5e-14
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 76 6e-14
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 75 1e-13
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 66 5e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 65 7e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 8e-11
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 9e-11
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 64 2e-10
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 64 2e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 64 4e-10
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 62 8e-10
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 62 1e-09
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 60 3e-09
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 60 5e-09
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 59 7e-09
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 58 2e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 57 3e-08
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 57 3e-08
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 5e-08
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 56 6e-08
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 55 9e-08
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 54 2e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 53 5e-07
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 52 7e-07
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 51 2e-06
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 488 bits (1256), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/443 (54%), Positives = 306/443 (69%), Gaps = 7/443 (1%)
Query: 30 PPLFTRRFLHSQPEHAAGAGAFVQNLLKFRRDKPTDQVERALDLCGFXXXXXXXXXXXRR 89
P F RF + + +A V N++K R ++++R LD CG R
Sbjct: 62 PDKFPNRFNDDKDKQSA---LDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNR 118
Query: 90 HRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNE 149
+RSDWKPA + K + +S + NEILD+LGKM RFEE HQVFDEMS R+G VNE
Sbjct: 119 NRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNE 178
Query: 150 DTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS 209
T+ LL R+AAAHKV+EA+ +F R++FG+D DL AF LLMWLCRYKHVE AETLF S
Sbjct: 179 KTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCS 238
Query: 210 KAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXX 269
+ REF DIK N+ILNGWCVLGN HEAKR WKDI+ASKCRPD+ +Y T I
Sbjct: 239 RRREFGC--DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKG 296
Query: 270 XXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVAT 329
+R MW+ N PDV ICN +IDALCFKKR+PEALEVF+++ E+G +PNV T
Sbjct: 297 KLGKAMELYRAMWDTRRN--PDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVT 354
Query: 330 YNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMER 389
YNSL+KHLCKIRR EKV+ELVE+ME K GSC PN VT+S LL + ++V VLERM +
Sbjct: 355 YNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAK 414
Query: 390 NGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKD 449
N C ++ D+YNL+ RLY++WD ++ +R+ W EMER+G GPD+R+YTI IHG + GK+ +
Sbjct: 415 NKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGE 474
Query: 450 AMRYFREMTSKGMVAEPRTEKLV 472
A+ YF+EM SKGMV EPRTE L+
Sbjct: 475 ALSYFQEMMSKGMVPEPRTEMLL 497
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 227/428 (53%), Gaps = 11/428 (2%)
Query: 52 VQNLLKFRRDKPTDQVE--RALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASKADS 109
V + K +D +D+ E L+ C R R+DW+ A FF WA K
Sbjct: 97 VGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQG 156
Query: 110 YAPTSRVCNEILDILGKMSRFEELHQVFDEM-SHREGLVNEDTFSTLLRRFAAAHKVEEA 168
Y + R + ++ ILGKM +F+ + DEM LVN T ++R++ A H V +A
Sbjct: 157 YVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKA 216
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
I+ F+ ++F L++ +D F++LL LCRYK+V DA L ++ D K++N++LN
Sbjct: 217 INTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPF--DAKSFNIVLN 274
Query: 229 GWC-VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCN 287
GWC V+G+ EA+RVW ++ + D+ +Y++ I F M E C
Sbjct: 275 GWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKE-C- 332
Query: 288 CKPDVVICNCIIDALCFKKRVPEALEVFQDMKE-RGCEPNVATYNSLIKHLCKIRRMEKV 346
+PD + N ++ AL V EA + + M+E +G EPNV TYNSLIK LCK R+ E+
Sbjct: 333 IEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEA 392
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLY 406
++ ++M K P TY + L+ EEV +L +M + GC + + Y +++R
Sbjct: 393 KQVFDEMLEK--GLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKL 450
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEP 466
+W + D + WDEM+ GPD SY +MIHG + NGK+++A Y++EM KGM
Sbjct: 451 CRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNE 510
Query: 467 RTEKLVIS 474
E ++ S
Sbjct: 511 NVEDMIQS 518
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 200/394 (50%), Gaps = 10/394 (2%)
Query: 90 HRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEM-SHREGLVN 148
+ +DW+ AL FFNW + + T+ N ++DILGK FE + + M + E + N
Sbjct: 57 YSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPN 116
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
TF + +R+ AH V+EAI + + F L D +F L+ LC +KHV +AE L
Sbjct: 117 HVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEELCF 175
Query: 209 SK---AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXX 265
K F + + K N+IL GW LG + K WK + DLF+Y+ ++
Sbjct: 176 GKNVIGNGFSVS-NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIM 234
Query: 266 XXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEP 325
++ M + K DVV N +I A+ + V + VF++M+ERGCEP
Sbjct: 235 CKSGKPWKAVKLYKEM--KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEP 292
Query: 326 NVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLE 385
NVAT+N++IK LC+ RM Y ++++M ++ C P+++TY CL + L+ P E+ +
Sbjct: 293 NVATHNTIIKLLCEDGRMRDAYRMLDEMPKR--GCQPDSITYMCLFSRLEKPSEILSLFG 350
Query: 386 RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENG 445
RM R+G D Y +++R + +W + W M+ +G PD +Y +I + G
Sbjct: 351 RMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKG 410
Query: 446 KMKDAMRYFREMTSKGMVAEPRTEKLVISMNSPL 479
+ A Y EM +G+ R E + S++ L
Sbjct: 411 MLDMAREYEEEMIERGLSPRRRPELVEKSLDETL 444
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 192/378 (50%), Gaps = 12/378 (3%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R R KPA FF WA++ +A SR N ++ IL K +FE + V +EM + GL+
Sbjct: 170 RFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTK-GLLT 228
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+TF+ ++ FAAA + ++A+ +F +++ + ++ LL L R K ++A+ LF
Sbjct: 229 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD 288
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXX 268
F ++ T+ V+LNGWC + N EA R+W D++ +PD+ + +
Sbjct: 289 KLKERFT--PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRS 346
Query: 269 XXXXXXXXXFRGMWNEG-CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
F M ++G C P+V +I C + + A+E F DM + G +P+
Sbjct: 347 MKKSDAIKLFHVMKSKGPC---PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVL 384
A Y LI ++++ VYEL+++M+ K P+ TY+ L+ + K PE +
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHP--PDGKTYNALIKLMANQKMPEHGTRIY 461
Query: 385 ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYEN 444
+M +N S +N++++ Y N + R WDEM + G PD SYT++I G
Sbjct: 462 NKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISE 521
Query: 445 GKMKDAMRYFREMTSKGM 462
GK ++A RY EM KGM
Sbjct: 522 GKSREACRYLEEMLDKGM 539
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
K V NC++D+L K EA +F +KER PN+ TY L+ C++R + +
Sbjct: 261 KIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAAR 319
Query: 349 LVEDM--ERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLY 406
+ DM K + + V LL S+K + + + M+ G + Y +++R +
Sbjct: 320 IWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK-LFHVMKSKGPCPNVRSYTIMIRDF 378
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEP 466
K + + + +D+M +G PD YT +I G K+ +EM KG +
Sbjct: 379 CKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 438
Query: 467 RTEKLVISM 475
+T +I +
Sbjct: 439 KTYNALIKL 447
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 192/378 (50%), Gaps = 12/378 (3%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R R KPA FF WA++ +A SR N ++ IL K +FE + V +EM + GL+
Sbjct: 169 RFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTK-GLLT 227
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+TF+ ++ FAAA + ++A+ +F +++ + ++ LL L R K ++A+ LF
Sbjct: 228 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD 287
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXX 268
F ++ T+ V+LNGWC + N EA R+W D++ +PD+ + +
Sbjct: 288 KLKERFT--PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRS 345
Query: 269 XXXXXXXXXFRGMWNEG-CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
F M ++G C P+V +I C + + A+E F DM + G +P+
Sbjct: 346 MKKSDAIKLFHVMKSKGPC---PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 402
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVL 384
A Y LI ++++ VYEL+++M+ K P+ TY+ L+ + K PE +
Sbjct: 403 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHP--PDGKTYNALIKLMANQKMPEHGTRIY 460
Query: 385 ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYEN 444
+M +N S +N++++ Y N + R WDEM + G PD SYT++I G
Sbjct: 461 NKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISE 520
Query: 445 GKMKDAMRYFREMTSKGM 462
GK ++A RY EM KGM
Sbjct: 521 GKSREACRYLEEMLDKGM 538
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
K V NC++D+L K EA +F +KER PN+ TY L+ C++R + +
Sbjct: 260 KIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAAR 318
Query: 349 LVEDM--ERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLY 406
+ DM K + + V LL S+K + + + M+ G + Y +++R +
Sbjct: 319 IWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK-LFHVMKSKGPCPNVRSYTIMIRDF 377
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEP 466
K + + + +D+M +G PD YT +I G K+ +EM KG +
Sbjct: 378 CKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 437
Query: 467 RTEKLVISM 475
+T +I +
Sbjct: 438 KTYNALIKL 446
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 192/378 (50%), Gaps = 12/378 (3%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R R KPA FF WA++ +A SR N ++ IL K +FE + V +EM + GL+
Sbjct: 170 RFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTK-GLLT 228
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+TF+ ++ FAAA + ++A+ +F +++ + ++ LL L R K ++A+ LF
Sbjct: 229 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD 288
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXX 268
F ++ T+ V+LNGWC + N EA R+W D++ +PD+ + +
Sbjct: 289 KLKERFT--PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRS 346
Query: 269 XXXXXXXXXFRGMWNEG-CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
F M ++G C P+V +I C + + A+E F DM + G +P+
Sbjct: 347 RKKSDAIKLFHVMKSKGPC---PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVL 384
A Y LI ++++ VYEL+++M+ K P+ TY+ L+ + K PE +
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHP--PDGKTYNALIKLMANQKMPEHATRIY 461
Query: 385 ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYEN 444
+M +N S +N++++ Y N + R W+EM + G PD SYT++I G
Sbjct: 462 NKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGE 521
Query: 445 GKMKDAMRYFREMTSKGM 462
GK ++A RY EM KGM
Sbjct: 522 GKSREACRYLEEMLDKGM 539
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 6/190 (3%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
K V NC++D+L K EA +F +KER PN+ TY L+ C++R + +
Sbjct: 261 KIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAAR 319
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
+ DM + P+ V ++ +L L + + + M+ G + Y +++R
Sbjct: 320 IWNDMIDQ--GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
+ K + + + +D+M +G PD YT +I G K+ +EM KG +
Sbjct: 378 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 437
Query: 466 PRTEKLVISM 475
+T +I +
Sbjct: 438 GKTYNALIKL 447
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 197/383 (51%), Gaps = 11/383 (2%)
Query: 100 FFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHRE-GLVNEDTFSTLLRR 158
FF WA+K Y + VC ++ IL KM +F + + +EM L+ + F L+RR
Sbjct: 117 FFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRR 176
Query: 159 FAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHR 218
FA+A+ V++A+ + ++GL+ D F LL LC+ V++A +F +F
Sbjct: 177 FASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFP--P 234
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXF 278
+++ + +L GWC G EAK V + + PD+ + +
Sbjct: 235 NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLM 294
Query: 279 RGMWNEGCNCKPDVVICNCIIDALC-FKKRVPEALEVFQDMKERGCEPNVATYNSLIKHL 337
M G +P+V +I ALC +KR+ EA+ VF +M+ GCE ++ TY +LI
Sbjct: 295 NDMRKRGF--EPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGF 352
Query: 338 CKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE---EVPGVLERMERNGCSL 394
CK ++K Y +++DM RKKG MP+ VTY ++ + + E E ++E+M+R GC
Sbjct: 353 CKWGMIDKGYSVLDDM-RKKG-VMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHP 410
Query: 395 SDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYF 454
IYN+V+RL K + W+EME NG P ++ IMI+G G + +A +F
Sbjct: 411 DLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHF 470
Query: 455 REMTSKGMVAEPRTEKLVISMNS 477
+EM S+G+ + P+ L +N+
Sbjct: 471 KEMVSRGIFSAPQYGTLKSLLNN 493
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 190/384 (49%), Gaps = 10/384 (2%)
Query: 100 FFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHRE-GLVNEDTFSTLLRR 158
FF WA+K Y + V ++ IL KM +F + + +EM L+ + F L++R
Sbjct: 133 FFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQR 192
Query: 159 FAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHR 218
FA+A V++AI + +FG + D F LL LC++ V+DA LF F +
Sbjct: 193 FASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV-- 250
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXF 278
+++ + +L GWC +G EAK V + + PD+ Y +
Sbjct: 251 NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLL 310
Query: 279 RGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLC 338
R M G +P+ +I ALC R+ EA++VF +M+ CE +V TY +L+ C
Sbjct: 311 RDMRRRGF--EPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFC 368
Query: 339 KIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMER-NGCSLSDD 397
K +++K Y +++DM +K MP+ +TY ++ + + E LE ME+ D
Sbjct: 369 KWGKIDKCYIVLDDMIKK--GLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPD 426
Query: 398 --IYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFR 455
IYN+V+RL K + W+EME NG P ++ IMI+G G + +A +F+
Sbjct: 427 IGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFK 486
Query: 456 EMTSKGMVAEPRTEKLVISMNSPL 479
EM ++G+ + + L + +N+ L
Sbjct: 487 EMVTRGLFSVSQYGTLKLLLNTVL 510
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 203/427 (47%), Gaps = 9/427 (2%)
Query: 38 LHSQPEHAAGAGAFVQNLLKFRRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWKPA 97
L+S E +N+ K P ++ ALD G R R+
Sbjct: 58 LYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLT 117
Query: 98 LVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLR 157
FF W+ K Y + R + +++ K+ +++ + + + M ++ ++N +TF ++R
Sbjct: 118 YRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAM-RKKKMLNVETFCIVMR 176
Query: 158 RFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLH 217
++A A KV+EAI F E++ L +L AF LL LC+ K+V A+ +F + F
Sbjct: 177 KYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFT-- 234
Query: 218 RDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXX 277
D KT++++L GW N +A+ V+++++ + C PD+ TY+ +
Sbjct: 235 PDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGI 294
Query: 278 FRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHL 337
R M + CKP I + ++ + R+ EA++ F +M+ G + +VA +NSLI
Sbjct: 295 VRSM--DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 352
Query: 338 CKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL--KGPEEVPGVLERMERNGCSLS 395
CK RM+ VY ++++M+ K PN+ + + +L L +G ++ + R C
Sbjct: 353 CKANRMKNVYRVLKEMKSK--GVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPD 410
Query: 396 DDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFR 455
D Y +V++++ + + K W M + G P +++++I+G E + A
Sbjct: 411 ADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLE 470
Query: 456 EMTSKGM 462
EM G+
Sbjct: 471 EMIEMGI 477
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 98/187 (52%), Gaps = 6/187 (3%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
P++V N ++ ALC K V +A EVF++M++R P+ TY+ L++ K + K E+
Sbjct: 201 PNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFT-PDSKTYSILLEGWGKEPNLPKAREV 259
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLERMERNGCSLSDDIYNLVLRLY 406
+M C P+ VTYS +++ L +E G++ M+ + C + IY++++ Y
Sbjct: 260 FREM--IDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTY 317
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEP 466
+ + T+ EMER+G D + +I + +MK+ R +EM SKG+
Sbjct: 318 GTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNS 377
Query: 467 RTEKLVI 473
++ +++
Sbjct: 378 KSCNIIL 384
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 180/366 (49%), Gaps = 6/366 (1%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
AL F WA + T+ N +++ LGK+ +F+ + + D+M ++ L++++TF+ +
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKK-LLSKETFALIS 169
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQL 216
RR+A A KV+EAI F+ E+FG ++ F +L L + ++V DA+ +F K ++ +
Sbjct: 170 RRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVF-DKMKKKRF 228
Query: 217 HRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXX 276
DIK++ ++L GW N V +++ PD+ Y I
Sbjct: 229 EPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIR 288
Query: 277 XFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKH 336
F M E NCKP I +I+ L +K++ +ALE F+ K G TYN+L+
Sbjct: 289 FFNEM--EQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGA 346
Query: 337 LCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSD 396
C +RME Y+ V++M R KG PNA TY +L+ L + E + C +
Sbjct: 347 YCWSQRMEDAYKTVDEM-RLKG-VGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTV 404
Query: 397 DIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFRE 456
Y +++R++ + D K WDEM+ G P ++ +I K+ +A YF E
Sbjct: 405 STYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNE 464
Query: 457 MTSKGM 462
M G+
Sbjct: 465 MLDVGI 470
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 16/259 (6%)
Query: 102 NWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAA 161
N K + + P I++ K ++EE + F+EM R + F +L+ +
Sbjct: 255 NREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGS 314
Query: 162 AHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHR--- 218
K+ +A+ F + G L+ + L+ C + +EDA + E +L
Sbjct: 315 EKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDA----YKTVDEMRLKGVGP 370
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXF 278
+ +T+++IL+ + + EA V++ + C P + TY +
Sbjct: 371 NARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIK-- 425
Query: 279 RGMWNE--GCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKH 336
+W+E G P + + + +I ALC + ++ EA E F +M + G P ++ L +
Sbjct: 426 --IWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQT 483
Query: 337 LCKIRRMEKVYELVEDMER 355
L R +KV +LV M+R
Sbjct: 484 LLDEGRKDKVTDLVVKMDR 502
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 7/167 (4%)
Query: 306 KRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAV 365
++V EA+ F M+E G + + +N ++ L K R + ++ + M++K+ P+
Sbjct: 176 RKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFE--PDIK 233
Query: 366 TYSCLLNSLKGPE----EVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDE 421
+Y+ LL G E V V M+ G Y +++ + K + + ++E
Sbjct: 234 SYTILLEGW-GQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNE 292
Query: 422 MERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRT 468
ME+ C P + +I+G K+ DA+ +F S G E T
Sbjct: 293 MEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPT 339
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 181/374 (48%), Gaps = 10/374 (2%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTS-RVCNEILDILGKMSRFEELHQVFDEMSHREGLV 147
RH +L FFNWA+ D Y S NE++D+ GK+ +F+ + D M R +
Sbjct: 125 RHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEI 184
Query: 148 NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF 207
+ +TF+ L+RR+ A EA+ F E +G D AF ++ L R + +A++ F
Sbjct: 185 SIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF 244
Query: 208 HSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXX 267
S F+ D+ + ++ GWC G EA++V+K++ + P+++TY+ I
Sbjct: 245 DSLKDRFE--PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCR 302
Query: 268 XXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
F M + G C P+ + N ++ R + L+V+ MK+ GCEP+
Sbjct: 303 CGQISRAHDVFADMLDSG--CAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDT 360
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPG---VL 384
TYN LI+ C+ +E +++ M +KK C NA T++ + ++ +V G +
Sbjct: 361 ITYNFLIEAHCRDENLENAVKVLNTMIKKK--CEVNASTFNTIFRYIEKKRDVNGAHRMY 418
Query: 385 ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYEN 444
+M C + YN+++R+++ + D + K EM+ P+ +Y +++
Sbjct: 419 SKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGM 478
Query: 445 GKMKDAMRYFREMT 458
G +A + F+EM
Sbjct: 479 GHWNNAYKLFKEMV 492
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 198/425 (46%), Gaps = 17/425 (4%)
Query: 59 RRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASKADSYAPTSRVCN 118
++D + V + L C RR + W A FF WA+ Y + N
Sbjct: 111 KKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYN 170
Query: 119 EILDILGKMSRFEELHQVFDEMSHRE--GLVNEDTFSTLLRRFAAAHKVEEAISMFYTRE 176
++D+LGK F+ + ++ +EM+ E LV DT S ++RR A + K +A+ F E
Sbjct: 171 AMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEME 230
Query: 177 Q-FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ-LHRDIKTWNVILNGWCVLG 234
+ +G+ D A +L+ L + +E A +F + F + D +T+N++++G+C
Sbjct: 231 KSYGVKTDTIAMNSLMDALVKENSIEHAHEVF---LKLFDTIKPDARTFNILIHGFCKAR 287
Query: 235 NAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVI 294
+A+ + + ++ PD+ TY +F+ M GCN P+VV
Sbjct: 288 KFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCN--PNVVT 345
Query: 295 CNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDME 354
++ +L K+V EAL V++ MKE GC P+ Y+SLI L K R + E+ EDM
Sbjct: 346 YTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMT 405
Query: 355 RKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMER---NGCSLSDDIYNLVLRLYMK 408
+ + + Y+ ++++ E +L+RME CS + + Y +L++
Sbjct: 406 NQ--GVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCH 463
Query: 409 WDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRT 468
L M +N D +Y ++I G +GK+++A +F E KGMV T
Sbjct: 464 KKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDST 523
Query: 469 EKLVI 473
K+++
Sbjct: 524 CKMLV 528
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 202/470 (42%), Gaps = 43/470 (9%)
Query: 3 YHLGARRTTRILETLF--PLNPNPVKSIPPPLFTRRFLHSQPEHAAGAGAFVQNLLKFRR 60
Y ++ RI TL P +P+ V I L R EH L+ +
Sbjct: 14 YQTPKSQSFRIFSTLLHDPPSPDLVNEISRVLSDHRNPKDDLEH---------TLVAYSP 64
Query: 61 DKPTDQVERALDLC---GFXXXXXXXXXXXRRHRSDWKPALVFFNWASKADSYAPTSRVC 117
++ VE+ L C GF PA FF WA + +A +
Sbjct: 65 RVSSNLVEQVLKRCKNLGF-------------------PAHRFFLWARRIPDFAHSLESY 105
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGL-VNEDTFSTLLRRFAAAHKVEEAISMFYTRE 176
+ +++ILG +F L E ++ F + R ++ A+ EA F
Sbjct: 106 HILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMV 165
Query: 177 QFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNA 236
+FG+ +D LL LC KHV A+ F KA+ F + KT+++++ GW + +A
Sbjct: 166 EFGIKPCVDDLDQLLHSLCDKKHVNHAQEFF-GKAKGFGIVPSAKTYSILVRGWARIRDA 224
Query: 237 HEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICN 296
A++V+ +++ C DL Y + F+ M N G KPD
Sbjct: 225 SGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL--KPDAYSFA 282
Query: 297 CIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
I A C V A +V MK PNV T+N +IK LCK +++ Y L+++M +K
Sbjct: 283 IFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQK 342
Query: 357 KGSCMPNAVTYSCLLNSLKGPEEV---PGVLERMERNGCSLSDDIYNLVLRLYMKWDNQD 413
+ P+ TY+ ++ EV +L RM+R C YN+VL+L ++ D
Sbjct: 343 GAN--PDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFD 400
Query: 414 GLRKTWDEMERNGCGPDRRSYTIMIHGHY-ENGKMKDAMRYFREMTSKGM 462
+ W+ M P +YT+MIHG + GK+++A RYF M +G+
Sbjct: 401 RATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGI 450
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 68/168 (40%), Gaps = 7/168 (4%)
Query: 310 EALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKG-SCMPNAVTYS 368
EA F M E G +P V + L+ LC + + E + KG +P+A TYS
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEF---FGKAKGFGIVPSAKTYS 212
Query: 369 CLLNSLKGPEEVPG---VLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERN 425
L+ + G V + M C + YN +L K + DG K + EM
Sbjct: 213 ILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNL 272
Query: 426 GCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
G PD S+ I IH + + G + A + M +V T +I
Sbjct: 273 GLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHII 320
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 191/409 (46%), Gaps = 17/409 (4%)
Query: 65 DQVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASKADSYAPTSRVCNEILDIL 124
D +E+ALD +R + + K A FF WA + Y+ NE++DIL
Sbjct: 110 DDMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDIL 169
Query: 125 G----KMSRFEELHQVFDEMS-HREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
K +F + + D M + + +V D +LR++ + + F R++
Sbjct: 170 SSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTH--VQKFAKRKRIR 227
Query: 180 LDL--DLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
+ +++AF LL LC+ V++ E L + ++ D T+NV+ GWC + +
Sbjct: 228 VKTQPEINAFNMLLDALCKCGLVKEGEALL--RRMRHRVKPDANTFNVLFFGWCRVRDPK 285
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCK-PDVVICN 296
+A ++ ++++ + +P+ FTY I F M +G P
Sbjct: 286 KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
Query: 297 CIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
+I AL + E E+ M GC P+V+TY +I+ +C ++++ Y+ +++M K
Sbjct: 346 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK 405
Query: 357 KGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQD 413
P+ VTY+C L L + +E + RM + C+ S YN+++ ++ + D+ D
Sbjct: 406 GYP--PDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPD 463
Query: 414 GLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
G TW EM++ C D +Y MI+G ++ + K+A E+ +KG+
Sbjct: 464 GAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGL 512
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 6/192 (3%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
KPD N + C + +A+++ ++M E G +P TY + I C+ +++ +
Sbjct: 265 KPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAAD 324
Query: 349 LVEDMERKKGSCM--PNAVTYSCLLNSLKG---PEEVPGVLERMERNGCSLSDDIYNLVL 403
L D KGS + P A T++ ++ +L EE ++ RM GC Y V+
Sbjct: 325 LF-DFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVI 383
Query: 404 RLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
+ D K DEM G PD +Y + EN K +A++ + M
Sbjct: 384 EGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCA 443
Query: 464 AEPRTEKLVISM 475
+T ++ISM
Sbjct: 444 PSVQTYNMLISM 455
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 147/302 (48%), Gaps = 9/302 (2%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
TF+ + R+A+A K ++A+ +F + G DL +F T+L LC+ K VE A LF +
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL 187
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
F + D T+NVILNGWC++ +A V K+++ P+L TY T +
Sbjct: 188 RGRFSV--DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ 245
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
F M +C+ DVV ++ + A VF +M G P+VATY
Sbjct: 246 IRHAWEFFLEMKKR--DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATY 303
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVP---GVLERM 387
N++I+ LCK +E + E+M R+ PN TY+ L+ L E +++RM
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEMVRR--GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361
Query: 388 ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKM 447
E GC + YN+++R Y + + +++M C P+ +Y I+I G + +
Sbjct: 362 ENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRS 421
Query: 448 KD 449
+D
Sbjct: 422 ED 423
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 125/272 (45%), Gaps = 9/272 (3%)
Query: 205 TLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXX 264
+L H + R ++ KT+ ++ + G +A +++ ++ C DL ++ T +
Sbjct: 112 SLIH-RMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 170
Query: 265 XXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCE 324
FR + D V N I++ C KR P+ALEV ++M ERG
Sbjct: 171 LCKSKRVEKAYELFRALRGR---FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGIN 227
Query: 325 PNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVP--- 381
PN+ TYN+++K + ++ +E +E KK C + VTY+ +++ E+
Sbjct: 228 PNLTTYNTMLKGFFRAGQIRHAWEFF--LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRAR 285
Query: 382 GVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGH 441
V + M R G S YN ++++ K DN + ++EM R G P+ +Y ++I G
Sbjct: 286 NVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 442 YENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
+ G+ + M ++G +T ++I
Sbjct: 346 FHAGEFSRGEELMQRMENEGCEPNFQTYNMMI 377
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 92/172 (53%), Gaps = 12/172 (6%)
Query: 310 EALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSC 369
+A+++F +M E GC ++A++N+++ LCK +R+EK YEL + +G + VTY+
Sbjct: 144 KAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL---RGRFSVDTVTYNV 200
Query: 370 LLNS---LKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWD---EME 423
+LN +K + VL+ M G + + YN +L+ + + +R W+ EM+
Sbjct: 201 ILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ---IRHAWEFFLEMK 257
Query: 424 RNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISM 475
+ C D +YT ++HG G++K A F EM +G++ T +I +
Sbjct: 258 KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 165/362 (45%), Gaps = 11/362 (3%)
Query: 103 WASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAA 162
++S S+A N L + + EE + + M + + + +TL+R F
Sbjct: 91 YSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRL 150
Query: 163 HKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKT 222
K +A + E G D+ + ++ C+ + +A ++ + D+ T
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD----RMSVSPDVVT 206
Query: 223 WNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMW 282
+N IL C G +A V ++ C PD+ TY I M
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 283 NEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRR 342
+ GC PDVV N +++ +C + R+ EA++ DM GC+PNV T+N +++ +C R
Sbjct: 267 DRGCT--PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 343 MEKVYELVEDMERKKGSCMPNAVTYSCLLNSL--KG-PEEVPGVLERMERNGCSLSDDIY 399
+L+ DM RK S P+ VT++ L+N L KG +LE+M ++GC + Y
Sbjct: 325 WMDAEKLLADMLRKGFS--PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 400 NLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
N +L + K D + + M GC PD +Y M+ ++GK++DA+ +++S
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 460 KG 461
KG
Sbjct: 443 KG 444
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 148/344 (43%), Gaps = 8/344 (2%)
Query: 135 QVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWL 194
++ DEM R + T++ L+ +++EAI G ++ +L +
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 195 CRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
C DAE L R+ + T+N+++N C G A + + + C+P+
Sbjct: 320 CSTGRWMDAEKLLADMLRK-GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 255 LFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEV 314
+Y + M + GC PD+V N ++ ALC +V +A+E+
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC--YPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 315 FQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL 374
+ +GC P + TYN++I L K + K +L+++M K P+ +TYS L+ L
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK--DLKPDTITYSSLVGGL 494
Query: 375 KGPEEVPGVLE---RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDR 431
+V ++ ER G + +N ++ K D M GC P+
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Query: 432 RSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISM 475
SYTI+I G G K+A+ E+ +KG++ + E++ M
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVAGKM 598
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 8/187 (4%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
PD++ C +I C + +A ++ + ++ G P+V TYN +I CK + +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLERMERNGCSLSDDIYNLVLRLY 406
++ M S P+ VTY+ +L SL ++ VL+RM + C Y +++
Sbjct: 195 LDRM-----SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT 249
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEP 466
+ K DEM GC PD +Y ++++G + G++ +A+++ +M S G
Sbjct: 250 CRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 467 RTEKLVI 473
T +++
Sbjct: 310 ITHNIIL 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 310 EALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSC 369
E + ++M G P++ +LI+ C++ + K +++E +E +P+ +TY+
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILE--GSGAVPDVITYNV 177
Query: 370 LLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGP 429
+++ E+ L ++R S YN +LR + D M + C P
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 430 DRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
D +YTI+I + + AM+ EM +G + T ++++
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 172/354 (48%), Gaps = 11/354 (3%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
P + N+++ L K R E ++ + M R ++ T+ L+ +V+ A
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+FY + ++ F TL+ + ++DA+ + + + D+ T+N ++ G+
Sbjct: 344 LFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
G A V D+ C+P++++Y + M +G KP
Sbjct: 400 WKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL--KP 457
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
+ V NC+I A C + R+PEA+E+F++M +GC+P+V T+NSLI LC++ ++ L+
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 351 EDMERKKGSCMPNAVTYSCLLNSL--KGP-EEVPGVLERMERNGCSLSDDIYNLVLRLYM 407
DM + + N VTY+ L+N+ +G +E ++ M G L + YN +++
Sbjct: 518 RDMISE--GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 408 KWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
+ D R +++M R+G P S I+I+G +G +++A+ + +EM +G
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 155/378 (41%), Gaps = 42/378 (11%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
A VF++ S+ PT ++ ++ + + +M+ + N + TL+
Sbjct: 202 ANVFYDMLSR--KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLI 259
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQL 216
+ ++V EA+ + G D + F +++ LC++ + +A + +
Sbjct: 260 HSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFA 319
Query: 217 HRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXX 276
DI T+ ++NG C +G AK D+ +P++ + T I
Sbjct: 320 PDDI-TYGYLMNGLCKIGRVDAAK----DLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKA 374
Query: 277 XFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKH 336
M PDV N +I + V ALEV DM+ +GC+PNV +Y L+
Sbjct: 375 VLSDMVTS-YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Query: 337 LCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSD 396
CK+ ++++ Y ++ +M PN V ++CL+++ +P +E
Sbjct: 434 FCKLGKIDEAYNVLNEMSAD--GLKPNTVGFNCLISAFCKEHRIPEAVE----------- 480
Query: 397 DIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFRE 456
+ EM R GC PD ++ +I G E ++K A+ R+
Sbjct: 481 ---------------------IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519
Query: 457 MTSKGMVAEPRTEKLVIS 474
M S+G+VA T +I+
Sbjct: 520 MISEGVVANTVTYNTLIN 537
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 128/290 (44%), Gaps = 19/290 (6%)
Query: 94 WKPALVFF---------NWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHRE 144
WK LV N K + Y+ T ++D K+ + +E + V +EMS
Sbjct: 400 WKEGLVGLALEVLHDMRNKGCKPNVYSYTI-----LVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 145 GLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAE 204
N F+ L+ F H++ EA+ +F + G D+ F +L+ LC ++ A
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514
Query: 205 TLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXX 264
L E + + T+N ++N + G EA+++ +++ D TY + I
Sbjct: 515 WLLRDMISEGVVANTV-TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKG 573
Query: 265 XXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCE 324
F M +G P + CN +I+ LC V EA+E ++M RG
Sbjct: 574 LCRAGEVDKARSLFEKMLRDGH--APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 325 PNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL 374
P++ T+NSLI LC+ R+E + ++ + P+ VT++ L++ L
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE--GIPPDTVTFNTLMSWL 679
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 157/399 (39%), Gaps = 76/399 (19%)
Query: 100 FFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRF 159
F+W + Y + V ++ LG F+ + ++ +M + E F +++R +
Sbjct: 97 LFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDY 156
Query: 160 AAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRD 219
A + + + ++V E F
Sbjct: 157 DKAGFPGQTTRL----------------------MLEMRNVYSCEPTF------------ 182
Query: 220 IKTWNVILNGWCVLGNAHE-AKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXF 278
K++NV+L V GN H+ A V+ D+++ K P LFT+ +
Sbjct: 183 -KSYNVVLE-ILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLL 240
Query: 279 RGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLC 338
R M GC P+ VI +I +L RV EAL++ ++M GC P+ T+N +I LC
Sbjct: 241 RDMTKHGC--VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 339 KIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL----------------KGPEEVP- 381
K R+ + ++V M + + P+ +TY L+N L PE V
Sbjct: 299 KFDRINEAAKMVNRMLIRGFA--PDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIF 356
Query: 382 -----GVLE--RMERNGCSLSDDI-----------YNLVLRLYMKWDNQDGLRKTWDEME 423
G + R++ LSD + YN ++ Y K + +M
Sbjct: 357 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR 416
Query: 424 RNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
GC P+ SYTI++ G + GK+ +A EM++ G+
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 108 DSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEE 167
D +AP++ CN +++ L + EE + EM R + TF++L+ A ++E+
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Query: 168 AISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVIL 227
++MF + G+ D F TL+ WLC+ V DA L + E + +TW+++L
Sbjct: 653 GLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA-CLLLDEGIEDGFVPNHRTWSILL 711
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 179/418 (42%), Gaps = 19/418 (4%)
Query: 49 GAFVQNLLKFRRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASKAD 108
G F+Q L K ++++L G R + + FF+WA +
Sbjct: 92 GVFLQKL------KGKSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREP 145
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDT--FSTLLRRFAAAHKVE 166
+ IL LG+ F + V M EG VN D + + F H V
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVC-EG-VNPDLECLTIAMDSFVRVHYVR 203
Query: 167 EAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
AI +F E FG+ ++F LL LC HV A+++F++K D ++N++
Sbjct: 204 RAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPF--DSCSYNIM 261
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC 286
++GW LG E ++V K+++ S PD +Y+ I F + ++G
Sbjct: 262 ISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKG- 320
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKV 346
PD + N +I + E++ ++ M + CEPN+ TY+ L+ L K R++
Sbjct: 321 -NVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDA 379
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLNSL--KGPEEVPGVL-ERMERNGCSLSDDIYNLVL 403
E+ E+M + +P + L L GP V+ ++ + GC +S+ Y L+L
Sbjct: 380 LEIFEEMLSR--GVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLL 437
Query: 404 RLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
+ ++ L WDEM+ +G D Y ++ G G +++A+ E KG
Sbjct: 438 KRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKG 495
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 117/279 (41%), Gaps = 13/279 (4%)
Query: 205 TLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXX 264
T F RE + +D+ +++VIL V K ++ PDL +
Sbjct: 136 TFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDS 195
Query: 265 XXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCE 324
F + G C + N ++ LC + V A VF ++G
Sbjct: 196 FVRVHYVRRAIELFEESESFGVKCSTESF--NALLRCLCERSHVSAAKSVFN--AKKGNI 251
Query: 325 P-NVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPG- 382
P + +YN +I K+ +E++ +++++M + P+ ++YS L+ L +
Sbjct: 252 PFDSCSYNIMISGWSKLGEVEEMEKVLKEM--VESGFGPDCLSYSHLIEGLGRTGRINDS 309
Query: 383 --VLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHG 440
+ + ++ G ++YN ++ ++ + D + + M C P+ +Y+ ++ G
Sbjct: 310 VEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSG 369
Query: 441 HYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISMNSPL 479
+ K+ DA+ F EM S+G++ T LV S PL
Sbjct: 370 LIKGRKVSDALEIFEEMLSRGVLP---TTGLVTSFLKPL 405
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 17/264 (6%)
Query: 110 YAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAI 169
+ P + +++ LG+ R + ++FD + H+ + + + ++ ++ F +A +E
Sbjct: 286 FGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDE-- 343
Query: 170 SMFYTREQFGLDLD--LDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVIL 227
SM Y R + + L+ + L+ L + + V DA +F E L R + ++
Sbjct: 344 SMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIF-----EEMLSRGVLPTTGLV 398
Query: 228 NGW----CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWN 283
+ C G H A +++ + CR Y + + M
Sbjct: 399 TSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQE 458
Query: 284 EGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRM 343
G DV + I+D LC + A+ V ++ +G PN Y+ L L +
Sbjct: 459 SGY--PSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKT 516
Query: 344 EKVYELVEDMERKKGSCMPNAVTY 367
E Y+L ++ KK NA ++
Sbjct: 517 ELAYKLF--LKIKKARATENARSF 538
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 165/365 (45%), Gaps = 8/365 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P S + I+ +L ++ + E + F EM + L + ++TL+ F + A
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
FY + D+ + ++ C+ + +A LFH + L D T+ ++NG+C
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYC 432
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
G+ +A RV ++ + C P++ TY T I MW G +P+
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL--QPN 490
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
+ N I++ LC + EA+++ + + G + TY +L+ CK M+K E+++
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 352 DMERKKGSCMPNAVTYSCLLNS--LKGP-EEVPGVLERMERNGCSLSDDIYNLVLRLYMK 408
+M K P VT++ L+N L G E+ +L M G + + +N +++ Y
Sbjct: 551 EMLGK--GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 409 WDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRT 468
+N + +M G GPD ++Y ++ GH + MK+A F+EM KG T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 469 EKLVI 473
++I
Sbjct: 669 YSVLI 673
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 155/354 (43%), Gaps = 8/354 (2%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N ++ + ++ R +E H + M + + ++ST++ + ++++ + ++
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
GL + + +++ LCR + +AE F R+ L D + +++G+C G+
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP-DTVVYTTLIDGFCKRGDIR 368
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
A + + ++ + PD+ TY I F M+ +G +PD V
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG--LEPDSVTFTE 426
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
+I+ C + +A V M + GC PNV TY +LI LCK ++ EL+ +M K
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW--K 484
Query: 358 GSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
PN TY+ ++N L EE ++ E G + Y ++ Y K D
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRT 468
++ EM G P ++ ++++G +G ++D + M +KG+ T
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 138/320 (43%), Gaps = 14/320 (4%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P S E+++ K ++ +V + M N T++TL+ ++ A +
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ---LHRDIKTWNVILN 228
+ + GL ++ + +++ LC+ ++E+A L EF+ L+ D T+ +++
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL----VGEFEAAGLNADTVTYTTLMD 534
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
+C G +A+ + K+++ +P + T+ + M +G
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI-- 592
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
P+ N ++ C + + A +++DM RG P+ TY +L+K CK R M++ +
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
L ++M+ K S + TYS L+ K E V ++M R G + +I++
Sbjct: 653 LFQEMKGKGFSV--SVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDT 710
Query: 406 YMKWDNQDGLRKTWDEMERN 425
K D + DE+ N
Sbjct: 711 KYKGKRPDTIVDPIDEIIEN 730
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 12/203 (5%)
Query: 278 FRGMWNEGCNCKPDVVICNCIIDAL---CFKKRVPEALEVFQDMKERGCEPNVATYNSLI 334
F M N G D CN + L C+K A+ VF++ E G NVA+YN +I
Sbjct: 198 FEKMLNYGLVLSVDS--CNVYLTRLSKDCYK--TATAIIVFREFPEVGVCWNVASYNIVI 253
Query: 335 KHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS---LKGPEEVPGVLERMERNG 391
+C++ R+++ + L+ ME K + P+ ++YS ++N ++V ++E M+R G
Sbjct: 254 HFVCQLGRIKEAHHLLLLMELKGYT--PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 392 CSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAM 451
+ IY ++ L + + + EM R G PD YT +I G + G ++ A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 452 RYFREMTSKGMVAEPRTEKLVIS 474
++F EM S+ + + T +IS
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIIS 394
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 165/365 (45%), Gaps = 8/365 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P S + I+ +L ++ + E + F EM + L + ++TL+ F + A
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
FY + D+ + ++ C+ + +A LFH + L D T+ ++NG+C
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYC 432
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
G+ +A RV ++ + C P++ TY T I MW G +P+
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL--QPN 490
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
+ N I++ LC + EA+++ + + G + TY +L+ CK M+K E+++
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 352 DMERKKGSCMPNAVTYSCLLNS--LKGP-EEVPGVLERMERNGCSLSDDIYNLVLRLYMK 408
+M K P VT++ L+N L G E+ +L M G + + +N +++ Y
Sbjct: 551 EMLGK--GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 409 WDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRT 468
+N + +M G GPD ++Y ++ GH + MK+A F+EM KG T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 469 EKLVI 473
++I
Sbjct: 669 YSVLI 673
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 155/354 (43%), Gaps = 8/354 (2%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N ++ + ++ R +E H + M + + ++ST++ + ++++ + ++
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
GL + + +++ LCR + +AE F R+ L D + +++G+C G+
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP-DTVVYTTLIDGFCKRGDIR 368
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
A + + ++ + PD+ TY I F M+ +G +PD V
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG--LEPDSVTFTE 426
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
+I+ C + +A V M + GC PNV TY +LI LCK ++ EL+ +M K
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW--K 484
Query: 358 GSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
PN TY+ ++N L EE ++ E G + Y ++ Y K D
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRT 468
++ EM G P ++ ++++G +G ++D + M +KG+ T
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 138/320 (43%), Gaps = 14/320 (4%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P S E+++ K ++ +V + M N T++TL+ ++ A +
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ---LHRDIKTWNVILN 228
+ + GL ++ + +++ LC+ ++E+A L EF+ L+ D T+ +++
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL----VGEFEAAGLNADTVTYTTLMD 534
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
+C G +A+ + K+++ +P + T+ + M +G
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI-- 592
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
P+ N ++ C + + A +++DM RG P+ TY +L+K CK R M++ +
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
L ++M+ K S + TYS L+ K E V ++M R G + +I++
Sbjct: 653 LFQEMKGKGFSV--SVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDT 710
Query: 406 YMKWDNQDGLRKTWDEMERN 425
K D + DE+ N
Sbjct: 711 KYKGKRPDTIVDPIDEIIEN 730
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 12/203 (5%)
Query: 278 FRGMWNEGCNCKPDVVICNCIIDAL---CFKKRVPEALEVFQDMKERGCEPNVATYNSLI 334
F M N G D CN + L C+K A+ VF++ E G NVA+YN +I
Sbjct: 198 FEKMLNYGLVLSVDS--CNVYLTRLSKDCYK--TATAIIVFREFPEVGVCWNVASYNIVI 253
Query: 335 KHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS---LKGPEEVPGVLERMERNG 391
+C++ R+++ + L+ ME K + P+ ++YS ++N ++V ++E M+R G
Sbjct: 254 HFVCQLGRIKEAHHLLLLMELKGYT--PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 392 CSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAM 451
+ IY ++ L + + + EM R G PD YT +I G + G ++ A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 452 RYFREMTSKGMVAEPRTEKLVIS 474
++F EM S+ + + T +IS
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIIS 394
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 177/392 (45%), Gaps = 17/392 (4%)
Query: 97 ALVFFNWAS-KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHRE-GLV--NEDTF 152
L FF+W S K S+ S +L+ LG+ + R G V + F
Sbjct: 84 GLRFFDWVSNKGFSHKEQSFFL--MLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYF 141
Query: 153 STLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAR 212
++L+R + A +E++ +F T +Q G+ + F +LL L + A LF R
Sbjct: 142 NSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRR 201
Query: 213 EFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXX 272
+ + D T+N ++NG+C EA R++KD+ C PD+ TY T I
Sbjct: 202 TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVK 261
Query: 273 XXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNS 332
GM + + P+VV ++ C K+ + EA+ VF DM RG +PN TYN+
Sbjct: 262 IAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNT 321
Query: 333 LIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS------LKGPEEVPGVLER 386
LIK L + R +++ +++ + P+A T++ L+ + L +V +
Sbjct: 322 LIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLN 381
Query: 387 MERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEME----RNGCGPDRRSYTIMIHGHY 442
M+ + S S + L + ++D + L E E ++ C P +Y M
Sbjct: 382 MKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLC 441
Query: 443 ENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
NGK K A + FR++ +G V +P + K +I+
Sbjct: 442 ANGKTKQAEKVFRQLMKRG-VQDPPSYKTLIT 472
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 169/359 (47%), Gaps = 8/359 (2%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N++L + KM++FE + + ++M + T+S + F ++ A+++ +
Sbjct: 87 NKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK 146
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G + D+ +LL C K + DA L + E D T+ +++G + A
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALV-DQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
EA + ++ C+PDL TY T + M E K +VVI N
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM--EAARIKANVVIFNT 263
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
IID+LC + V A+++F +M+ +G PNV TYNSLI LC R L+ +M KK
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 358 GSCMPNAVTYSCLLNSL--KGP-EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
+ PN VT++ L+++ +G E + E M + YNL++ + + D
Sbjct: 324 IN--PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
++ + M C P+ ++Y +I+G + +++D + FREM+ +G+V T +I
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 149/354 (42%), Gaps = 37/354 (10%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
Y P + ++ L ++ E + D+M R + T+ T++ ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+++ E + ++ F T++ LC+Y+HVE A LF ++ + ++ T+N ++N
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF-TEMETKGIRPNVVTYNSLIN 301
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
C G +A R+ +++ K P++ T+ I M +
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID- 360
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
PD + N +I+ C R+ EA ++F+ M + C PN+ TYN+LI CK +R+E E
Sbjct: 361 -PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMK 408
L +M ++ + N VTY+ ++ + +
Sbjct: 420 LFREMSQR--GLVGNTVTYTTIIQG--------------------------------FFQ 445
Query: 409 WDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
+ D + + +M N D +Y+I++HG GK+ A+ F+ + M
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 126/268 (47%), Gaps = 12/268 (4%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
S P + N +++ +R +E Q+F M ++ L N T++TL+ F +VE+
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+ +F Q GL + + T++ + + A+ +F ++ DI T++++L+
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN-RVPTDIMTYSILLH 476
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCN- 287
G C G A ++K + S+ ++F Y T I W+ C+
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA-------WDLFCSL 529
Query: 288 -CKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKV 346
KPDVV N +I LC K+ + EA ++F+ MKE G PN TYN+LI+ +
Sbjct: 530 SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAAS 589
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLNSL 374
EL+++M + + +A T S + N L
Sbjct: 590 AELIKEM--RSSGFVGDASTISLVTNML 615
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 169/361 (46%), Gaps = 12/361 (3%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
+++L + KM++F+ + + ++M + N T+S L+ F ++ A+++ +
Sbjct: 85 SKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMK 144
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G + D+ +LL C + DA +L + E D T+N +++G A
Sbjct: 145 LGYEPDIVTLNSLLNGFCHGNRISDAVSLV-GQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
EA + ++ C+PDL TY + + M E +P VVI N
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM--EQGKIEPGVVIYNT 261
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
IIDALC K V +AL +F +M +G PNV TYNSLI+ LC R L+ DM +K
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 358 GSCMPNAVTYSCLLNSLKGPE---EVPGVLERMERNGCSLSDDI--YNLVLRLYMKWDNQ 412
+ PN VT+S L+++ E + + M + S+ DI Y+ ++ + D
Sbjct: 322 IN--PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRL 377
Query: 413 DGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLV 472
D + ++ M C P+ +Y +I G + ++ + M FREM+ +G+V T +
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 473 I 473
I
Sbjct: 438 I 438
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 155/329 (47%), Gaps = 16/329 (4%)
Query: 152 FSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKA 211
++T++ V +A+++F + G+ ++ + +L+ LC Y DA L S
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL-SDM 317
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
E +++ ++ T++ +++ + G EA++++ +++ PD+FTY++ I
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 272 XXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYN 331
F M ++ +C P+VV N +I C KRV E +E+F++M +RG N TY
Sbjct: 378 DEAKHMFELMISK--DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 332 SLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPG---VLERME 388
+LI + R + + + M +P+ +TYS LL+ L +V V E ++
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSD--GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 389 RNGCSLSDDIYNLVLRLYMKWDN-QDGLRKTWD---EMERNGCGPDRRSYTIMIHGHYEN 444
R+ YN+++ K +DG WD + G P+ +YT M+ G
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDG----WDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 445 GKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
G ++A FREM +G + + T +I
Sbjct: 550 GLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 174/438 (39%), Gaps = 74/438 (16%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
Y P S N ++ L + +R E + D M + + T+ ++ ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+S+ EQ ++ + + T++ LC YK+V DA LF ++ + ++ T+N ++
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF-TEMDNKGIRPNVVTYNSLIR 299
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
C G +A R+ D++ K P++ T++ I + M +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID- 358
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
PD+ + +I+ C R+ EA +F+ M + C PNV TYN+LIK CK +R+++ E
Sbjct: 359 -PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 349 LVEDMERK---------------------------------KGSCMPNAVTYSCLLNSLK 375
L +M ++ +P+ +TYS LL+ L
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 376 GPEEVPG---VLERMERNGCSLSDDIYNLVLRLYMK-------WD--------------- 410
+V V E ++R+ YN+++ K WD
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 411 ---------NQDGLRKTWD----EMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
+ GL++ D EM+ G PD +Y +I H +G + REM
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Query: 458 TSKGMVAEPRTEKLVISM 475
S V + T LV +M
Sbjct: 598 RSCRFVGDASTIGLVTNM 615
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 171/361 (47%), Gaps = 12/361 (3%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N++L + KM +F+ + + ++M E + T++ L+ F ++ A+++ +
Sbjct: 89 NKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G + + +LL C K + DA L + E D T+ +++G + A
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALV-DQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
EA + ++ C+P+L TY + M E + DVVI N
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM--EAAKIEADVVIFNT 265
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
IID+LC + V +AL +F++M+ +G PNV TY+SLI LC R +L+ DM KK
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 358 GSCMPNAVTYSCLLNSLKGPE---EVPGVLERMERNGCSLSDDI--YNLVLRLYMKWDNQ 412
+ PN VT++ L+++ E + + M + S+ DI YN ++ + D
Sbjct: 326 IN--PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR--SIDPDIFTYNSLVNGFCMHDRL 381
Query: 413 DGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLV 472
D ++ ++ M C PD +Y +I G ++ +++D FREM+ +G+V + T +
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 473 I 473
I
Sbjct: 442 I 442
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 163/369 (44%), Gaps = 8/369 (2%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
Y P + ++ L ++ E + D M R N T+ ++ + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+++ E ++ D+ F T++ LC+Y+HV+DA LF + + ++ T++ +++
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLIS 303
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
C G +A ++ D++ K P+L T+ I + M +
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID- 362
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
PD+ N +++ C R+ +A ++F+ M + C P+V TYN+LIK CK +R+E E
Sbjct: 363 -PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
L +M + + + VTY+ L+ L + V ++M +G Y+++L
Sbjct: 422 LFREMSHR--GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
+ + +D M+++ D YT MI G + GK+ D F ++ KG+
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Query: 466 PRTEKLVIS 474
T +IS
Sbjct: 540 VVTYNTMIS 548
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 124/262 (47%), Gaps = 5/262 (1%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N ++D K +F E +++D+M R + T+++L+ F ++++A M
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F D+ + TL+ C+ K VED LF + L D T+ ++ G
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGDTVTYTTLIQGLF 446
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
G+ A++V+K +++ PD+ TY+ + F M K D
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS--EIKLD 504
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
+ I +I+ +C +V + ++F + +G +PNV TYN++I LC R +++ Y L++
Sbjct: 505 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 564
Query: 352 DMERKKGSCMPNAVTYSCLLNS 373
M K+ +PN+ TY+ L+ +
Sbjct: 565 KM--KEDGPLPNSGTYNTLIRA 584
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 173/362 (47%), Gaps = 14/362 (3%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N++L + KM++F+ + + + M + + +++ L+ F ++ A+++ +
Sbjct: 84 NKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 143
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK-AREFQLHRDIKTWNVILNGWCVLGNA 236
G + D+ +LL C K + +A L E+Q + T+N +++G + A
Sbjct: 144 LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ--PNTVTFNTLIHGLFLHNKA 201
Query: 237 HEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICN 296
EA + ++A C+PDLFTY T + + M E + DVVI
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM--EKGKIEADVVIYT 259
Query: 297 CIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
IIDALC K V +AL +F +M +G PNV TYNSLI+ LC R L+ DM +
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 357 KGSCMPNAVTYSCLLNSLKGPE---EVPGVLERMERNGCSLSDDI--YNLVLRLYMKWDN 411
K + PN VT+S L+++ E + + M + S+ DI Y+ ++ + D
Sbjct: 320 KIN--PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDR 375
Query: 412 QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKL 471
D + ++ M C P+ +Y +I G + ++++ M FREM+ +G+V T
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 472 VI 473
+I
Sbjct: 436 LI 437
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 167/356 (46%), Gaps = 8/356 (2%)
Query: 110 YAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAI 169
Y P + N ++ L ++ E + D M R + T+ T++ ++ A+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 170 SMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
S+ E+ ++ D+ + T++ LC YK+V DA LF ++ + ++ T+N ++
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF-TEMDNKGIRPNVVTYNSLIRC 299
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCK 289
C G +A R+ D++ K P++ T++ I + M +
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID-- 357
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
PD+ + +I+ C R+ EA +F+ M + C PNV TYN+LIK CK +R+E+ EL
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSLKGPEE---VPGVLERMERNGCSLSDDIYNLVLRLY 406
+M ++ + N VTY+ L+ L + + ++M +G Y+++L
Sbjct: 418 FREMSQR--GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
K+ + ++ ++++ PD +Y IMI G + GK++D F ++ KG+
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 154/329 (46%), Gaps = 16/329 (4%)
Query: 152 FSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKA 211
++T++ V +A+++F + G+ ++ + +L+ LC Y DA L S
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL-SDM 316
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
E +++ ++ T++ +++ + G EA++++ +++ PD+FTY++ I
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 272 XXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYN 331
F M ++ +C P+VV N +I C KRV E +E+F++M +RG N TYN
Sbjct: 377 DEAKHMFELMISK--DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 332 SLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERME 388
+LI+ L + + ++ + M P+ +TYS LL+ L E+ V E ++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSD--GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 389 RNGCSLSDDIYNLVLRLYMKWDN-QDGLRKTWD---EMERNGCGPDRRSYTIMIHGHYEN 444
++ YN+++ K +DG WD + G P+ YT MI G
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDG----WDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 445 GKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
G ++A FREM G + T +I
Sbjct: 549 GLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 121/248 (48%), Gaps = 9/248 (3%)
Query: 129 RFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFR 188
R +E +F+ M ++ N T++TL++ F A +VEE + +F Q GL + +
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
TL+ L + + A+ +F + + DI T++++L+G C G +A V++ +
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 249 SKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRV 308
SK PD++TY I F + +G KP+V+I +I C K
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV--KPNVIIYTTMISGFCRKGLK 551
Query: 309 PEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSC--MPNAVT 366
EA +F++MKE G PN TYN+LI+ + EL+++M SC + +A T
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR----SCGFVGDAST 607
Query: 367 YSCLLNSL 374
S ++N L
Sbjct: 608 ISMVINML 615
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 157/321 (48%), Gaps = 8/321 (2%)
Query: 145 GLV-NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDA 203
GLV +E TF+T+++ + ++ A+ + +FG + ++ C+ VEDA
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA 278
Query: 204 ETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIX 263
+ + D T+N ++NG C G+ A + ++ PD++TY + I
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 264 XXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGC 323
M +C P+ V N +I LC + +V EA E+ + + +G
Sbjct: 339 GLCKLGEVKEAVEVLDQMITR--DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 324 EPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL--KGP-EEV 380
P+V T+NSLI+ LC R EL E+M R KG C P+ TY+ L++SL KG +E
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEM-RSKG-CEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 381 PGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHG 440
+L++ME +GC+ S YN ++ + K + + +DEME +G + +Y +I G
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Query: 441 HYENGKMKDAMRYFREMTSKG 461
++ +++DA + +M +G
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEG 535
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 168/363 (46%), Gaps = 10/363 (2%)
Query: 108 DSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEE 167
+ Y P N ++ L K+ +E +V D+M R+ N T++TL+ ++VEE
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 168 AISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVIL 227
A + G+ D+ F +L+ LC ++ A LF + R D T+N+++
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE-EMRSKGCEPDEFTYNMLI 442
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCN 287
+ C G EA + K + S C + TY T I F M G +
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 288 CKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVY 347
+ V N +ID LC +RV +A ++ M G +P+ TYNSL+ H C+ ++K
Sbjct: 503 --RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 348 ELVEDMERKKGSCMPNAVTYSCLLNSL--KGPEEVPGVLER-MERNGCSLSDDIYNLVLR 404
++V+ M C P+ VTY L++ L G EV L R ++ G +L+ YN V++
Sbjct: 561 DIVQAM--TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ 618
Query: 405 -LYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGK-MKDAMRYFREMTSKGM 462
L+ K + + + +E+N PD SY I+ G G +++A+ + E+ KG
Sbjct: 619 GLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678
Query: 463 VAE 465
V E
Sbjct: 679 VPE 681
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 168/361 (46%), Gaps = 11/361 (3%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLV-NEDTFSTLLRRFAAAHKVEEAISMFYTRE 176
N I+ K R E+ EMS+++G ++ TF+TL+ A V+ AI +
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 177 QFGLDLDLDAFRTLLMWLCRYKHVEDA-ETLFHSKAREFQLHRDIKTWNVILNGWCVLGN 235
Q G D D+ + +++ LC+ V++A E L R+ + T+N +++ C
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD--CSPNTVTYNTLISTLCKENQ 380
Query: 236 AHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVIC 295
EA + + + + PD+ T+ + I F M ++GC +PD
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC--EPDEFTY 438
Query: 296 NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
N +ID+LC K ++ EAL + + M+ GC +V TYN+LI CK + + E+ ++ME
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Query: 356 KKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQ 412
S N+VTY+ L++ L + E+ ++++M G YN +L + + +
Sbjct: 499 HGVS--RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 413 DGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLV 472
M NGC PD +Y +I G + G+++ A + R + KG+ P V
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPV 616
Query: 473 I 473
I
Sbjct: 617 I 617
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 148/328 (45%), Gaps = 9/328 (2%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFY-TREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS 209
+ + ++ F +VE+A++ Q G D F TL+ LC+ HV+ A +
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 210 KAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXX 269
+E D+ T+N +++G C LG EA V ++ C P+ TY T I
Sbjct: 321 MLQE-GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 270 XXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVAT 329
R + ++G PDV N +I LC + A+E+F++M+ +GCEP+ T
Sbjct: 380 QVEEATELARVLTSKGI--LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 330 YNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLER 386
YN LI LC ++++ +++ ME C + +TY+ L++ E + +
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELS--GCARSVITYNTLIDGFCKANKTREAEEIFDE 495
Query: 387 MERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGK 446
ME +G S + YN ++ K + + D+M G PD+ +Y ++ G
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGD 555
Query: 447 MKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+K A + MTS G + T +IS
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 175/411 (42%), Gaps = 41/411 (9%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R + D AL FN ASK +++P + EIL LG+ F+++ ++ ++M +
Sbjct: 58 RSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMG 117
Query: 149 EDTFSTLLRRFAAAHKVEEAISMF-YTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF 207
TF L+ +A +E +S+ + ++FGL D + +L L ++ E +
Sbjct: 118 TSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVE-IS 176
Query: 208 HSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXX 267
H+K + + D+ T+NV++ C A + +D+ + PD T+ T +
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236
Query: 268 XXXXXXXXXXFRGMWNEGCN-------------CK---------------------PDVV 293
M GC+ CK PD
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296
Query: 294 ICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDM 353
N +++ LC V A+E+ M + G +P+V TYNS+I LCK+ +++ E+++ M
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 354 ERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWD 410
+ C PN VTY+ L+++L EE + + G +N +++
Sbjct: 357 ITR--DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 411 NQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
N + ++EM GC PD +Y ++I GK+ +A+ ++M G
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 173/362 (47%), Gaps = 14/362 (3%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLV-NEDTFSTLLRRFAAAHKVEEAISMFYTRE 176
N++L + KM +F+ + + ++M R G+ N T++ L+ F ++ A+++
Sbjct: 14 NKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 177 QFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNA 236
+ G + + +LL C K + DA L + E D T+ +++G + A
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALV-DQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 237 HEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICN 296
EA + ++ C+P+L TY + M E + DVVI N
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM--EAAKIEADVVIFN 189
Query: 297 CIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
IID+LC + V +AL +F++M+ +G PNV TY+SLI LC R +L+ DM K
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 357 KGSCMPNAVTYSCLLNSLKGPE---EVPGVLERMERNGCSLSDDI--YNLVLRLYMKWDN 411
K + PN VT++ L+++ E + + M + S+ DI YN ++ + D
Sbjct: 250 KIN--PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR--SIDPDIFTYNSLINGFCMHDR 305
Query: 412 QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKL 471
D ++ ++ M C PD +Y +I G ++ +++D FREM+ +G+V + T
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 472 VI 473
+I
Sbjct: 366 LI 367
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 162/369 (43%), Gaps = 8/369 (2%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
Y P + ++ L ++ E + D M R N T+ ++ ++ A
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
++ E ++ D+ F T++ LC+Y+HV+DA LF + + ++ T++ +++
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLIS 228
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
C G +A ++ D++ K P+L T+ I M +
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID- 287
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
PD+ N +I+ C R+ +A ++F+ M + C P++ TYN+LIK CK +R+E E
Sbjct: 288 -PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
L +M + + + VTY+ L+ L + V ++M +G Y+++L
Sbjct: 347 LFREMSHR--GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
+ + +D M+++ D YT MI G + GK+ D F ++ KG+
Sbjct: 405 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Query: 466 PRTEKLVIS 474
T +IS
Sbjct: 465 VVTYNTMIS 473
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 129/265 (48%), Gaps = 11/265 (4%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N ++D K +F E ++ D+M R + T+++L+ F ++++A M
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 172 F---YTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
F +++ F DLD + TL+ C+ K VED LF + L D T+ ++
Sbjct: 313 FEFMVSKDCFP---DLDTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGDTVTYTTLIQ 368
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
G G+ A++V+K +++ PD+ TY+ + F M +
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM--QKSEI 426
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
K D+ I +I+ +C +V + ++F + +G +PNV TYN++I LC R +++ Y
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNS 373
L++ M K+ +P++ TY+ L+ +
Sbjct: 487 LLKKM--KEDGPLPDSGTYNTLIRA 509
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 166/356 (46%), Gaps = 9/356 (2%)
Query: 108 DSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEE 167
+ + P S N +L + S F + F+E + + +++ +F L++ A ++E+
Sbjct: 123 NGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEK 181
Query: 168 AISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVIL 227
+ + +FG ++ + TL+ C+ +E A+ LF + L + +T+ V++
Sbjct: 182 SFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGK-LGLVANERTYTVLI 240
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCN 287
NG G + +++ + P+L+TY + F M G +
Sbjct: 241 NGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVS 300
Query: 288 CKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVY 347
C ++V N +I LC + ++ EA +V MK G PN+ TYN+LI C + ++ K
Sbjct: 301 C--NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 348 ELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPG---VLERMERNGCSLSDDIYNLVLR 404
L D++ + S P+ VTY+ L++ + G +++ ME G S Y +++
Sbjct: 359 SLCRDLKSRGLS--PSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 405 LYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
+ + DN + + ME G PD +Y+++IHG G+M +A R F+ M K
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 159/365 (43%), Gaps = 10/365 (2%)
Query: 110 YAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAI 169
++P + ++D K E+ +F EM + NE T++ L+ ++
Sbjct: 194 FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGF 253
Query: 170 SMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
M+ ++ G+ +L + ++ LC+ +DA +F + RE + +I T+N ++ G
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF-DEMRERGVSCNIVTYNTLIGG 312
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCK 289
C +EA +V + + P+L TY T I R + + G +
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS-- 370
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
P +V N ++ C K A ++ ++M+ERG +P+ TY LI + MEK +L
Sbjct: 371 PSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Query: 350 VEDMERKKGSCMPNAVTYSCLLNS--LKGP-EEVPGVLERMERNGCSLSDDIYNLVLRLY 406
ME +P+ TYS L++ +KG E + + M C ++ IYN ++ Y
Sbjct: 431 RLSMEEL--GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGY 488
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEP 466
K + K EME P+ SY MI + K K+A R +M G+ +P
Sbjct: 489 CKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI--DP 546
Query: 467 RTEKL 471
T L
Sbjct: 547 STSIL 551
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 10/303 (3%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
+ D P N +++ L K R ++ QVFDEM R N T++TL+ K+
Sbjct: 260 QEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKL 319
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWN 224
EA + + G++ +L + TL+ C + A +L K+R L + T+N
Sbjct: 320 NEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR--GLSPSLVTYN 377
Query: 225 VILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNE 284
++++G+C G+ A ++ K++ +P TY I M E
Sbjct: 378 ILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSM--E 435
Query: 285 GCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRME 344
PDV + +I C K ++ EA +F+ M E+ CEPN YN++I CK
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495
Query: 345 KVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNL 401
+ +L+++ME K+ PN +Y ++ L + +E ++E+M +G S I +L
Sbjct: 496 RALKLLKEMEEKE--LAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSL 553
Query: 402 VLR 404
+ R
Sbjct: 554 ISR 556
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
P+VVI +ID C K + +A ++F +M + G N TY LI L K ++ +E+
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLY 406
E M+ PN TY+C++N L ++ V + M G S + YN ++
Sbjct: 256 YEKMQED--GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEP 466
+ + K D+M+ +G P+ +Y +I G GK+ A+ R++ S+G+
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 467 RTEKLVIS 474
T +++S
Sbjct: 374 VTYNILVS 381
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 181/386 (46%), Gaps = 17/386 (4%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED 150
R +W+ A + F W K + C+ ++ +LG +F + +M + V++D
Sbjct: 134 RDEWRLAFLAFKWGEKRG--CDDQKSCDLMIWVLGNHQKFNIAWCLIRDMFN----VSKD 187
Query: 151 TFSTL---LRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF 207
T + + R+AAA+ +AI F ++F +AF+ LL LCR+ H+E AE
Sbjct: 188 TRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM 247
Query: 208 HSKAREFQLHRDIKTWNVILNGWC-VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXX 266
+ + F + D++ +NVILNGWC + + EAKR+W+++ P+ +Y+ I
Sbjct: 248 LASKKLFPV--DVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFS 305
Query: 267 XXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPN 326
+ M G P + + N ++ L + EA+++ + + E G +P+
Sbjct: 306 KVGNLFDSLRLYDEMKKRGL--APGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPD 363
Query: 327 VATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLER 386
TYNS+I+ LC+ +++ ++ M + S P T+ L ++ E+ VL +
Sbjct: 364 SVTYNSMIRPLCEAGKLDVARNVLATMISENLS--PTVDTFHAFLEAV-NFEKTLEVLGQ 420
Query: 387 MERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGK 446
M+ + +++ + L+L K + K W EM+R + Y I G G
Sbjct: 421 MKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGW 480
Query: 447 MKDAMRYFREMTSKGMVAEPRTEKLV 472
++ A + EM SKG V P +KL+
Sbjct: 481 LEKAREIYSEMKSKGFVGNPMLQKLL 506
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 169/384 (44%), Gaps = 27/384 (7%)
Query: 100 FFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRF 159
F A K S+ + +++ F+ + ++ + ++ E +F + R +
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAY 122
Query: 160 AAAHKVEEAISMFY-TREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREF---- 214
AH ++A+ +F+ ++F + +F ++L +V E L+H + EF
Sbjct: 123 GKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVL-------NVIINEGLYH-RGLEFYDYV 174
Query: 215 ---QLHRDIK----TWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXX 267
++ +I ++N+++ C L A V++ + KC PD +TY T +
Sbjct: 175 VNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCK 234
Query: 268 XXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
M +EGC+ P VI N +ID LC K + ++ +M +GC PN
Sbjct: 235 EERIDEAVLLLDEMQSEGCS--PSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE 292
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVL 384
TYN+LI LC +++K L+E M K C+PN VTY L+N L + + +L
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSK--CIPNDVTYGTLINGLVKQRRATDAVRLL 350
Query: 385 ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYEN 444
ME G L+ IY++++ K + W +M GC P+ Y++++ G
Sbjct: 351 SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCRE 410
Query: 445 GKMKDAMRYFREMTSKGMVAEPRT 468
GK +A M + G + T
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYT 434
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 167/416 (40%), Gaps = 74/416 (17%)
Query: 97 ALVFFNWASKAD---SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
L F+++ ++ + +P N ++ L K+ + +VF M R+ L + T+
Sbjct: 167 GLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYC 226
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
TL+ +++EA+ + + G + L+ LC+ + L + +
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXX 273
+ ++ T+N +++G C+ G +A + + +++SKC P+ TY T I
Sbjct: 287 GCVPNEV-TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATD 345
Query: 274 X-------------------XXXFRGMWNEGC--------------NCKPDVVICNCIID 300
G++ EG CKP++V+ + ++D
Sbjct: 346 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVD 405
Query: 301 ALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSC 360
LC + + EA E+ M GC PN TY+SL+K K E+ ++ ++M+ K C
Sbjct: 406 GLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD--KTGC 463
Query: 361 MPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWD 420
N YS L++ L G V V E M W
Sbjct: 464 SRNKFCYSVLIDGLCG---VGRVKEAM-----------------------------MVWS 491
Query: 421 EMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISMN 476
+M G PD +Y+ +I G G M A++ + EM + EP+++ V++ N
Sbjct: 492 KMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ---EEPKSQPDVVTYN 544
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 135/336 (40%), Gaps = 54/336 (16%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P +++ L K R + ++ M R +N+ +S L+ K EEA+S+
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETL---------------FHSKAREF-- 214
+ + G ++ + L+ LCR +A+ + + S + F
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 215 -----------------QLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFT 257
R+ ++V+++G C +G EA VW ++ +PD
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504
Query: 258 YATFIXXXXXXXXXXXXXXXFRGMW-NEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQ 316
Y++ I + M E +PDVV N ++D LC +K + A+++
Sbjct: 505 YSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLN 564
Query: 317 DMKERGCEPNVATYNSLIKHLC-KIRRMEKVYELVEDM-------ERKKGSCM------- 361
M +RGC+P+V T N+ + L K +K +E++ +R G+C
Sbjct: 565 SMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLG 624
Query: 362 ----PNAVTYSCLLNSLKGPEEVPGVLERMERNGCS 393
P T++ ++ + P+++ +++ RN C+
Sbjct: 625 KYLAPKTSTWAMIVREICKPKKINAAIDKCWRNLCT 660
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 100/239 (41%), Gaps = 18/239 (7%)
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVE 166
A P + + ++ K EE QV+ EM N+ +S L+ +V+
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 167 EAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK--AREFQLHRDIKTWN 224
EA+ ++ G+ D A+ +++ LC ++ A L+H E + D+ T+N
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 225 VILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNE 284
++L+G C+ + A + ++ C PD+ T TF+ + +
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNT----------------LSEK 588
Query: 285 GCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRM 343
+C ++ L ++RV A + + M + P +T+ +++ +CK +++
Sbjct: 589 SNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKI 647
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 168/361 (46%), Gaps = 12/361 (3%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N++L + KM++FE + + ++M + T+S + F ++ A+++ +
Sbjct: 87 NKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK 146
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G + D+ +LL C K + DA L + E D T+ +++G + A
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALV-DQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
EA + ++ C+PDL TY T + + M E + DVVI N
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM--EKGKIEADVVIYNT 263
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
IID LC K + +AL +F +M +G P+V TY+SLI LC R L+ DM +K
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 358 GSCMPNAVTYSCLLNSLKGPE---EVPGVLERMERNGCSLSDDI--YNLVLRLYMKWDNQ 412
+ PN VT+S L+++ E + + M + S+ DI Y+ ++ + D
Sbjct: 324 IN--PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRL 379
Query: 413 DGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLV 472
D + ++ M C P+ +Y+ +I G + ++++ M FREM+ +G+V T +
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 473 I 473
I
Sbjct: 440 I 440
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 169/357 (47%), Gaps = 8/357 (2%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
Y P + ++ L ++ E + D+M R + T+ T++ ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+S+ E+ ++ D+ + T++ LC+YKH++DA LF ++ + D+ T++ +++
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF-TEMDNKGIRPDVFTYSSLIS 301
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
C G +A R+ D++ K P++ T++ I + M +
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID- 360
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
PD+ + +I+ C R+ EA +F+ M + C PNV TY++LIK CK +R+E+ E
Sbjct: 361 -PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
L +M ++ + N VTY+ L++ + + V ++M G + YN++L
Sbjct: 420 LFREMSQR--GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
K ++ ++R+ PD +Y IMI G + GK++D F ++ KG+
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 166/368 (45%), Gaps = 8/368 (2%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
Y P + +L+ R + + D+M + TF+TL+ +K EA
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+++ Q G DL + T++ LC+ ++ A +L K + ++ D+ +N I++
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK-KMEKGKIEADVVIYNTIID 266
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
G C + +A ++ ++ RPD+FTY++ I M N
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN- 325
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
P+VV + +IDA + ++ EA +++ +M +R +P++ TY+SLI C R+++
Sbjct: 326 -PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
+ E M K C PN VTYS L+ K EE + M + G + Y ++
Sbjct: 385 MFELMISK--DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
+ + + D + + +M G P+ +Y I++ G +NGK+ AM F + M +
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 466 PRTEKLVI 473
T ++I
Sbjct: 503 IYTYNIMI 510
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 158/332 (47%), Gaps = 19/332 (5%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
+ ++ L R+ + ++ +M R+ N TFS L+ F K+ EA ++ +
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRD----IKTWNVILNGWCVL 233
+D D+ + +L+ C + +++A+ +F E + +D + T++ ++ G+C
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMF-----ELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 234 GNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVV 293
E +++++ + TY T I F+ M + G + P+++
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH--PNIL 469
Query: 294 ICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDM 353
N ++D LC ++ +A+ VF+ ++ EP++ TYN +I+ +CK ++E +EL ++
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 354 ERKKGSCMPNAVTYSCLLNSL--KGP-EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWD 410
K S PN + Y+ +++ KG EE +L++M+ +G + YN ++R ++
Sbjct: 530 SLKGVS--PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587
Query: 411 NQDGLRKTWDEMERNGCGPDRRS---YTIMIH 439
+++ + EM G D + T M+H
Sbjct: 588 DREASAELIKEMRSCGFAGDASTIGLVTNMLH 619
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 109/277 (39%), Gaps = 41/277 (14%)
Query: 200 VEDAETLFHS--KAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFT 257
V+DA LF K+R F I +N +L+ + + + + DL+T
Sbjct: 64 VDDAVDLFGDMVKSRPFP---SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 258 YATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQD 317
Y+ FI M G +PD+V + +++ C KR+ +A+ +
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGY--EPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 318 MKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP 377
M E G +P+ T+ +LI L + + LV+ M ++ C P+ VTY ++N L
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR--GCQPDLVTYGTVVNGL--- 233
Query: 378 EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIM 437
C D +L L L K ME+ D Y +
Sbjct: 234 --------------CKRGD--IDLALSLLKK-------------MEKGKIEADVVIYNTI 264
Query: 438 IHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
I G + M DA+ F EM +KG+ + T +IS
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 176/380 (46%), Gaps = 9/380 (2%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
A+ F K+ + P+ +++L + KM++F+ + + ++M + N T+S L+
Sbjct: 65 AVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQL 216
F ++ A+++ + G + ++ +LL C K + +A L +
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV-DQMFVTGY 182
Query: 217 HRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXX 276
+ T+N +++G + A EA + ++A C+PDL TY +
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 277 XFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKH 336
M E +P V+I N IID LC K + +AL +F++M+ +G PNV TY+SLI
Sbjct: 243 LLNKM--EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 337 LCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE---EVPGVLERMERNGCS 393
LC R L+ DM +K + P+ T+S L+++ E + + M +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKIN--PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 394 LSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRY 453
S Y+ ++ + D D ++ ++ M C PD +Y +I G + ++++ M
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 454 FREMTSKGMVAEPRTEKLVI 473
FREM+ +G+V T ++I
Sbjct: 419 FREMSQRGLVGNTVTYNILI 438
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 150/317 (47%), Gaps = 16/317 (5%)
Query: 152 FSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKA 211
++T++ +++A+++F E G+ ++ + +L+ LC Y DA L S
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL-SDM 317
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
E +++ D+ T++ +++ + G EA++++ +++ P + TY++ I
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 272 XXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYN 331
F M ++ +C PDVV N +I C KRV E +EVF++M +RG N TYN
Sbjct: 378 DEAKQMFEFMVSK--HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 332 SLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERME 388
LI+ L + + E+ ++M PN +TY+ LL+ L E+ V E ++
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSD--GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 389 RNGCSLSDDIYNLVLRLYMKWDN-QDGLRKTWD---EMERNGCGPDRRSYTIMIHGHYEN 444
R+ + YN+++ K +DG WD + G PD +Y MI G
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDG----WDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
Query: 445 GKMKDAMRYFREMTSKG 461
G ++A F+EM G
Sbjct: 550 GSKEEADALFKEMKEDG 566
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 164/380 (43%), Gaps = 10/380 (2%)
Query: 101 FNWASKADS--YAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRR 158
FN +K + P + N I+D L K ++ +F EM + N T+S+L+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 159 FAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHR 218
+ +A + + ++ D+ F L+ + + +AE L+ + +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR-SIDP 359
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXF 278
I T++ ++NG+C+ EAK++++ +++ C PD+ TY T I F
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 279 RGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLC 338
R M G + V N +I L A E+F++M G PN+ TYN+L+ LC
Sbjct: 420 REMSQRGL--VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 339 KIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPG---VLERMERNGCSLS 395
K ++EK + E ++R K P TY+ ++ + +V + + G
Sbjct: 478 KNGKLEKAMVVFEYLQRSKME--PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 396 DDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFR 455
YN ++ + + +++ + EM+ +G P+ Y +I +G + + +
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 456 EMTSKGMVAEPRTEKLVISM 475
EM S G + T LV +M
Sbjct: 596 EMRSCGFAGDASTIGLVTNM 615
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 5/180 (2%)
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
+I+ C + ++P AL V M + G EPN+ T +SL+ C +R+ + LV+ M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT- 180
Query: 358 GSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
PN VT++ L++ L E +++RM GC Y +V+ K + D
Sbjct: 181 -GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
++ME+ P Y +I G + M DA+ F+EM +KG+ T +IS
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 148/359 (41%), Gaps = 36/359 (10%)
Query: 116 VCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTR 175
V N +L+ L K+ R E+ ++FDE + + TF+ L+R K E+A+ +
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 176 EQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGN 235
FG + D+ + TL+ C+ + A +F D+ T+ +++G+C G
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 236 AHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVIC 295
EA + D++ P T+ + M + G C PDVV
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG--CFPDVVTF 350
Query: 296 NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
+ID C +V + ++++M RG PN TY+ LI LC R+ K E
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARE------- 403
Query: 356 KKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGL 415
LL L + +P +YN V+ + K +
Sbjct: 404 --------------LLGQLASKDIIPQPF-------------MYNPVIDGFCKAGKVNEA 436
Query: 416 RKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+EME+ C PD+ ++TI+I GH G+M +A+ F +M + G + T ++S
Sbjct: 437 NVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 148/359 (41%), Gaps = 36/359 (10%)
Query: 116 VCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTR 175
V N +L+ L K+ R E+ ++FDE + + TF+ L+R K E+A+ +
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 176 EQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGN 235
FG + D+ + TL+ C+ + A +F D+ T+ +++G+C G
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 236 AHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVIC 295
EA + D++ P T+ + M + G C PDVV
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG--CFPDVVTF 350
Query: 296 NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
+ID C +V + ++++M RG PN TY+ LI LC R+ K E
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARE------- 403
Query: 356 KKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGL 415
LL L + +P +YN V+ + K +
Sbjct: 404 --------------LLGQLASKDIIPQPF-------------MYNPVIDGFCKAGKVNEA 436
Query: 416 RKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+EME+ C PD+ ++TI+I GH G+M +A+ F +M + G + T ++S
Sbjct: 437 NVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 157/328 (47%), Gaps = 9/328 (2%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
T+ +L+ + A+++F G+ ++ + TL+ L + +A L ++
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL-ANE 416
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
E L +++T+N+++NG C +G +A + K +++ PD+FT+ I
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
M + G + PDV N +++ LC + + +E ++ M E+GC PN+ T+
Sbjct: 477 MENALEILDVMLDNGVD--PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTF 534
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPG---VLERM 387
N L++ LC+ R++++ L+E+M+ K S P+AVT+ L++ ++ G + +M
Sbjct: 535 NILLESLCRYRKLDEALGLLEEMKNK--SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Query: 388 ERN-GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGK 446
E S S YN+++ + + N K + EM GPD +Y +M+ G + G
Sbjct: 593 EEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN 652
Query: 447 MKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+ ++ EM G + T VI+
Sbjct: 653 VNLGYKFLLEMMENGFIPSLTTLGRVIN 680
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 154/348 (44%), Gaps = 8/348 (2%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N++L +L K +E ++ D++ R L N T++ ++ +++ A+ M +
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G D+ + L+ LC+ ++AE E L D T+N ++ G+C G
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE-GLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
A+R+ D + + PD FTY + I F +G KP+V++ N
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG--IKPNVILYNT 396
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
+I L + + EA ++ +M E+G P V T+N L+ LCK+ + LV+ M K
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK- 455
Query: 358 GSCMPNAVTYSCLLNSLKGP---EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
P+ T++ L++ E +L+ M NG YN +L K +
Sbjct: 456 -GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
+ +T+ M GC P+ ++ I++ K+ +A+ EM +K +
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 154/421 (36%), Gaps = 74/421 (17%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
PT N I+ +L F++ H+V+ M R + +F+ ++ F + A+ +
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 172 F---------------------YTREQF--------------GLDLDLDAFRTLLMWLCR 196
+ E F G+ L L F LL LC+
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 197 YKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLF 256
V++ E L + L ++ T+N+ + G C G A R+ ++ +PD+
Sbjct: 229 KGDVKECEKLLDKVIKRGVLP-NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 257 TYATFIXXXXXXXXXXXXXXXFRGMWNEGCN-------------CK-------------- 289
TY I M NEG CK
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 290 ------PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRM 343
PD +ID LC + AL +F + +G +PNV YN+LIK L +
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 344 EKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYN 400
+ +L +M K +P T++ L+N L + G+++ M G +N
Sbjct: 408 LEAAQLANEMSEK--GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465
Query: 401 LVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
+++ Y + + D M NG PD +Y +++G + K +D M ++ M K
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 461 G 461
G
Sbjct: 526 G 526
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 158/382 (41%), Gaps = 21/382 (5%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN-- 148
+ D AL FN K + T +++ LG +FE + +V +M RE + N
Sbjct: 17 QKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM--RENVGNHM 74
Query: 149 -EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF 207
E + ++ + KV+EA+++F + + + + ++ ++ L + + A ++
Sbjct: 75 LEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVY 134
Query: 208 HSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXX 267
+ R+ + D+ ++ + + +C H A R+ ++ + C ++ Y T +
Sbjct: 135 M-RMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE 193
Query: 268 XXXXXXXXXXFRGMWNEGCNCKPDVVIC----NCIIDALCFKKRVPEALEVFQDMKERGC 323
F M G V +C N ++ LC K V E ++ + +RG
Sbjct: 194 ENFKAEGYELFGKMLASG------VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGV 247
Query: 324 EPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEV 380
PN+ TYN I+ LC+ ++ +V + + P+ +TY+ L+ L +E
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPK--PDVITYNNLIYGLCKNSKFQEA 305
Query: 381 PGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHG 440
L +M G YN ++ Y K + + NG PD+ +Y +I G
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 441 HYENGKMKDAMRYFREMTSKGM 462
G+ A+ F E KG+
Sbjct: 366 LCHEGETNRALALFNEALGKGI 387
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 114/266 (42%), Gaps = 13/266 (4%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N +L+ L K S+FE++ + + M + N TF+ LL K++EA+ +
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ ++ D F TL+ C+ ++ A TLF +++ T+N+I++ +
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFT 613
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
N A++++++++ PD +TY + M G P
Sbjct: 614 EKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG--FIPS 671
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE--L 349
+ +I+ LC + RV EA + M ++G P + +C + + E +
Sbjct: 672 LTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTICDVDKKEVAAPKLV 725
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSLK 375
+ED+ +K SC+ Y L + L+
Sbjct: 726 LEDLLKK--SCI-TYYAYELLFDGLR 748
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 129/313 (41%), Gaps = 10/313 (3%)
Query: 167 EAISMFYT-REQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
+A+ MF + R++ G L +R+++ L Y E E + H +
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
+ + G EA V++ + C P +F+Y + + M + G
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
PDV + + C R AL + +M +GCE NV Y +++ + +
Sbjct: 142 IT--PDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAE 199
Query: 346 VYELVEDMERKKGS-CMPNAVTYSCLLNSL--KGP-EEVPGVLERMERNGCSLSDDIYNL 401
YEL M S C+ T++ LL L KG +E +L+++ + G + YNL
Sbjct: 200 GYELFGKMLASGVSLCLS---TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 402 VLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
++ + DG + + G PD +Y +I+G +N K ++A Y +M ++G
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316
Query: 462 MVAEPRTEKLVIS 474
+ + T +I+
Sbjct: 317 LEPDSYTYNTLIA 329
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 170/370 (45%), Gaps = 14/370 (3%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHRE-GLVNEDTFSTL 155
L F+ +AS + +S + +L ILG+ +F+++ ++ E ++ L++ T +
Sbjct: 91 TLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVV 150
Query: 156 LRRFAAAHKVEEAISMFYTREQFGLDL-DLDAFRTLLMWLCRYKHVEDAETLFHSKAREF 214
L R A V + + F+ ++ D D F LL LC+ K + DA ++HS +F
Sbjct: 151 LGRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQF 210
Query: 215 QLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXX 274
Q D++T+N++L+GW A K +PD+ TY + I
Sbjct: 211 Q--PDLQTFNILLSGWKSSEEAEAFFEEMK---GKGLKPDVVTYNSLIDVYCKDREIEKA 265
Query: 275 XXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLI 334
M E PDV+ +I L + +A EV ++MKE GC P+VA YN+ I
Sbjct: 266 YKLIDKMREE--EETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAI 323
Query: 335 KHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERNG 391
++ C RR+ +LV++M +K S PNA TY+ L ++ E RM N
Sbjct: 324 RNFCIARRLGDADKLVDEMVKKGLS--PNATTYNLFFRVLSLANDLGRSWELYVRMLGNE 381
Query: 392 CSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAM 451
C + +++++ + + D + W++M G G +++ + K+++A
Sbjct: 382 CLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAE 441
Query: 452 RYFREMTSKG 461
+ EM KG
Sbjct: 442 KCLLEMVEKG 451
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 159/406 (39%), Gaps = 66/406 (16%)
Query: 90 HRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGL-VN 148
H S+++ ++ F + + +D+ P ++ + + +M L E G+ ++
Sbjct: 12 HVSNFRLSVSFLHSVALSDAKVPVEEEGDDA-ETVFRMINGSNLQVELKESLSSSGIHLS 70
Query: 149 EDTFSTLLRRFAAAH----------KVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYK 198
+D +L+R +H + AI FY F LD T+L L R +
Sbjct: 71 KDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFY-HSSFSLD-------TMLYILGRNR 122
Query: 199 HVEDA-ETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHE-AKRVWKDIMASKCRPDLF 256
+ E L +K ++ L +T V+L L + + + WK + PD F
Sbjct: 123 KFDQIWELLIETKRKDRSLISP-RTMQVVLGRVAKLCSVRQTVESFWK---FKRLVPDFF 178
Query: 257 TYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQ 316
A F + +PD+ N ++ K EA F+
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW---KSSEEAEAFFE 235
Query: 317 DMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKG 376
+MK +G +P+V TYNSLI CK R +EK Y+L++ M ++ + P+ +TY+ ++ L
Sbjct: 236 EMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEET--PDVITYTTVIGGL-- 291
Query: 377 PEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTI 436
G++ D R+ EM+ GC PD +Y
Sbjct: 292 -----GLI-------------------------GQPDKAREVLKEMKEYGCYPDVAAYNA 321
Query: 437 MIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKL---VISMNSPL 479
I ++ DA + EM KG+ T L V+S+ + L
Sbjct: 322 AIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDL 367
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 180/395 (45%), Gaps = 28/395 (7%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
A+ FF++ ++ + T+ CN+++ + +M+R + ++ +M R +N +F+ L+
Sbjct: 90 AIDFFDYMVRSRPFY-TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF--------- 207
+ F HK+ ++S F + G D+ F TLL LC + +A LF
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 208 -----HSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFI 262
+ E L + T+N ++NG C+ G EA + ++ D+ TY T +
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 263 XXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERG 322
M E + KPDVVI + IID LC +A +F +M E+G
Sbjct: 269 NGMCKMGDTKSALNLLSKM--EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 323 CEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLN-SLKGPE--E 379
PNV TYN +I C R L+ DM ++ + P+ +T++ L++ S+K + E
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN--PDVLTFNALISASVKEGKLFE 384
Query: 380 VPGVLERMERNGCSLSDDI-YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMI 438
+ + M C D + YN ++ + K + D + +D M PD ++ +I
Sbjct: 385 AEKLCDEMLHR-CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTII 439
Query: 439 HGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
+ ++ + M+ RE++ +G+VA T +I
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 165/398 (41%), Gaps = 41/398 (10%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
P N +++ L R E + ++M + ++ T+ T++ + A++
Sbjct: 223 TPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALN 282
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ E+ + D+ + ++ LC+ H DA+ LF S+ E + ++ T+N +++G+
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF-SEMLEKGIAPNVFTYNCMIDGF 341
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXX---------------X 275
C G +A+R+ +D++ + PD+ T+ I
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 276 XXFRGMWNEGCN--------------CKPDVVICNCIIDALCFKKRVPEALEVFQDMKER 321
+ M C PDVV N IID C KRV E +++ +++ R
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 322 GCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPE 378
G N TYN+LI C++ + +L ++M G C P+ +T + LL + E
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM-ISHGVC-PDTITCNILLYGFCENEKLE 519
Query: 379 EVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWD---EMERNGCGPDRRSYT 435
E + E ++ + L YN+++ K D + WD + +G PD ++Y
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD---EAWDLFCSLPIHGVEPDVQTYN 576
Query: 436 IMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
+MI G + DA F +M G + T +I
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 7/242 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + N ++ K +RF++ +FD M+ + + TF+T++ + A +V+E + +
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRVDEGMQL 454
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ GL + + TL+ C ++ A+ LF + D T N++L G+C
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH-GVCPDTITCNILLYGFC 513
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
EA +++ I SK D Y I F + G +PD
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV--EPD 571
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
V N +I C K + +A +F MK+ G EP+ +TYN+LI+ K ++K EL+
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 352 DM 353
+M
Sbjct: 632 EM 633
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 143/331 (43%), Gaps = 18/331 (5%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED--TFSTLLRRFAAAHKVEEA 168
AP N ++D R+ + ++ +M RE +N D TF+ L+ K+ EA
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE--INPDVLTFNALISASVKEGKLFEA 385
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+ + D + +++ C++ +DA+ +F A D+ T+N I++
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP-----DVVTFNTIID 440
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
+C E ++ ++I + TY T I F+ M + G C
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV-C 499
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
PD + CN ++ C +++ EALE+F+ ++ + + YN +I +CK ++++ ++
Sbjct: 500 -PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPG---VLERMERNGCSLSDDIYNLVLRL 405
L + P+ TY+ +++ G + + +M+ NG + YN ++R
Sbjct: 559 LFCSLPIH--GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTI 436
+K D + EM NG D ++TI
Sbjct: 617 CLKAGEIDKSIELISEMRSNGFSGD--AFTI 645
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVF---------------QDMKERGCEPNVATYNSL 333
+PDVV N ++ LC + R+ EAL +F M E G P V T+N+L
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTL 232
Query: 334 IKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERN 390
I LC R+ + LV M K + VTY ++N + + +L +ME
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGK--GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 391 GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDA 450
IY+ ++ K + + + EM G P+ +Y MI G G+ DA
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 451 MRYFREMTSKGMVAEPRTEKLVIS 474
R R+M + + + T +IS
Sbjct: 351 QRLLRDMIEREINPDVLTFNALIS 374
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 180/395 (45%), Gaps = 28/395 (7%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
A+ FF++ ++ + T+ CN+++ + +M+R + ++ +M R +N +F+ L+
Sbjct: 90 AIDFFDYMVRSRPFY-TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF--------- 207
+ F HK+ ++S F + G D+ F TLL LC + +A LF
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 208 -----HSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFI 262
+ E L + T+N ++NG C+ G EA + ++ D+ TY T +
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 263 XXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERG 322
M E + KPDVVI + IID LC +A +F +M E+G
Sbjct: 269 NGMCKMGDTKSALNLLSKM--EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 323 CEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLN-SLKGPE--E 379
PNV TYN +I C R L+ DM ++ + P+ +T++ L++ S+K + E
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN--PDVLTFNALISASVKEGKLFE 384
Query: 380 VPGVLERMERNGCSLSDDI-YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMI 438
+ + M C D + YN ++ + K + D + +D M PD ++ +I
Sbjct: 385 AEKLCDEMLHR-CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTII 439
Query: 439 HGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
+ ++ + M+ RE++ +G+VA T +I
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 161/386 (41%), Gaps = 41/386 (10%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
P N +++ L R E + ++M + ++ T+ T++ + A++
Sbjct: 223 TPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALN 282
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ E+ + D+ + ++ LC+ H DA+ LF S+ E + ++ T+N +++G+
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF-SEMLEKGIAPNVFTYNCMIDGF 341
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXX---------------X 275
C G +A+R+ +D++ + PD+ T+ I
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 276 XXFRGMWNEGCN--------------CKPDVVICNCIIDALCFKKRVPEALEVFQDMKER 321
+ M C PDVV N IID C KRV E +++ +++ R
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 322 GCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPE 378
G N TYN+LI C++ + +L ++M G C P+ +T + LL + E
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM-ISHGVC-PDTITCNILLYGFCENEKLE 519
Query: 379 EVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWD---EMERNGCGPDRRSYT 435
E + E ++ + L YN+++ K D + WD + +G PD ++Y
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD---EAWDLFCSLPIHGVEPDVQTYN 576
Query: 436 IMIHGHYENGKMKDAMRYFREMTSKG 461
+MI G + DA F +M G
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNG 602
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 7/242 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + N ++ K +RF++ +FD M+ + + TF+T++ + A +V+E + +
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRVDEGMQL 454
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ GL + + TL+ C ++ A+ LF + D T N++L G+C
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH-GVCPDTITCNILLYGFC 513
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
EA +++ I SK D Y I F + G +PD
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV--EPD 571
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
V N +I C K + +A +F MK+ G EP+ +TYN+LI+ K ++K EL+
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 352 DM 353
+M
Sbjct: 632 EM 633
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 154/355 (43%), Gaps = 22/355 (6%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED--TFSTLLRRFAAAHKVEEA 168
AP N ++D R+ + ++ +M RE +N D TF+ L+ K+ EA
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE--INPDVLTFNALISASVKEGKLFEA 385
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+ + D + +++ C++ +DA+ +F A D+ T+N I++
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP-----DVVTFNTIID 440
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
+C E ++ ++I + TY T I F+ M + G C
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV-C 499
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
PD + CN ++ C +++ EALE+F+ ++ + + YN +I +CK ++++ ++
Sbjct: 500 -PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPG---VLERMERNGCSLSDDIYNLVLRL 405
L + P+ TY+ +++ G + + +M+ NG + YN ++R
Sbjct: 559 LFCSLPIH--GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTI-MIHGHYENGKMKDAMRYFREMTS 459
+K D + EM NG D ++TI M+ +G++ + F +M S
Sbjct: 617 CLKAGEIDKSIELISEMRSNGFSGD--AFTIKMVADLITDGRLD---KSFSDMLS 666
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVF---------------QDMKERGCEPNVATYNSL 333
+PDVV N ++ LC + R+ EAL +F M E G P V T+N+L
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTL 232
Query: 334 IKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERN 390
I LC R+ + LV M K + VTY ++N + + +L +ME
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGK--GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 391 GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDA 450
IY+ ++ K + + + EM G P+ +Y MI G G+ DA
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 451 MRYFREMTSKGMVAEPRTEKLVIS 474
R R+M + + + T +IS
Sbjct: 351 QRLLRDMIEREINPDVLTFNALIS 374
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 167/360 (46%), Gaps = 11/360 (3%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N +++ L + SRF V +M + T S+L+ F ++V +AI + E+
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G D+ + T++ C+ V DA LF R+ + D T+N ++ G C G
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD-GVRADAVTYNSLVAGLCCSGRWS 226
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
+A R+ +D++ P++ T+ I + M + PDV N
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD--PDVFTYNS 284
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
+I+ LC RV EA ++ M +GC P+V TYN+LI CK +R+++ +L +M ++
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR- 343
Query: 358 GSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
+ + +TY+ ++ P+ + RM+ + I L+ L M W +
Sbjct: 344 -GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSI--LLYGLCMNWRVEKA 400
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
L ++ M+++ D +Y I+IHG + G ++DA FR ++ KG+ + + +IS
Sbjct: 401 L-VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 164/381 (43%), Gaps = 44/381 (11%)
Query: 130 FEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRT 189
EE +F +M L + FS +L + A + + IS+F+ E G+ DL ++
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 190 LLMWLCR----------------YKHVEDAETL------------------FHSKAREFQ 215
++ LCR + + D T+ SK E
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 216 LHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXX 275
D+ +N I++G C +G ++A ++ + R D TY + +
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 276 XXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIK 335
R M + P+V+ +ID + + EA++++++M R +P+V TYNSLI
Sbjct: 230 RLMRDMVMR--DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 336 HLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGC 392
LC R+++ ++++ M K C+P+ VTY+ L+N K +E + M + G
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTK--GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 393 SLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMR 452
YN +++ Y + D ++ + M+ P+ R+Y+I+++G N +++ A+
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALV 402
Query: 453 YFREMTSKGMVAEPRTEKLVI 473
F M + + T +VI
Sbjct: 403 LFENMQKSEIELDITTYNIVI 423
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 111/246 (45%), Gaps = 10/246 (4%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED--TFSTLLRRFAAAHKVEEA 168
P ++D+ K +F E ++++EM+ R V+ D T+++L+ +V+EA
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR--CVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
M G D+ + TL+ C+ K V++ LF A+ L D T+N I+
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR-GLVGDTITYNTIIQ 357
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
G+ G A+ ++ + RP++ TY+ + F M +
Sbjct: 358 GYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENM--QKSEI 412
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
+ D+ N +I +C V +A ++F+ + +G +P+V +Y ++I C+ R+ +K
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL 472
Query: 349 LVEDME 354
L M+
Sbjct: 473 LYRKMQ 478
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 6/208 (2%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N +++ L R +E Q+ D M + L + T++TL+ F + +V+E +F Q
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
GL D + T++ + + A+ +F +I+T++++L G C+
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFS----RMDSRPNIRTYSILLYGLCMNWRVE 398
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
+A +++++ S+ D+ TY I FR + +G KPDVV
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL--KPDVVSYTT 456
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEP 325
+I C K++ ++ +++ M+E G P
Sbjct: 457 MISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 34/192 (17%)
Query: 284 EGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRM 343
E C D+ N +I+ LC R AL V M + G EP+V T +SLI C+ R+
Sbjct: 96 EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRV 155
Query: 344 EKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVL 403
+LV ME P+ V Y+ +++ G ++ V + +E
Sbjct: 156 FDAIDLVSKMEEM--GFRPDVVIYNTIID---GSCKIGLVNDAVE--------------- 195
Query: 404 RLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
+D MER+G D +Y ++ G +G+ DA R R+M + +V
Sbjct: 196 --------------LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 241
Query: 464 AEPRTEKLVISM 475
T VI +
Sbjct: 242 PNVITFTAVIDV 253
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 159/377 (42%), Gaps = 47/377 (12%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R R DW+ AL WA + +S + +DILGK +++ + + + M + LV
Sbjct: 96 RFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERM-RGDKLVT 154
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+T + ++RRFA A + EEA+ +F +FGL+ + ++ LL LC+ K VE A +
Sbjct: 155 LNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL- 213
Query: 209 SKAREFQLHRDIK----TWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXX 264
QL I T+N+ ++GWC EA +++ RP + +Y T I
Sbjct: 214 -----LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRC 268
Query: 265 XXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCE 324
M E P+ + I+ +L +K EAL V MK GC+
Sbjct: 269 YCQQFEFIKVYEMLSEM--EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCK 326
Query: 325 PNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVL 384
P+ YN LI L + R+E+ E V +E + N TY
Sbjct: 327 PDSLFYNCLIHTLARAGRLEEA-ERVFRVEMPELGVSINTSTY----------------- 368
Query: 385 ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEME-RNGCGPDRRSYTIMIHGHYE 443
N ++ +Y D +D + EME N C PD +Y ++ ++
Sbjct: 369 ---------------NSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFK 413
Query: 444 NGKMKDAMRYFREMTSK 460
G + + + +EM +K
Sbjct: 414 RGDVVEVGKLLKEMVTK 430
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 159/377 (42%), Gaps = 47/377 (12%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R R DW+ AL WA + +S + +DILGK +++ + + + M + LV
Sbjct: 96 RFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERM-RGDKLVT 154
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+T + ++RRFA A + EEA+ +F +FGL+ + ++ LL LC+ K VE A +
Sbjct: 155 LNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL- 213
Query: 209 SKAREFQLHRDIK----TWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXX 264
QL I T+N+ ++GWC EA +++ RP + +Y T I
Sbjct: 214 -----LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRC 268
Query: 265 XXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCE 324
M E P+ + I+ +L +K EAL V MK GC+
Sbjct: 269 YCQQFEFIKVYEMLSEM--EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCK 326
Query: 325 PNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVL 384
P+ YN LI L + R+E+ E V +E + N TY
Sbjct: 327 PDSLFYNCLIHTLARAGRLEEA-ERVFRVEMPELGVSINTSTY----------------- 368
Query: 385 ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEME-RNGCGPDRRSYTIMIHGHYE 443
N ++ +Y D +D + EME N C PD +Y ++ ++
Sbjct: 369 ---------------NSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFK 413
Query: 444 NGKMKDAMRYFREMTSK 460
G + + + +EM +K
Sbjct: 414 RGDVVEVGKLLKEMVTK 430
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 166/368 (45%), Gaps = 14/368 (3%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
PT + + + K +++ + + +M + N T S ++ F K+ A S
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ G + + F TL+ LC V +A L + E D+ T N ++NG C
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV-DRMVEMGHKPDLITINTLVNGLC 204
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
+ G EA + ++ C+P+ TY + R M E N K D
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM--EERNIKLD 262
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
V + IID LC + A +F +M+ +G N+ TYN LI C R + +L+
Sbjct: 263 AVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLR 322
Query: 352 DMERKKGSCMPNAVTYSCLLNS------LKGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
DM ++K + PN VT+S L++S L+ EE+ + M G + Y ++
Sbjct: 323 DMIKRKIN--PNVVTFSVLIDSFVKEGKLREAEELH---KEMIHRGIAPDTITYTSLIDG 377
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
+ K ++ D + D M GC P+ R++ I+I+G+ + ++ D + FR+M+ +G+VA+
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Query: 466 PRTEKLVI 473
T +I
Sbjct: 438 TVTYNTLI 445
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 171/382 (44%), Gaps = 21/382 (5%)
Query: 98 LVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLR 157
+V + A +Y P +L+++ K + ++ +M R ++ +S ++
Sbjct: 219 MVEYGCQPNAVTYGP-------VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 158 RFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLH 217
++ A ++F E G+ ++ + L+ C +D L + +++
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KIN 330
Query: 218 RDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXX 277
++ T++V+++ + G EA+ + K+++ PD TY + I
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 278 FRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHL 337
M ++GC+ P++ N +I+ C R+ + LE+F+ M RG + TYN+LI+
Sbjct: 391 VDLMVSKGCD--PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 338 CKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSL 394
C++ ++ EL ++M +K PN VTY LL+ L E+ + E++E++ L
Sbjct: 449 CELGKLNVAKELFQEMVSRKVP--PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506
Query: 395 SDDIYNLVLRLYMKWDNQDGLRKTWD---EMERNGCGPDRRSYTIMIHGHYENGKMKDAM 451
IYN+++ N + WD + G P ++Y IMI G + G + +A
Sbjct: 507 DIGIYNIIIH---GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 452 RYFREMTSKGMVAEPRTEKLVI 473
FR+M G + T ++I
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILI 585
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 111/245 (45%), Gaps = 3/245 (1%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
AP + ++D K + ++ +Q+ D M + N TF+ L+ + A+++++ +
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+F G+ D + TL+ C + A+ LF ++ +I T+ ++L+G
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR-KVPPNIVTYKILLDGL 483
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C G + +A +++ I SK D+ Y I F + +G KP
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG--VKP 541
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
V N +I LC K + EA +F+ M+E G P+ TYN LI+ K +L+
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601
Query: 351 EDMER 355
E+++R
Sbjct: 602 EELKR 606
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 163/369 (44%), Gaps = 12/369 (3%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
+P V N ++D L K +F E +FD M N+ T+S L+ F K++ A+S
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
GL L + + +L+ C++ + AE F ++ +L + T+ ++ G+
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG-FMAEMINKKLEPTVVTYTSLMGGY 482
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGM--WNEGCNC 288
C G ++A R++ ++ P ++T+ T + F M W N
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW----NV 538
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
KP+ V N +I+ C + + +A E ++M E+G P+ +Y LI LC + +
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSL--KGP-EEVPGVLERMERNGCSLSDDIYNLVLRL 405
V+ + KG+C N + Y+ LL+ +G EE V + M + G L Y +++
Sbjct: 599 FVDGLH--KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
+K ++ EM G PD YT MI + G K+A + M ++G V
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 466 PRTEKLVIS 474
T VI+
Sbjct: 717 EVTYTAVIN 725
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 155/405 (38%), Gaps = 43/405 (10%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
AP+ +L L + + ++F+EM+ N T++ ++ + + +A
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ G+ D ++R L+ LC +A+ +F + + + +L+G+
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDGLHKGNCELNEICYTGLLHGF 622
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C G EA V ++++ DL Y I + M + G KP
Sbjct: 623 CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL--KP 680
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
D VI +IDA EA ++ M GC PN TY ++I LCK + + L
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLC 740
Query: 351 EDMERKKGSCMPNAVTYSCLLNSL-KGP-------------------------------- 377
M+ S +PN VTY C L+ L KG
Sbjct: 741 SKMQPV--SSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFC 798
Query: 378 -----EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRR 432
EE ++ RM +G S Y ++ + ++ + W+ M G PDR
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRV 858
Query: 433 SYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISMNS 477
+Y +IHG G+M A EM +G++ +T + S ++
Sbjct: 859 AYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSNDT 903
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 129/279 (46%), Gaps = 7/279 (2%)
Query: 187 FRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDI 246
F L+ R + V D +F + L +++T + +L+G + A ++ D+
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 247 MASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKK 306
++ RPD++ Y I M GC+ ++V N +ID LC K+
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDV--NIVPYNVLIDGLCKKQ 276
Query: 307 RVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVT 366
+V EA+ + +D+ + +P+V TY +L+ LCK++ E E++++M + S P+
Sbjct: 277 KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS--PSEAA 334
Query: 367 YSCLLNSLK---GPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEME 423
S L+ L+ EE +++R+ G S + +YN ++ K +D M
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 424 RNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
+ G P+ +Y+I+I GK+ A+ + EM G+
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 166/424 (39%), Gaps = 46/424 (10%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R R LVF +K S P R + +L L K F ++F++M +
Sbjct: 168 RSRRVLDGVLVFKMMITKV-SLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPD 226
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
++ ++R + A M E G D+++ + L+ LC+ + V +A +
Sbjct: 227 VYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKK 286
Query: 209 SKAREFQLHRDIKTWNVILNGWCVL----------------------------------- 233
A + L D+ T+ ++ G C +
Sbjct: 287 DLAGK-DLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKR 345
Query: 234 GNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVV 293
G EA + K ++ P+LF Y I F M G +P+ V
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL--RPNDV 403
Query: 294 ICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDM 353
+ +ID C + ++ AL +M + G + +V YNSLI CK + + +M
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM 463
Query: 354 ERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERM-ERNGCSLSDDIYN---LVLRLYMKW 409
KK P VTY+ L+ ++ L E G ++ IY L+ L+
Sbjct: 464 INKK--LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Query: 410 DNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTE 469
+D + K ++EM P+R +Y +MI G+ E G M A + +EMT KG+V + +
Sbjct: 522 LIRDAV-KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Query: 470 KLVI 473
+ +I
Sbjct: 581 RPLI 584
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 165/360 (45%), Gaps = 8/360 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
PT N + + K ++E + + +M + + T S ++ F K+ A S
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ G + D F TLL LC V +A L + E + T N ++NG C
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVD-RMVEMGHKPTLITLNTLVNGLC 204
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
+ G +A + ++ + +P+ TY + R M E N K D
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM--EERNIKLD 262
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
V + IID LC + A +F +M+ +G + ++ TYN+LI C R + +L+
Sbjct: 263 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322
Query: 352 DMERKKGSCMPNAVTYSCLLNSL--KGP-EEVPGVLERMERNGCSLSDDIYNLVLRLYMK 408
DM ++K S PN VT+S L++S +G E +L+ M + G + + YN ++ + K
Sbjct: 323 DMIKRKIS--PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380
Query: 409 WDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRT 468
+ + + D M GC PD ++ I+I+G+ + ++ D + FREM+ +G++A T
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT 440
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 173/408 (42%), Gaps = 43/408 (10%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
+ P +L+++ K + ++ +M R ++ +S ++ ++ A
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
++F E G D+ + TL+ C +D L + ++ ++ T++V+++
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR-KISPNVVTFSVLID 341
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
+ G EA ++ K++M P+ TY + I M ++GC+
Sbjct: 342 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD- 400
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
PD++ N +I+ C R+ + LE+F++M RG N TYN+L++ C+ ++E +
Sbjct: 401 -PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERNGCSLSDDIYNLVL-- 403
L ++M ++ P+ V+Y LL+ L E+ LE ++E++ L IY +++
Sbjct: 460 LFQEMVSRR--VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG 517
Query: 404 -----RLYMKWD-------------------------NQDGLRKT---WDEMERNGCGPD 430
++ WD +D L K + +M G PD
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPD 577
Query: 431 RRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISMNSP 478
+Y I+I H + A EM S G A+ T K+VI+M S
Sbjct: 578 ELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS 625
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 100/242 (41%), Gaps = 7/242 (2%)
Query: 236 AHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVIC 295
A +A +++D++ S+ P + + + M ++G +
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGI--AHSIYTL 126
Query: 296 NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
+ +I+ C +++ A + + G EP+ +N+L+ LC R+ + ELV+ M
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 356 KKGSCMPNAVTYSCLLNSLKGPEEVPG---VLERMERNGCSLSDDIYNLVLRLYMKWDNQ 412
P +T + L+N L +V +++RM G ++ Y VL + K
Sbjct: 187 MGHK--PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 413 DGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLV 472
+ +ME D Y+I+I G ++G + +A F EM KG A+ T +
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 473 IS 474
I
Sbjct: 305 IG 306
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 156/341 (45%), Gaps = 8/341 (2%)
Query: 136 VFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLC 195
+F +M R + +S ++ ++A+S+F E G+ D+ + +L+ LC
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 196 RYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDL 255
+D + + D+ T++ +++ + G EAK ++ +++ PD
Sbjct: 292 NDGKWDDGAKMLREMIGR-NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 256 FTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVF 315
TY + I F M ++GC +PD+V + +I++ C KRV + + +F
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGC--EPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 316 QDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLK 375
+++ +G PN TYN+L+ C+ ++ EL ++M + P+ VTY LL+ L
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR--GVPPSVVTYGILLDGLC 466
Query: 376 GPEEVPGVL---ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRR 432
E+ L E+M+++ +L IYN+++ D + + G PD
Sbjct: 467 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Query: 433 SYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
+Y +MI G + G + +A FR+M G + T ++I
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 154/352 (43%), Gaps = 11/352 (3%)
Query: 125 GKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDL 184
G++S L EM R LV T STL+ +V EA+ + ++G D
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLV---TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDE 210
Query: 185 DAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWK 244
+ +L LC+ + A LF K E + + ++++++ C G+ +A ++
Sbjct: 211 VTYGPVLNRLCKSGNSALALDLFR-KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 269
Query: 245 DIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCF 304
++ + D+ TY++ I R M G N PDVV + +ID
Sbjct: 270 EMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI--GRNIIPDVVTFSALIDVFVK 327
Query: 305 KKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNA 364
+ ++ EA E++ +M RG P+ TYNSLI CK + + ++ + M K C P+
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK--GCEPDI 385
Query: 365 VTYSCLLNSLKGPEEVPG---VLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDE 421
VTYS L+NS + V + + G + YN ++ + + + ++ + E
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445
Query: 422 MERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
M G P +Y I++ G +NG++ A+ F +M M ++I
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 116/245 (47%), Gaps = 5/245 (2%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
AP + N ++D K + E +Q+FD M + + T+S L+ + A +V++ +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+F GL + + TL++ C+ + A+ LF + + T+ ++L+G
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR-GVPPSVVTYGILLDGL 465
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C G ++A +++ + S+ + Y I F + ++G KP
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV--KP 523
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIK-HLCKIRRMEKVYEL 349
DVV N +I LC K + EA +F+ MKE GC P+ TYN LI+ HL + V EL
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSV-EL 582
Query: 350 VEDME 354
+E+M+
Sbjct: 583 IEEMK 587
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 156/425 (36%), Gaps = 114/425 (26%)
Query: 115 RVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYT 174
R+ N I+DI + + +F+ M L F+ L A + + +
Sbjct: 41 RLRNGIVDI-----KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 95
Query: 175 REQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLG 234
E G++ D+ ++ CR K + A ++ +A + D T++ ++NG+C+ G
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVL-GRAWKLGYEPDTITFSTLVNGFCLEG 154
Query: 235 NAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVI 294
EA + ++ K RPDL V
Sbjct: 155 RVSEAVALVDRMVEMKQRPDL-------------------------------------VT 177
Query: 295 CNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCK----------IRRME 344
+ +I+ LC K RV EAL + M E G +P+ TY ++ LCK R+ME
Sbjct: 178 VSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKME 237
Query: 345 K--------VYELVEDMERKKGS---------------CMPNAVTYSCLLNSL------- 374
+ Y +V D K GS + VTYS L+ L
Sbjct: 238 ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWD 297
Query: 375 ---------KGPEEVPGVL----------------------ERMERNGCSLSDDIYNLVL 403
G +P V+ M G + YN ++
Sbjct: 298 DGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 357
Query: 404 RLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
+ K + + +D M GC PD +Y+I+I+ + + ++ D MR FRE++SKG++
Sbjct: 358 DGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI 417
Query: 464 AEPRT 468
T
Sbjct: 418 PNTIT 422
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 170/372 (45%), Gaps = 31/372 (8%)
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED-TFSTLLRRFAAAHKV 165
+ P + +++L+ L S+ E +F+EM R GLV + T++ ++ F A +
Sbjct: 476 GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK-RGGLVADVYTYTIMVDSFCKAGLI 534
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
E+A F + G ++ + L+ + K V A LF + E L +I T++
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP-NIVTYSA 593
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
+++G C G +A ++++ + SK PD+ Y F+ +++
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY-------------------FK-QYDDN 633
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
+P+VV ++D C RV EA ++ M GCEPN Y++LI LCK+ ++++
Sbjct: 634 SE-RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDE 692
Query: 346 VYELVEDMERKKGSCMPNAV-TYSCLLN---SLKGPEEVPGVLERMERNGCSLSDDIYNL 401
E+ +M P + TYS L++ +K + VL +M N C+ + IY
Sbjct: 693 AQEVKTEMSEHG---FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTE 749
Query: 402 VLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
++ K D K ME GC P+ +YT MI G GK++ + M SKG
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809
Query: 462 MVAEPRTEKLVI 473
+ T +++I
Sbjct: 810 VAPNYVTYRVLI 821
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 156/354 (44%), Gaps = 28/354 (7%)
Query: 126 KMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFY----TREQFGLD 181
K + +++F+ M L N T+S L+ A +VE+A +F +++ +D
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624
Query: 182 L------------DLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
+ ++ + LL C+ VE+A L + + E I ++ +++G
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI-VYDALIDG 683
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCK 289
C +G EA+ V ++ L+TY++ I M +C
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN--SCA 741
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
P+VVI +ID LC + EA ++ Q M+E+GC+PNV TY ++I I ++E EL
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSL--KGPEEVP-GVLERMERNGCSLSDDIYNLVLRLY 406
+E M K PN VTY L++ G +V +LE M++ Y V+ +
Sbjct: 802 LERMGSK--GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859
Query: 407 MK-WDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
K + GL DE+ ++ P Y ++I + +++ A+R E+ +
Sbjct: 860 NKEFIESLGL---LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 146/392 (37%), Gaps = 52/392 (13%)
Query: 110 YAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAI 169
+ P+ N ++ K R + + EMS ++ T K EA+
Sbjct: 231 FRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREAL 290
Query: 170 SMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
++ T E F D + L+ LC E+A F ++ R ++ T++ +L G
Sbjct: 291 TLVET-ENFVPDTVF--YTKLISGLCEASLFEEAMD-FLNRMRATSCLPNVVTYSTLLCG 346
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCK 289
KRV +M C P + + + + M C
Sbjct: 347 CLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK--CGHM 404
Query: 290 PDVVICNCIIDALCFKK-----------------------------------------RV 308
P V+ N +I ++C K +
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 309 PEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYS 368
+A V ++M +G P+ +TY+ ++ +LC +ME + L E+M K+G + + TY+
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM--KRGGLVADVYTYT 522
Query: 369 CLLNSLKGP---EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERN 425
+++S E+ M GC+ + Y ++ Y+K + ++ M
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 426 GCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
GC P+ +Y+ +I GH + G+++ A + F M
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 110/287 (38%), Gaps = 40/287 (13%)
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXX 268
+ ++F+ T+N ++ + A + +++ + R D FT F
Sbjct: 224 GRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKV 283
Query: 269 XXXXXXXXXFRGMWNEGC------NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERG 322
G W E N PD V +I LC EA++ M+
Sbjct: 284 -----------GKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 332
Query: 323 CEPNVATYNSLI------KHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL-- 374
C PNV TY++L+ K L + +R V +M +G C P+ ++ L+++
Sbjct: 333 CLPNVVTYSTLLCGCLNKKQLGRCKR-------VLNMMMMEG-CYPSPKIFNSLVHAYCT 384
Query: 375 KGPEEVP-GVLERMERNGCSLSDDIYNLVL------RLYMKWDNQDGLRKTWDEMERNGC 427
G +L++M + G +YN+++ + + D D K + EM G
Sbjct: 385 SGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGV 444
Query: 428 GPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
++ + + GK + A REM +G + + T V++
Sbjct: 445 VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 170/398 (42%), Gaps = 20/398 (5%)
Query: 89 RHRSDWKPALVFFNWASK--ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGL 146
R D + ++ F+ A+ A+ Y ++ L ++F+ + M +
Sbjct: 24 RAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCV 83
Query: 147 VNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETL 206
V+ED ++ R + H+ +++ +F+ + F D A+ T+L L + A
Sbjct: 84 VSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFK- 142
Query: 207 FHSKAREFQLHRDIKTWNVILNGWCVL-GNAHEAKRVWKDIMASKCRPDLFTYATFIXXX 265
F+ RE L + + NV++ C G +++ ++ C PD +TY T I
Sbjct: 143 FYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGL 202
Query: 266 XXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEP 325
F M + +C P VV +I+ LC K V EA+ ++MK +G EP
Sbjct: 203 CRFGRIDEAKKLFTEMVEK--DCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEP 260
Query: 326 NVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPG 382
NV TY+SL+ LCK R + EL E M + C PN VTY+ L+ L + +E
Sbjct: 261 NVFTYSSLMDGLCKDGRSLQAMELFEMMMAR--GCRPNMVTYTTLITGLCKEQKIQEAVE 318
Query: 383 VLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTI------ 436
+L+RM G +Y V+ + DEM G P+R ++ I
Sbjct: 319 LLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSN 378
Query: 437 -MIHGHYENGKMKDAMRYFREMTSKGMVAEPRT-EKLV 472
++ G N + A + M S+G+ E T E LV
Sbjct: 379 EVVRGLCANYPSR-AFTLYLSMRSRGISVEVETLESLV 415
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 144/332 (43%), Gaps = 14/332 (4%)
Query: 151 TFSTLLRRFAAAHKVEEAISMF--YTREQF-GLDLDLDAFRTLLMWLCRYKHVEDAETLF 207
T S +++ A VE+++++F T E G D +F +++ L + AE L
Sbjct: 15 TPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLI 74
Query: 208 -HSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXX 266
K + DI I G+ + ++ RV+ + C P Y T +
Sbjct: 75 VRMKIENCVVSEDILLS--ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILV 132
Query: 267 XXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEA-LEVFQDMKERGCEP 325
++ M G P V N +I ALC +A L++F +M +RGC+P
Sbjct: 133 EENQLNLAFKFYKNMREIGL--PPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDP 190
Query: 326 NVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGV-- 383
+ TY +LI LC+ R+++ +L +M K C P VTY+ L+N L G + V
Sbjct: 191 DSYTYGTLISGLCRFGRIDEAKKLFTEMVEK--DCAPTVVTYTSLINGLCGSKNVDEAMR 248
Query: 384 -LERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHY 442
LE M+ G + Y+ ++ K + ++ M GC P+ +YT +I G
Sbjct: 249 YLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLC 308
Query: 443 ENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+ K+++A+ M +G+ + VIS
Sbjct: 309 KEQKIQEAVELLDRMNLQGLKPDAGLYGKVIS 340
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/340 (19%), Positives = 134/340 (39%), Gaps = 87/340 (25%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P S ++ L + R +E ++F EM ++ T+++L+ + V+EA M
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA--M 247
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
Y E ++ + F T++ +++G C
Sbjct: 248 RYLEEMKSKGIEPNVF----------------------------------TYSSLMDGLC 273
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
G + +A +++ +MA CRP++ TY T
Sbjct: 274 KDGRSLQAMELFEMMMARGCRPNMVTYTT------------------------------- 302
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
+I LC ++++ EA+E+ M +G +P+ Y +I C I + + ++
Sbjct: 303 ------LITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLD 356
Query: 352 DMERKKGSCMPNAVTYSCLLNS----LKG-----PEEVPGVLERMERNGCSLS-DDIYNL 401
+M G PN +T++ + + ++G P + M G S+ + + +L
Sbjct: 357 EMIL--GGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESL 414
Query: 402 VLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGH 441
V L K + Q ++ DE+ +GC P + ++ ++I GH
Sbjct: 415 VKCLCKKGEFQKAVQLV-DEIVTDGCIPSKGTWKLLI-GH 452
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 164/385 (42%), Gaps = 52/385 (13%)
Query: 121 LDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGL 180
L +LGKM + + + +V TF +LL F +++ +A S+ + G
Sbjct: 126 LSVLGKMMK----------LGYEPSIV---TFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 181 DLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAK 240
+ ++ + TL+ LC+ + A L + ++ L D+ T+N +L G C G +A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKK-GLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 241 RVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIID 300
R+ +D+M PD+ T+ I ++ M + P+ V N II+
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD--PNNVTYNSIIN 289
Query: 301 ALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK--- 357
LC R+ +A + F M +GC PNV TYN+LI CK R +++ +L + M +
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 358 ----------GSCM--------------------PNAVTYSCLLNSLKGPEEVPGVLER- 386
G C P+ +T+ LL+ L E+ L +
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 387 --MERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYEN 444
M + + YN+++ K D + + + + G PD R+YTIMI G +N
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 445 GKMKDAMRYFREMTSKGMVAEPRTE 469
G ++A R M +G++ + E
Sbjct: 470 GPRREADELIRRMKEEGIICQMNAE 494
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 148/335 (44%), Gaps = 8/335 (2%)
Query: 129 RFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFR 188
RFE+ +F EM H + L + F+ LL A + E I E +G+ DL +F
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
L+ CR + A ++ K + I T+ +L+G+C++ +A + ++
Sbjct: 111 ILIHCFCRCSRLSFALSVL-GKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169
Query: 249 SKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRV 308
S P++ Y T I M +G DVV N ++ LC+ R
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLG--ADVVTYNTLLTGLCYSGRW 227
Query: 309 PEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYS 368
+A + +DM +R P+V T+ +LI K +++ EL ++M + S PN VTY+
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM--IQSSVDPNNVTYN 285
Query: 369 CLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERN 425
++N L + + M GC + YN ++ + K+ D K + M
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 426 GCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
G D +Y +IHG+ + GK++ A+ F M S+
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR 380
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 136/320 (42%), Gaps = 41/320 (12%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
Y P V N ++D L K ++ +EM + + T++TLL + + +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
M + ++ D+ F L+ + ++++A+ L+ + + + T+N I+N
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS-SVDPNNVTYNSIIN 289
Query: 229 GWCVLGNAHEAKRVWKDIMASK-CRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCN 287
G C+ G ++AK+ + D+MASK C P++ TY T I F+ M EG N
Sbjct: 290 GLCMHGRLYDAKKTF-DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 288 -------------CK--------------------PDVVICNCIIDALCFKKRVPEALEV 314
C+ PD++ ++ LC + AL
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 315 FQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL 374
F DM+E + YN +I LCK ++EK +EL + + P+A TY+ ++ L
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE--GVKPDARTYTIMILGL 466
Query: 375 --KGP-EEVPGVLERMERNG 391
GP E ++ RM+ G
Sbjct: 467 CKNGPRREADELIRRMKEEG 486
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 132/319 (41%), Gaps = 43/319 (13%)
Query: 159 FAAAHKVEEAISMFYT---REQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ 215
F + + E+A ++F+ + +D T L RY+ V F K +
Sbjct: 46 FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETV----IYFSQKMELYG 101
Query: 216 LHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXX 275
+ D+ ++ ++++ +C A V +M P + T+ + +
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 276 XXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIK 335
M G +P+VV+ N +ID LC + ALE+ +M+++G +V TYN+L+
Sbjct: 162 SLVILMVKSGY--EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 336 HLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLS 395
LC R ++ DM ++ S P+ VT++ L++
Sbjct: 220 GLCYSGRWSDAARMLRDMMKR--SINPDVVTFTALID----------------------- 254
Query: 396 DDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFR 455
+++K N D ++ + EM ++ P+ +Y +I+G +G++ DA + F
Sbjct: 255 ---------VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305
Query: 456 EMTSKGMVAEPRTEKLVIS 474
M SKG T +IS
Sbjct: 306 LMASKGCFPNVVTYNTLIS 324
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 109/256 (42%), Gaps = 3/256 (1%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
S P ++D+ K +E +++ EM N T+++++ ++ +A
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
F G ++ + TL+ C+++ V++ LF + E + DI T+N +++
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE-GFNADIFTYNTLIH 359
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
G+C +G A ++ +++ + PD+ T+ + F M
Sbjct: 360 GYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRES--EK 417
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
+V N +I LC +V +A E+F + G +P+ TY +I LCK + E
Sbjct: 418 YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 477
Query: 349 LVEDMERKKGSCMPNA 364
L+ M+ + C NA
Sbjct: 478 LIRRMKEEGIICQMNA 493
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 173/410 (42%), Gaps = 44/410 (10%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED 150
RS AL K Y P+ N +L+ +R E + D+M +
Sbjct: 113 RSQLSFALAILGKMMKL-GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 171
Query: 151 TFSTLLRRFAAAHKVEEAISM-----------------------------------FYTR 175
TF+TL+ +K EA+++
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
Query: 176 EQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGN 235
E+ ++ D+ + T++ LC+Y+HV+DA LF ++ + D+ T++ +++ C G
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLF-TEMDNKGIRPDVFTYSSLISCLCNYGR 290
Query: 236 AHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVIC 295
+A R+ D++ K P++ T+ + I F M + P++V
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID--PNIVTY 348
Query: 296 NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
N +I+ C R+ EA ++F M + C P+V TYN+LI CK +++ EL DM R
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 356 KKGSCMPNAVTYSCLLNSLKGPEEVPG---VLERMERNGCSLSDDIYNLVLRLYMKWDNQ 412
+ + N VTY+ L++ + V ++M +G + YN +L K
Sbjct: 409 R--GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 413 DGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
+ ++ ++++ PD +Y IM G + GK++D F ++ KG+
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 154/381 (40%), Gaps = 39/381 (10%)
Query: 129 RFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFR 188
+ +E +F EM + FS LL A K + IS E G+ +L +
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
++ LCR + A + K + I T N +LNG+C EA + ++
Sbjct: 105 IMINCLCRRSQLSFALAIL-GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 249 SKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCN-------------CK------ 289
+PD T+ T + M +GC CK
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 290 --------------PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIK 335
DVVI + +ID+LC + V +AL +F +M +G P+V TY+SLI
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 336 HLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE---EVPGVLERMERNGC 392
LC R L+ DM +K + PN VT++ L+++ E + + M +
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKIN--PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 393 SLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMR 452
+ YN ++ + D D ++ + M C PD +Y +I+G + K+ D M
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 453 YFREMTSKGMVAEPRTEKLVI 473
FR+M+ +G+V T +I
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLI 422
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 160/366 (43%), Gaps = 51/366 (13%)
Query: 152 FSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKA 211
+ST++ V++A+++F + G+ D+ + +L+ LC Y DA L S
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL-SDM 301
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
E +++ ++ T+N +++ + G EA++++ +++ P++ TY + I
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 272 XXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERG--------- 322
F M ++ +C PDVV N +I+ C K+V + +E+F+DM RG
Sbjct: 362 DEAQQIFTLMVSK--DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 323 -----------CE---------------PNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
C+ PN+ TYN+L+ LCK ++EK + E +++
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 357 KGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLS------DDI-YNLVLRLYMKW 409
K P+ TY+ + + +V + CSLS D I YN ++ + K
Sbjct: 480 KME--PDIYTYNIMSEGMCKAGKVEDGWDLF----CSLSLKGVKPDVIAYNTMISGFCKK 533
Query: 410 DNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTE 469
++ + +M+ +G PD +Y +I H +G + +EM S + T
Sbjct: 534 GLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Query: 470 KLVISM 475
LV M
Sbjct: 594 GLVTDM 599
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 125/282 (44%), Gaps = 9/282 (3%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
S P N +++ R +E Q+F M ++ L + T++TL+ F A KV +
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+ +F + GL + + TL+ + ++A+ +F + +H +I T+N +L+
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD-GVHPNIMTYNTLLD 458
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
G C G +A V++ + SK PD++TY F + +G
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG--V 516
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
KPDV+ N +I C K EA +F MKE G P+ TYN+LI+ + E
Sbjct: 517 KPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 576
Query: 349 LVEDMERKKGSC--MPNAVTYSCLLNSLKGPEEVPGVLERME 388
L+++M SC +A TY + + L G LE +
Sbjct: 577 LIKEMR----SCRFAGDASTYGLVTDMLHDGRLDKGFLEVLS 614
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 5/182 (2%)
Query: 296 NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
N +I+ LC + ++ AL + M + G P++ T NSL+ C R+ + LV+ M
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 356 KKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQ 412
P+ VT++ L++ L E ++ERM GC Y V+ K
Sbjct: 164 M--GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 413 DGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLV 472
D ++ME+ D Y+ +I + + DA+ F EM +KG+ + T +
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 473 IS 474
IS
Sbjct: 282 IS 283
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 79/171 (46%), Gaps = 5/171 (2%)
Query: 307 RVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVT 366
++ EA+++F +M + P++ ++ L+ + K+++ + V E ME S N T
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVS--HNLYT 102
Query: 367 YSCLLNSLKGPEEVP---GVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEME 423
Y+ ++N L ++ +L +M + G S N +L + + D+M
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 424 RNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
G PD ++T ++HG +++ K +A+ M KG + T VI+
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 147/318 (46%), Gaps = 11/318 (3%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
TF++L+ F +++EEA+SM + G+ D+ + T++ LC+ HV A +LF +
Sbjct: 144 TFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF-DQ 202
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
+ + D+ + ++NG C G +A + + + K +PD+ T+ I
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
+ M + P++ +I+ C + V EA ++F M+ +GC P+V Y
Sbjct: 263 FLDAEELYNEMIRM--SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS---LKGPEEVPGVLERM 387
SLI CK ++++ ++ +M +K N +TY+ L+ + P V M
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQK--GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 388 ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMER---NGCGPDRRSYTIMIHGHYEN 444
G + YN++L +++M++ +G P+ +Y +++HG N
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 445 GKMKDAMRYFREMTSKGM 462
GK++ A+ F +M + M
Sbjct: 439 GKLEKALMVFEDMRKREM 456
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 148/348 (42%), Gaps = 8/348 (2%)
Query: 129 RFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFR 188
+F E +F M L + F+ LL A K + I++ + G+ DL
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
L+ C+ A + F K + DI T+ ++NG+C+ EA + ++
Sbjct: 112 LLMNCFCQSSQPYLASS-FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 249 SKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRV 308
+PD+ Y T I F M N G +PDVV+ +++ LC R
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGI--RPDVVMYTSLVNGLCNSGRW 228
Query: 309 PEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYS 368
+A + + M +R +P+V T+N+LI K + EL +M R S PN TY+
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM--SIAPNIFTYT 286
Query: 369 CLLNS--LKG-PEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERN 425
L+N ++G +E + ME GC Y ++ + K D K + EM +
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 426 GCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
G + +YT +I G + GK A F M S+G+ RT +++
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 155/374 (41%), Gaps = 42/374 (11%)
Query: 128 SRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAF 187
+R EE + ++M + ++T++ V A+S+F E +G+ D+ +
Sbjct: 156 NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMY 215
Query: 188 RTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIM 247
+L+ LC DA++L + ++ D+ T+N +++ + G +A+ ++ +++
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKR-KIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
Query: 248 ASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKR 307
P++FTY + I F M +GC PDVV +I+ C K+
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC--FPDVVAYTSLINGFCKCKK 332
Query: 308 VPEAL-----------------------------------EVFQDMKERGCEPNVATYNS 332
V +A+ EVF M RG PN+ TYN
Sbjct: 333 VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392
Query: 333 LIKHLCKIRRMEKVYELVEDME-RKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERME 388
L+ LC +++K + EDM+ R+ PN TY+ LL+ L E+ V E M
Sbjct: 393 LLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452
Query: 389 RNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMK 448
+ + Y ++++ K + + G P+ +YT MI G + G
Sbjct: 453 KREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKH 512
Query: 449 DAMRYFREMTSKGM 462
+A FR+M G+
Sbjct: 513 EAHVLFRKMKEDGV 526
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 116/249 (46%), Gaps = 41/249 (16%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N ++D K +F + ++++EM N T+++L+ F V+EA M
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
FY E G D+ A+ +L+ C+ K V+DA +F+ +++ L + T+ ++ G+
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK-GLTGNTITYTTLIQGFG 363
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
+G + A+ V+ +++ P++ TY
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTY--------------------------------- 390
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKER---GCEPNVATYNSLIKHLCKIRRMEKVYE 348
N ++ LC+ +V +AL +F+DM++R G PN+ TYN L+ LC ++EK
Sbjct: 391 ----NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALM 446
Query: 349 LVEDMERKK 357
+ EDM +++
Sbjct: 447 VFEDMRKRE 455
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 138/292 (47%), Gaps = 12/292 (4%)
Query: 187 FRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDI 246
F LL + + K + +L K + D+ T+N+++N +C A + +
Sbjct: 88 FNRLLSAIVKLKKYDVVISL-GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKM 146
Query: 247 MASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKK 306
+ PD T + + M G KPD+V N IID+LC K
Sbjct: 147 LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY--KPDIVAYNAIIDSLCKTK 204
Query: 307 RVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVT 366
RV +A + F++++ +G PNV TY +L+ LC R L+ DM +KK + PN +T
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT--PNVIT 262
Query: 367 YSCLLNS-LKGPE--EVPGVLERMERNGCSLSDDI--YNLVLRLYMKWDNQDGLRKTWDE 421
YS LL++ +K + E + E M R S+ DI Y+ ++ D D + +D
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVR--MSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 422 MERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
M GC D SY +I+G + +++D M+ FREM+ +G+V+ T +I
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 144/323 (44%), Gaps = 37/323 (11%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
T +L+ F ++V +A+S+ + G D+ A+ ++ LC+ K V DA F
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 216
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
R+ + ++ T+ ++NG C +A R+ D++ K P++ TY+ +
Sbjct: 217 ERK-GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
F M + PD+V + +I+ LC R+ EA ++F M +GC +V +Y
Sbjct: 276 VLEAKELFEEMVRMSID--PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERN 390
N+LI CK +R+E +L +M ++ + N VTY+ L+
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQR--GLVSNTVTYNTLIQG----------------- 374
Query: 391 GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDA 450
+ + + D ++ + +M+ G PD +Y I++ G +NG+++ A
Sbjct: 375 ---------------FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 451 MRYFREMTSKGMVAEPRTEKLVI 473
+ F +M + M + T VI
Sbjct: 420 LVIFEDMQKREMDLDIVTYTTVI 442
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 3/203 (1%)
Query: 129 RFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFR 188
R +E +Q+FD M + L + +++TL+ F A +VE+ + +F Q GL + +
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
TL+ + V+ A+ F S+ F + DI T+N++L G C G +A +++D+
Sbjct: 370 TLIQGFFQAGDVDKAQEFF-SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 249 SKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRV 308
+ D+ TY T I F + +G KPD+V ++ LC K +
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL--KPDIVTYTTMMSGLCTKGLL 486
Query: 309 PEALEVFQDMKERGCEPNVATYN 331
E ++ MK+ G N T +
Sbjct: 487 HEVEALYTKMKQEGLMKNDCTLS 509
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 165/361 (45%), Gaps = 12/361 (3%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N++L + KM +F+ + + ++M N T++ L+ F ++ A+++ +
Sbjct: 89 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G + + +LL C K + DA L + E D T+ +++G + A
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALV-DQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
EA + ++ C+P+L TY + M E + +VVI +
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM--EAAKIEANVVIYST 265
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
+ID+LC + +AL +F +M+ +G PNV TY+SLI LC R L+ DM +K
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 358 GSCMPNAVTYSCLLNSLKGPE---EVPGVLERMERNGCSLSDDI--YNLVLRLYMKWDNQ 412
+ PN VT++ L+++ E + + M + S+ DI Y+ ++ + D
Sbjct: 326 IN--PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRL 381
Query: 413 DGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLV 472
D + ++ M C P+ +Y +I+G + ++ + + FREM+ +G+V T +
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 473 I 473
I
Sbjct: 442 I 442
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 153/328 (46%), Gaps = 16/328 (4%)
Query: 148 NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF 207
N +ST++ ++A+++F E G+ ++ + +L+ LC Y+ DA L
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 208 HSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXX 267
S E +++ ++ T+N +++ + G EA++++ +++ PD+FTY++ I
Sbjct: 319 -SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 268 XXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
F M ++ +C P+VV N +I+ C KR+ E +E+F++M +RG N
Sbjct: 378 HDRLDEAKHMFELMISK--DCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVL 384
TY +LI + R + + + M PN +TY+ LL+ L E+ V
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSD--GVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 385 ERMERNGCSLSDDIYNLVLRLYMKWDN-QDGLRKTWD---EMERNGCGPDRRSYTIMIHG 440
E ++R+ + YN+++ K +DG WD + G PD Y MI G
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG----WDLFCSLSLKGVKPDVIIYNTMISG 549
Query: 441 HYENGKMKDAMRYFREMTSKGMVAEPRT 468
G ++A FR+M G + + T
Sbjct: 550 FCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 161/357 (45%), Gaps = 8/357 (2%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
Y P + ++ L ++ E + D M R N T+ ++ ++ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
++ E ++ ++ + T++ LC+Y+H +DA LF ++ + ++ T++ +++
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF-TEMENKGVRPNVITYSSLIS 303
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
C +A R+ D++ K P++ T+ I + M +
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID- 362
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
PD+ + +I+ C R+ EA +F+ M + C PNV TYN+LI CK +R+++ E
Sbjct: 363 -PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
L +M ++ + N VTY+ L++ + + V ++M +G + YN +L
Sbjct: 422 LFREMSQR--GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
K + ++ ++R+ P +Y IMI G + GK++D F ++ KG+
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 536
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 3/201 (1%)
Query: 129 RFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFR 188
R +E +F+ M ++ N T++TL+ F A +++E + +F Q GL + +
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
TL+ + + ++A+ +F + +H +I T+N +L+G C G +A V++ +
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Query: 249 SKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRV 308
SK P ++TY I F + +G KPDV+I N +I C K
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG--VKPDVIIYNTMISGFCRKGLK 556
Query: 309 PEALEVFQDMKERGCEPNVAT 329
EA +F+ M+E G P+ T
Sbjct: 557 EEADALFRKMREDGPLPDSGT 577
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 1/174 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N +++ K R +E ++F EMS R + N T++TL+ F A + A +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F G+ ++ + TLL LC+ +E A +F R ++ I T+N+++ G C
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMC 516
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
G + ++ + +PD+ Y T I FR M +G
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 155/348 (44%), Gaps = 8/348 (2%)
Query: 129 RFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFR 188
+F + +F M H L + F+ LL A ++ + IS+F + G+ L
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
++ +C A + F K + D+ T+ +LNG+C +A ++ I+
Sbjct: 123 IVMHCVCLSSQPCRA-SCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG 181
Query: 249 SKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRV 308
+P++ TY T I F M G +P+VV N ++ LC R
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS--RPNVVTYNALVTGLCEIGRW 239
Query: 309 PEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYS 368
+A + +DM +R EPNV T+ +LI K+ ++ + EL M + S P+ TY
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM--SVYPDVFTYG 297
Query: 369 CLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERN 425
L+N L +E + MERNGC ++ IY ++ + K + K + EM +
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
Query: 426 GCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
G + +YT++I G+ G+ A F +M+S+ + RT +++
Sbjct: 358 GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 148/327 (45%), Gaps = 8/327 (2%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
TF++LL + +++E+AI++F G ++ + TL+ LC+ +H+ A LF+
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
++ T+N ++ G C +G +A + +D+M + P++ T+ I
Sbjct: 215 GTNGS-RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
+ M + PDV +I+ LC + EA ++F M+ GC PN Y
Sbjct: 274 LMEAKELYNVMIQM--SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS--LKG-PEEVPGVLERM 387
+LI CK +R+E ++ +M +K + N +TY+ L+ L G P+ V +M
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQK--GVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 388 ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKM 447
YN++L + ++ M + + +YTI+I G + GK+
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 448 KDAMRYFREMTSKGMVAEPRTEKLVIS 474
+DA F + SKGM T +IS
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMIS 476
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 131/279 (46%), Gaps = 46/279 (16%)
Query: 124 LGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLD 183
+GK+ +EL+ V +MS + T+ +L+ ++EA MFY E+ G +
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVF---TYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 184 LDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVW 243
+ TL+ C+ K VED +F+ +++ + I T+ V++ G+C++G A+ V+
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI-TYTVLIQGYCLVGRPDVAQEVF 386
Query: 244 KDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALC 303
+ + + PD+ TY N ++D LC
Sbjct: 387 NQMSSRRAPPDIRTY-------------------------------------NVLLDGLC 409
Query: 304 FKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPN 363
+V +AL +F+ M++R + N+ TY +I+ +CK+ ++E ++L + K PN
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK--PN 467
Query: 364 AVTYSCLLNSL--KG-PEEVPGVLERMERNGCSLSDDIY 399
+TY+ +++ +G E + ++M+ +G ++ +Y
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 166/386 (43%), Gaps = 45/386 (11%)
Query: 117 CNEILDILGKMSRFEELHQVFDEM---SHREGLVNEDTFSTLLRRFAAAHKVEEAISMFY 173
CN +L+ + S+ +M H +V TF +LL F +V +A+ MF
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV---TFGSLLNGFCRGDRVYDALYMFD 175
Query: 174 TREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVL 233
G ++ + T++ LC+ K V++A L + ++ + D+ T+N +++G C
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD-GIGPDVVTYNSLISGLCSS 234
Query: 234 GNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVV 293
G +A R+ + + PD+FT+ I + M + PD+V
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD--PDIV 292
Query: 294 ICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDM 353
+ +I LC R+ EA E+F M +GC P+V TY+ LI CK +++E +L +M
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 354 ERK-------------KGSC--------------------MPNAVTYSCLLNSL---KGP 377
++ +G C PN +TY+ LL+ L
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Query: 378 EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIM 437
E+ +L M++NG YN+++R K + + G PD +YT M
Sbjct: 413 EKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTM 472
Query: 438 IHGHYENGKMKDAMRYFREMTSKGMV 463
+ G Y+ G ++A FR+M G++
Sbjct: 473 MLGLYKKGLRREADALFRKMKEDGIL 498
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 149/336 (44%), Gaps = 12/336 (3%)
Query: 143 REGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVED 202
R N + +LR K+++++ +F+ Q + F LL + + K D
Sbjct: 40 RRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKY-D 98
Query: 203 AETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFI 262
+ + + ++ T N++LN +C A ++ P + T+ + +
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 263 XXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERG 322
F M G KP+VVI N IID LC K+V AL++ M++ G
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGY--KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216
Query: 323 CEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EE 379
P+V TYNSLI LC R +V M +++ P+ T++ L+++ E
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE--IYPDVFTFNALIDACVKEGRVSE 274
Query: 380 VPGVLERMERNGCSLSDDI--YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIM 437
E M R SL DI Y+L++ + D + + M GC PD +Y+I+
Sbjct: 275 AEEFYEEMIRR--SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Query: 438 IHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
I+G+ ++ K++ M+ F EM+ +G+V T ++I
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 130/298 (43%), Gaps = 9/298 (3%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
AL N K D P N ++ L R+ + ++ M+ RE + TF+ L+
Sbjct: 205 ALDLLNRMEK-DGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQL 216
+V EA + + LD D+ + L+ LC Y +++AE +F +
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK-GC 322
Query: 217 HRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXX 276
D+ T+++++NG+C +++ ++ + TY I
Sbjct: 323 FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEE 382
Query: 277 XFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKH 336
FR M C P+++ N ++ LC ++ +AL + DM++ G + ++ TYN +I+
Sbjct: 383 IFRRMVF--CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRG 440
Query: 337 LCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL--KGP-EEVPGVLERMERNG 391
+CK + +++ + + MP+ TY+ ++ L KG E + +M+ +G
Sbjct: 441 MCKAGEVADAWDIYCSLNCQ--GLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 13/204 (6%)
Query: 128 SRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAF 187
SR +E ++F M + + T+S L+ + + KVE + +F Q G+ + +
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 188 RTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIM 247
L+ CR + AE +F + +H +I T+NV+L+G C G +A + D+
Sbjct: 365 TILIQGYCRAGKLNVAEEIFR-RMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 248 ASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC--NCK---PDVVICNCIIDAL 302
+ D+ TY I W+ C NC+ PD+ ++ L
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADA-------WDIYCSLNCQGLMPDIWTYTTMMLGL 476
Query: 303 CFKKRVPEALEVFQDMKERGCEPN 326
K EA +F+ MKE G PN
Sbjct: 477 YKKGLRREADALFRKMKEDGILPN 500
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 168/368 (45%), Gaps = 8/368 (2%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
Y P N +L+ +R + + D+M + TF+TL+ +K EA
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+++ Q G DL + ++ LC+ + A L + K ++ ++ ++ +++
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLN-KMEAAKIEANVVIYSTVID 261
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
C + +A ++ ++ RP++ TY++ I M N
Sbjct: 262 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN- 320
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
P++V + +IDA K ++ +A +++++M +R +PN+ TY+SLI C + R+ + +
Sbjct: 321 -PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERNGCSLSDDIYNLVLRL 405
++E M RK C+PN VTY+ L+N + V +E M + G + Y ++
Sbjct: 380 MLELMIRK--DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
+ + + D + + +M G P+ +Y I++ G +NGK+ AM F + M +
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497
Query: 466 PRTEKLVI 473
T ++I
Sbjct: 498 IYTYNIMI 505
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 163/359 (45%), Gaps = 8/359 (2%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
+++L + KM++F+ + ++M N T++ L+ F ++ A+++ +
Sbjct: 82 SKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMK 141
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G + D+ +LL C + DA L + E D T+ +++G + A
Sbjct: 142 LGYEPDIVTLNSLLNGFCHGNRISDAVALV-DQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
EA + ++ C+PDL TY + M E + +VVI +
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM--EAAKIEANVVIYST 258
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
+ID+LC + +AL +F +M+ +G PNV TY+SLI LC R L+ DM +K
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 358 GSCMPNAVTYSCLLNSL--KGP-EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
+ PN VT+S L+++ KG + + E M + + Y+ ++ + D
Sbjct: 319 IN--PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
++ + M R C P+ +Y +I+G + ++ M FREM+ +G+V T +I
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 157/349 (44%), Gaps = 8/349 (2%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
Y P + ++ L ++ E + D M R + T+ ++ + A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+++ E ++ ++ + T++ LC+Y+H +DA LF ++ + ++ T++ +++
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF-TEMENKGVRPNVITYSSLIS 296
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
C G +A R+ D++ K P+L T++ I + M +
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID- 355
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
P++ + +I+ C R+ EA ++ + M + C PNV TYN+LI CK +R++K E
Sbjct: 356 -PNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
L +M ++ + N VTY+ L++ + + V ++M G + YN++L
Sbjct: 415 LFREMSQR--GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 472
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYF 454
K ++ ++R+ PD +Y IMI G + GK K YF
Sbjct: 473 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 159/359 (44%), Gaps = 14/359 (3%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
+ P +L ++ K + ++ +M R+ ++ +S ++ ++ A
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
++F E G D+ + TL+ C +D L + ++ D+ ++ +++
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALID 325
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
+ G EA+ + K+++ PD TY + I M ++GC
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG- 384
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
P++ N +I+ C + + LE+F+ M RG + TYN+LI+ C++ ++E E
Sbjct: 385 -PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
L ++M ++ P+ V+Y LL+ L PE+ + E++E++ L IYN+++
Sbjct: 444 LFQEMVSRR--VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH- 500
Query: 406 YMKWDNQDGLRKTWD---EMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
N + WD + G PD ++Y IMI G + G + +A FR+M G
Sbjct: 501 --GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 168/389 (43%), Gaps = 30/389 (7%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED 150
RS +P L+ F S+ S ++ + +LD+ +M H ++
Sbjct: 65 RSRPRPRLIDF---SRLFSVVARTKQYDLVLDLCKQMELKGIAHNLY------------- 108
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
T S ++ K+ A S + G + D F TL+ LC V +A L +
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV-DR 167
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
E + T N ++NG C+ G +A + ++ + +P+ TY +
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
R M E K D V + IID LC + A +F +M+ +G + ++ Y
Sbjct: 228 TALAMELLRKM--EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLN------SLKGPEEVPGVL 384
+LI+ C R + +L+ DM ++K + P+ V +S L++ L+ EE+
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKIT--PDVVAFSALIDCFVKEGKLREAEELH--- 340
Query: 385 ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYEN 444
+ M + G S Y ++ + K + D D M GCGP+ R++ I+I+G+ +
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 445 GKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
+ D + FR+M+ +G+VA+ T +I
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 163/380 (42%), Gaps = 32/380 (8%)
Query: 109 SYAPTSRVCNEILDIL---GKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
Y P + + +++ L G++S EL EM H+ L+ T + L+ KV
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI---TLNALVNGLCLNGKV 193
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
+A+ + + G + + +L +C+ A L K E ++ D +++
Sbjct: 194 SDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR-KMEERKIKLDAVKYSI 252
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
I++G C G+ A ++ ++ + D+ Y T I + G W++G
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC-----------YAGRWDDG 301
Query: 286 CN---------CKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKH 336
PDVV + +ID + ++ EA E+ ++M +RG P+ TY SLI
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
Query: 337 LCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERNGCS 393
CK +++K +++ M K C PN T++ L+N + LE +M G
Sbjct: 362 FCKENQLDKANHMLDLMVSK--GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 394 LSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRY 453
YN +++ + + + ++ + EM PD SY I++ G +NG+ + A+
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 454 FREMTSKGMVAEPRTEKLVI 473
F ++ M + ++I
Sbjct: 480 FEKIEKSKMELDIGIYNIII 499
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 145/335 (43%), Gaps = 44/335 (13%)
Query: 125 GKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDL 184
GK+ EELH+ EM R + T+++L+ F +++++A M G ++
Sbjct: 331 GKLREAEELHK---EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 185 DAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWK 244
F L+ C+ ++D LF K + D T+N ++ G+C LG AK +++
Sbjct: 388 RTFNILINGYCKANLIDDGLELFR-KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 245 DIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCF 304
++++ + RPD+ +Y + F + E + D+ I N II +C
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI--EKSKMELDIGIYNIIIHGMCN 504
Query: 305 KKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNA 364
+V +A ++F + +G +P+V TYN +I LCK KGS
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK-----------------KGSL---- 543
Query: 365 VTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMER 424
E + +ME +G S + YN+++R ++ + K +E++R
Sbjct: 544 -------------SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Query: 425 NGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
G D S M+ +G++K + F +M S
Sbjct: 591 CGFSVD-ASTVKMVVDMLSDGRLK---KSFLDMLS 621
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 111/245 (45%), Gaps = 3/245 (1%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
+P + ++D K ++ ++ + + D M + N TF+ L+ + A+ +++ +
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+F G+ D + TL+ C +E A+ LF ++ DI ++ ++L+G
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR-RVRPDIVSYKILLDGL 467
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C G +A +++ I SK D+ Y I F + +G KP
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV--KP 525
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
DV N +I LC K + EA +F+ M+E G PN TYN LI+ K +L+
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Query: 351 EDMER 355
E+++R
Sbjct: 586 EEIKR 590
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 168/381 (44%), Gaps = 6/381 (1%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R + D + AL FF WA + Y V +L++L K + +V M R
Sbjct: 182 RSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRT 241
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+ FS ++ ++ A ++ +A+ + ++ G++ +L T + R +E A F
Sbjct: 242 PEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKA-LRFL 300
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXX 268
+ + + ++ T+N ++ G+C L EA + +D+ + C PD +Y T +
Sbjct: 301 ERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKE 360
Query: 269 XXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVA 328
+ M E PD V N +I L EAL +D +E+G +
Sbjct: 361 KRIVEVRDLMKKMAKEH-GLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKL 419
Query: 329 TYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS---LKGPEEVPGVLE 385
Y++++ LCK RM + +L+ +M KG C P+ VTY+ ++N L ++ +L+
Sbjct: 420 GYSAIVHALCKEGRMSEAKDLINEM-LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 478
Query: 386 RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENG 445
M +G + Y +L + R+ + E + P+ +Y++++HG G
Sbjct: 479 VMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREG 538
Query: 446 KMKDAMRYFREMTSKGMVAEP 466
K+ +A REM KG P
Sbjct: 539 KLSEACDVVREMVLKGFFPGP 559
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 169/400 (42%), Gaps = 41/400 (10%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P +CN +D+ + +R E+ + + M + N T++ ++R + H+VEEAI +
Sbjct: 275 PNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIEL 334
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
G D ++ T++ +LC+ K + + L A+E L D T+N +++
Sbjct: 335 LEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLT 394
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
+A EA KD R D Y+ + M ++G +C PD
Sbjct: 395 KHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG-HCPPD 453
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
VV +++ C V +A ++ Q M G +PN +Y +L+ +C+ + + E++
Sbjct: 454 VVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMN 513
Query: 352 DMERKKGSCMPNAVTYSCLLNSLK----------------------GPEEVPGVLERMER 389
E S PN++TYS +++ L+ GP E+ +L+ + R
Sbjct: 514 MSEEHWWS--PNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR 571
Query: 390 N----------------GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRS 433
+ GC+++ + V+ + + D D D+M D +
Sbjct: 572 DGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFT 631
Query: 434 YTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
YT ++ + G++ +A ++M KG+ P T + VI
Sbjct: 632 YTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 671
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 111/265 (41%), Gaps = 8/265 (3%)
Query: 124 LGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLD 183
LG++ + ++L QV H+ V +++ LL K EA M E+ +
Sbjct: 467 LGEVDKAKKLLQVMHTHGHKPNTV---SYTALLNGMCRTGKSLEAREMMNMSEEHWWSPN 523
Query: 184 LDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVW 243
+ ++ L R + +A + + ++ N++L C G HEA++
Sbjct: 524 SITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEI-NLLLQSLCRDGRTHEARKFM 582
Query: 244 KDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALC 303
++ + C ++ + T I M+ N DV ++D L
Sbjct: 583 EECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYL--INKHADVFTYTTLVDTLG 640
Query: 304 FKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDM-ERKKGSCMP 362
K R+ EA E+ + M +G +P TY ++I C++ +++ + ++E M R+K +
Sbjct: 641 KKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIY 700
Query: 363 NAVTYS-CLLNSLKGPEEVPGVLER 386
N V C+L L+ + + G + R
Sbjct: 701 NQVIEKLCVLGKLEEADTLLGKVLR 725
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 161/360 (44%), Gaps = 9/360 (2%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
K D PT R ++ L R E + EM N T++ L+ + K
Sbjct: 315 KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
E+A + + GL ++ + L+ C+ +EDA + +L + +T+N
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR-KLSPNTRTYNE 433
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
++ G+C N H+A V ++ K PD+ TY + I M + G
Sbjct: 434 LIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
PD +ID+LC KRV EA ++F ++++G PNV Y +LI CK ++++
Sbjct: 493 L--VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDE 550
Query: 346 VYELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLERMERNGCSLSDDIYNLV 402
+ ++E M K +C+PN++T++ L++ L +E + E+M + G + ++
Sbjct: 551 AHLMLEKMLSK--NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 403 LRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
+ +K + D + +M +G PD +YT I + G++ DA +M G+
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 160/349 (45%), Gaps = 11/349 (3%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N +L+ L + +E+ QV+ EM + N T++ ++ + VEEA +
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
GLD D + +L+M C+ K ++ A +F+ + R+ + +++G CV
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLK-GCRRNEVAYTHLIHGLCVARRID 305
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
EA ++ + +C P + TY I + M G KP++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG--IKPNIHTYTV 363
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
+ID+LC + + +A E+ M E+G PNV TYN+LI CK +E ++VE ME +K
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 358 GSCMPNAVTYSCLLNSL--KGPEEVPGVLERM-ERNGCSLSDDI-YNLVLRLYMKWDNQD 413
S PN TY+ L+ + GVL +M ER L D + YN ++ + N D
Sbjct: 424 LS--PNTRTYNELIKGYCKSNVHKAMGVLNKMLERK--VLPDVVTYNSLIDGQCRSGNFD 479
Query: 414 GLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
+ M G PD+ +YT MI ++ ++++A F + KG+
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 143/328 (43%), Gaps = 42/328 (12%)
Query: 175 REQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLG 234
R + L + + TLL L R+ V++ + ++ + E ++ +I T+N ++NG+C LG
Sbjct: 174 RFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM-EMLEDKVCPNIYTYNKMVNGYCKLG 232
Query: 235 NAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVI 294
N EA + I+ + PD FTY + I F M +GC + + V
Sbjct: 233 NVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGC--RRNEVA 290
Query: 295 CNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDME 354
+I LC +R+ EA+++F MK+ C P V TY LIK LC R + LV++ME
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 355 R----------------------------------KKGSCMPNAVTYSCLLNSL--KG-P 377
+KG MPN +TY+ L+N +G
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG-LMPNVITYNALINGYCKRGMI 409
Query: 378 EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIM 437
E+ V+E ME S + YN +++ Y K + + +ER PD +Y +
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERK-VLPDVVTYNSL 468
Query: 438 IHGHYENGKMKDAMRYFREMTSKGMVAE 465
I G +G A R M +G+V +
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPD 496
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 144/347 (41%), Gaps = 42/347 (12%)
Query: 129 RFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFR 188
R +E +F +M E T++ L++ + + EA+++ E+ G+ ++ +
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
L+ LC E A L + E L ++ T+N ++NG+C G +A V + + +
Sbjct: 363 VLIDSLCSQCKFEKARELL-GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 249 SKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCK--PDVVICNCIIDALCFKK 306
K P+ TY I G+ N+ K PDVV N +ID C
Sbjct: 422 RKLSPNTRTYNELIKGYCKSNVHKAM-----GVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 307 RVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVT 366
A + M +RG P+ TY S+I LCK +R+E+ +L + +E+K + PN V
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN--PNVVM 534
Query: 367 YSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNG 426
Y+ L++ Y K D ++M
Sbjct: 535 YTALIDG--------------------------------YCKAGKVDEAHLMLEKMLSKN 562
Query: 427 CGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
C P+ ++ +IHG +GK+K+A +M G+ T+ ++I
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 170/420 (40%), Gaps = 64/420 (15%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N ++D + F+ +++ M+ R + ++ T+++++ + +VEEA +
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F + EQ G++ ++ + L+ C+ V++A + + L + T+N +++G C
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL-TFNALIHGLC 578
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
G EA + + ++ +P + T I F+ M + G KPD
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT--KPD 636
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIK---------------- 335
I C + R+ +A ++ M+E G P++ TY+SLIK
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Query: 336 ----------------------------------HLCKIRRMEKVYELVEDMERK-KGSC 360
LC + M + +VE +E+ + S
Sbjct: 697 RMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSV 756
Query: 361 MPNAVTYS------CLLNSLKGPEEVPGVLERMERN-GCSLSDDIYNLVLRLYMKWDNQD 413
PNA +Y C + +L+ E+ V + M+RN G S S+ ++N +L K +
Sbjct: 757 TPNAKSYEKLILGICEVGNLRVAEK---VFDHMQRNEGISPSELVFNALLSCCCKLKKHN 813
Query: 414 GLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
K D+M G P S ++I G Y+ G+ + F+ + G + K++I
Sbjct: 814 EAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIII 873
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 150/390 (38%), Gaps = 39/390 (10%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + ++D K + +E H + ++M + L N TF+ L+ A K++EA +
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 589
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ GL + L+ L + + A + F D T+ + +C
Sbjct: 590 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHTYTTFIQTYC 648
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
G +A+ + + + PDLFTY++ I + M + GC +P
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC--EPS 706
Query: 292 VVICNCIID---------------ALCFKKRVPE---ALEVFQDMKERGCEPNVATYNSL 333
+I LC + E +E+ + M E PN +Y L
Sbjct: 707 QHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKL 766
Query: 334 IKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLN---SLKGPEEVPGVLERM--- 387
I +C++ + ++ + M+R +G P+ + ++ LL+ LK E V++ M
Sbjct: 767 ILGICEVGNLRVAEKVFDHMQRNEG-ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICV 825
Query: 388 ----ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYE 443
+ C + L+ LY K + + G + + + G D ++ I+I G +
Sbjct: 826 GHLPQLESCKV------LICGLYKKGEKERG-TSVFQNLLQCGYYEDELAWKIIIDGVGK 878
Query: 444 NGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
G ++ F M G +T L+I
Sbjct: 879 QGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 179/436 (41%), Gaps = 51/436 (11%)
Query: 52 VQNLLKFRRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASKADSYA 111
+ NLL+ P +E ALD G R S F WA +
Sbjct: 73 ISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFT 132
Query: 112 PTSRVCNEILDILGKMSRFE-ELHQVFDEMSHREG--LVNEDTFSTLLRRFAAAHKVEEA 168
+ + + +++ L K FE VFD + EG LV+ DTF L+RR+A A V++A
Sbjct: 133 LSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQA 192
Query: 169 ISMFYTREQF----GLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLH--RDIKT 222
I F + +L LL LC+ HV +A + ++
Sbjct: 193 IRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRI 252
Query: 223 WNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMW 282
+N++LNGW +A+++W+++ A
Sbjct: 253 FNILLNGWFRSRKLKQAEKLWEEMKA---------------------------------- 278
Query: 283 NEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRR 342
N KP VV +I+ C +RV A+EV ++MK E N +N +I L + R
Sbjct: 279 ---MNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGR 335
Query: 343 MEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPG---VLERMERNGCSLSDDIY 399
+ + ++E + P VTY+ L+ + ++PG +L+ M G + Y
Sbjct: 336 LSEALGMMERFFVCESG--PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTY 393
Query: 400 NLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
N + + K + + + ++ G PDR +Y +++ E+GK+ AM+ +EM +
Sbjct: 394 NHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKN 453
Query: 460 KGMVAEPRTEKLVISM 475
+G+ + T ++I +
Sbjct: 454 RGIDPDLLTTTMLIHL 469
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 121/270 (44%), Gaps = 9/270 (3%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
++ P+ R+ N +L+ + + ++ ++++EM T+ TL+ + +V+ A
Sbjct: 245 NWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIA 304
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREF--QLHRDIKTWNVI 226
+ + + ++++ F ++ L + +A + R F + I T+N +
Sbjct: 305 MEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMME---RFFVCESGPTIVTYNSL 361
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC 286
+ +C G+ A ++ K +M P TY F + + G
Sbjct: 362 VKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGH 421
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKV 346
+ PD + + I+ LC ++ A++V ++MK RG +P++ T LI LC++ +E+
Sbjct: 422 S--PDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEA 479
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLNSLKG 376
+E ++ R+ +P +T+ + N L+
Sbjct: 480 FEEFDNAVRR--GIIPQYITFKMIDNGLRS 507
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 166/435 (38%), Gaps = 72/435 (16%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
+ P V N ++D + + ++ D M + + T++TL++ + + + A
Sbjct: 360 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDA-----ETLF---------------- 207
+ G +++ +F +++ LC + + A E L
Sbjct: 420 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479
Query: 208 ------HSKARE--FQLHR-----DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
HSKA E FQ D +T N +L+G C G EA R+ K+I+ C D
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 255 LFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC---------------------------- 286
+Y T I M G
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 287 NCK-----PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIR 341
+CK PDV + +ID C +R E E F +M + +PN YN LI+ C+
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 342 RMEKVYELVEDMERKKGSCMPNAVTYSCLLNS---LKGPEEVPGVLERMERNGCSLSDDI 398
R+ EL EDM+ K S PN+ TY+ L+ + EE + E M G +
Sbjct: 660 RLSMALELREDMKHKGIS--PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 717
Query: 399 YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMT 458
Y ++ Y K + EM P++ +YT+MI G+ +G + +A R EM
Sbjct: 718 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 777
Query: 459 SKGMVAEPRTEKLVI 473
KG+V + T K I
Sbjct: 778 EKGIVPDSITYKEFI 792
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 159/364 (43%), Gaps = 16/364 (4%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
AP N ++D LG R++E ++M R T+S L++ A ++ +A
Sbjct: 292 APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYF 351
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDA---ETLFHSKAREFQLHRDIKTWNVIL 227
+ + G ++ + L+ + A + L SK L T+N ++
Sbjct: 352 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG----LSLTSSTYNTLI 407
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCN 287
G+C G A A+R+ K++++ + ++ + I M N
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR--N 465
Query: 288 CKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVY 347
P + +I LC + +ALE++ +G + T N+L+ LC+ ++++ +
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 348 ELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLERMERNGCSLSDDIYNLVLR 404
+ +++ + C+ + V+Y+ L++ G +E L+ M + G + Y++++
Sbjct: 526 RIQKEILGR--GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583
Query: 405 LYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVA 464
+ + + WD+ +RNG PD +Y++MI G + + ++ +F EM SK +
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV-- 641
Query: 465 EPRT 468
+P T
Sbjct: 642 QPNT 645
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 149/341 (43%), Gaps = 7/341 (2%)
Query: 136 VFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLC 195
VF ++++ ++ T + LL A++ ++ F + G+ D+ F T + C
Sbjct: 213 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFC 271
Query: 196 RYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDL 255
+ VE+A LF SK E + ++ T+N +++G + G EA + ++ P L
Sbjct: 272 KGGKVEEAVKLF-SKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL 330
Query: 256 FTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVF 315
TY+ + + M +G P+V++ N +ID+ + +A+E+
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGF--PPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 316 QDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVT-YSCLLNS- 373
M +G +TYN+LIK CK + + L+++M + + T CLL S
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 374 LKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRS 433
L + V E + RN + L+ L + L + W + G D R+
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL-ELWFQFLNKGFVVDTRT 507
Query: 434 YTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
++HG E GK+ +A R +E+ +G V + + +IS
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 166/435 (38%), Gaps = 72/435 (16%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
+ P V N ++D + + ++ D M + + T++TL++ + + + A
Sbjct: 360 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDA-----ETLF---------------- 207
+ G +++ +F +++ LC + + A E L
Sbjct: 420 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479
Query: 208 ------HSKARE--FQLHR-----DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
HSKA E FQ D +T N +L+G C G EA R+ K+I+ C D
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 255 LFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC---------------------------- 286
+Y T I M G
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 287 NCK-----PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIR 341
+CK PDV + +ID C +R E E F +M + +PN YN LI+ C+
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 342 RMEKVYELVEDMERKKGSCMPNAVTYSCLLNS---LKGPEEVPGVLERMERNGCSLSDDI 398
R+ EL EDM+ K S PN+ TY+ L+ + EE + E M G +
Sbjct: 660 RLSMALELREDMKHKGIS--PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 717
Query: 399 YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMT 458
Y ++ Y K + EM P++ +YT+MI G+ +G + +A R EM
Sbjct: 718 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 777
Query: 459 SKGMVAEPRTEKLVI 473
KG+V + T K I
Sbjct: 778 EKGIVPDSITYKEFI 792
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 159/364 (43%), Gaps = 16/364 (4%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
AP N ++D LG R++E ++M R T+S L++ A ++ +A
Sbjct: 292 APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYF 351
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDA---ETLFHSKAREFQLHRDIKTWNVIL 227
+ + G ++ + L+ + A + L SK L T+N ++
Sbjct: 352 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG----LSLTSSTYNTLI 407
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCN 287
G+C G A A+R+ K++++ + ++ + I M N
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR--N 465
Query: 288 CKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVY 347
P + +I LC + +ALE++ +G + T N+L+ LC+ ++++ +
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 348 ELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLERMERNGCSLSDDIYNLVLR 404
+ +++ + C+ + V+Y+ L++ G +E L+ M + G + Y++++
Sbjct: 526 RIQKEILGR--GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583
Query: 405 LYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVA 464
+ + + WD+ +RNG PD +Y++MI G + + ++ +F EM SK +
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV-- 641
Query: 465 EPRT 468
+P T
Sbjct: 642 QPNT 645
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 149/341 (43%), Gaps = 7/341 (2%)
Query: 136 VFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLC 195
VF ++++ ++ T + LL A++ ++ F + G+ D+ F T + C
Sbjct: 213 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFC 271
Query: 196 RYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDL 255
+ VE+A LF SK E + ++ T+N +++G + G EA + ++ P L
Sbjct: 272 KGGKVEEAVKLF-SKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL 330
Query: 256 FTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVF 315
TY+ + + M +G P+V++ N +ID+ + +A+E+
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGF--PPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 316 QDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVT-YSCLLNS- 373
M +G +TYN+LIK CK + + L+++M + + T CLL S
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 374 LKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRS 433
L + V E + RN + L+ L + L + W + G D R+
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL-ELWFQFLNKGFVVDTRT 507
Query: 434 YTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
++HG E GK+ +A R +E+ +G V + + +IS
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 149/352 (42%), Gaps = 41/352 (11%)
Query: 108 DSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEE 167
D + P ++D L K F E D M + L N T++TL+ H++++
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 168 AISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS--KAREFQLHRDIKTWNV 225
A+ +F E G+ T ++++ Y D+ + + K + + +I N
Sbjct: 417 ALELFGNMESLGVK---PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
L G EAK+++ + PD TY + M G
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
C +PDV++ N +I+ L RV EA ++F MKE +P V TYN+L+ L K ++++
Sbjct: 534 C--EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 346 VYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
EL E M +K C PN +T++ L + L +EV L L++
Sbjct: 592 AIELFEGMVQK--GCPPNTITFNTLFDCLCKNDEV-------------------TLALKM 630
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
K M GC PD +Y +I G +NG++K+AM +F +M
Sbjct: 631 LFK-------------MMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 147/356 (41%), Gaps = 70/356 (19%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
K+ P N +LD GK + +EL +++ EMS E N T + ++ A V
Sbjct: 812 KSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 871
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
++A+ ++Y DL + R C T+
Sbjct: 872 DDALDLYY---------DLMSDRDFSPTAC--------------------------TYGP 896
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
+++G G +EAK++++ ++ CRP+ Y I F+ M EG
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
+PD+ + ++D LC RV E L F+++KE G P+V YN +I L K R+E+
Sbjct: 957 V--RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEE 1014
Query: 346 VYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
L +M+ +G P+ TY+ L+ +L G+ +E G
Sbjct: 1015 ALVLFNEMKTSRG-ITPDLYTYNSLILNL-------GIAGMVEEAG-------------- 1052
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
K ++E++R G P+ ++ +I G+ +GK + A ++ M + G
Sbjct: 1053 -----------KIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1097
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 164/373 (43%), Gaps = 8/373 (2%)
Query: 93 DWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTF 152
D + +F + + T+ CN +L+ L + EE+ VFD M R + +T+
Sbjct: 97 DTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTY 156
Query: 153 STLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAR 212
T+ + + +++A +FG L+ ++ L+ L + + +A ++
Sbjct: 157 LTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMIL 216
Query: 213 EFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXX 272
E ++T++ ++ G + + K++ +P+++T+ I
Sbjct: 217 E-GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275
Query: 273 XXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNS 332
+ M +EGC PDVV +IDALC +++ A EVF+ MK +P+ TY +
Sbjct: 276 EAYEILKRMDDEGCG--PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYIT 333
Query: 333 LIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMER 389
L+ R ++ V + +ME K +P+ VT++ L+++L E L+ M
Sbjct: 334 LLDRFSDNRDLDSVKQFWSEME--KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD 391
Query: 390 NGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKD 449
G + YN ++ ++ D + + ME G P +Y + I + ++G
Sbjct: 392 QGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS 451
Query: 450 AMRYFREMTSKGM 462
A+ F +M +KG+
Sbjct: 452 ALETFEKMKTKGI 464
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 160/373 (42%), Gaps = 10/373 (2%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
K AP CN L L K R E Q+F + + + T++ +++ ++ ++
Sbjct: 460 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 519
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
+EAI + + G + D+ +L+ L + V++A +F + +E +L + T+N
Sbjct: 520 DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM-RMKEMKLKPTVVTYNT 578
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
+L G G EA +++ ++ C P+ T+ T M + G
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
C PDV N II L +V EA+ F MK+ P+ T +L+ + K +E
Sbjct: 639 --CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIED 695
Query: 346 VYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNG-CSLSDDIYNL 401
Y+++ + P + + L+ S+ G + ER+ NG C D I
Sbjct: 696 AYKIITNFLYNCAD-QPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP 754
Query: 402 VLRLYMKWDNQDGLRKTWDEMERN-GCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
++R K +N G R +++ ++ G P +Y ++I G E ++ A F ++ S
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 461 GMVAEPRTEKLVI 473
G + + T ++
Sbjct: 815 GCIPDVATYNFLL 827
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 170/391 (43%), Gaps = 23/391 (5%)
Query: 95 KPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHR-----EGLVNE 149
K A+ FF+ K Y +C + ++ K S E+ +++ + L E
Sbjct: 660 KEAMCFFHQMKKL-VYPDFVTLCTLLPGVV-KASLIEDAYKIITNFLYNCADQPANLFWE 717
Query: 150 DTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRT-LLMWLCRYKHVEDAETLFH 208
D ++L A ++ A+S G+ D D+ ++ + C++ +V A TLF
Sbjct: 718 DLIGSIL----AEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFE 773
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXX 268
++ + + T+N+++ G A+ V+ + ++ C PD+ TY +
Sbjct: 774 KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKS 833
Query: 269 XXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQD-MKERGCEPNV 327
++ M C+ + + N +I L V +AL+++ D M +R P
Sbjct: 834 GKIDELFELYKEMSTH--ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVP---GVL 384
TY LI L K R+ + +L E M C PN Y+ L+N E +
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDY--GCRPNCAIYNILINGFGKAGEADAACALF 949
Query: 385 ERMERNGCSLSDDIYNLVLR-LYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYE 443
+RM + G Y++++ L M +GL + E++ +G PD Y ++I+G +
Sbjct: 950 KRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH-YFKELKESGLNPDVVCYNLIINGLGK 1008
Query: 444 NGKMKDAMRYFREM-TSKGMVAEPRTEKLVI 473
+ ++++A+ F EM TS+G+ + T +I
Sbjct: 1009 SHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 150/391 (38%), Gaps = 41/391 (10%)
Query: 108 DSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEE 167
+ + P+ + + ++ LGK + + + EM N TF+ +R A K+ E
Sbjct: 217 EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 168 AISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF-------HSKAR-------- 212
A + + G D+ + L+ LC + ++ A+ +F H R
Sbjct: 277 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336
Query: 213 EFQLHRD-------------------IKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRP 253
F +RD + T+ ++++ C GN EA + P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 254 DLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALE 313
+L TY T I F M E KP ID ALE
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNM--ESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 314 VFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLL-- 371
F+ MK +G PN+ N+ + L K R + ++ + K +P++VTY+ ++
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL--KDIGLVPDSVTYNMMMKC 512
Query: 372 -NSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPD 430
+ + +E +L M NGC + N ++ K D D K + M+ P
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 572
Query: 431 RRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
+Y ++ G +NGK+++A+ F M KG
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 11/239 (4%)
Query: 99 VFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRR 158
++++ S D ++PT+ ++D L K R E Q+F+ M N ++ L+
Sbjct: 877 LYYDLMSDRD-FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 159 FAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHR 218
F A + + A ++F + G+ DL + L+ LC V++ F + +E L+
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK-ELKESGLNP 994
Query: 219 DIKTWNVILNGWCVLGNAH---EAKRVWKDIMASK-CRPDLFTYATFIXXXXXXXXXXXX 274
D+ +N+I+NG LG +H EA ++ ++ S+ PDL+TY + I
Sbjct: 995 DVVCYNLIING---LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 275 XXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSL 333
+ + G +P+V N +I + A V+Q M G PN TY L
Sbjct: 1052 GKIYNEIQRAGL--EPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 118/294 (40%), Gaps = 7/294 (2%)
Query: 183 DLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRV 242
DL + + L + + + + F S A L +T N +L V G E V
Sbjct: 81 DLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYV 140
Query: 243 WKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDAL 302
+ + + D TY T R M G + N +I L
Sbjct: 141 FDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVL--NAYSYNGLIHLL 198
Query: 303 CFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMP 362
+ EA+EV++ M G P++ TY+SL+ L K R ++ V L+++ME P
Sbjct: 199 LKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETL--GLKP 256
Query: 363 NAVTYSC---LLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTW 419
N T++ +L E +L+RM+ GC Y +++ D ++ +
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 316
Query: 420 DEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
++M+ PDR +Y ++ +N + +++ EM G V + T +++
Sbjct: 317 EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 130/285 (45%), Gaps = 9/285 (3%)
Query: 187 FRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDI 246
+ LL L R+ VE+ + L+ ++ E + DI T+N ++NG+C LG EAK+ +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLY-TEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWL 181
Query: 247 MASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKK 306
+ + C PD FTY +FI F+ M GC+ + V +I L K
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCH--RNEVSYTQLIYGLFEAK 239
Query: 307 RVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVT 366
++ EAL + MK+ C PNV TY LI LC + + L + M + P+
Sbjct: 240 KIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMS--ESGIKPDDCM 297
Query: 367 YSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEME 423
Y+ L+ S +E G+LE M NG + YN +++ + K + + +E
Sbjct: 298 YTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKMLE 357
Query: 424 RNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRT 468
+N PD +Y +I G +G + A R M G+V RT
Sbjct: 358 QNLV-PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 8/278 (2%)
Query: 200 VEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYA 259
V+ T+ + E + K +N +L+ G E KR++ +++ PD++T+
Sbjct: 100 VDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFN 159
Query: 260 TFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMK 319
T + + GC+ PD I C +K V A +VF++M
Sbjct: 160 TLVNGYCKLGYVVEAKQYVTWLIQAGCD--PDYFTYTSFITGHCRRKEVDAAFKVFKEMT 217
Query: 320 ERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP-- 377
+ GC N +Y LI L + +++++ L+ M K +C PN TY+ L+++L G
Sbjct: 218 QNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKM--KDDNCCPNVRTYTVLIDALCGSGQ 275
Query: 378 -EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTI 436
E + ++M +G D +Y ++++ + D D + M NG P+ +Y
Sbjct: 276 KSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNA 335
Query: 437 MIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+I G + K AM +M + +V + T +I+
Sbjct: 336 LIKGFCKKNVHK-AMGLLSKMLEQNLVPDLITYNTLIA 372
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 118/272 (43%), Gaps = 14/272 (5%)
Query: 106 KADS----YAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED--TFSTLLRRF 159
K DS Y T + N +L L + EE+ +++ EM E LV+ D TF+TL+ +
Sbjct: 108 KGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEM--LEDLVSPDIYTFNTLVNGY 165
Query: 160 AAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRD 219
V EA Q G D D + + + CR K V+ A +F + HR+
Sbjct: 166 CKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQN-GCHRN 224
Query: 220 IKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFR 279
++ ++ G EA + + C P++ TY I F+
Sbjct: 225 EVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFK 284
Query: 280 GMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCK 339
M G KPD + +I + C + EA + + M E G PNV TYN+LIK CK
Sbjct: 285 QMSESG--IKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK 342
Query: 340 IRRMEKVYELVEDMERKKGSCMPNAVTYSCLL 371
+ + K L+ M + + +P+ +TY+ L+
Sbjct: 343 -KNVHKAMGLLSKMLEQ--NLVPDLITYNTLI 371
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 158/364 (43%), Gaps = 13/364 (3%)
Query: 105 SKADSYAPTSRVCNEILDILGKMSR---FEELHQVFDEMSHREGLVNEDTFSTLLRRFAA 161
++A + P N +LD + R F E VF EM + N T++ L+R F
Sbjct: 160 AQAHGFMPGVLSYNAVLDATIRSKRNISFAE--NVFKEMLESQVSPNVFTYNILIRGFCF 217
Query: 162 AHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIK 221
A ++ A+++F E G ++ + TL+ C+ + ++D L S A + L ++
Sbjct: 218 AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK-GLEPNLI 276
Query: 222 TWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGM 281
++NV++NG C G E V ++ D TY T I M
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 282 WNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIR 341
G P V+ +I ++C + A+E M+ RG PN TY +L+ +
Sbjct: 337 LRHGLT--PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 342 RMEKVYELVEDMERKKGSCMPNAVTYSCLLNS--LKGP-EEVPGVLERMERNGCSLSDDI 398
M + Y ++ +M S P+ VTY+ L+N + G E+ VLE M+ G S
Sbjct: 395 YMNEAYRVLREMNDNGFS--PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 399 YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMT 458
Y+ VL + + + D + EM G PD +Y+ +I G E + K+A + EM
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 459 SKGM 462
G+
Sbjct: 513 RVGL 516
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 157/343 (45%), Gaps = 10/343 (2%)
Query: 136 VFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLC 195
+FD+M + L N T++TL+ + K+++ + + GL+ +L ++ ++ LC
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 196 RYKHVEDAE-TLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
R +++ L R + L D T+N ++ G+C GN H+A + +++ P
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSL--DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344
Query: 255 LFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEV 314
+ TY + I M G C P+ ++D K + EA V
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL-C-PNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 315 FQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL 374
++M + G P+V TYN+LI C +ME ++EDM+ K S P+ V+YS +L+
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS--PDVVSYSTVLSGF 460
Query: 375 ---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDR 431
+E V M G Y+ +++ + + ++EM R G PD
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 432 RSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+YT +I+ + G ++ A++ EM KG++ + T ++I+
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 175/409 (42%), Gaps = 30/409 (7%)
Query: 89 RHRSDWKPALVFFNWASKADSYA-----------------PTSRVCNEILDILGKMSRFE 131
+ ++D L F NWA+ + T+++ E D+ K E
Sbjct: 57 KSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAE--DVAAKTLDDE 114
Query: 132 ELHQVFDEMSHREGLV--NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRT 189
VF + L F +++ ++ +++A+S+ + + G + ++
Sbjct: 115 YASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNA 174
Query: 190 LLMWLCRYK-HVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
+L R K ++ AE +F + E Q+ ++ T+N+++ G+C GN A ++ +
Sbjct: 175 VLDATIRSKRNISFAENVF-KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET 233
Query: 249 SKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRV 308
C P++ TY T I R M +G +P+++ N +I+ LC + R+
Sbjct: 234 KGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL--EPNLISYNVVINGLCREGRM 291
Query: 309 PEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYS 368
E V +M RG + TYN+LIK CK + LV E + P+ +TY+
Sbjct: 292 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA--LVMHAEMLRHGLTPSVITYT 349
Query: 369 CLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERN 425
L++S+ L++M G ++ Y ++ + + + + EM N
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 426 GCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
G P +Y +I+GH GKM+DA+ +M KG+ + + V+S
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 168/403 (41%), Gaps = 56/403 (13%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N +++ L + R +E+ V EM+ R ++E T++TL++ + +A+ M +
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDA-------------------ETL---FHSKAREFQ 215
GL + + +L+ +C+ ++ A TL F K +
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 216 LHR------------DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIX 263
+R + T+N ++NG CV G +A V +D+ PD+ +Y+T +
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 264 XXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGC 323
R M +G KPD + + +I C ++R EA +++++M G
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGI--KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 324 EPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE---EV 380
P+ TY +LI C +EK +L +M K +P+ VTYS L+N L E
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEK--GVLPDVVTYSVLINGLNKQSRTREA 574
Query: 381 PGVLERMERNGCSLSDDIYNLVLR-----------LYMKWDNQDGLRKTWDEMERNGCG- 428
+L ++ SD Y+ ++ +K G+ D++ + G
Sbjct: 575 KRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK 634
Query: 429 ---PDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRT 468
PD +Y IMIHGH G ++ A ++EM G + T
Sbjct: 635 NHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVT 677
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 153/344 (44%), Gaps = 29/344 (8%)
Query: 108 DSYAPTSRVCNEILD---ILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHK 164
+ ++P+ N +++ + GKM E+ V ++M + + ++ST+L F ++
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKM---EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 165 VEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWN 224
V+EA+ + + G+ D + +L+ C + ++A L+ R L D T+
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR-VGLPPDEFTYT 524
Query: 225 VILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNE 284
++N +C+ G+ +A ++ +++ PD+ TY+ I ++ E
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 285 GCNCKPDV----VICNC----------IIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
+ DV +I NC +I C K + EA +VF+ M + +P+ Y
Sbjct: 585 E-SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLERM 387
N +I C+ + K Y L ++M K + + VT L+ +L E+ V+ +
Sbjct: 644 NIMIHGHCRAGDIRKAYTLYKEM--VKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV 701
Query: 388 ERNGCSLSD-DIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPD 430
R+ C LS+ + +++ + + N D + EM ++G P+
Sbjct: 702 LRS-CELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 154/352 (43%), Gaps = 12/352 (3%)
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVE 166
A+ + P V N +++ L K ++ ++ EM + N ++STL+ + ++E
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 167 EAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
A S + G ++ +L+ DA L++ R F L ++ +N +
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC 286
+ G+C GN +A V+ + C P++ TY + I + M GC
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGC 418
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRM--- 343
C P+VV+ +++ALC + EA + + M + C P+V T+N+ IK LC R+
Sbjct: 419 -C-PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 344 EKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLERMERNGCSLSDDIYN 400
EKV+ +E R C PN VTY+ LL+ L EE G+ + G S YN
Sbjct: 477 EKVFRQMEQQHR----CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYN 532
Query: 401 LVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMR 452
+L + +M +G PD + ++I + + GK + A +
Sbjct: 533 TLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQ 584
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 166/382 (43%), Gaps = 24/382 (6%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R S AL FF + ++ + T ++ L + + + + +M + +
Sbjct: 51 RQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCS 110
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
ED F +++ + E A+ MFY ++FG D + + +L L ++ ++
Sbjct: 111 EDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYR 170
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXX 268
R+ ++ T+NV+L C AK++ ++ C PD +Y T I
Sbjct: 171 DMKRD-GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEV 229
Query: 269 XXXXXXXXXFRGMWNEGCNC----KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCE 324
G+ EG +P V + N +I+ LC + A E+ ++M E+G
Sbjct: 230 -----------GLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGIS 278
Query: 325 PNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS--LKGPE-EVP 381
PNV +Y++LI LC ++E + + M ++ C PN T S L+ L+G +
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKR--GCHPNIYTLSSLVKGCFLRGTTFDAL 336
Query: 382 GVLERMERNGCSLSDDI--YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIH 439
+ +M R G L ++ YN +++ + N + ME GC P+ R+Y +I+
Sbjct: 337 DLWNQMIR-GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 440 GHYENGKMKDAMRYFREMTSKG 461
G + G + A+ + +M + G
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSG 417
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 163/388 (42%), Gaps = 44/388 (11%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGL-VNEDTFSTLLRRFAAAHKVEEAIS 170
P+ ++ N +LD L +R + ++ V+ +M R+G N T++ LL+ +KV+ A
Sbjct: 144 PSVKIYNHVLDTLLGENRIQMIYMVYRDMK-RDGFEPNVFTYNVLLKALCKNNKVDGAKK 202
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF--------------------HSK 210
+ G D ++ T++ +C V++ L H
Sbjct: 203 LLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDY 262
Query: 211 AREFQLHR---------DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATF 261
F+L R ++ +++ ++N C G A ++ C P+++T ++
Sbjct: 263 KGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSL 322
Query: 262 IXXXXXXXXXXXXXXXFRGMWNE---GCNCKPDVVICNCIIDALCFKKRVPEALEVFQDM 318
+ +WN+ G +P+VV N ++ C + +A+ VF M
Sbjct: 323 VKGCFLRGTTFDALD----LWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHM 378
Query: 319 KERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---K 375
+E GC PN+ TY SLI K ++ + M C PN V Y+ ++ +L
Sbjct: 379 EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM--LTSGCCPNVVVYTNMVEALCRHS 436
Query: 376 GPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNG-CGPDRRSY 434
+E ++E M + C+ S +N ++ D K + +ME+ C P+ +Y
Sbjct: 437 KFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTY 496
Query: 435 TIMIHGHYENGKMKDAMRYFREMTSKGM 462
++ G + ++++A RE+ +G+
Sbjct: 497 NELLDGLAKANRIEEAYGLTREIFMRGV 524
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 162/385 (42%), Gaps = 49/385 (12%)
Query: 130 FEELHQVFDEMSHREGLVNEDTF--STLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAF 187
E LH + E R+G N D + L++ F + +A+ + E+FG D+ A+
Sbjct: 106 IESLHLL--ETMVRKG-YNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAY 161
Query: 188 RTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIM 247
L+ C+ ++DA T + R D T+N+++ C G A +V ++
Sbjct: 162 NALINGFCKMNRIDDA-TRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 248 ASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKR 307
+ C+P + TY I M + G KPD+ N II +C +
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL--KPDMFTYNTIIRGMCKEGM 278
Query: 308 VPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTY 367
V A E+ ++++ +GCEP+V +YN L++ L + E+ +L+ M +K C PN VTY
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK--CDPNVVTY 336
Query: 368 SCLLNSL---KGPEEVPGVLERMERNGCS-----------------------------LS 395
S L+ +L EE +L+ M+ G + +S
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 396 D----DI--YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKD 449
D DI YN VL K D + + ++ GC P+ SY M + +G
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 450 AMRYFREMTSKGMVAEPRTEKLVIS 474
A+ EM S G+ + T +IS
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMIS 481
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 150/348 (43%), Gaps = 16/348 (4%)
Query: 131 EELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTL 190
+E ++ DEM R + T++T++R V+ A M E G + D+ ++ L
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 191 LMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASK 250
L L E+ E L E + ++ T+++++ C G EA + K +
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSE-KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 251 CRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPE 310
PD ++Y I M ++GC PD+V N ++ LC + +
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC--LPDIVNYNTVLATLCKNGKADQ 421
Query: 311 ALEVFQDMKERGCEPNVATYNSLIKHL----CKIRRMEKVYELVEDMERKKGSCMPNAVT 366
ALE+F + E GC PN ++YN++ L KIR + + E++ + P+ +T
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN------GIDPDEIT 475
Query: 367 YSCLLNSLKGPEEVPGVLERM-ERNGCSLSDDI--YNLVLRLYMKWDNQDGLRKTWDEME 423
Y+ +++ L V E + + C + YN+VL + K + + M
Sbjct: 476 YNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535
Query: 424 RNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKL 471
NGC P+ +YT++I G G +AM ++ ++E ++L
Sbjct: 536 GNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRL 583
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 9/259 (3%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N +L L ++EE ++ +M + N T+S L+ K+EEA+++ ++
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
GL D ++ L+ CR ++ A + + L DI +N +L C G A
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP-DIVNYNTVLATLCKNGKAD 420
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
+A ++ + C P+ +Y T M + G + PD + N
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID--PDEITYNS 478
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCE--PNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
+I LC + V EA E+ DM R CE P+V TYN ++ CK R+E ++E M
Sbjct: 479 MISCLCREGMVDEAFELLVDM--RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM-- 534
Query: 356 KKGSCMPNAVTYSCLLNSL 374
C PN TY+ L+ +
Sbjct: 535 VGNGCRPNETTYTVLIEGI 553
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 166/377 (44%), Gaps = 15/377 (3%)
Query: 92 SDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDT 151
SD L FN K D P+ + N ++D L K R + Q+FDEM R L + T
Sbjct: 193 SDVGKGLELFNRM-KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLIT 251
Query: 152 FSTLLRRFAAAHKVEEAISMFYTREQFGLD---LDLDAFRTLLMWLCRYKHVEDAETLFH 208
++TL+ + A E++ F RE+ D L F TLL L + VEDAE +
Sbjct: 252 YNTLIDGYCKAGNPEKS---FKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK 308
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXX 268
+ ++ D T++++ +G+ A A V++ + S + + +T + +
Sbjct: 309 -EMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKE 367
Query: 269 XXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVA 328
+G P+ VI N +ID C K + A + M+++G +P+
Sbjct: 368 GKIEKAEEILGREMAKG--LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425
Query: 329 TYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVP---GVLE 385
YN LI+ C++ ME + V M+ K S P+ TY+ L+ E +L+
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVS--PSVETYNILIGGYGRKYEFDKCFDILK 483
Query: 386 RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENG 445
ME NG + Y ++ K + +ME G P R Y ++I G G
Sbjct: 484 EMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG 543
Query: 446 KMKDAMRYFREMTSKGM 462
K++DA R+ +EM KG+
Sbjct: 544 KIEDAFRFSKEMLKKGI 560
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 174/388 (44%), Gaps = 23/388 (5%)
Query: 90 HRSDWKPALVFFNWASKADSYAP-TSRVCNEILDILGKMSRFEELHQVFD-EMSHREGLV 147
+ S+ K + + DS + C+ +L+ L K + E+ ++ EM+ +GLV
Sbjct: 329 YSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMA--KGLV 386
Query: 148 -NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETL 206
NE ++T++ + + A E+ G+ D A+ L+ C +E+AE
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKE 446
Query: 207 FHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKR---VWKDIMASKCRPDLFTYATFIX 263
+ K + + ++T+N+++ G+ G +E + + K++ + P++ +Y T I
Sbjct: 447 VN-KMKLKGVSPSVETYNILIGGY---GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Query: 264 XXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGC 323
R M + G + P V I N +ID C K ++ +A ++M ++G
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGVS--PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGI 560
Query: 324 EPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVP-- 381
E N+ TYN+LI L ++ + +L+ ++ RK P+ TY+ L++ V
Sbjct: 561 ELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRK--GLKPDVFTYNSLISGYGFAGNVQRC 618
Query: 382 -GVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHG 440
+ E M+R+G + Y+L++ L K +G+ T PD Y ++H
Sbjct: 619 IALYEEMKRSGIKPTLKTYHLLISLCTK----EGIELTERLFGEMSLKPDLLVYNGVLHC 674
Query: 441 HYENGKMKDAMRYFREMTSKGMVAEPRT 468
+ +G M+ A ++M K + + T
Sbjct: 675 YAVHGDMEKAFNLQKQMIEKSIGLDKTT 702
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 139/317 (43%), Gaps = 12/317 (3%)
Query: 150 DTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS 209
+T++ L+ + ++ ++ + E G ++ ++ TL+ LC+ + +A+ +
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ-IVKR 518
Query: 210 KAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXX 269
+ + ++ +N++++G C G +A R K+++ +L TY T I
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTG 578
Query: 270 XXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVAT 329
+ +G KPDV N +I F V + ++++MK G +P + T
Sbjct: 579 KLSEAEDLLLEISRKGL--KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKT 636
Query: 330 YNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLN--SLKGP-EEVPGVLER 386
Y+ LI LC +E L +M K P+ + Y+ +L+ ++ G E+ + ++
Sbjct: 637 YHLLI-SLCTKEGIELTERLFGEMSLK-----PDLLVYNGVLHCYAVHGDMEKAFNLQKQ 690
Query: 387 MERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGK 446
M L YN ++ +K +R DEM P+ +Y I++ GH E
Sbjct: 691 MIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKD 750
Query: 447 MKDAMRYFREMTSKGMV 463
A ++REM KG +
Sbjct: 751 YMSAYVWYREMQEKGFL 767
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 120/281 (42%), Gaps = 8/281 (2%)
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
++ L + L K + +A LF + R ++ + ++L+ V+ +
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFA-LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169
Query: 246 IMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFK 305
I+ S RP F Y I F M ++ P V I N +ID LC
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHD--RIYPSVFIYNVLIDGLCKG 227
Query: 306 KRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAV 365
KR+ +A ++F +M R P++ TYN+LI CK EK +++ E M K P+ +
Sbjct: 228 KRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM--KADHIEPSLI 285
Query: 366 TYSCLLNSLKGP---EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEM 422
T++ LL L E+ VL+ M+ G ++++ Y + + ++
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 423 ERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
+G + + +I+++ + GK++ A +KG+V
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV 386
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 166/383 (43%), Gaps = 19/383 (4%)
Query: 100 FFNWASKADSYAPTSRVC------NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
FF+ + S VC + I+DI + ++ +F EM L + FS
Sbjct: 38 FFSSCERDFSSISNGNVCFRERLRSGIVDI-----KKDDAIALFQEMIRSRPLPSLVDFS 92
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
A + + E G+ ++ ++ CR A ++ K +
Sbjct: 93 RFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL-GKVMK 151
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXX 273
D T+N ++ G + G EA + ++ + C+PD+ TY + +
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 211
Query: 274 XXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSL 333
R M E N K DV + IID+LC + A+ +F++M+ +G + +V TYNSL
Sbjct: 212 ALDLLRKM--EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 334 IKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLERMERN 390
++ LCK + L++DM ++ +PN +T++ LL+ +E + + M
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSRE--IVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 391 GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDA 450
G S + YN ++ Y + D M RN C PD ++T +I G+ ++ D
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 451 MRYFREMTSKGMVAEPRTEKLVI 473
M+ FR ++ +G+VA T +++
Sbjct: 388 MKVFRNISKRGLVANAVTYSILV 410
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 140/314 (44%), Gaps = 8/314 (2%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
T+ST++ ++ AIS+F E G+ + + +L+ LC+ D L
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
++ ++ T+NV+L+ + G EA ++K+++ P++ TY T +
Sbjct: 290 VSR-EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
M C PD+V +I C KRV + ++VF+++ +RG N TY
Sbjct: 349 LSEANNMLDLMVRN--KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERM 387
+ L++ C+ +++ EL ++M +P+ +TY LL+ L E+ + E +
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSH--GVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 388 ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKM 447
+++ L +Y ++ K + + + G P+ +YT+MI G + G +
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 448 KDAMRYFREMTSKG 461
+A R+M G
Sbjct: 525 SEANILLRKMEEDG 538
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 159/356 (44%), Gaps = 17/356 (4%)
Query: 127 MSRFEELHQVFDEMSHRE--GLV-NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLD 183
++R ++ + V D E G+ N T + ++ F K A S+ + G + D
Sbjct: 98 IARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPD 157
Query: 184 LDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVW 243
F TL+ L V +A L + E D+ T+N I+NG C G+ A +
Sbjct: 158 TTTFNTLIKGLFLEGKVSEAVVLVD-RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 244 KDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALC 303
+ + + D+FTY+T I F+ M +G K VV N ++ LC
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI--KSSVVTYNSLVRGLC 274
Query: 304 FKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPN 363
+ + + +DM R PNV T+N L+ K ++++ EL ++M + S PN
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS--PN 332
Query: 364 AVTYS------CLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRK 417
+TY+ C+ N L E +L+ M RN CS + +++ Y D K
Sbjct: 333 IITYNTLMDGYCMQNRL---SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 418 TWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
+ + + G + +Y+I++ G ++GK+K A F+EM S G++ + T +++
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 153/324 (47%), Gaps = 8/324 (2%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N ++ L K ++ + + +M RE + N TF+ LL F K++EA ++
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G+ ++ + TL+ C + +A + R + DI T+ ++ G+C++
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVD 385
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
+ +V+++I + TY+ + F+ M + G PDV+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG--VLPDVMTYGI 443
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
++D LC ++ +ALE+F+D+++ + + Y ++I+ +CK ++E + L + K
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK- 502
Query: 358 GSCMPNAVTYSCLLNSL--KGP-EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
PN +TY+ +++ L KG E +L +ME +G + +D YN ++R +++ +
Sbjct: 503 -GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561
Query: 415 LRKTWDEMERNGCGPDRRSYTIMI 438
K +EM+ G D S ++I
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVI 585
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 163/371 (43%), Gaps = 14/371 (3%)
Query: 110 YAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAI 169
Y P + N ++ L + E + D M + T+++++ + A+
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 170 SMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
+ E+ + D+ + T++ LCR ++ A +LF + + + T+N ++ G
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVVTYNSLVRG 272
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCK 289
C G ++ + KD+++ + P++ T+ + ++ M G +
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS-- 330
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
P+++ N ++D C + R+ EA + M C P++ T+ SLIK C ++R++ ++
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 350 VEDMERKKGSCMPNAVTYSCLLNS------LKGPEEVPGVLERMERNGCSLSDDIYNLVL 403
++ ++ + NAVTYS L+ +K EE+ + M +G Y ++L
Sbjct: 391 FRNISKR--GLVANAVTYSILVQGFCQSGKIKLAEEL---FQEMVSHGVLPDVMTYGILL 445
Query: 404 RLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
+ + +++++++ YT +I G + GK++DA F + KG+
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 464 AEPRTEKLVIS 474
T ++IS
Sbjct: 506 PNVMTYTVMIS 516
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 111/244 (45%), Gaps = 3/244 (1%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
+P N ++D +R E + + D M + + TF++L++ + +V++ +
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+F + GL + + L+ C+ ++ AE LF L D+ T+ ++L+G
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP-DVMTYGILLDGL 448
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C G +A +++D+ SK + Y T I F + +G KP
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV--KP 506
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
+V+ +I LC K + EA + + M+E G PN TYN+LI+ + + +L+
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 566
Query: 351 EDME 354
E+M+
Sbjct: 567 EEMK 570
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 167/390 (42%), Gaps = 35/390 (8%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P S N +L K+ E+ +F+ + + L + +++ L+ K EA ++
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
G+ + ++ L+ LC+ + DA+T+ R + D T+ +L+G+C
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRN-GVCPDAVTYGCLLHGYC 407
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
+G AK + +++M + C P+ +T + R M +G D
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL--D 465
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMK-----------------------ERGCEPNVA 328
V CN I+D LC + +A+E+ + M+ E C P++
Sbjct: 466 TVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI 525
Query: 329 TYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPG---VLE 385
TY++L+ LCK R + L +M +K P++V Y+ ++ ++ VL+
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEK--LQPDSVAYNIFIHHFCKQGKISSAFRVLK 583
Query: 386 RMERNGCSLSDDIYN-LVLRLYMKWDNQD-GLRKTWDEMERNGCGPDRRSYTIMIHGHYE 443
ME+ GC S + YN L+L L +K NQ + DEM+ G P+ +Y I E
Sbjct: 584 DMEKKGCHKSLETYNSLILGLGIK--NQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 444 NGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
K++DA EM K + + K +I
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 155/361 (42%), Gaps = 12/361 (3%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
AP + N ++ L S + ++FDEM + NE TF L+R + A ++ +
Sbjct: 144 APQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ E FG+ + + T++ CR +D+E + K RE L DI T+N ++
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVE-KMREEGLVPDIVTFNSRISAL 262
Query: 231 CVLGNAHEAKRVWKDIMASKC----RPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC 286
C G +A R++ D+ + RP+ TY + F +
Sbjct: 263 CKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREN-- 320
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKV 346
+ + N + L + EA V + M ++G P++ +YN L+ LCK+ +
Sbjct: 321 DDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLN---SLKGPEEVPGVLERMERNGCSLSDDIYNLVL 403
+V M+R G C P+AVTY CLL+ S+ + +L+ M RN C + N++L
Sbjct: 381 KTIVGLMKR-NGVC-PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILL 438
Query: 404 RLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
K + +M G G D + I++ G +G++ A+ + M G
Sbjct: 439 HSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSA 498
Query: 464 A 464
A
Sbjct: 499 A 499
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 152/377 (40%), Gaps = 32/377 (8%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
P+ N ++D L K+ + + M + T+ LL + + KV+ A S
Sbjct: 358 GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKS 417
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ + + LL L + + +AE L K E D T N+I++G
Sbjct: 418 LLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLR-KMNEKGYGLDTVTCNIIVDGL 476
Query: 231 CVLGNAHEAKRVWK-----------------------DIMASKCRPDLFTYATFIXXXXX 267
C G +A + K ++ + C PDL TY+T +
Sbjct: 477 CGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCK 536
Query: 268 XXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
F M E +PD V N I C + ++ A V +DM+++GC ++
Sbjct: 537 AGRFAEAKNLFAEMMGE--KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSL 594
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVL 384
TYNSLI L ++ +++ L+++M+ K S PN TY+ + L + E+ +L
Sbjct: 595 ETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS--PNICTYNTAIQYLCEGEKVEDATNLL 652
Query: 385 ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYEN 444
+ M + + + + ++ + K + D ++ + E + CG Y++M +
Sbjct: 653 DEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAA 711
Query: 445 GKMKDAMRYFREMTSKG 461
G++ A + +G
Sbjct: 712 GQLLKATELLEAVLDRG 728
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
KP V + N ++++ ++RV +++DM G P T+N LI+ LC ++ E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSL-------KGPEEVPGVLERMERNGCSLSDDIYNL 401
L ++M K C PN T+ L+ KG E +L ME G + IYN
Sbjct: 169 LFDEMPEK--GCKPNEFTFGILVRGYCKAGLTDKGLE----LLNAMESFGVLPNKVIYNT 222
Query: 402 VLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
++ + + D K ++M G PD ++ I + GK+ DA R F +M
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 462 MVAEPRTEKLVISM 475
+ PR + ++
Sbjct: 283 YLGLPRPNSITYNL 296
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 162/360 (45%), Gaps = 9/360 (2%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
+++L + KM++F+ + + ++M + N T+S + F ++ A+++ +
Sbjct: 79 SKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMK 138
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G + +LL C + +A L + E D T+ +++G A
Sbjct: 139 LGYGPSIVTLNSLLNGFCHGNRISEAVALV-DQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
EA + + ++ C+PDL TY I M E + DVVI N
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM--EKGKIEADVVIYNT 255
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
IID LC K + +A ++F M+ +G +P+V TYN LI LC R L+ DM K
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK- 314
Query: 358 GSCMPNAVTYSCLLNSLKGPE---EVPGVLERMERNGCSLSDDI-YNLVLRLYMKWDNQD 413
+ P+ V ++ L+++ E + + M ++ D + YN +++ + K+ +
Sbjct: 315 -NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 414 GLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
+ + EM + G + +YT +IHG ++ +A F++M S G+ + T +++
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILL 433
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 157/373 (42%), Gaps = 39/373 (10%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED 150
RS AL K Y P+ N +L+ +R E + D+M +
Sbjct: 123 RSQLSLALAILGKMMKL-GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 181
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
TF+TL+ +K EA+++ G DL + ++ LC+ + A L + K
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN-K 240
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
+ ++ D+ +N I++G C + +A ++ + +PD+FTY I
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR 300
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDM-KERGCEPNVAT 329
M + N PD+V N +IDA + ++ EA +++ +M K + C P+V
Sbjct: 301 WSDASRLLSDMLEK--NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 330 YNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMER 389
YN+LIK CK +R+E+ E+ +M ++ + N VTY+ L++
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQR--GLVGNTVTYTTLIHG---------------- 400
Query: 390 NGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKD 449
+ + + D + + +M +G PD +Y I++ G NG ++
Sbjct: 401 ----------------FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Query: 450 AMRYFREMTSKGM 462
A+ F M + M
Sbjct: 445 ALVVFEYMQKRDM 457
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 147/330 (44%), Gaps = 10/330 (3%)
Query: 116 VCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTR 175
+ N I+D L K ++ +F++M + + T++ L+ + +A +
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 176 EQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGN 235
+ ++ DL F L+ + + +AE L+ + D+ +N ++ G+C
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 236 AHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVIC 295
E V++++ + TY T I F+ M ++G + PD++
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH--PDIMTY 429
Query: 296 NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
N ++D LC V AL VF+ M++R + ++ TY ++I+ LCK ++E ++L +
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489
Query: 356 KKGSCMPNAVTYSCLLNSL--KG-PEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQ 412
K PN VTY+ +++ KG EE + M+ +G + YN ++R ++ ++
Sbjct: 490 K--GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDE 547
Query: 413 DGLRKTWDEMERNGCGPDRRSY---TIMIH 439
+ EM G D ++ T M+H
Sbjct: 548 AASAELIKEMRSCGFAGDASTFGLVTNMLH 577
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 98/240 (40%), Gaps = 7/240 (2%)
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
+A ++ D++ S+ P + ++ + M N G + ++ +
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS--HNLYTYSI 115
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
I+ C + ++ AL + M + G P++ T NSL+ C R+ + LV+ M
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM- 174
Query: 358 GSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
P+ VT++ L++ L E ++ERM GC Y V+ K D
Sbjct: 175 -GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
++ME+ D Y +I G + M DA F +M +KG+ + T +IS
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 5/171 (2%)
Query: 307 RVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVT 366
++ +A+ +F DM + P++ ++ L+ + K+ + + V L E M+ S N T
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS--HNLYT 112
Query: 367 YSCLLNSLKGPEEVP---GVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEME 423
YS +N ++ +L +M + G S N +L + + D+M
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 424 RNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
G PD ++T ++HG +++ K +A+ M KG + T VI+
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 166/356 (46%), Gaps = 12/356 (3%)
Query: 113 TSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV-NEDTFSTLLRRFAAAHKVEEAISM 171
+ R N +L++L + RF+ +H +F G+ N T + L++ + +E A +
Sbjct: 154 SVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKV 213
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
GL +L + T+L +E A+ + + + + D T+ V+++G+C
Sbjct: 214 LDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLE-EMLDRGWYPDATTYTVLMDGYC 272
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
LG EA V D+ ++ P+ TY I F M + PD
Sbjct: 273 KLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLER--SFMPD 330
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
+C +IDALC +V EA +++ M + C P+ A ++LI LCK R+ + +L +
Sbjct: 331 SSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFD 390
Query: 352 DMERKKGSCMPNAVTYSCLLNSL--KGPEEVPGVL-ERMERNGCSLSDDIYNLVLRLYMK 408
+ E KGS +P+ +TY+ L+ + KG G L + M C + YN+++ K
Sbjct: 391 EFE--KGS-IPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSK 447
Query: 409 WDN-QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
N ++G+R +EM GC P++ ++ I+ G + GK +DAM+ G V
Sbjct: 448 NGNVKEGVR-VLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKV 502
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 159/367 (43%), Gaps = 11/367 (2%)
Query: 97 ALVFFNWASKAD-SYAPTSRVCNEILDILGKMSRFEELHQVFDEM--SHREGLVNEDTFS 153
AL F +A K+ + + IL L + F+ + + ++ S+ E+ F
Sbjct: 65 ALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFI 124
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
LLR + A + E ++ +F FG+ + + TLL L + + + +F +
Sbjct: 125 DLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKES 184
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXX 273
F + +I T N+++ C + A +V +I + P+L TY T +
Sbjct: 185 FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMES 244
Query: 274 XXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSL 333
M + G PD ++D C R EA V DM++ EPN TY +
Sbjct: 245 AKRVLEEMLDRG--WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 334 IKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERN 390
I+ LCK ++ + + ++M + S MP++ ++++L +E G+ +M +N
Sbjct: 303 IRALCKEKKSGEARNMFDEMLER--SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKN 360
Query: 391 GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDA 450
C + + + ++ K RK +DE E+ G P +Y +I G E G++ +A
Sbjct: 361 NCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEA 419
Query: 451 MRYFREM 457
R + +M
Sbjct: 420 GRLWDDM 426
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 4/242 (1%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
+ P + ++D K+ RF E V D+M E NE T+ ++R K EA
Sbjct: 256 GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEA 315
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+MF + D ++ LC V++A L+ K + D + +++
Sbjct: 316 RNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWR-KMLKNNCMPDNALLSTLIH 374
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
C G EA++++ D P L TY T I + M+ C
Sbjct: 375 WLCKEGRVTEARKLF-DEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYER--KC 431
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
KP+ N +I+ L V E + V ++M E GC PN T+ L + L K+ + E +
Sbjct: 432 KPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMK 491
Query: 349 LV 350
+V
Sbjct: 492 IV 493
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 6/174 (3%)
Query: 296 NCIIDALCFKKRVPEALEVFQDMKER-GCEPNVATYNSLIKHLCKIRRMEKVYELVEDME 354
N +++ L +R +F++ KE G PN+ T N L+K LCK +E Y++++++
Sbjct: 159 NTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIP 218
Query: 355 RKKGSCMPNAVTYSCLLNSLKG---PEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDN 411
+PN VTY+ +L E VLE M G Y +++ Y K
Sbjct: 219 SM--GLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGR 276
Query: 412 QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
D+ME+N P+ +Y +MI + K +A F EM + + +
Sbjct: 277 FSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPD 330
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 167/386 (43%), Gaps = 17/386 (4%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDT--FST 154
AL F + +K PTS N ++ +L + + E++H+V+ EM + EG DT +S
Sbjct: 181 ALSVF-YQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN-EGDCFPDTITYSA 238
Query: 155 LLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREF 214
L+ + + + AI +F + + + TLL + VE A LF R
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA- 297
Query: 215 QLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXX 274
+ T+ ++ G G EA +KD++ PD+ +
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
Query: 275 XXXFR--GMWNEGCNCKPDVVICNCIIDALC-FKKRVPEALEVFQDMKERGCEPNVATYN 331
F GMW C P VV N +I AL K V E F MK P+ TY+
Sbjct: 358 TNVFSEMGMWR----CTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYS 413
Query: 332 SLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERME 388
LI CK R+EK L+E+M+ K P A Y L+N+L K E + + ++
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA--YCSLINALGKAKRYEAANELFKELK 471
Query: 389 RNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMK 448
N ++S +Y ++++ + K ++EM+ G GPD +Y ++ G + G +
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 449 DAMRYFREMTSKGMVAEPRTEKLVIS 474
+A R+M G A+ + ++++
Sbjct: 532 EANSLLRKMEENGCRADINSHNIILN 557
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 156/387 (40%), Gaps = 40/387 (10%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + + ++ K+ R + ++FDEM E ++TLL + KVE+A+ +
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F ++ G + + L+ L + V++A + R+ L D+ N ++N
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNILG 349
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXX-FRGMWNEGCNCKP 290
+G E V+ ++ +C P + +Y T I F M + + P
Sbjct: 350 KVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS--P 407
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
+ +ID C RV +AL + ++M E+G P A Y SLI L K +R E EL
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Query: 351 EDM---------------------------------ERKKGSCMPNAVTYSCLLNSLKGP 377
+++ E K P+ Y+ L++ +
Sbjct: 468 KELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527
Query: 378 ---EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSY 434
E +L +ME NGC + +N++L + + + ++ ++ +G PD +Y
Sbjct: 528 GMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTY 587
Query: 435 TIMIHGHYENGKMKDAMRYFREMTSKG 461
++ G ++A R REM KG
Sbjct: 588 NTLLGCFAHAGMFEEAARMMREMKDKG 614
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 92/169 (54%), Gaps = 4/169 (2%)
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
++ AL K V +AL VF K R C+P +TYNS+I L + + EKV+E+ +M +
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM-CNE 226
Query: 358 GSCMPNAVTYSCLLNS---LKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
G C P+ +TYS L++S L + + + M+ N ++ IY +L +Y K +
Sbjct: 227 GDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEK 286
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
++EM+R GC P +YT +I G + G++ +A ++++M G+
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLT 335
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 151/368 (41%), Gaps = 46/368 (12%)
Query: 100 FFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGL-VNEDTFSTLLRR 158
FF WA K ++ ++ L + + E+++ E+ + V+ S L++
Sbjct: 112 FFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKA 171
Query: 159 FAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHR 218
A V +A+S+FY + + ++++ L + E ++ E
Sbjct: 172 LGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFP 231
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXF 278
D T++ +++ + LG A R++ ++ + +P Y T +
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLL---------------- 275
Query: 279 RGMWNEGCNCKPDVVICNCIIDALCFK-KRVPEALEVFQDMKERGCEPNVATYNSLIKHL 337
+ FK +V +AL++F++MK GC P V TY LIK L
Sbjct: 276 ----------------------GIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313
Query: 338 CKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKG---PEEVPGVLERMERNGCSL 394
K R+++ Y +DM R P+ V + L+N L EE+ V M C+
Sbjct: 314 GKAGRVDEAYGFYKDMLRD--GLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTP 371
Query: 395 SDDIYNLVLRLYMKWDNQDGLRKTW-DEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRY 453
+ YN V++ + +W D+M+ + P +Y+I+I G+ + +++ A+
Sbjct: 372 TVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLL 431
Query: 454 FREMTSKG 461
EM KG
Sbjct: 432 LEEMDEKG 439
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 3/183 (1%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
+++ LGK R+E +++F E+ G V+ ++ +++ F K+ EA+ +F + G
Sbjct: 450 LINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQG 509
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
D+ A+ L+ + + + +A +L K E DI + N+ILNG+ G A
Sbjct: 510 SGPDVYAYNALMSGMVKAGMINEANSLLR-KMEENGCRADINSHNIILNGFARTGVPRRA 568
Query: 240 KRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCII 299
+++ I S +PD TY T + R M ++G + D + + I+
Sbjct: 569 IEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG--FEYDAITYSSIL 626
Query: 300 DAL 302
DA+
Sbjct: 627 DAV 629
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 125/304 (41%), Gaps = 43/304 (14%)
Query: 108 DSYAPTSRVCNEILDILGKMSRFEELHQVFDEM-----------------------SHRE 144
D P N +++ILGK+ R EEL VF EM +H
Sbjct: 332 DGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVS 391
Query: 145 GLVN-------------EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLL 191
+ + E T+S L+ + ++VE+A+ + ++ G A+ +L+
Sbjct: 392 EVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 451
Query: 192 MWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKC 251
L + K E A LF F + + + V++ + G EA ++ ++
Sbjct: 452 NALGKAKRYEAANELFKELKENFG-NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGS 510
Query: 252 RPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPE- 310
PD++ Y + R M GC + D+ N I++ + VP
Sbjct: 511 GPDVYAYNALMSGMVKAGMINEANSLLRKMEENGC--RADINSHNIILNGFA-RTGVPRR 567
Query: 311 ALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCL 370
A+E+F+ +K G +P+ TYN+L+ E+ ++ +M+ K +A+TYS +
Sbjct: 568 AIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK--GFEYDAITYSSI 625
Query: 371 LNSL 374
L+++
Sbjct: 626 LDAV 629
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 163/368 (44%), Gaps = 20/368 (5%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
+ P+ +L+ + +RF+E + D M + N ++T++ + A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+ +FY E+ G+ D + TL+ L DA L + ++ ++ + +++
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIFFTALID 262
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
+ GN EA+ ++K+++ P++FTY + I F M ++G C
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG--C 320
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLC---KIRRMEK 345
PDVV N +I C KRV + +++F +M +G + TYN+LI C K+ +K
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380
Query: 346 VYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVL---ERMERNGCSLSDDIYNLV 402
V+ + D P+ VTY+ LL+ L ++ L E ++++ + YN++
Sbjct: 381 VFNRMVDC-----GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Query: 403 LRLYMKWDNQDGLRKTW---DEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
++ + D L++ W + R G PD +Y MI G G ++A + R M
Sbjct: 436 IQGLCRTDK---LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKE 492
Query: 460 KGMVAEPR 467
G + R
Sbjct: 493 DGFMPSER 500
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 144/348 (41%), Gaps = 8/348 (2%)
Query: 129 RFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFR 188
+F++ +F EM + + F+ +L A +K + I +++ E G+ DL +F
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
L+ CR + A L K + I T +LNG+C EA + +
Sbjct: 119 ILIHCFCRCSRLSLALAL-LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177
Query: 249 SKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRV 308
P++ Y T I F M +G + D V N +I L R
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI--RADAVTYNTLISGLSNSGRW 235
Query: 309 PEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYS 368
+A + +DM +R +PNV + +LI K + + L ++M R+ S +PN TY+
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR--SVVPNVFTYN 293
Query: 369 CLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERN 425
L+N + + + M GC YN ++ + K + K + EM
Sbjct: 294 SLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 353
Query: 426 GCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
G D +Y +IHG+ + GK+ A + F M G+ + T +++
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 43/288 (14%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
++D K E ++ EM R + N T+++L+ F + +A MF G
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
D+ + TL+ C+ K VED LF + L D T+N +++G+C G + A
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ-GLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 240 KRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCII 299
++V+ ++ C PD+V N ++
Sbjct: 379 QKVFNRMV-------------------------------------DCGVSPDIVTYNILL 401
Query: 300 DALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGS 359
D LC ++ +AL + +D+++ + ++ TYN +I+ LC+ ++++ + L + RK
Sbjct: 402 DCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK--G 459
Query: 360 CMPNAVTYSCLLNSL--KGPE-EVPGVLERMERNGCSLSDDIYNLVLR 404
P+A+ Y +++ L KG + E + RM+ +G S+ IY+ LR
Sbjct: 460 VKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 152/357 (42%), Gaps = 8/357 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
+L ++ KM++F+ + ++ +M + + +F+ L+ F ++ A+++ + G
Sbjct: 85 VLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG 144
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
+ +LL C+ ++A +L S F ++ +N ++NG C + + A
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDS-MDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 240 KRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCII 299
V+ + R D TY T I R M + P+V+ +I
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID--PNVIFFTALI 261
Query: 300 DALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGS 359
D + + EA ++++M R PNV TYNSLI C I + + D+ KG
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC-IHGCLGDAKYMFDLMVSKG- 319
Query: 360 CMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLR 416
C P+ VTY+ L+ K E+ + M G YN ++ Y + + +
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 417 KTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
K ++ M G PD +Y I++ NGK++ A+ ++ M + T ++I
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 152/341 (44%), Gaps = 11/341 (3%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
AL++FN +A P + + ++ + + +EM + ++ T++T+L
Sbjct: 394 ALMYFNSVKEA-GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQL 216
+ EA +F + L D L+ C+ ++++A LF K +E ++
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ-KMKEKRI 511
Query: 217 HRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXX 276
D+ T+N +L+G+ +G+ AK +W D+++ + P +Y+ +
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA-- 569
Query: 277 XFRGMWNEGC--NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLI 334
FR +W+E N KP V+ICN +I C + + M G P+ +YN+LI
Sbjct: 570 -FR-VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Query: 335 KHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNG 391
+ M K + LV+ ME ++G +P+ TY+ +L+ +E VL +M G
Sbjct: 628 YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Query: 392 CSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRR 432
+ Y ++ ++ DN + DEM + G PD +
Sbjct: 688 VNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 139/349 (39%), Gaps = 39/349 (11%)
Query: 148 NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF 207
N+ F L+R + A K+ EA F G + +DA L+ L R VE A ++
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 208 HSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXX 267
+R + ++ T N+++N C G + + PD+ TY T I
Sbjct: 224 QEISRS-GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 268 XXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
M +G + P V N +I+ LC + A EVF +M G P+
Sbjct: 283 KGLMEEAFELMNAMPGKGFS--PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 328 ATYNSLIKHLCK---IRRMEKVY------ELVEDM------------------------E 354
TY SL+ CK + EKV+ ++V D+
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 355 RKKGSCMPNAVTYSCLLNSL--KGPEEVPGVL-ERMERNGCSLSDDIYNLVLRLYMKWDN 411
K+ +P+ V Y+ L+ KG V L M + GC++ YN +L K
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 412 QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
K ++EM PD + TI+I GH + G +++AM F++M K
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 157/348 (45%), Gaps = 8/348 (2%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N +++ L K + E++ ++ + + T++TL+ +++ +EEA +
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G + + T++ LC++ E A+ +F R L D T+ +L C G+
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS-GLSPDSTTYRSLLMEACKKGDVV 357
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
E ++V+ D+ + PDL +++ + F + G PD VI
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL--IPDNVIYTI 415
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
+I C K + A+ + +M ++GC +V TYN+++ LCK + + + +L +M +
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER- 474
Query: 358 GSCMPNAVTYSCLLNS---LKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
+ P++ T + L++ L + + ++M+ L YN +L + K + D
Sbjct: 475 -ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
++ W +M P SY+I+++ G + +A R + EM SK +
Sbjct: 534 AKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 150/358 (41%), Gaps = 10/358 (2%)
Query: 104 ASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV-NEDTFSTLLRRFAAA 162
A ++P N +++ L K ++E +VF EM R GL + T+ +LL
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM-LRSGLSPDSTTYRSLLMEACKK 353
Query: 163 HKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKT 222
V E +F + DL F +++ R +++ A F+S +E L D
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS-VKEAGLIPDNVI 412
Query: 223 WNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMW 282
+ +++ G+C G A + +++ C D+ TY T + F M
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 283 NEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRR 342
PD +ID C + A+E+FQ MKE+ +V TYN+L+ K+
Sbjct: 473 ERA--LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 343 MEKVYELVEDMERKKGSCMPNAVTYSCLLNSL--KGP-EEVPGVLERMERNGCSLSDDIY 399
++ E+ DM K+ +P ++YS L+N+L KG E V + M + I
Sbjct: 531 IDTAKEIWADMVSKE--ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588
Query: 400 NLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
N +++ Y + N ++M G PD SY +I+G M A ++M
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 132/299 (44%), Gaps = 8/299 (2%)
Query: 179 GLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHE 238
G L++ F L+ C+ ++ DA+ +F + L + ++N ++NG+C +GN E
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR-SLQPTVVSFNTLINGYCKVGNLDE 293
Query: 239 AKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCI 298
R+ + S+ RPD+FTY+ I F M G P+ VI +
Sbjct: 294 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG--LIPNDVIFTTL 351
Query: 299 IDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKG 358
I + E +Q M +G +P++ YN+L+ CK + +V+ M R+
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR-- 409
Query: 359 SCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERNGCSLSDDIYNLVLRLYMKWDNQDGL 415
P+ +TY+ L++ +V LE M++NG L ++ ++ K
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 416 RKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+ EM R G PD +YT+M+ + G + + +EM S G V T ++++
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLN 528
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 157/362 (43%), Gaps = 11/362 (3%)
Query: 116 VCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTR 175
V N +++ K + +VFDE++ R +F+TL+ + ++E + +
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 176 EQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGN 235
E+ D+ + L+ LC+ ++ A LF + + D+ + +++G G
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV-IFTTLIHGHSRNGE 360
Query: 236 AHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVIC 295
K ++ +++ +PD+ Y T + GM G +PD +
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG--LRPDKITY 418
Query: 296 NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
+ID C V ALE+ ++M + G E + +++L+ +CK R+ + +M R
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 356 KKGSCMPNAVTYSCLLNSL--KGPEEVP-GVLERMERNGCSLSDDIYNLVLRLYMKWDNQ 412
P+ VTY+ ++++ KG + +L+ M+ +G S YN++L K
Sbjct: 479 --AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536
Query: 413 DGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLV 472
D M G PD +Y ++ GH+ + + RY ++ G+VA+ + K +
Sbjct: 537 KNADMLLDAMLNIGVVPDDITYNTLLEGHHRHA--NSSKRYIQK-PEIGIVADLASYKSI 593
Query: 473 IS 474
++
Sbjct: 594 VN 595
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 145/334 (43%), Gaps = 38/334 (11%)
Query: 95 KPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREG---LVNEDT 151
+ AL FF W + C ++ +L K + F+ L ++S RE +V +
Sbjct: 108 QKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTAS 167
Query: 152 FSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF-HSK 210
+ L++ V+EA++ FY +++ D+ A+ T++ LCR + + A L +
Sbjct: 168 ITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQ 227
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
F+ D T+ ++++ +C G M + CR I
Sbjct: 228 LPGFRYPPDTYTYTILISSYCRYG------------MQTGCRKA-------IRRRMWEAN 268
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
FRG PDVV NC+ID C R+ ALE+F+DMK +GC PN TY
Sbjct: 269 RMFREMLFRGFV-------PDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTY 321
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERM 387
NS I++ +E E++ M +K G +P + TY+ L+++L + E ++ M
Sbjct: 322 NSFIRYYSVTNEIEGAIEMMRTM-KKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEM 380
Query: 388 ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDE 421
G + Y LV + +GL T DE
Sbjct: 381 VEAGLVPREYTYKLVCDAL----SSEGLASTLDE 410
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 98/254 (38%), Gaps = 60/254 (23%)
Query: 278 FRGMWN---------EGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVA 328
F+G+W+ G N I C++ L + V EAL F MKE C+P+V
Sbjct: 143 FKGLWDFLRQVSRRENGKNVVTTASI-TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVY 201
Query: 329 TYNSLIKHLCKIRRMEKVYELVEDMERK-----------------------KGSC----- 360
YN++I LC++ +K L++ M+ + C
Sbjct: 202 AYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIR 261
Query: 361 ------------------MPNAVTYSCLLNSLKGPEEVPGVL---ERMERNGCSLSDDIY 399
+P+ VTY+CL++ + L E M+ GC + Y
Sbjct: 262 RRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTY 321
Query: 400 NLVLRLYMKWDNQDGLRKTWDEMERNGCG-PDRRSYTIMIHGHYENGKMKDAMRYFREMT 458
N +R Y + +G + M++ G G P +YT +IH E + +A EM
Sbjct: 322 NSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMV 381
Query: 459 SKGMVAEPRTEKLV 472
G+V T KLV
Sbjct: 382 EAGLVPREYTYKLV 395
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 150/359 (41%), Gaps = 8/359 (2%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
NEIL L + + ++ + M+ + + + S L+R A ++++A+ +
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G D + ++ LC+ H+ A L + D+ T+N ++ GNA
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGS-PPDVITYNTVIRCMFDYGNAE 226
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
+A R WKD + + C P + TY + M EGC PD+V N
Sbjct: 227 QAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGC--YPDIVTYNS 284
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
+++ C + + E V Q + G E N TYN+L+ LC ++V E++ M +
Sbjct: 285 LVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQT- 343
Query: 358 GSCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
S P +TY+ L+N L + ++ +M C YN VL K D
Sbjct: 344 -SYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
+ ++ C P +Y +I G + G MK A+ + +M G+ + T + +I
Sbjct: 403 AIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLI 461
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 141/379 (37%), Gaps = 43/379 (11%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
P + N I+ L K + ++MS + T++T++R E+AI
Sbjct: 171 VPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIR 230
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ + Q G + + L+ +CRY A + A E + DI T+N ++N
Sbjct: 231 FWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVE-GCYPDIVTYNSLVNYN 289
Query: 231 CVLGNAHEAKRVWKDIMA---------------SKCR--------------------PDL 255
C GN E V + I++ S C P +
Sbjct: 290 CRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTV 349
Query: 256 FTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVF 315
TY I F M + C PD+V N ++ A+ + V +A+E+
Sbjct: 350 ITYNILINGLCKARLLSRAIDFFYQMLEQ--KCLPDIVTYNTVLGAMSKEGMVDDAIELL 407
Query: 316 QDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL- 374
+K C P + TYNS+I L K M+K EL M P+ +T L+
Sbjct: 408 GLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQM--LDAGIFPDDITRRSLIYGFC 465
Query: 375 --KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRR 432
EE VL+ G + Y LV++ K + + + M GC PD
Sbjct: 466 RANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDET 525
Query: 433 SYTIMIHGHYENGKMKDAM 451
YT ++ G E G +A+
Sbjct: 526 IYTAIVKGVEEMGMGSEAV 544
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 129/312 (41%), Gaps = 15/312 (4%)
Query: 176 EQFGL-------DLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+QFGL + D + +L LC + DA L AR Q+ N++
Sbjct: 89 KQFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLV-R 147
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
G + +A + + ++ S PD TY I M G
Sbjct: 148 GLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGS-- 205
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
PDV+ N +I + +A+ ++D + GC P + TY L++ +C+ + E
Sbjct: 206 PPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIE 265
Query: 349 LVEDMERKKGSCMPNAVTYSCLLN---SLKGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
++EDM + C P+ VTY+ L+N EEV V++ + +G L+ YN +L
Sbjct: 266 VLEDMAVE--GCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHS 323
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
+ D + + + M + P +Y I+I+G + + A+ +F +M + + +
Sbjct: 324 LCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPD 383
Query: 466 PRTEKLVISMNS 477
T V+ S
Sbjct: 384 IVTYNTVLGAMS 395
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 156/344 (45%), Gaps = 15/344 (4%)
Query: 123 ILGKMSRFEELHQVFDEMSHRE--GLVNEDT--FSTLLRRFAAAHKVEEAISMFYTREQF 178
++ ++R + H + +S E GL DT F+ ++ + + +++A+ +F ++
Sbjct: 360 LVTALTRQKHFHSLLSLISKVEKNGL-KPDTILFNAIINASSESGNLDQAMKIFEKMKES 418
Query: 179 GLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHE 238
G F TL+ + +E++ L R+ L + +T N+++ WC E
Sbjct: 419 GCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEE 478
Query: 239 AKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXF--RGMWNEGCNCKPDVVICN 296
A + + + +PD+ T+ T R + N+ KP+V C
Sbjct: 479 AWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK---VKPNVRTCG 535
Query: 297 CIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
I++ C + ++ EAL F MKE G PN+ +NSLIK I M+ V E+V+ ME
Sbjct: 536 TIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLME-- 593
Query: 357 KGSCMPNAVTYSCLLN---SLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQD 413
+ P+ VT+S L+N S+ + + M G ++++ + Y + +
Sbjct: 594 EFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPE 653
Query: 414 GLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
+ ++M + G P+ YT +I G G+MK AM+ +++M
Sbjct: 654 KAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 117/248 (47%), Gaps = 7/248 (2%)
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXF 278
D+++ ++NG G EA ++ ++ +P L TY T +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 279 RGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLC 338
+ G KPD ++ N II+A + +A+++F+ MKE GC+P +T+N+LIK
Sbjct: 378 SKVEKNGL--KPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYG 435
Query: 339 KIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS---LKGPEEVPGVLERMERNGCSLS 395
KI ++E+ L++ M R + PN T + L+ + + EE ++ +M+ G
Sbjct: 436 KIGKLEESSRLLDMMLRDE-MLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
Query: 396 DDIYNLVLRLYMKWDNQ-DGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYF 454
+N + + Y + + M N P+ R+ +++G+ E GKM++A+R+F
Sbjct: 495 VVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
Query: 455 REMTSKGM 462
M G+
Sbjct: 555 YRMKELGV 562
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 134/301 (44%), Gaps = 8/301 (2%)
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
+EA S+F T + G L + TL+ L R KH +L SK + L D +N
Sbjct: 336 QEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI-SKVEKNGLKPDTILFNA 394
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
I+N GN +A ++++ + S C+P T+ T I M +
Sbjct: 395 IINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDE 454
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
+P+ CN ++ A C ++++ EA + M+ G +P+V T+N+L K +I
Sbjct: 455 M-LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCT 513
Query: 346 VYE-LVEDMERKKGSCMPNAVTYSCLLNSL--KGP-EEVPGVLERMERNGCSLSDDIYNL 401
+ ++ M K PN T ++N +G EE RM+ G + ++N
Sbjct: 514 AEDMIIPRMLHNK--VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNS 571
Query: 402 VLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
+++ ++ ++ DG+ + D ME G PD +++ +++ G MK + +M G
Sbjct: 572 LIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGG 631
Query: 462 M 462
+
Sbjct: 632 I 632
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 144/336 (42%), Gaps = 13/336 (3%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV-NEDTFSTLLRRFAAAHKVEEAIS 170
PT+ N ++ GK+ + EE ++ D M E L N+ T + L++ + K+EEA +
Sbjct: 422 PTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWN 481
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ Y + +G+ D+ F TL R AE + + ++ +++T I+NG+
Sbjct: 482 IVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGY 541
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C G EA R + + P+LF + + I M E KP
Sbjct: 542 CEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLM--EEFGVKP 599
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
DVV + +++A + E++ DM E G +P++ ++ L K + EK +++
Sbjct: 600 DVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQIL 659
Query: 351 EDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWD 410
M +K PN V Y+ +++ E+ ++ + + C + NL + W
Sbjct: 660 NQM--RKFGVRPNVVIYTQIISGWCSAGEMKKAMQ-VYKKMCGIVGLSPNLTTYETLIWG 716
Query: 411 NQDGLRKTW------DEMERNGCGPDRRSYTIMIHG 440
+ ++ W +ME P R++ ++ G
Sbjct: 717 FGEA-KQPWKAEELLKDMEGKNVVPTRKTMQLIADG 751
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 113/263 (42%), Gaps = 19/263 (7%)
Query: 95 KPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFST 154
KP +V FN +KA YA C E++ + M H + N T T
Sbjct: 492 KPDVVTFNTLAKA--YARIGSTCTA-----------EDM--IIPRMLHNKVKPNVRTCGT 536
Query: 155 LLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREF 214
++ + K+EEA+ FY ++ G+ +L F +L+ ++ + EF
Sbjct: 537 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV-DLMEEF 595
Query: 215 QLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXX 274
+ D+ T++ ++N W +G+ + ++ D++ PD+ ++
Sbjct: 596 GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKA 655
Query: 275 XXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDM-KERGCEPNVATYNSL 333
M G +P+VVI II C + +A++V++ M G PN+ TY +L
Sbjct: 656 EQILNQMRKFGV--RPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETL 713
Query: 334 IKHLCKIRRMEKVYELVEDMERK 356
I + ++ K EL++DME K
Sbjct: 714 IWGFGEAKQPWKAEELLKDMEGK 736
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 158/369 (42%), Gaps = 8/369 (2%)
Query: 92 SDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDT 151
+DW+ +L +W + Y P+ N +L + + +F+ H +FDEM R + T
Sbjct: 133 NDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYT 192
Query: 152 FSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKA 211
+STL+ F + A+S EQ + DL + L+ R A ++F S+
Sbjct: 193 YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIF-SRL 251
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
+ + D+ +N ++N + EA+ + K++ + P+ +Y+T +
Sbjct: 252 KRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKF 311
Query: 272 XXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYN 331
F M + NC D+ CN +ID V EA +F +++ EPNV +YN
Sbjct: 312 LEALSVFAEM--KEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYN 369
Query: 332 SLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLERME 388
++++ + + L M+RK N VTY+ ++ E+ +++ M+
Sbjct: 370 TILRVYGEAELFGEAIHLFRLMQRK--DIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQ 427
Query: 389 RNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMK 448
G + Y+ ++ ++ K D + ++ +G D+ Y MI + G M
Sbjct: 428 SRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMG 487
Query: 449 DAMRYFREM 457
A R E+
Sbjct: 488 HAKRLLHEL 496
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 135/327 (41%), Gaps = 10/327 (3%)
Query: 103 WASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAA 162
W+ + P N IL + G+ F E +F M ++ N T++T+++ +
Sbjct: 354 WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT 413
Query: 163 HKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKT 222
+ E+A ++ + G++ + + T++ + ++ A TLF K R + D
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQ-KLRSSGVEIDQVL 472
Query: 223 WNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMW 282
+ ++ + +G AKR+ ++ PD T I FR +
Sbjct: 473 YQTMIVAYERVGLMGHAKRLLHELKL----PDNIPRETAITILAKAGRTEEATWVFRQAF 528
Query: 283 NEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRR 342
G D+ + C+I+ +R +EVF+ M+ G P+ ++ K R
Sbjct: 529 ESGE--VKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQRE 586
Query: 343 MEKVYELVEDMERKKGSCMPNAVTYS--CLLNSLKGPEEVPGVLERMERNGCSLSDDIYN 400
EK + +M+ ++G P+ V + L +S K E V + +R+E + S +++
Sbjct: 587 FEKADTVYREMQ-EEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHL 645
Query: 401 LVLRLYMKWDNQDGLRKTWDEMERNGC 427
+V LY + D + + + M G
Sbjct: 646 VVAALYERADKLNDASRVMNRMRERGI 672
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 161/363 (44%), Gaps = 8/363 (2%)
Query: 103 WASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAA 162
W S+ +P S+ C IL+ L + RF+ + + M R + + + L +
Sbjct: 153 WVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQ 212
Query: 163 HKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKT 222
+ + G+ ++ + ++ LCR +E+AE +F + L ++ T
Sbjct: 213 GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVL-PNLYT 271
Query: 223 WNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMW 282
++ +++G+C GN +A ++K+I+ ++ P++ + T + F M
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Query: 283 NEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRR 342
G + P++ + NC+I C + EA+ + +M+ P+V TY LI LC +
Sbjct: 332 KFGVD--PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 343 MEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIY 399
+ + L + M+ ++ P++ TY+ L++ E+ + M +G + +
Sbjct: 390 VAEANRLFQKMKNER--IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITF 447
Query: 400 NLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
+ ++ Y + + EM G PD +YT +I H++ MK+A+R + +M
Sbjct: 448 STLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLE 507
Query: 460 KGM 462
G+
Sbjct: 508 AGI 510
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 161/372 (43%), Gaps = 12/372 (3%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
K P + ++D K + + ++ E+ E L N F TL+ F A ++
Sbjct: 261 KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
A S+F +FG+D +L + L+ C+ ++ +A L S+ L D+ T+ +
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL-SEMESLNLSPDVFTYTI 379
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
++NG C+ EA R+++ + + P TY + I M G
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
+P+++ + +ID C + + A+ ++ +M +G P+V TY +LI K M++
Sbjct: 440 V--EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKE 497
Query: 346 VYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLV-LR 404
L DM + PN T++CL++ + ++ + N S +N V
Sbjct: 498 ALRLYSDM--LEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS--CWNHVGFT 553
Query: 405 LYMKWDNQDG--LRKT--WDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
++ Q+G LR + + +M G PD SY M+ GH + ++ D M +M
Sbjct: 554 CLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKT 613
Query: 461 GMVAEPRTEKLV 472
G++ +L+
Sbjct: 614 GILPNLLVNQLL 625
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 154/349 (44%), Gaps = 9/349 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
ILD L + ++ EE ++F+ M L N T+S ++ + V +A ++
Sbjct: 241 ILD-LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAE 299
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
L ++ F TL+ C+ + + A +LF + F + ++ +N +++G C GN EA
Sbjct: 300 LLPNVVVFGTLVDGFCKARELVTARSLFVHMVK-FGVDPNLYVYNCLIHGHCKSGNMLEA 358
Query: 240 KRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCII 299
+ ++ + PD+FTY I F+ M NE P N +I
Sbjct: 359 VGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE--RIFPSSATYNSLI 416
Query: 300 DALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGS 359
C + + +AL++ +M G EPN+ T+++LI C +R ++ L +M K
Sbjct: 417 HGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK--G 474
Query: 360 CMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLR 416
+P+ VTY+ L+++ +E + M G +D + ++ + K
Sbjct: 475 IVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAI 534
Query: 417 KTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
+ E + + +T +I G +NG + A R+F +M S G+ +
Sbjct: 535 DFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPD 583
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 103/267 (38%), Gaps = 42/267 (15%)
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD--IMASK-CRPDLFTYATFIXXXXX 267
+RE + D K ILNG L VW D +M S+ PD+ Y
Sbjct: 155 SREMKCSPDSKACLSILNG---LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFK 211
Query: 268 XXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
M + G KP+V I I LC ++ EA ++F+ MK+ G PN+
Sbjct: 212 QGLYSKKEKLLDEMTSLGI--KPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNL 269
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERM 387
TY+++I CK + + Y L +++ +PN V + L++ E+
Sbjct: 270 YTYSAMIDGYCKTGNVRQAYGLYKEI--LVAELLPNVVVFGTLVDGFCKARELVTA---- 323
Query: 388 ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKM 447
R + M + G P+ Y +IHGH ++G M
Sbjct: 324 ----------------------------RSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNM 355
Query: 448 KDAMRYFREMTSKGMVAEPRTEKLVIS 474
+A+ EM S + + T ++I+
Sbjct: 356 LEAVGLLSEMESLNLSPDVFTYTILIN 382
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 169/377 (44%), Gaps = 12/377 (3%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNE- 149
+ W+ AL F W + ++P +R+ IL +LG+ ++ ++F + E V +
Sbjct: 168 QESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIF---TRAEPTVGDR 224
Query: 150 -DTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVE-DAETLF 207
++ ++ ++ + K +A + Q G DL +F TL+ + + +
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 208 HSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXX 267
R L D T+N +L+ N A +V++D+ A +C+PDL+TY I
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 268 XXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
F + +G PD V N ++ A ++ + EV+Q M++ G +
Sbjct: 345 CGLAAEAERLFMELELKGFF--PDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDE 402
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE---EVPGVL 384
TYN++I K +++ +L +DM+ G P+A+TY+ L++SL E ++
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN-PDAITYTVLIDSLGKANRTVEAAALM 461
Query: 385 ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYEN 444
M G + Y+ ++ Y K ++ T+ M R+G PD +Y++M+
Sbjct: 462 SEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRG 521
Query: 445 GKMKDAMRYFREMTSKG 461
+ + A +R+M S G
Sbjct: 522 NETRKAWGLYRDMISDG 538
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 147/336 (43%), Gaps = 8/336 (2%)
Query: 108 DSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEE 167
D +PT N +L L R EEL+ V +E+ +++ + +L FA A + E
Sbjct: 816 DGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFE 875
Query: 168 AISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVIL 227
++ + + G + +R ++ LC+ K V DAE + S+ E ++ WN +L
Sbjct: 876 VKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMV-SEMEEANFKVELAIWNSML 934
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCN 287
+ + + + +V++ I + PD TY T I + M N G +
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 288 CKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVY 347
K D +I A +K + +A ++F+++ +G + + + Y++++K K
Sbjct: 995 PKLDTY--KSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAE 1052
Query: 348 ELVEDMERKKGSCMPNAVTYSCLL---NSLKGPEEVPGVLERMERNGCSLSDDIYNLVLR 404
+L++ M K P T L+ +S P+E VL ++ L+ Y+ V+
Sbjct: 1053 KLLQMM--KNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVID 1110
Query: 405 LYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHG 440
Y++ + + + EM++ G PD R +T +
Sbjct: 1111 AYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRA 1146
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 114/258 (44%), Gaps = 6/258 (2%)
Query: 220 IKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFR 279
++ +N ++ + G +A+ + + C PDL ++ T I
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 280 GMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCK 339
+PD + N ++ A + A++VF+DM+ C+P++ TYN++I +
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 340 IRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSD 396
+ L ++E K P+AVTY+ LL + + E+V V ++M++ G +
Sbjct: 345 CGLAAEAERLFMELELK--GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDE 402
Query: 397 DIYNLVLRLYMKWDNQDGLRKTWDEMER-NGCGPDRRSYTIMIHGHYENGKMKDAMRYFR 455
YN ++ +Y K D + + +M+ +G PD +YT++I + + +A
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 456 EMTSKGMVAEPRTEKLVI 473
EM G+ +T +I
Sbjct: 463 EMLDVGIKPTLQTYSALI 480
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 146/347 (42%), Gaps = 8/347 (2%)
Query: 114 SRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFY 173
S + +I++ GK +++ V + + T+++L+ +A E A ++F
Sbjct: 752 SPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFN 811
Query: 174 TREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVL 233
T + G +++ LL LC +E+ + + ++ + ++L+ +
Sbjct: 812 TMMRDGPSPTVESINILLHALCVDGRLEELYVVVE-ELQDMGFKISKSSILLMLDAFARA 870
Query: 234 GNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVV 293
GN E K+++ + A+ P + Y I M E N K ++
Sbjct: 871 GNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEM--EEANFKVELA 928
Query: 294 ICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDM 353
I N ++ + + ++V+Q +KE G EP+ TYN+LI C+ RR E+ Y L++ M
Sbjct: 929 IWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM 988
Query: 354 ERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWD 410
R G P TY L+++ K E+ + E + G L Y+ ++++
Sbjct: 989 -RNLG-LDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSG 1046
Query: 411 NQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
+ K M+ G P + +++ + +G ++A + +
Sbjct: 1047 SDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNL 1093
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
P+ + I+ L + A+E+F E V YN+++ + + K EL
Sbjct: 189 PNARMVAAILGVLGRWNQESLAVEIFTR-AEPTVGDRVQVYNAMMGVYSRSGKFSKAQEL 247
Query: 350 VEDMERKKGSCMPNAVTYSCLLNS-LKGPEEVPGV---LERMERNGCSLSDDI-YNLVLR 404
V+ M R++G C+P+ ++++ L+N+ LK P + L M RN D I YN +L
Sbjct: 248 VDAM-RQRG-CVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLS 305
Query: 405 LYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVA 464
+ N DG K +++ME + C PD +Y MI + G +A R F E+ KG
Sbjct: 306 ACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFP 365
Query: 465 EPRT 468
+ T
Sbjct: 366 DAVT 369
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 96/237 (40%), Gaps = 2/237 (0%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N ++ + G+ E ++F E+ + + T+++LL FA E+ ++ ++
Sbjct: 336 NAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQK 395
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G D + T++ + ++ A L+ + D T+ V+++
Sbjct: 396 MGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTV 455
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
EA + +++ +P L TY+ I F M G KPD + +
Sbjct: 456 EAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGT--KPDNLAYSV 513
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDME 354
++D L +A +++DM G P+ Y +I L K R + + + + DME
Sbjct: 514 MLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDME 570
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 3/228 (1%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N +LD + K + + ++ +M + + N ++ST++ FA A + +EA+++F
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G+ LD ++ TLL + E+A + A + +D+ T+N +L G+ G
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMA-SVGIKKDVVTYNALLGGYGKQGKYD 496
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
E K+V+ ++ P+L TY+T I FR + G + DVV+ +
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL--RADVVLYSA 554
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
+IDALC V A+ + +M + G PNV TYNS+I + M++
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDR 602
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 157/356 (44%), Gaps = 13/356 (3%)
Query: 117 CNEILDILGKMSRFEELHQVFDEMSHREGLVNEDT--FSTLLRRFAAAHKVEEAISMFYT 174
C I+ LG + ++ ++ RE NE S ++ KV A +F T
Sbjct: 199 CTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFET 258
Query: 175 REQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLG 234
G + AF L+ R E+A ++F+S +E+ L ++ T+N +++ C G
Sbjct: 259 AFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS-MKEYGLRPNLVTYNAVIDA-CGKG 316
Query: 235 NAH--EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDV 292
+ + + ++ + +PD T+ + + F M N + DV
Sbjct: 317 GMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR--RIEQDV 374
Query: 293 VICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVED 352
N ++DA+C ++ A E+ M + PNV +Y+++I K R ++ L +
Sbjct: 375 FSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE 434
Query: 353 MERKKGSCMPNAVTYSCLLN---SLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKW 409
M R G + + V+Y+ LL+ + EE +L M G YN +L Y K
Sbjct: 435 M-RYLGIAL-DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492
Query: 410 DNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
D ++K + EM+R P+ +Y+ +I G+ + G K+AM FRE S G+ A+
Sbjct: 493 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRAD 548
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 157/383 (40%), Gaps = 43/383 (11%)
Query: 129 RFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFR 188
+F + +F +M+ L + FS LL A +K E IS+F E G+ DL +F
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKR------- 241
TL+ CR + A + K + I T+ ++NG+C + +EA
Sbjct: 119 TLIDCFCRCARLSLALSCL-GKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG 177
Query: 242 --------VWKDIMASKC--------------------RPDLFTYATFIXXXXXXXXXXX 273
++ I+ S C RPD+ TY + I
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV 237
Query: 274 XXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSL 333
M G + PDV+ + +ID + ++ EA + + +M +R PN+ TYNSL
Sbjct: 238 SARILSDMMRMGIS--PDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 334 IKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERN 390
I LC +++ +++ + K PNAVTY+ L+N K ++ +L M R+
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSK--GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD 353
Query: 391 GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDA 450
G YN + + Y + K M G PD ++ I++ G ++GK+ A
Sbjct: 354 GVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKA 413
Query: 451 MRYFREMTSKGMVAEPRTEKLVI 473
+ ++ V T ++I
Sbjct: 414 LVRLEDLQKSKTVVGIITYNIII 436
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 139/344 (40%), Gaps = 41/344 (11%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDA-ETLFHS 209
TF +L+ F ++ EA+S+ G + ++ + T++ LC V A + L H
Sbjct: 151 TFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHM 210
Query: 210 KAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXX 269
K + + D+ T+N ++ G + R+ D+M PD+ T++ I
Sbjct: 211 K--KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEG 268
Query: 270 XXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVAT 329
+ M N P++V N +I+ LC + EA +V + +G PN T
Sbjct: 269 QLLEAKKQYNEMIQRSVN--PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVT 326
Query: 330 YNSLIKHLCKIRRMEKVYELVEDMERK-------------KGSCM--------------- 361
YN+LI CK +R++ +++ M R +G C
Sbjct: 327 YNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMV 386
Query: 362 -----PNAVTYSCLLNSLKGPEEVPGVLERME---RNGCSLSDDIYNLVLRLYMKWDNQD 413
P+ T++ LL+ L ++ L R+E ++ + YN++++ K D +
Sbjct: 387 SCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVE 446
Query: 414 GLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
+ + G PD +Y M+ G ++A +R+M
Sbjct: 447 DAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 108/252 (42%), Gaps = 4/252 (1%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
+P + ++D+ GK + E + ++EM R N T+++L+ ++EA
Sbjct: 251 SPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKK 310
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ G + + TL+ C+ K V+D + +R+ + D T+N + G+
Sbjct: 311 VLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD-GVDGDTFTYNTLYQGY 369
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C G A++V +++ PD++T+ + +
Sbjct: 370 CQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKS--KTVV 427
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
++ N II LC +V +A +F + +G P+V TY +++ L + R + +EL
Sbjct: 428 GIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELY 487
Query: 351 EDMERKKGSCMP 362
M+++ G MP
Sbjct: 488 RKMQKEDG-LMP 498
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 5/189 (2%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
+P +V +++ C R EA+ + + G EPNV YN++I LC+ ++ +
Sbjct: 146 EPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALD 205
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSL--KGPEEVPG-VLERMERNGCSLSDDIYNLVLRL 405
+++ M KK P+ VTY+ L+ L G V +L M R G S ++ ++ +
Sbjct: 206 VLKHM--KKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDV 263
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
Y K +K ++EM + P+ +Y +I+G +G + +A + + SKG
Sbjct: 264 YGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPN 323
Query: 466 PRTEKLVIS 474
T +I+
Sbjct: 324 AVTYNTLIN 332
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 179/410 (43%), Gaps = 56/410 (13%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
Y ++ C ++ L K +R ++ V+ EM R+ N TF+ ++ K+ +A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYK---HVEDAETLFHSKAREFQLHRDIKTWNV 225
+ + +G ++ ++ TL+ C+ + A+ + E + ++ T+N+
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV-ENDVSPNLTTFNI 301
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
+++G+ N + +V+K+++ +P++ +Y + I M + G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
+P+++ N +I+ C + EAL++F +K +G P YN LI CK+ +++
Sbjct: 362 V--QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDD 419
Query: 346 VYELVEDMERKKGSCMPNAVTYSCLLNSL------------------KG-PEEV------ 380
+ L E+MER+ +P+ TY+CL+ L KG P+ V
Sbjct: 420 GFALKEEMERE--GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILM 477
Query: 381 ------------PGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCG 428
+L+ M + G YN+V++ Y K N +ME+
Sbjct: 478 EGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK---- 533
Query: 429 PDRR------SYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLV 472
+RR SY +++ G+ + GK++DA EM KG+V T ++V
Sbjct: 534 -ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 160/384 (41%), Gaps = 48/384 (12%)
Query: 132 ELHQVFDEMSHREGL-VNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTL 190
++H +F +S + + VN L+ +A + E F +G L + + L
Sbjct: 135 QVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPL 194
Query: 191 LMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASK 250
++ L + D E ++ R ++ ++ T+NV++N C G ++A+ V +D+
Sbjct: 195 MIALLKENRSADVEYVYKEMIRR-KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 251 CRPDLFTYATFIX---XXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKR 307
C P++ +Y T I + M + P++ N +ID
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEN--DVSPNLTTFNILIDGFWKDDN 311
Query: 308 VPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTY 367
+P +++VF++M ++ +PNV +YNSLI LC ++ + + + M PN +TY
Sbjct: 312 LPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV--SAGVQPNLITY 369
Query: 368 SCLLN----------------SLKGPEEVP----------------------GVLERMER 389
+ L+N S+KG VP + E MER
Sbjct: 370 NALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
Query: 390 NGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKD 449
G YN ++ + N + +K +D++ G PD ++ I++ G+ G+ +
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRK 488
Query: 450 AMRYFREMTSKGMVAEPRTEKLVI 473
A +EM+ G+ T +V+
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIVM 512
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 39/225 (17%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVY- 347
+P+V N +I+ALC ++ +A +V +DMK GC PNV +YN+LI CK+ K+Y
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK 279
Query: 348 ------ELVED-----------------------------MERKKGSCMPNAVTYSCLLN 372
E+VE+ E PN ++Y+ L+N
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN 339
Query: 373 SLKGPEEVPGVL---ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGP 429
L ++ + ++M G + YN ++ + K D + ++ G P
Sbjct: 340 GLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 399
Query: 430 DRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
R Y ++I + + GK+ D EM +G+V + T +I+
Sbjct: 400 TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 167/379 (44%), Gaps = 9/379 (2%)
Query: 93 DWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTF 152
D K A+ ++ + S P + N ++ L K R ++ ++++ M E + T+
Sbjct: 234 DHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTY 293
Query: 153 STLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAR 212
S+L+ A V++A S+F ++ +D+ + T+L CR ++++ L+ +
Sbjct: 294 SSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW--RIM 351
Query: 213 EFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXX 272
E + +I ++N+++ G G EA +W+ + A D TY FI
Sbjct: 352 EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVN 411
Query: 273 XXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNS 332
+ + + G + DV IID LC KKR+ EA + ++M + G E N N+
Sbjct: 412 KALGVMQEVESSGGHL--DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNA 469
Query: 333 LIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL-KGPE--EVPGVLERMER 389
LI L + R+ + + +M K C P V+Y+ L+ L K + E ++ M
Sbjct: 470 LIGGLIRDSRLGEASFFLREM--GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 390 NGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKD 449
NG Y+++L + D + W + ++G D + I+IHG GK+ D
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 450 AMRYFREMTSKGMVAEPRT 468
AM M + A T
Sbjct: 588 AMTVMANMEHRNCTANLVT 606
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 172/387 (44%), Gaps = 17/387 (4%)
Query: 95 KPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFST 154
+ A F+ A++ YA ++ V + IL L + + ++ + + +E +ED +
Sbjct: 24 RAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALS 83
Query: 155 LLRRFAAAHKVEEAISMFY-TREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
+++ + ++A+ +F RE FG + + ++ TLL K E+LF +
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLF-AYFET 142
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXX 273
+ +++T+NV++ C +A+ + +PD+F+Y+T I
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD 202
Query: 274 XXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKE-RGCEPNVATYNS 332
F M G PDV N +ID +K A+E++ + E PNV T+N
Sbjct: 203 ALELFDEMSERG--VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNI 260
Query: 333 LIKHLCKIRRME---KVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLER 386
+I L K R++ K++E ++ ER+K + TYS L++ L ++ V
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREK-----DLYTYSSLIHGLCDAGNVDKAESVFNE 315
Query: 387 MERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGK 446
++ S+ YN +L + + + W ME + SY I+I G ENGK
Sbjct: 316 LDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGK 374
Query: 447 MKDAMRYFREMTSKGMVAEPRTEKLVI 473
+ +A +R M +KG A+ T + I
Sbjct: 375 IDEATMIWRLMPAKGYAADKTTYGIFI 401
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 167/399 (41%), Gaps = 39/399 (9%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED-TFSTLLRRFAAAHKVEEAI 169
AP + N ++ + K FE+ D M +EG + ++ST++ A A K+++A+
Sbjct: 146 APNLQTYNVLIKMSCKKKEFEKARGFLDWM-WKEGFKPDVFSYSTVINDLAKAGKLDDAL 204
Query: 170 SMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
+F + G+ D+ + L+ + K + A L+ + ++ ++KT N++++G
Sbjct: 205 ELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISG 264
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXF----------- 278
G + ++W+ + ++ DL+TY++ I F
Sbjct: 265 LSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASID 324
Query: 279 ----RGMWNEGCNC-----------------KPDVVICNCIIDALCFKKRVPEALEVFQD 317
M C C ++V N +I L ++ EA +++
Sbjct: 325 VVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRL 384
Query: 318 MKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL--- 374
M +G + TY I LC + K +++++E G + Y+ +++ L
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL--DVYAYASIIDCLCKK 442
Query: 375 KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSY 434
K EE +++ M ++G L+ + N ++ ++ EM +NGC P SY
Sbjct: 443 KRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSY 502
Query: 435 TIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
I+I G + GK +A + +EM G + +T +++
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 139/316 (43%), Gaps = 12/316 (3%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
+++TLL F A + + S+F E G+ +L + L+ C+ K E A
Sbjct: 116 SYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWM 175
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
+E D+ +++ ++N G +A ++ ++ PD+ Y I
Sbjct: 176 WKE-GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234
Query: 271 XXXXXXXFRGMWN---EGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
+W+ E + P+V N +I L RV + L++++ MK+ E ++
Sbjct: 235 HKTAME----LWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDL 290
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLE-- 385
TY+SLI LC ++K + +++ +K S + VTY+ +L ++ LE
Sbjct: 291 YTYSSLIHGLCDAGNVDKAESVFNELDERKASI--DVVTYNTMLGGFCRCGKIKESLELW 348
Query: 386 RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENG 445
R+ + S++ YN++++ ++ D W M G D+ +Y I IHG NG
Sbjct: 349 RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNG 408
Query: 446 KMKDAMRYFREMTSKG 461
+ A+ +E+ S G
Sbjct: 409 YVNKALGVMQEVESSG 424
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 161/380 (42%), Gaps = 42/380 (11%)
Query: 131 EELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTL 190
++ VF+E+ R+ ++ T++T+L F K++E++ ++ E +++ ++ L
Sbjct: 307 DKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNIL 365
Query: 191 LMWLCRYKHVEDAETLFH-SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMAS 249
+ L +++A ++ A+ + D T+ + ++G CV G ++A V +++ +S
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYA--ADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 250 KCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG-------CN--------------- 287
D++ YA+ I + M G CN
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 288 -----------CKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKH 336
C+P VV N +I LC + EA ++M E G +P++ TY+ L+
Sbjct: 484 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG 543
Query: 337 LCKIRRMEKVYELVEDMER---KKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCS 393
LC+ R+++ EL + + M N + + L S+ ++ V+ ME C+
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG--LCSVGKLDDAMTVMANMEHRNCT 601
Query: 394 LSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRY 453
+ YN ++ + K + + W M + G PD SY ++ G + AM +
Sbjct: 602 ANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEF 661
Query: 454 FREMTSKGMVAEPRTEKLVI 473
F + + G+ T +++
Sbjct: 662 FDDARNHGIFPTVYTWNILV 681
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 3/222 (1%)
Query: 114 SRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFY 173
S VCN ++ L + SR E EM +++ L+ A K EA +
Sbjct: 464 SHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVK 523
Query: 174 TREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVL 233
+ G DL + LL LCR + ++ A L+H + + L D+ N++++G C +
Sbjct: 524 EMLENGWKPDLKTYSILLCGLCRDRKIDLALELWH-QFLQSGLETDVMMHNILIHGLCSV 582
Query: 234 GNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVV 293
G +A V ++ C +L TY T + + M+ G +PD++
Sbjct: 583 GKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGL--QPDII 640
Query: 294 ICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIK 335
N I+ LC + V A+E F D + G P V T+N L++
Sbjct: 641 SYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVR 682
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 9/197 (4%)
Query: 283 NEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKER-GCEPNVATYNSLIKHLCKIR 341
++ C C DV + +I +AL+VF+ M+E GCEP + +YN+L+ + +
Sbjct: 71 SQECKCDEDVALS--VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAK 128
Query: 342 RMEKVYELVEDMERKKGSCMPNAVTYSCLLN---SLKGPEEVPGVLERMERNGCSLSDDI 398
+ KV L E PN TY+ L+ K E+ G L+ M + G
Sbjct: 129 QWVKVESLFAYFE--TAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFS 186
Query: 399 YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYF-REM 457
Y+ V+ K D + +DEM G PD Y I+I G + K AM + R +
Sbjct: 187 YSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246
Query: 458 TSKGMVAEPRTEKLVIS 474
+ +T ++IS
Sbjct: 247 EDSSVYPNVKTHNIMIS 263
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 159/359 (44%), Gaps = 9/359 (2%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N +D GK+ + + + F E+ +E T+++++ A++++EA+ MF E+
Sbjct: 242 NVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
A+ T++M ++A +L + + + I +N IL +G
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVI-AYNCILTCLRKMGKVD 360
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
EA +V+++ M P+L TY I M G P+V N
Sbjct: 361 EALKVFEE-MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF--PNVRTVNI 417
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
++D LC +++ EA +F++M + C P+ T+ SLI L K+ R++ Y++ E M
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM--LD 475
Query: 358 GSCMPNAVTYSCLLNSLKG---PEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
C N++ Y+ L+ + E+ + + M CS + N + K +
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEK 535
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
R ++E++ PD RSY+I+IHG + G + F M +G V + R +VI
Sbjct: 536 GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 152/381 (39%), Gaps = 50/381 (13%)
Query: 100 FFNWASKADSY-----------APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
FFN K D + +P ++ N +D + K E+ +F+E+ R + +
Sbjct: 492 FFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPD 551
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
++S L+ A E +FY+ ++ G LD A+ ++ C+ V A L
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611
Query: 209 S-KAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXX 267
K + F+ + T+ +++G + EA ++++ + + ++ Y++ I
Sbjct: 612 EMKTKGFE--PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK 669
Query: 268 XXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
+ +G P++ N ++DAL + + EAL FQ MKE C PN
Sbjct: 670 VGRIDEAYLILEELMQKGLT--PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERM 387
TY LI LCK+R+ K + ++M+++ P+ ++Y+ +++ L
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQ--GMKPSTISYTTMISGLA------------ 773
Query: 388 ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKM 447
K N +D + NG PD Y MI G +
Sbjct: 774 --------------------KAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813
Query: 448 KDAMRYFREMTSKGMVAEPRT 468
DA F E +G+ +T
Sbjct: 814 MDAFSLFEETRRRGLPIHNKT 834
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/443 (20%), Positives = 180/443 (40%), Gaps = 75/443 (16%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMS------- 141
R D A+ +F W + N +L ++ + F+ L Q+ EMS
Sbjct: 73 RRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPS 132
Query: 142 ----------------HREG--LVNE----------DTFSTLLRRFAAAHKVEEAISMFY 173
REG +V ++TL+ F+A + + +++F
Sbjct: 133 VNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQ 192
Query: 174 TREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVL 233
++ G + + F TL+ + V+ A +L + + L DI +NV ++ + +
Sbjct: 193 QMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLL-DEMKSSSLDADIVLYNVCIDSFGKV 251
Query: 234 GNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFR-------------- 279
G A + + +I A+ +PD TY + I F
Sbjct: 252 GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAY 311
Query: 280 ----------GMWNEGCN---------CKPDVVICNCIIDALCFKKRVPEALEVFQDMKE 320
G ++E + P V+ NCI+ L +V EAL+VF++MK
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK- 370
Query: 321 RGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGP 377
+ PN++TYN LI LC+ +++ +EL + M+ K PN T + +++ L +
Sbjct: 371 KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ--KAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 378 EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIM 437
+E + E M+ C+ + + ++ K D K +++M + C + YT +
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 438 IHGHYENGKMKDAMRYFREMTSK 460
I + +G+ +D + +++M ++
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQ 511
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 103/282 (36%), Gaps = 44/282 (15%)
Query: 231 CVLGNA-HEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCK 289
CV N E V + + K RP Y T I F+ M G +
Sbjct: 143 CVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGY--E 200
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKE----------------------------- 320
P V + +I + RV AL + +MK
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKF 260
Query: 321 ------RGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLL--- 371
G +P+ TY S+I LCK R+++ E+ E +E+ + +P Y+ ++
Sbjct: 261 FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR--VPCTYAYNTMIMGY 318
Query: 372 NSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDR 431
S +E +LER G S YN +L K D K ++EM+++ P+
Sbjct: 319 GSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNL 377
Query: 432 RSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
+Y I+I GK+ A M G+ RT +++
Sbjct: 378 STYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 151/364 (41%), Gaps = 8/364 (2%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
A FF W+ K Y ++D+L + + V E+ E + + L+
Sbjct: 135 AWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALI 194
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQL 216
+ F VEE + ++ ++ G++ L + L+ L V+ AE +F ++
Sbjct: 195 KSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEV-MESGRI 253
Query: 217 HRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXX 276
DI T+N ++ G+C G +A +D+ D TY T I
Sbjct: 254 KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA 313
Query: 277 XFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKH 336
++ M +G P + +I LC + ++ E VF++M +G +PNVA Y LI
Sbjct: 314 LYQEMDEKGIQVPPHAF--SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 337 LCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMER---NGCS 393
K +E L+ M + P+ VTYS ++N L V L+ +G +
Sbjct: 372 YAKSGSVEDAIRLLHRMIDE--GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLA 429
Query: 394 LSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRY 453
++ Y+ ++ K D + ++EM GC D Y +I ++ K+ +A+
Sbjct: 430 INSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIAL 489
Query: 454 FREM 457
F+ M
Sbjct: 490 FKRM 493
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 159/373 (42%), Gaps = 13/373 (3%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED--TFSTLLRRFAAAH 163
K + PT N +++ L + +VF+ M G + D T++T+++ + A
Sbjct: 214 KENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM--ESGRIKPDIVTYNTMIKGYCKAG 271
Query: 164 KVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTW 223
+ ++A+ E G + D + T++ C + + + E + +
Sbjct: 272 QTQKAMEKLRDMETRGHEADKITYMTMIQ-ACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 224 NVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWN 283
++++ G C G +E V+++++ +P++ Y I M +
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 284 EGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRM 343
EG KPDVV + +++ LC RV EAL+ F + G N Y+SLI L K R+
Sbjct: 391 EGF--KPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRV 448
Query: 344 EKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERM-ERNGCSLSDDIY 399
++ L E+M K C ++ Y+ L+++ + +E + +RM E GC + Y
Sbjct: 449 DEAERLFEEMSEK--GCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTY 506
Query: 400 NLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
++L K + K WD M G P + + G +GK+ A + E+
Sbjct: 507 TILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAP 566
Query: 460 KGMVAEPRTEKLV 472
G++ + E ++
Sbjct: 567 MGVILDAACEDMI 579
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 136/326 (41%), Gaps = 44/326 (13%)
Query: 153 STLLRRFAAAHKVEEAISMF-YTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKA 211
S +L+ K + A S F ++R+Q +L+ + +L+ L K V D S+
Sbjct: 120 SFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDV-DRIRFVSSEI 178
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
++F+ + N ++ + LG E VW+ + + P L+TY
Sbjct: 179 KKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTY------------- 225
Query: 272 XXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYN 331
N +++ L V A VF+ M+ +P++ TYN
Sbjct: 226 ------------------------NFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYN 261
Query: 332 SLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVP---GVLERME 388
++IK CK + +K E + DME + + +TY ++ + + + + M+
Sbjct: 262 TMIKGYCKAGQTQKAMEKLRDMETRGHE--ADKITYMTMIQACYADSDFGSCVALYQEMD 319
Query: 389 RNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMK 448
G + ++LV+ K + ++ M R G P+ YT++I G+ ++G ++
Sbjct: 320 EKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVE 379
Query: 449 DAMRYFREMTSKGMVAEPRTEKLVIS 474
DA+R M +G + T +V++
Sbjct: 380 DAIRLLHRMIDEGFKPDVVTYSVVVN 405
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 168/374 (44%), Gaps = 28/374 (7%)
Query: 94 WKPALVFFNWA-SKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTF 152
W+P FF ++ + + TS N++L I+G + ++ E+ R GLVN+ TF
Sbjct: 91 WRPVHRFFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKR-GLVNDKTF 149
Query: 153 STLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAR 212
+L+ A+A ++++ ++ F+ FG +++ + LC+ K VE+A+ +F K +
Sbjct: 150 RIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVF-IKLK 208
Query: 213 EFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXX 272
EF + D T+ ++ G+C +G+ EA ++W +M D+ +
Sbjct: 209 EF-IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFD 267
Query: 273 XXXXXFRGMWNE-GCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYN 331
F M ++ G + D +ID LC R+ A +VF +M+ERG + T+
Sbjct: 268 EASKVFYVMVSKRGGDL--DGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWA 325
Query: 332 SLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERME 388
SLI L RR+ + Y LVE +E P+ Y L+ L K E V +M
Sbjct: 326 SLIYGLLVKRRVVEAYGLVEGVEN------PDISIYHGLIKGLVKIKRASEATEVFRKMI 379
Query: 389 RNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMK 448
+ GC Y ++L+ ++ G R R G P TI + G + GK
Sbjct: 380 QRGCEPIMHTYLMLLQGHL------GRRG------RKGPDPLVNFDTIFVGGMIKAGKRL 427
Query: 449 DAMRYFREMTSKGM 462
+ +Y +G+
Sbjct: 428 ETTKYIERTLKRGL 441
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 152/329 (46%), Gaps = 10/329 (3%)
Query: 150 DTFSTLLRRFAAAHKVEEAISMF-YTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+ F+ + + FA + ++ +F Y + Q + + ++ L R ++ +F
Sbjct: 106 NDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFD 165
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXX 268
+ + R + ++ ++N + G + + + K P + TY T I
Sbjct: 166 EMPSQ-GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARG 224
Query: 269 XXX-XXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
F M +EG +PD+V N ++ A + EA VF+ M + G P++
Sbjct: 225 GLDWEGLLGLFAEMRHEGI--QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDL 282
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVL 384
TY+ L++ K+RR+EKV +L+ +M G +P+ +Y+ LL + +E GV
Sbjct: 283 TTYSHLVETFGKLRRLEKVCDLLGEM--ASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 385 ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYEN 444
+M+ GC+ + + Y+++L L+ + D +R+ + EM+ + PD +Y I+I E
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEG 400
Query: 445 GKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
G K+ + F +M + + + T + +I
Sbjct: 401 GYFKEVVTLFHDMVEENIEPDMETYEGII 429
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 151/374 (40%), Gaps = 7/374 (1%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED 150
R DW+ +L F + + P + ++ +LG+ ++ +VFDEM + +
Sbjct: 118 RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVF 177
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
+++ L+ + + E ++ + + + + + T++ R + ++
Sbjct: 178 SYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAE 237
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
R + DI T+N +L+ + G EA+ V++ + PDL TY+ +
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
M + G PD+ N +++A + EA+ VF M+ GC PN TY
Sbjct: 298 LEKVCDLLGEMASGG--SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTY 355
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLERM 387
+ L+ + R + V +L +E K + P+A TY+ L+ +EV + M
Sbjct: 356 SVLLNLFGQSGRYDDVRQLF--LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 413
Query: 388 ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKM 447
+ Y ++ K + RK M N P ++YT +I +
Sbjct: 414 VEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALY 473
Query: 448 KDAMRYFREMTSKG 461
++A+ F M G
Sbjct: 474 EEALVAFNTMHEVG 487
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 156/396 (39%), Gaps = 42/396 (10%)
Query: 106 KADSYAPTSRVCNEILDILGKMS-RFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHK 164
K + +P+ N +++ + +E L +F EM H + T++TLL A
Sbjct: 203 KNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGL 262
Query: 165 VEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWN 224
+EA +F T G+ DL + L+ + + +E L A L DI ++N
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP-DITSYN 321
Query: 225 VILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNE 284
V+L + G+ EA V+ + A+ C P+ TY+ + F M +
Sbjct: 322 VLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM--K 379
Query: 285 GCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLI---------K 335
N PD N +I+ E + +F DM E EP++ TY +I +
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHE 439
Query: 336 HLCKIRRMEKVYELVEDMERKKG------------------------SCMPNAVTYSCLL 371
KI + ++V + G P+ T+ LL
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL 499
Query: 372 NSL-KGP--EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCG 428
S +G +E +L R+ +G + D +N + Y + + KT+ +ME++ C
Sbjct: 500 YSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCD 559
Query: 429 PDRRSYTIMIHGHYENGKMKDAMR-YFREMTSKGMV 463
PD R+ ++ Y ++ D R F EM + ++
Sbjct: 560 PDERTLEAVLS-VYSFARLVDECREQFEEMKASDIL 594
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 141/352 (40%), Gaps = 10/352 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + +++ GK+ R E++ + EM+ L + +++ LL +A + ++EA+ +
Sbjct: 280 PDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGV 339
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F+ + G + + + LL + +D LF + + D T+N+++ +
Sbjct: 340 FHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL-EMKSSNTDPDAATYNILIEVFG 398
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
G E ++ D++ PD+ TY I + M + P
Sbjct: 399 EGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM--TANDIVPS 456
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
+I+A EAL F M E G P++ T++SL L R V E
Sbjct: 457 SKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSL---LYSFARGGLVKESEA 513
Query: 352 DMERKKGSCMP-NAVTYSCLLNSLKGP---EEVPGVLERMERNGCSLSDDIYNLVLRLYM 407
+ R S +P N T++ + + K EE ME++ C + VL +Y
Sbjct: 514 ILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYS 573
Query: 408 KWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
D R+ ++EM+ + P Y +M+ + + + D EM S
Sbjct: 574 FARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLS 625
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 129/333 (38%), Gaps = 55/333 (16%)
Query: 125 GKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDL 184
GK E+ ++ M+ + + + ++ ++ F A EEA+ F T + G + +
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 185 DAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWK 244
+ F +LL R V+++E + S+ + + R+ T+N + + G EA + +
Sbjct: 493 ETFHSLLYSFARGGLVKESEAIL-SRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYV 551
Query: 245 DIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCF 304
D+ S+C PD ++ F
Sbjct: 552 DMEKSRC-------------------------------------DPDERTLEAVLSVYSF 574
Query: 305 KKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNA 364
+ V E E F++MK P++ Y ++ K R + V EL+E+M + S +
Sbjct: 575 ARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNI--- 631
Query: 365 VTYSCLLNSLKGPEE-------VPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRK 417
+ + +KG + V VL+++ GC L YN +L ++ +
Sbjct: 632 --HQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAAR 689
Query: 418 TWDEMERNGCGPD-----RRSYTIMIHGHYENG 445
+E + G P+ + +++ +H E G
Sbjct: 690 VLNEATKRGLFPELFRKNKLVWSVDVHRMSEGG 722
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 162/391 (41%), Gaps = 55/391 (14%)
Query: 118 NEILDILGK---MSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMF-- 172
N +L LG+ +SR +L DE+ R +V T L+ + +V+EA+ +F
Sbjct: 298 NALLSCLGRNMDISRMNDLVLKMDEVKIRPDVV---TLGILINTLCKSRRVDEALEVFEK 354
Query: 173 ----YTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
T + + D F TL+ LC+ +++AE L E + + T+N +++
Sbjct: 355 MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLID 414
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
G+C G AK V + + +P++ T T + F M EG
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV-- 472
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRR------ 342
K +VV +I A C V +A+ ++ M E GC P+ Y +LI LC++RR
Sbjct: 473 KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR 532
Query: 343 -----------------------------MEKVYELVEDMERKKGSCMPNAVTYSCLLNS 373
EKVYE++ DME++ P+++TY+ L++
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKK--PDSITYNTLISF 590
Query: 374 L---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEME-RNGCGP 429
K E V ++E+M +G + Y V+ Y D K + +M + P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 430 DRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
+ Y I+I+ + G A+ EM K
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 146/363 (40%), Gaps = 12/363 (3%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
AP + N ++D + + E +V M E N T +T++ H + A+
Sbjct: 403 APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
F E+ G+ ++ + TL+ C +VE A ++ K E D K + +++G
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA-MYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C + H+A RV + + DL Y I M EG KP
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK--KP 579
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
D + N +I K + + M+E G +P V TY ++I C + +++ +L
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 351 EDMERKKGSCMPNAVTYSCLLNS---LKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYM 407
+DM PN V Y+ L+N+ L + + E M+ + + YN + +
Sbjct: 640 KDMGLH-SKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 408 KWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPR 467
+ + L K DEM C P++ + I++ E D + R+ VA P
Sbjct: 699 EKTQGETLLKLMDEMVEQSCEPNQITMEILM----ERLSGSDELVKLRKFMQGYSVASP- 753
Query: 468 TEK 470
TEK
Sbjct: 754 TEK 756
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 149/374 (39%), Gaps = 27/374 (7%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV--NEDTFSTLLR-----R 158
+ DS S+V N ++D+L + ++ +V DEM +E + N T +L R
Sbjct: 177 RLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGR 236
Query: 159 FAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHR 218
K+ IS F + G+ + + LC+ A + S + +
Sbjct: 237 LLTEEKIIALISRFSSH---GVSPNSVWLTRFISSLCKNARANAAWDIL-SDLMKNKTPL 292
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIMA---SKCRPDLFTYATFIXXXXXXXXXXXXX 275
+ +N +L+ LG + R+ ++ K RPD+ T I
Sbjct: 293 EAPPFNALLS---CLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEAL 349
Query: 276 XXFRGM----WNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMK-ERGCEPNVATY 330
F M ++G K D + N +ID LC R+ EA E+ MK E C PN TY
Sbjct: 350 EVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTY 409
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERM 387
N LI C+ ++E E+V M K+ PN VT + ++ + G M
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRM--KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 388 ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKM 447
E+ G + Y ++ N + +++M GC PD + Y +I G + +
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 448 KDAMRYFREMTSKG 461
DA+R ++ G
Sbjct: 528 HDAIRVVEKLKEGG 541
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 98/195 (50%), Gaps = 10/195 (5%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMK-ERGCEPNVAT-----YNSLIKHLCKIRR 342
+PDVV +I+ LC +RV EALEVF+ M+ +R + NV +N+LI LCK+ R
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 343 MEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIY 399
+++ EL+ M+ ++ C PNAVTY+CL++ E V+ RM+ + +
Sbjct: 386 LKEAEELLVRMKLEE-RCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 400 NLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
N ++ + + + +ME+ G + +Y +IH ++ AM ++ +M
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 460 KGMVAEPRTEKLVIS 474
G + + +IS
Sbjct: 505 AGCSPDAKIYYALIS 519
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 152/333 (45%), Gaps = 8/333 (2%)
Query: 134 HQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMW 193
+++ EM R +++ T+ T+++ ++ ++ A ++ G ++ + TL+
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461
Query: 194 LCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRP 253
+ DA + + +E + DI +N ++ G EA+ +++ + +P
Sbjct: 462 FLQNSRFGDAMRVLK-EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Query: 254 DLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALE 313
+ FTY FI + M C P+ V+C +I+ C K +V EA
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRE--CGVLPNKVLCTGLINEYCKKGKVIEACS 578
Query: 314 VFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS 373
++ M ++G + TY L+ L K +++ E+ +M R KG P+ +Y L+N
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM-RGKG-IAPDVFSYGVLING 636
Query: 374 ---LKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPD 430
L ++ + + M G + + IYN++L + + + ++ DEM G P+
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 431 RRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
+Y +I G+ ++G + +A R F EM KG+V
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 153/372 (41%), Gaps = 8/372 (2%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
P + ++D L K+ R E+ + EM ++ T+S L+ + A
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ + G+++ + + + + +E A+ LF L + + ++ G+
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS-GLIPQAQAYASLIEGY 392
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C N + + ++ +TY T + + M GC +P
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC--RP 450
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
+VVI +I R +A+ V ++MKE+G P++ YNSLI L K +RM++ +
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 351 EDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGV---LERMERNGCSLSDDIYNLVLRLYM 407
+E + PNA TY ++ E ++ M G + + ++ Y
Sbjct: 511 --VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 408 KWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPR 467
K + M G D ++YT++++G ++N K+ DA FREM KG+ +
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 468 TEKLVISMNSPL 479
+ ++I+ S L
Sbjct: 629 SYGVLINGFSKL 640
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 148/343 (43%), Gaps = 15/343 (4%)
Query: 128 SRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAF 187
S F + EM L N+ + L+ + KV EA S + + G+ D +
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595
Query: 188 RTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIM 247
L+ L + V+DAE +F + R + D+ ++ V++NG+ LGN +A ++ +++
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFR-EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 248 ASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKR 307
P++ Y + M +G + P+ V IID C
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH--PNAVTYCTIIDGYCKSGD 712
Query: 308 VPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTY 367
+ EA +F +MK +G P+ Y +L+ C++ +E+ + KKG C + +
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG--TNKKG-CASSTAPF 769
Query: 368 SCLLN---SLKGPEEVPGVLERM-----ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTW 419
+ L+N E VL R+ +R G +D YN+++ K N + ++ +
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 420 DEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
+M+ P +YT +++G+ + G+ + F E + G+
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI 871
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 148/359 (41%), Gaps = 13/359 (3%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P +C +++ K + E + M + L + T++ L+ KV++A +
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F G+ D+ ++ L+ + +++ A ++F E L ++ +N++L G+C
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE-GLTPNVIIYNMLLGGFC 673
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
G +AK + ++ P+ TY T I F M +G PD
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL--VPD 731
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
+ ++D C V A+ +F K +GC + A +N+LI + K + E E++
Sbjct: 732 SFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Query: 352 DMERKKGS----CMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLR 404
+ GS PN VTY+ +++ L E + +M+ + Y +L
Sbjct: 791 RL--MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 405 LYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
Y K + + +DE G PD Y+++I+ + G A+ +M +K V
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 116/270 (42%), Gaps = 15/270 (5%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + I+D K E ++FDEM + + + ++TL+ + VE AI++
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVE----DAETLFHSKAREFQLHRDIKTWNVIL 227
F T ++ G F L+ W+ ++ E L F D+ T+N+++
Sbjct: 755 FGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV-TYNIMI 812
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCN 287
+ C GN AK ++ + + P + TY + + F G
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI- 871
Query: 288 CKPDVVICNCIIDALCFKKRVPEALEVFQDMKER-----GCEPNVATYNSLIKHLCKIRR 342
+PD ++ + II+A + +AL + M + GC+ +++T +L+ K+
Sbjct: 872 -EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 930
Query: 343 MEKVYELVEDMERKKGSCMPNAVTYSCLLN 372
ME +++E+M R + +P++ T L+N
Sbjct: 931 MEVAEKVMENMVRLQ--YIPDSATVIELIN 958
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 5/169 (2%)
Query: 308 VPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTY 367
V AL++ + M +G P TY+ LI LCKI+R+E L+ +M+ G + N TY
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMD-SLGVSLDNH-TY 315
Query: 368 SCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMER 424
S L++ L + + G++ M +G ++ +Y+ + + K + + +D M
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIA 375
Query: 425 NGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
+G P ++Y +I G+ ++ EM + +V P T V+
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 163/391 (41%), Gaps = 55/391 (14%)
Query: 118 NEILDILGK---MSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYT 174
N +L LG+ +SR +L DE+ R +V T L+ + +V+EA+ +F
Sbjct: 298 NALLSCLGRNMDISRMNDLVLKMDEVKIRPDVV---TLGILINTLCKSRRVDEALEVFEQ 354
Query: 175 ----REQFGLDLDLDA--FRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
R G + D+ F TL+ LC+ +++AE L E + + T+N +++
Sbjct: 355 MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLID 414
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
G+C G AK V + + +P++ T T + F M EG
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV-- 472
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRR------ 342
K +VV +I A C V +A+ ++ M E GC P+ Y +LI LC++RR
Sbjct: 473 KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR 532
Query: 343 -----------------------------MEKVYELVEDMERKKGSCMPNAVTYSCLLNS 373
EKVYE++ DME++ P+++TY+ L++
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK--PDSITYNTLISF 590
Query: 374 L---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEME-RNGCGP 429
K E V ++E+M +G + Y V+ Y D K + +M + P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 430 DRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
+ Y I+I+ + G A+ EM K
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 145/363 (39%), Gaps = 12/363 (3%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
P + N ++D + + E +V M E N T +T++ H + A+
Sbjct: 403 VPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
F E+ G+ ++ + TL+ C +VE A ++ K E D K + +++G
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA-MYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C + H+A RV + + DL Y I M EG KP
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK--KP 579
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
D + N +I K + + M+E G +P V TY ++I C + +++ +L
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 351 EDMERKKGSCMPNAVTYSCLLNS---LKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYM 407
+DM PN V Y+ L+N+ L + + E M+ + + YN + +
Sbjct: 640 KDMGLH-SKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 408 KWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPR 467
+ + L K DEM C P++ + I++ E D + R+ VA P
Sbjct: 699 EKTQGETLLKLMDEMVEQSCEPNQITMEILM----ERLSGSDELVKLRKFMQGYSVASP- 753
Query: 468 TEK 470
TEK
Sbjct: 754 TEK 756
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 149/374 (39%), Gaps = 27/374 (7%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV--NEDTFSTLL-----RR 158
+ DS S+V N ++D+L + ++ +V DEM +E + N T +L R
Sbjct: 177 RLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKER 236
Query: 159 FAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHR 218
K+ IS F + G+ + + LC+ A + S + +
Sbjct: 237 LLTEEKIIALISRFSSH---GVSPNSVWLTRFISSLCKNARANTAWDIL-SDLMKNKTPL 292
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIMA---SKCRPDLFTYATFIXXXXXXXXXXXXX 275
+ +N +L+ LG + R+ ++ K RPD+ T I
Sbjct: 293 EAPPFNALLS---CLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEAL 349
Query: 276 XXFRGM----WNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMK-ERGCEPNVATY 330
F M ++G K D + N +ID LC R+ EA E+ MK E C PN TY
Sbjct: 350 EVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTY 409
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERM 387
N LI C+ ++E E+V M K+ PN VT + ++ + G M
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRM--KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 388 ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKM 447
E+ G + Y ++ N + +++M GC PD + Y +I G + +
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 448 KDAMRYFREMTSKG 461
DA+R ++ G
Sbjct: 528 HDAIRVVEKLKEGG 541
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMK-ERGCEPNVAT-----YNSLIKHLCKIRR 342
+PDVV +I+ LC +RV EALEVF+ M+ +R + NV +N+LI LCK+ R
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 343 MEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIY 399
+++ EL+ M+ ++ C+PNAVTY+CL++ E V+ RM+ + +
Sbjct: 386 LKEAEELLVRMKLEE-RCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 400 NLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
N ++ + + + +ME+ G + +Y +IH ++ AM ++ +M
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 460 KGMVAEPRTEKLVIS 474
G + + +IS
Sbjct: 505 AGCSPDAKIYYALIS 519
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 154/377 (40%), Gaps = 12/377 (3%)
Query: 108 DSYAPTSRVCNEILDILGKMSRFEELHQVFD---EMSHREGLVNEDTFSTLLRRFAAAHK 164
D TS L LG +F+ + FD + + +++ + ++ +
Sbjct: 129 DKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGR 188
Query: 165 VEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWN 224
V A +MF ++ G LD+ ++ +L+ +A +F K E + T+N
Sbjct: 189 VSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFK-KMEEDGCKPTLITYN 247
Query: 225 VILNGWCVLGNA-HEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWN 283
VILN + +G ++ + + + + PD +TY T I F M
Sbjct: 248 VILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA 307
Query: 284 EGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRM 343
G + D V N ++D R EA++V +M G P++ TYNSLI + +
Sbjct: 308 AGFSY--DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGML 365
Query: 344 EKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLERMERNGCSLSDDIYN 400
++ EL M K P+ TY+ LL+ + E + E M GC + +N
Sbjct: 366 DEAMELKNQMAEK--GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFN 423
Query: 401 LVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
+++Y + K +DE+ G PD ++ ++ +NG + F+EM
Sbjct: 424 AFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 483
Query: 461 GMVAEPRTEKLVISMNS 477
G V E T +IS S
Sbjct: 484 GFVPERETFNTLISAYS 500
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 147/366 (40%), Gaps = 45/366 (12%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
K+D AP + N ++ + S +E QVF+EM ++ T++ LL + +H+
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
+EA+ + ++ L+ F I T+N
Sbjct: 331 KEAMKVLN-------EMVLNGFSP-----------------------------SIVTYNS 354
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
+++ + G EA + + +PD+FTY T + F M N G
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
CKP++ N I + + E +++F ++ G P++ T+N+L+ + +
Sbjct: 415 --CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 346 VYELVEDMERKKGSCMPNAVTYSCLLNSLK---GPEEVPGVLERMERNGCSLSDDIYNLV 402
V + ++M K+ +P T++ L+++ E+ V RM G + YN V
Sbjct: 473 VSGVFKEM--KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530
Query: 403 LRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
L + + K EME C P+ +Y ++H Y NGK M E G+
Sbjct: 531 LAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA-YANGKEIGLMHSLAEEVYSGV 589
Query: 463 VAEPRT 468
+ EPR
Sbjct: 590 I-EPRA 594
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 164/405 (40%), Gaps = 45/405 (11%)
Query: 108 DSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEE 167
+ ++P+ N ++ + +E ++ ++M+ + + T++TLL F A KVE
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVES 402
Query: 168 AISMFYTREQFGLDLDLDAFRTLL-MWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
A+S+F G ++ F + M+ R K E + + L DI TWN +
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF--DEINVCGLSPDIVTWNTL 460
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC 286
L + G E V+K++ + P+ T+ T I +R M + G
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKV 346
PD+ N ++ AL ++ +V +M++ C+PN TY SL+ + + +
Sbjct: 521 T--PDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLM 578
Query: 347 YELVEDMERKKGSCMPNAVTYSCL-------------------------------LNSL- 374
+ L E E G P AV L LNS+
Sbjct: 579 HSLAE--EVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636
Query: 375 ------KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCG 428
+ + GVL+ M+ G + S YN ++ ++ + + + E+ G
Sbjct: 637 SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK 696
Query: 429 PDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
PD SY +I+ + N +M+DA R F EM + G+V + T I
Sbjct: 697 PDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 158/409 (38%), Gaps = 60/409 (14%)
Query: 97 ALVFFNWASKADSYAPT--SRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFST 154
AL F+W K Y + V I+ +LGK R +F+ + ++ ++++
Sbjct: 154 ALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTS 213
Query: 155 LLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYK---------------- 198
L+ FA + + EA+++F E+ G L + +L +
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 199 ---------------------HVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
H E A+ KA F D T+N +L+ V G +H
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSY--DKVTYNALLD---VYGKSH 328
Query: 238 ---EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVI 294
EA +V +++ + P + TY + I M +G KPDV
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT--KPDVFT 386
Query: 295 CNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIK---HLCKIRRMEKVYELVE 351
++ +V A+ +F++M+ GC+PN+ T+N+ IK + K M K+++
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD--- 443
Query: 352 DMERKKGSCMPNAVTYSCLLNSLKG---PEEVPGVLERMERNGCSLSDDIYNLVLRLYMK 408
E P+ VT++ LL EV GV + M+R G + +N ++ Y +
Sbjct: 444 --EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
Query: 409 WDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
+ + + M G PD +Y ++ G + + + EM
Sbjct: 502 CGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 140/341 (41%), Gaps = 43/341 (12%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNE-DTFSTLLRRFAAAHKVEEAI 169
+P N +L + G+ E+ VF EM R G V E +TF+TL+ ++ E+A+
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 170 SMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAE-------------------TLFHSK 210
+++ G+ DL + T+L L R E +E +L H+
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 211 A--REFQLHRDI--KTWNVILNGWCVLGNA-----------HEAKRVWKDIMASKCRPDL 255
A +E L + + ++ ++ VL EA+R + ++ PD+
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 256 FTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVF 315
T + + M G P + N ++ ++ E+
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFT--PSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 316 QDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLK 375
+++ +G +P++ +YN++I C+ RM + +M + +P+ +TY+ + S
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM--RNSGIVPDVITYNTFIGSYA 745
Query: 376 GP---EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQD 413
EE GV+ M ++GC + + YN ++ Y K + +D
Sbjct: 746 ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKD 786
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 106/279 (37%), Gaps = 40/279 (14%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV----- 165
P N +L L + +E+ +V EM NE T+ +LL +A ++
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 166 ------------------------------EEAISMFYTREQFGLDLDLDAFRTLLMWLC 195
EA F ++ G D+ +++
Sbjct: 581 LAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYG 640
Query: 196 RYKHVEDAETLF-HSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
R + V A + + K R F + T+N ++ + +++ + ++I+A +PD
Sbjct: 641 RRQMVAKANGVLDYMKERGFT--PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Query: 255 LFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEV 314
+ +Y T I F M N G PDV+ N I + EA+ V
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRNSGI--VPDVITYNTFIGSYAADSMFEEAIGV 756
Query: 315 FQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDM 353
+ M + GC PN TYNS++ CK+ R ++ VED+
Sbjct: 757 VRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 82/208 (39%), Gaps = 3/208 (1%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + + ++ + K E + F E+ R + T ++++ + V +A +
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV 651
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
++ G + + +L+ R +E + + + DI ++N ++ +C
Sbjct: 652 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK-GIKPDIISYNTVIYAYC 710
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
+A R++ ++ S PD+ TY TFI R M GC +P+
Sbjct: 711 RNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGC--RPN 768
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMK 319
N I+D C R EA +D++
Sbjct: 769 QNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 163/391 (41%), Gaps = 55/391 (14%)
Query: 118 NEILDILGK---MSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYT 174
N +L LG+ +SR +L DE+ R +V T L+ + +V+EA+ +F
Sbjct: 298 NALLSCLGRNMDISRMNDLVLKMDEVKIRPDVV---TLGILINTLCKSRRVDEALEVFEQ 354
Query: 175 ----REQFGLDLDLDA--FRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
R G + D+ F TL+ LC+ +++AE L E + + T+N +++
Sbjct: 355 MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLID 414
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
G+C G AK V + + +P++ T T + F M EG
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV-- 472
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRR------ 342
K +VV +I A C V +A+ ++ M E GC P+ Y +LI LC++RR
Sbjct: 473 KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR 532
Query: 343 -----------------------------MEKVYELVEDMERKKGSCMPNAVTYSCLLNS 373
EKVYE++ DME++ P+++TY+ L++
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK--PDSITYNTLISF 590
Query: 374 L---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEME-RNGCGP 429
K E V ++E+M +G + Y V+ Y D K + +M + P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 430 DRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
+ Y I+I+ + G A+ EM K
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 149/374 (39%), Gaps = 27/374 (7%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV--NEDTFSTLL-----RR 158
+ DS S+V N ++D+L + ++ +V DEM +E + N T +L R
Sbjct: 177 RLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKER 236
Query: 159 FAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHR 218
K+ IS F + G+ + + LC+ A + S + +
Sbjct: 237 LLTEEKIIALISRFSSH---GVSPNSVWLTRFISSLCKNARANTAWDIL-SDLMKNKTPL 292
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIMA---SKCRPDLFTYATFIXXXXXXXXXXXXX 275
+ +N +L+ LG + R+ ++ K RPD+ T I
Sbjct: 293 EAPPFNALLS---CLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEAL 349
Query: 276 XXFRGM----WNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMK-ERGCEPNVATY 330
F M ++G K D + N +ID LC R+ EA E+ MK E C PN TY
Sbjct: 350 EVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTY 409
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERM 387
N LI C+ ++E E+V M K+ PN VT + ++ + G M
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRM--KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 388 ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKM 447
E+ G + Y ++ N + +++M GC PD + Y +I G + +
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 448 KDAMRYFREMTSKG 461
DA+R ++ G
Sbjct: 528 HDAIRVVEKLKEGG 541
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMK-ERGCEPNVAT-----YNSLIKHLCKIRR 342
+PDVV +I+ LC +RV EALEVF+ M+ +R + NV +N+LI LCK+ R
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 343 MEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIY 399
+++ EL+ M+ ++ C+PNAVTY+CL++ E V+ RM+ + +
Sbjct: 386 LKEAEELLVRMKLEE-RCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 400 NLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
N ++ + + + +ME+ G + +Y +IH ++ AM ++ +M
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 460 KGMVAEPRTEKLVIS 474
G + + +IS
Sbjct: 505 AGCSPDAKIYYALIS 519
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 111/287 (38%), Gaps = 45/287 (15%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQ--VFDEMSHREGLV-NEDTFSTLLRRFAAA 162
K D P N I+ G M R L+ VF +EG+ N T+ TL+ +
Sbjct: 433 KEDEIKPNVVTVNTIV---GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 163 HKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKT 222
VE+A+ + + G D + L+ LC+ + DA + K +E D+
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE-KLKEGGFSLDLLA 548
Query: 223 WNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMW 282
+N+++ +C NA + + D+ +PD TY T I M
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 283 NEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDM------------------------ 318
+G + P V +IDA C + EAL++F+DM
Sbjct: 609 EDGLD--PTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Query: 319 ------------KERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDM 353
K + PNV TYN+L K L + + E + +L+++M
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 172/412 (41%), Gaps = 40/412 (9%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDT-FSTL 155
AL F WAS + + + L RF+ ++Q+ DEM GL +D F T+
Sbjct: 59 ALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTI 118
Query: 156 LRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ 215
+R F A ++ IS+ +FG+ L F ++L L + + ++ A F K
Sbjct: 119 IRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMASG 177
Query: 216 LHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFI-----------XX 264
+H D+ T+ +++ G + + ++ + + S P+ Y T +
Sbjct: 178 IHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRAR 237
Query: 265 XXXXXXXXXXXXXFRGMWNEGCNCK------------------PDVVICNCIIDALCFKK 306
F + + CN + PDVV +++ LC +
Sbjct: 238 SLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEG 297
Query: 307 RVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVT 366
RV EALEV + ++ +G + +V N+L+K C + +M +MERK +PN T
Sbjct: 298 RVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERK--GYLPNVET 355
Query: 367 YSCLLNSLKGPEEVPGVLER---MERNGCSLSDDIYNLVLR-LYMKWDNQDGLRKTWDEM 422
Y+ L+ + L+ M+ + + +N ++R L + DGL K + M
Sbjct: 356 YNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGL-KILEMM 414
Query: 423 ERNGC--GPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLV 472
+ + G Y +I+G Y+ + +DA+ + +M A R+ KL+
Sbjct: 415 QDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLI 466
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 164/406 (40%), Gaps = 59/406 (14%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED-TFSTLLRRFAAAHKVEEAIS 170
P+ +V N ILD+L K + + F G+ + T+ L++ + +++ +
Sbjct: 145 PSLKVFNSILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFK 203
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ + G+ + + TLL LC+ V A +L E + D+ T+N++++ +
Sbjct: 204 LLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMS----EMKEPNDV-TFNILISAY 258
Query: 231 CVLGNAHEAKRVWKDIMASKC-----RPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
C +E K + ++ KC PD+ T + + ++G
Sbjct: 259 C-----NEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG 313
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
K DVV CN ++ C ++ A F +M+ +G PNV TYN LI C + ++
Sbjct: 314 G--KVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDS 371
Query: 346 VYELVEDMERKKGSCMPNAVTYSCLLNSLK-GPEEVPG--VLERMERNGC--SLSDDIYN 400
+ DM K + N T++ L+ L G G +LE M+ + D YN
Sbjct: 372 ALDTFNDM--KTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYN 429
Query: 401 LVLRLYMK---WDN------------------------------QDGLRKTWDEMERNGC 427
V+ + K W++ D L+ +D+M G
Sbjct: 430 CVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGG 489
Query: 428 GPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
P +IH + ++GK+++++ +M ++G + T VI
Sbjct: 490 VPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVI 535
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 155/420 (36%), Gaps = 54/420 (12%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
K AP + V N +L L K + + EM N+ TF+ L+ + K+
Sbjct: 209 KTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEP----NDVTFNILISAYCNEQKL 264
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDA-ETLFHSKAREFQLHRDIKTWN 224
+++ + G D+ ++ LC V +A E L +++ ++ D+ N
Sbjct: 265 IQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKV--DVVACN 322
Query: 225 VILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNE 284
++ G+C LG A+R + ++ P++ TY I F M +
Sbjct: 323 TLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTD 382
Query: 285 GCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGC--EPNVATYNSLIKHLCKIRR 342
+ + N +I L R + L++ + M++ + YN +I K R
Sbjct: 383 AI--RWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENR 440
Query: 343 MEKVYELVEDMER----------------KKGSC---------------MPNAVTYSCLL 371
E E + ME+ +KG +P+ + CL+
Sbjct: 441 WEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLI 500
Query: 372 N--SLKGP-EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCG 428
+ S G EE ++ M G +N V+ + K D K ++M GC
Sbjct: 501 HRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCV 560
Query: 429 PDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPR---------TEKLVISMNSPL 479
PD SY ++ G ++ A F M K +V +P ++K I +NS L
Sbjct: 561 PDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSL 620
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 162/378 (42%), Gaps = 12/378 (3%)
Query: 94 WKPALVFFNW---ASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED 150
W+ A+ F W +S + + +V + ILG+ S++ ++ D++ +E L++
Sbjct: 152 WERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVR 211
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
++T+L ++ K E+AI +F ++ G L + +L + +
Sbjct: 212 AYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDE 271
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
R L D T + +L+ G EAK + ++ + P TY +
Sbjct: 272 MRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
+ M E +C D V N ++ A EA V + M ++G PN TY
Sbjct: 332 YTEALSVLKEM--EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITY 389
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE----EVPGVLER 386
++I K + ++ +L M K+ C+PN TY+ +L SL G + E+ +L
Sbjct: 390 TTVIDAYGKAGKEDEALKLFYSM--KEAGCVPNTCTYNAVL-SLLGKKSRSNEMIKMLCD 446
Query: 387 MERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGK 446
M+ NGCS + +N +L L + + + EM+ G PDR ++ +I + G
Sbjct: 447 MKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Query: 447 MKDAMRYFREMTSKGMVA 464
DA + + EMT G A
Sbjct: 507 EVDASKMYGEMTRAGFNA 524
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 148/360 (41%), Gaps = 14/360 (3%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
K++ +P N +L + G + +++VF EM + DTF+TL+ +
Sbjct: 448 KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 507
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWN 224
+A M+ + G + + + LL L R E + K++ F+ +++
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTE--TSYS 565
Query: 225 VILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNE 284
++L + GN +R+ I + P T + F
Sbjct: 566 LMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKH 625
Query: 285 GCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRME 344
G KPD+VI N ++ +A + + ++E G P++ TYNSL+ +RR E
Sbjct: 626 G--YKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMY--VRRGE 681
Query: 345 --KVYELVEDMERKKGSCMPNAVTYSCLLNSL--KG-PEEVPGVLERMERNGCSLSDDIY 399
K E+++ +E K P+ V+Y+ ++ +G +E +L M G Y
Sbjct: 682 CWKAEEILKTLE--KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTY 739
Query: 400 NLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
N + Y + + M +N C P+ ++ +++ G+ GK +AM + ++ +
Sbjct: 740 NTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT 799
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 128/312 (41%), Gaps = 41/312 (13%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
TF+TL+ +V +A+++ + G + T++ LC+ E A L SK
Sbjct: 12 TFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGDTESALNLL-SK 66
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
E + + +N I++ C G+ A+ ++ ++ PD+ TY+ I
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
R M N PDVV + +I+AL + +V EA E++ DM RG P TY
Sbjct: 127 WTDAEQLLRDMIERQIN--PDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERN 390
NS+I CK R+ +++ M K SC P+ VT+S L+N
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASK--SCSPDVVTFSTLING----------------- 225
Query: 391 GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDA 450
Y K D + + EM R G + +YT +IHG + G + A
Sbjct: 226 ---------------YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 270
Query: 451 MRYFREMTSKGM 462
M S G+
Sbjct: 271 QDLLNVMISSGV 282
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 17/261 (6%)
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXF 278
D+ T+ ++NG C G +A + ++ +P Y T I
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLL 64
Query: 279 RGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLC 338
M E + K VVI N IID LC A +F +M ++G P+V TY+ +I C
Sbjct: 65 SKM--EETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 339 KIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL------KGPEEVPGVLERMERNGC 392
+ R +L+ DM ++ + P+ VT+S L+N+L EE+ G M R G
Sbjct: 123 RSGRWTDAEQLLRDMIERQIN--PDVVTFSALINALVKEGKVSEAEEIYG---DMLRRGI 177
Query: 393 SLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMR 452
+ YN ++ + K D + ++ D M C PD +++ +I+G+ + ++ + M
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237
Query: 453 YFREMTSKGMVAEPRTEKLVI 473
F EM +G+VA T +I
Sbjct: 238 IFCEMHRRGIVANTVTYTTLI 258
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 3/241 (1%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N I+D L K +F EM + + T+S ++ F + + +A + +
Sbjct: 80 NAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIE 139
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
++ D+ F L+ L + V +AE ++ R I T+N +++G+C +
Sbjct: 140 RQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI-TYNSMIDGFCKQDRLN 198
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
+AKR+ + + C PD+ T++T I F M G + V
Sbjct: 199 DAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI--VANTVTYTT 256
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
+I C + A ++ M G PN T+ S++ LC + + K + ++ED+++ +
Sbjct: 257 LIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
Query: 358 G 358
G
Sbjct: 317 G 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 9/146 (6%)
Query: 318 MKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL--- 374
M E GC P+V T+ +L+ LC R+ + LV+ M + Y ++N L
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ------PYGTIINGLCKM 54
Query: 375 KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSY 434
E +L +ME IYN ++ K + + + EM G PD +Y
Sbjct: 55 GDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITY 114
Query: 435 TIMIHGHYENGKMKDAMRYFREMTSK 460
+ MI +G+ DA + R+M +
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIER 140
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 157/365 (43%), Gaps = 9/365 (2%)
Query: 103 WASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAA 162
W+++ + P V + + +L + EE Q F +M + + LL RFA
Sbjct: 182 WSTR-NVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKL 240
Query: 163 HKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKT 222
K ++ F G + + ++ +C+ VE A LF + + L D T
Sbjct: 241 GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFE-EMKFRGLVPDTVT 299
Query: 223 WNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMW 282
+N +++G+ +G + ++++ C PD+ TY I +R M
Sbjct: 300 YNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM- 358
Query: 283 NEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRR 342
+G KP+VV + ++DA C + + +A++ + DM+ G PN TY SLI CKI
Sbjct: 359 -KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 343 MEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE---EVPGVLERMERNGCSLSDDIY 399
+ + L +M + N VTY+ L++ L E E + +M+ G + Y
Sbjct: 418 LSDAFRLGNEMLQV--GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASY 475
Query: 400 NLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
N ++ ++K N D + +E++ G PD Y I G K++ A EM
Sbjct: 476 NALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE 535
Query: 460 KGMVA 464
G+ A
Sbjct: 536 CGIKA 540
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 153/351 (43%), Gaps = 8/351 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
PT N ++D + K E +F+EM R + + T+++++ F ++++ +
Sbjct: 260 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 319
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F + + D+ + L+ C++ + F+ + + L ++ +++ +++ +C
Sbjct: 320 FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE-FYREMKGNGLKPNVVSYSTLVDAFC 378
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
G +A + + D+ P+ +TY + I M G + +
Sbjct: 379 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG--VEWN 436
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
VV +ID LC +R+ EA E+F M G PN+A+YN+LI K + M++ EL+
Sbjct: 437 VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLN 496
Query: 352 DMERKKGSCMPNAVTYSCL---LNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMK 408
E K P+ + Y L SL+ E V+ M+ G + IY ++ Y K
Sbjct: 497 --ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554
Query: 409 WDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
N DEM+ ++ ++I G +N + A+ YF +++
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 119/294 (40%), Gaps = 72/294 (24%)
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
F L L +E+A F SK + F++ ++ N +L+ + LG + KR +KD
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCF-SKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 246 IMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFK 305
++ + RP +FTY N +ID +C +
Sbjct: 253 MIGAGARPTVFTY-------------------------------------NIMIDCMCKE 275
Query: 306 KRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAV 365
V A +F++MK RG P+ TYNS+I K+ R++ E+M K C P+ +
Sbjct: 276 GDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM--KDMCCEPDVI 333
Query: 366 TYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERN 425
TY+ L+N ++P LE + EM+ N
Sbjct: 334 TYNALINCFCKFGKLPIGLE--------------------------------FYREMKGN 361
Query: 426 GCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISMNSPL 479
G P+ SY+ ++ + G M+ A++++ +M G+V T +I N +
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKI 415
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 163/391 (41%), Gaps = 44/391 (11%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
P + N ++D GK+ R ++ F+EM + T++ L+ F K+ +
Sbjct: 294 VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE 353
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ + GL ++ ++ TL+ C+ ++ A F+ R L + T+ +++
Sbjct: 354 FYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA-IKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C +GN +A R+ +++ ++ TY I F M G P
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV--IP 470
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
++ N +I K + ALE+ ++K RG +P++ Y + I LC + ++E ++
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Query: 351 EDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMER--------NGCSLSD--- 396
+M K+ N++ Y+ L+++ P E +L+ M+ C L D
Sbjct: 531 NEM--KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 397 ---------DIYNLVLRLYMKWDNQ-------DGLRK---------TWDEMERNGCGPDR 431
D +N + + N DGL K +++M + G PDR
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 648
Query: 432 RSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
+YT ++ G+++ G + +A+ +M GM
Sbjct: 649 TAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 152/362 (41%), Gaps = 11/362 (3%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV-NEDTFSTLLRRFAAAHK 164
K + P + ++D K ++ + + +M R GLV NE T+++L+
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM-RRVGLVPNEYTYTSLIDANCKIGN 417
Query: 165 VEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWN 224
+ +A + Q G++ ++ + L+ LC + +++AE LF K + ++ ++N
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF-GKMDTAGVIPNLASYN 476
Query: 225 VILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNE 284
+++G+ N A + ++ +PDL Y TFI M +
Sbjct: 477 ALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM--K 534
Query: 285 GCNCKPDVVICNCIIDALCFKKRVP-EALEVFQDMKERGCEPNVATYNSLIKHLCKIRRM 343
C K + +I ++DA FK P E L + +MKE E V T+ LI LCK + +
Sbjct: 535 ECGIKANSLIYTTLMDAY-FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593
Query: 344 EKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPG---VLERMERNGCSLSDDIYN 400
K + + G NA ++ +++ L +V + E+M + G Y
Sbjct: 594 SKAVDYFNRISNDFG-LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652
Query: 401 LVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
++ K N D+M G D +YT ++ G +++ A + EM +
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 712
Query: 461 GM 462
G+
Sbjct: 713 GI 714
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 5/188 (2%)
Query: 278 FRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHL 337
F +W+ C P + + + L + EA++ F MK P + N L+
Sbjct: 178 FDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRF 237
Query: 338 CKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSL 394
K+ + + V +DM P TY+ +++ + E G+ E M+ G
Sbjct: 238 AKLGKTDDVKRFFKDM--IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP 295
Query: 395 SDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYF 454
YN ++ + K D ++EM+ C PD +Y +I+ + GK+ + ++
Sbjct: 296 DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFY 355
Query: 455 REMTSKGM 462
REM G+
Sbjct: 356 REMKGNGL 363
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 125/291 (42%), Gaps = 12/291 (4%)
Query: 124 LGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAA---HKVEEAISMFYTREQFGL 180
L + R +E + E++ + + T++ LL+ H V E + R+ F +
Sbjct: 169 LCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM--RDDFDV 226
Query: 181 DLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAK 240
DL +F L+ +C K++ +A L SK D +N I+ G+C L EA
Sbjct: 227 KPDLVSFTILIDNVCNSKNLREAMYLV-SKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 241 RVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIID 300
V+K + PD TY T I + M + G +PD +++
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY--EPDTATYTSLMN 343
Query: 301 ALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSC 360
+C K AL + ++M+ RGC PN TYN+L+ LCK R M+K EL E M+
Sbjct: 344 GMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKL 403
Query: 361 MPNAVTYSCLLNSLKGPEEVPGVLERMER--NGCSLSDDIYNLVLRLYMKW 409
N Y+ L+ SL +V E + + SLSD L +KW
Sbjct: 404 ESNG--YATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTLKW 452
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 135/285 (47%), Gaps = 12/285 (4%)
Query: 199 HVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKC--RPDLF 256
++ DA++LF+S A ++ D+K N +L + + ++ ++++ I+ S+ RP
Sbjct: 64 NLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRS 123
Query: 257 TYATFIXXX--XXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEV 314
T+ + M N G +PD V + + +LC RV EA ++
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGL--EPDQVTTDIAVRSLCETGRVDEAKDL 181
Query: 315 FQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL 374
+++ E+ P+ TYN L+KHLCK + + VYE V++M R P+ V+++ L++++
Sbjct: 182 MKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM-RDDFDVKPDLVSFTILIDNV 240
Query: 375 ---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDR 431
K E ++ ++ G +YN +++ + + +M+ G PD+
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 432 RSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISMN 476
+Y +I G + G++++A Y + M G EP T MN
Sbjct: 301 ITYNTLIFGLSKAGRVEEARMYLKTMVDAGY--EPDTATYTSLMN 343
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 9/280 (3%)
Query: 179 GLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHE 238
GL+ D + LC V++A+ L + E D T+N +L C + H
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMK-ELTEKHSPPDTYTYNFLLKHLCKCKDLHV 212
Query: 239 AKRVWKDIMAS-KCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
++ +PDL ++ I + N G KPD + N
Sbjct: 213 VYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGF--KPDCFLYNT 270
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
I+ C + EA+ V++ MKE G EP+ TYN+LI L K R+E+ ++ M
Sbjct: 271 IMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM--VD 328
Query: 358 GSCMPNAVTYSCLLNSLKGPEEVPG---VLERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
P+ TY+ L+N + E G +LE ME GC+ +D YN +L K D
Sbjct: 329 AGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDK 388
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYF 454
+ ++ M+ +G + Y ++ ++GK+ +A F
Sbjct: 389 GMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 135/285 (47%), Gaps = 12/285 (4%)
Query: 199 HVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKC--RPDLF 256
++ DA++LF+S A ++ D+K N +L + + ++ ++++ I+ S+ RP
Sbjct: 64 NLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRS 123
Query: 257 TYATFIXXX--XXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEV 314
T+ + M N G +PD V + + +LC RV EA ++
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGL--EPDQVTTDIAVRSLCETGRVDEAKDL 181
Query: 315 FQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL 374
+++ E+ P+ TYN L+KHLCK + + VYE V++M R P+ V+++ L++++
Sbjct: 182 MKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM-RDDFDVKPDLVSFTILIDNV 240
Query: 375 ---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDR 431
K E ++ ++ G +YN +++ + + +M+ G PD+
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 432 RSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISMN 476
+Y +I G + G++++A Y + M G EP T MN
Sbjct: 301 ITYNTLIFGLSKAGRVEEARMYLKTMVDAGY--EPDTATYTSLMN 343
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 87/212 (41%), Gaps = 2/212 (0%)
Query: 128 SRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAF 187
S +H+V + M + ++ T +R +V+EA + + D +
Sbjct: 138 SSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTY 197
Query: 188 RTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIM 247
LL LC+ K + +F + D+ ++ ++++ C N EA + +
Sbjct: 198 NFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLG 257
Query: 248 ASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKR 307
+ +PD F Y T + ++ M EG +PD + N +I L R
Sbjct: 258 NAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV--EPDQITYNTLIFGLSKAGR 315
Query: 308 VPEALEVFQDMKERGCEPNVATYNSLIKHLCK 339
V EA + M + G EP+ ATY SL+ +C+
Sbjct: 316 VEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 152/366 (41%), Gaps = 43/366 (11%)
Query: 116 VCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTR 175
V N ++D +++RF+E +VF M + TF+T++R ++EEA+ +F+
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Query: 176 EQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGN 235
+ GL+ D A+ TL+ C++ LF R ++ DI NV+++
Sbjct: 558 FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN-KISADIAVCNVVIHLLFKCHR 616
Query: 236 AHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVIC 295
+A + + +++ K PD+ TY
Sbjct: 617 IEDASKFFNNLIEGKMEPDIVTY------------------------------------- 639
Query: 296 NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
N +I C +R+ EA +F+ +K PN T LI LCK M+ + M
Sbjct: 640 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699
Query: 356 KKGSCMPNAVTYSCLLNSLKGPEEVPG---VLERMERNGCSLSDDIYNLVLRLYMKWDNQ 412
K PNAVTY CL++ ++ G + E M+ G S S Y++++ K
Sbjct: 700 KGSK--PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRV 757
Query: 413 DGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLV 472
D + + PD +Y I+I G+ + G++ +A + M G+ + ++ +
Sbjct: 758 DEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Query: 473 ISMNSP 478
N P
Sbjct: 818 SEYNPP 823
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 150/362 (41%), Gaps = 45/362 (12%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
T+S+L+ F + +++ + G D+ + L+ L + + A F K
Sbjct: 428 TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR-FSVK 486
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
+ ++ +N +++GWC L EA +V++ + +PD+ T+ T +
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 271 XXXXXXXFRGMWNEGCN-------------CK--------------------PDVVICNC 297
F M+ G CK D+ +CN
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 606
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRM---EKVYELVEDME 354
+I L R+ +A + F ++ E EP++ TYN++I C +RR+ E+++EL+
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL---- 662
Query: 355 RKKGSCMPNAVTYSCLLNSLKGPEEVPGVLER---MERNGCSLSDDIYNLVLRLYMKWDN 411
K PN VT + L++ L ++ G + M G + Y ++ + K +
Sbjct: 663 -KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 721
Query: 412 QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKL 471
+G K ++EM+ G P SY+I+I G + G++ +A F + ++ + +
Sbjct: 722 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAI 781
Query: 472 VI 473
+I
Sbjct: 782 LI 783
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 153/349 (43%), Gaps = 15/349 (4%)
Query: 120 ILDIL---GKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTRE 176
+LD L G++++ + H++ E R G+V+ + + + + ++E A +
Sbjct: 223 VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNK----VLKGLSVDQIEVASRLLSLVL 278
Query: 177 QFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNA 236
G ++ F TL+ C+ ++ A LF + + D+ ++ +++G+ G
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR-GIEPDLIAYSTLIDGYFKAGML 337
Query: 237 HEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICN 296
+++ + + D+ +++ I ++ M +G + P+VV
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS--PNVVTYT 395
Query: 297 CIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
+I LC R+ EA ++ + +RG EP++ TY+SLI CK + + L EDM
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM--I 453
Query: 357 KGSCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERNGCSLSDDIYNLVLRLYMKWDNQD 413
K P+ V Y L++ L + + +M L+ ++N ++ + + + D
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 414 GLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
K + M G PD ++T ++ G++++A+ F M G+
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 150/366 (40%), Gaps = 43/366 (11%)
Query: 134 HQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMW 193
H++F + H+ ++ FS+ + + + + A ++ G+ ++ + L+
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 194 LCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRP 253
LC+ + +A ++ + + I T++ +++G+C GN +++D++ P
Sbjct: 401 LCQDGRIYEAFGMYGQILKR-GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 254 DLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALE 313
D+ Y + M G + + +VV+ N +ID C R EAL+
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKML--GQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 314 VFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS 373
VF+ M G +P+VAT+ ++++ R+E+ L M K P+A+ Y L+++
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF--KMGLEPDALAYCTLIDA 575
Query: 374 L---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTW----------- 419
P + + M+RN S + N+V+ L K + K +
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 420 -----------------DEMER-------NGCGPDRRSYTIMIHGHYENGKMKDAMRYFR 455
DE ER GP+ + TI+IH +N M A+R F
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 695
Query: 456 EMTSKG 461
M KG
Sbjct: 696 IMAEKG 701
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
K + P + ++ +L K + + ++F M+ + N T+ L+ F+ + +
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 722
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
E + +F ++ G+ + ++ ++ LC+ V++A +FH +A + +L D+ + +
Sbjct: 723 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH-QAIDAKLLPDVVAYAI 781
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
++ G+C +G EA +++ ++ + +PD
Sbjct: 782 LIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 157/362 (43%), Gaps = 48/362 (13%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED-TFSTLLRRFAAAHK 164
K+ + P + N IL + R E+ + E+ GLV + +++ L+R +
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI----GLVPDSVSYNILIRGCSNNGD 342
Query: 165 VEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWN 224
+E A + + G+ + TL+ L +E AE L + RE + D T+N
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIR-EIREKGIVLDSVTYN 401
Query: 225 VILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNE 284
+++NG+C G+A +A + ++M +P FTY + I
Sbjct: 402 ILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIY--------------------- 440
Query: 285 GCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRME 344
LC K + EA E+F+ + +G +P++ N+L+ C I M+
Sbjct: 441 ----------------VLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484
Query: 345 KVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLERMERNGCSLSDDIYNL 401
+ + L+++M+ S P+ VTY+CL+ L G EE ++ M+R G YN
Sbjct: 485 RAFSLLKEMDMM--SINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 542
Query: 402 VLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
++ Y K + DEM G P +Y ++ G +N + + A REM S+G
Sbjct: 543 LISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEG 602
Query: 462 MV 463
+V
Sbjct: 603 IV 604
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 165/379 (43%), Gaps = 19/379 (5%)
Query: 90 HRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMS-HREGLVN 148
+R D++ + SK S P +++ E++ SR + +FDE+ + L
Sbjct: 98 YRLDFQTQCLAIAVISKLSSPKPVTQLLKEVVT-----SRKNSIRNLFDELVLAHDRLET 152
Query: 149 EDT--FSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETL 206
+ T F L+R V+EAI FY ++ G + +L L R +E+A +
Sbjct: 153 KSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENA-WV 211
Query: 207 FHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXX 266
F++ ++ ++ T+N+++N C G +AK + +P + TY T +
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271
Query: 267 XXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPN 326
M ++G +PD+ N I+ +C + R A EV ++MKE G P+
Sbjct: 272 LRGRIEGARLIISEMKSKG--FQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPD 326
Query: 327 VATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGV 383
+YN LI+ +E + ++M ++ +P TY+ L++ L E +
Sbjct: 327 SVSYNILIRGCSNNGDLEMAFAYRDEMVKQ--GMVPTFYTYNTLIHGLFMENKIEAAEIL 384
Query: 384 LERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYE 443
+ + G L YN+++ Y + + DEM +G P + +YT +I+
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCR 444
Query: 444 NGKMKDAMRYFREMTSKGM 462
K ++A F ++ KGM
Sbjct: 445 KNKTREADELFEKVVGKGM 463
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 155/395 (39%), Gaps = 42/395 (10%)
Query: 103 WASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAA 162
+ K + P + CN IL +L +++R E + +M E N TF+ ++
Sbjct: 179 YLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKE 238
Query: 163 HKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIK 221
K+++A E FG+ + + TL+ +E A + K++ FQ D++
Sbjct: 239 GKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ--PDMQ 296
Query: 222 TWNVILNGWCVLGNAHEAKRVWKDI-----------------------MASKCR------ 252
T+N IL+ C G A E R K+I MA R
Sbjct: 297 TYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQ 356
Query: 253 ---PDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVP 309
P +TY T I R + +G D V N +I+ C
Sbjct: 357 GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL--DSVTYNILINGYCQHGDAK 414
Query: 310 EALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSC 369
+A + +M G +P TY SLI LC+ + + EL E + K P+ V +
Sbjct: 415 KAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK--GMKPDLVMMNT 472
Query: 370 LLN---SLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNG 426
L++ ++ + +L+ M+ + D YN ++R + R+ EM+R G
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 532
Query: 427 CGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
PD SY +I G+ + G K A EM S G
Sbjct: 533 IKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLG 567
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 85/208 (40%), Gaps = 41/208 (19%)
Query: 293 VICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVED 352
++ + ++ C + V EA+E F MKE+G P T N ++ L ++ R+E + D
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 353 MER------------------KKG---------------SCMPNAVTYSCLLN--SLKG- 376
M R K+G P VTY+ L+ SL+G
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 377 PEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDG-LRKTWDEMERNGCGPDRRSYT 435
E ++ M+ G YN +L W +G + EM+ G PD SY
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPIL----SWMCNEGRASEVLREMKEIGLVPDSVSYN 331
Query: 436 IMIHGHYENGKMKDAMRYFREMTSKGMV 463
I+I G NG ++ A Y EM +GMV
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMV 359
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 166/372 (44%), Gaps = 26/372 (6%)
Query: 103 WASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV--NEDTFSTLLRRFA 160
+K +Y + VC+ ++ K+ + EL F E + G++ N T++TL+
Sbjct: 160 MTNKNVNYPFDNFVCSAVISGFCKIGK-PELALGFFESAVDSGVLVPNLVTYTTLVSALC 218
Query: 161 AAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRY-KHVEDAETLFHSKAR-EFQLHR 218
KV+E + E G + D + W+ Y K + L + E ++R
Sbjct: 219 QLGKVDEVRDLVRRLEDEGFEFDCVFYSN---WIHGYFKGGALVDALMQDREMVEKGMNR 275
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXF 278
D+ +++++++G GN EA + ++ P+L TY I F
Sbjct: 276 DVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLF 335
Query: 279 RGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLC 338
+ + G + D + +ID +C K + A + DM++RG +P++ TYN++I LC
Sbjct: 336 NRILSVGI--EVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLC 393
Query: 339 KIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERNGCSLS 395
R+ + E+ KG + + +TYS LL+S + + VLE R +
Sbjct: 394 MAGRVSEADEV------SKG-VVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMD 446
Query: 396 DDIYNLVLRLYM---KWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMR 452
+ N++L+ ++ + D L + EM+ PD +Y MI G+ + G++++A+
Sbjct: 447 LVMCNILLKAFLLMGAYGEADALYRAMPEMDLT---PDTATYATMIKGYCKTGQIEEALE 503
Query: 453 YFREMTSKGMVA 464
F E+ + A
Sbjct: 504 MFNELRKSSVSA 515
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 156/386 (40%), Gaps = 41/386 (10%)
Query: 116 VCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTR 175
+CN +L M + E ++ M + + T++T+++ + ++EEA+ MF
Sbjct: 449 MCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL 508
Query: 176 EQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVIL-----NGW 230
+ + + + ++ LC+ K + D T + E L+ DI T +L NG
Sbjct: 509 RKSSVSAAV-CYNRIIDALCK-KGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGG 566
Query: 231 --CVLGNAHEAKRVWKDI--------MASKCRPDLF-----------------TYATFIX 263
+LG + +++ D+ + C+ F T+ + I
Sbjct: 567 DKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTIL 626
Query: 264 XXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGC 323
E DV+ II+ LC + + +AL + K RG
Sbjct: 627 KTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGV 686
Query: 324 EPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE---EV 380
N TYNSLI LC+ + + L + +E +P+ VTY L+++L +
Sbjct: 687 TLNTITYNSLINGLCQQGCLVEALRLFDSLENI--GLVPSEVTYGILIDNLCKEGLFLDA 744
Query: 381 PGVLERMERNGCSLSDDIYNLVLRLYMKW-DNQDGLRKTWDEMERNGCGPDRRSYTIMIH 439
+L+ M G + IYN ++ Y K +D +R +M PD + + MI
Sbjct: 745 EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKM-MGRVTPDAFTVSSMIK 803
Query: 440 GHYENGKMKDAMRYFREMTSKGMVAE 465
G+ + G M++A+ F E K + A+
Sbjct: 804 GYCKKGDMEEALSVFTEFKDKNISAD 829
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 135/397 (34%), Gaps = 73/397 (18%)
Query: 95 KPALVFFNWASKADSYAPTSRVC-NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
+ AL FN K+ + ++ VC N I+D L K + +V E+ + ++ T
Sbjct: 499 EEALEMFNELRKS---SVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSR 555
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVE------------ 201
TLL A + + + Y EQ D+ L ++ LC+ E
Sbjct: 556 TLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRK 615
Query: 202 ---------------------DAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAK 240
DA L + D+ + +I+NG C G +A
Sbjct: 616 GLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKAL 675
Query: 241 RVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIID 300
+ + + TY + I F + N G P V +ID
Sbjct: 676 NLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGL--VPSEVTYGILID 733
Query: 301 ALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSC 360
LC + +A ++ M +G PN+ YNS++ CK+ + E +V + G
Sbjct: 734 NLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVS--RKMMGRV 791
Query: 361 MPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWD 420
P+A T S ++ KG Y K + + +
Sbjct: 792 TPDAFTVSSMI---KG-----------------------------YCKKGDMEEALSVFT 819
Query: 421 EMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
E + D + +I G G+M++A REM
Sbjct: 820 EFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 149/386 (38%), Gaps = 44/386 (11%)
Query: 124 LGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLD 183
L KM + EE +F+ + V+E + TL+ + A SM EQ G+
Sbjct: 322 LCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPS 381
Query: 184 LDAFRTLLMWLCRYKHVEDAE--------------TLFHSKAR---------------EF 214
+ + T++ LC V +A+ TL S + E
Sbjct: 382 ILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEA 441
Query: 215 QLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXX 274
++ D+ N++L + ++G EA +++ + PD TYAT I
Sbjct: 442 KIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEA 501
Query: 275 XXXFRGMWNEGCNCKPDVVIC-NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSL 333
M+NE +C N IIDALC K + A EV ++ E+G ++ T +L
Sbjct: 502 LE----MFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTL 557
Query: 334 IKHLCKIRRMEKVYELVEDMERKKGSC----MPNAVTYSCLLNSLKGPEEVPGVLERMER 389
+ + + + LV +E+ + +A+ C S + EV + M R
Sbjct: 558 LHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMI---MRR 614
Query: 390 NGCSLSDDIYNLVLR-LYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMK 448
G +++ + +L+ L + D + E D YTI+I+G + G +
Sbjct: 615 KGLTVT--FPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLV 672
Query: 449 DAMRYFREMTSKGMVAEPRTEKLVIS 474
A+ S+G+ T +I+
Sbjct: 673 KALNLCSFAKSRGVTLNTITYNSLIN 698
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 153/334 (45%), Gaps = 16/334 (4%)
Query: 138 DEMSHREGLV------NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLL 191
D SH E LV N + LL A+++++AI + G+ D A+ L+
Sbjct: 89 DSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLV 148
Query: 192 MWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKC 251
LC+ +V A L K + + T+N ++ G C+LG+ +++ + + +M
Sbjct: 149 NQLCKRGNVGYAMQLVE-KMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL 207
Query: 252 RPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEA 311
P+ FTY+ + + +G +P++V N ++ C + R +A
Sbjct: 208 APNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGG--EPNLVSYNVLLTGFCKEGRTDDA 265
Query: 312 LEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLL 371
+ +F+++ +G + NV +YN L++ LC R E+ L+ +M+ G P+ VTY+ L+
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD--GGDRAPSVVTYNILI 323
Query: 372 NSLK---GPEEVPGVLERMERNGCS--LSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNG 426
NSL E+ VL+ M + ++ YN V+ K D + K DEM
Sbjct: 324 NSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRR 383
Query: 427 CGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
C P+ +Y + N K+++A + +++K
Sbjct: 384 CKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNK 417
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
KP+V ++ LC R+ +A+ V + M G P+ + Y L+ LCK + +
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ 162
Query: 349 LVEDMERKKGSCMPNAVTYS------CLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLV 402
LVE ME N VTY+ C+L SL + +ER+ + G + + Y+ +
Sbjct: 163 LVEKMEDHGYP--SNTVTYNALVRGLCMLGSLNQSLQF---VERLMQKGLAPNAFTYSFL 217
Query: 403 LRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
L K D K DE+ G P+ SY +++ G + G+ DAM FRE+ +KG
Sbjct: 218 LEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGF 277
Query: 463 VA 464
A
Sbjct: 278 KA 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 141/333 (42%), Gaps = 20/333 (6%)
Query: 135 QVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWL 194
Q+ ++M N T++ L+R + +++ Q GL + + LL
Sbjct: 162 QLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAA 221
Query: 195 CRYKHVEDAETLFHS---KAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKC 251
+ + ++A L K E ++ ++NV+L G+C G +A +++++ A
Sbjct: 222 YKERGTDEAVKLLDEIIVKGGE----PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGF 277
Query: 252 RPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEA 311
+ ++ +Y + M +G + P VV N +I++L F R +A
Sbjct: 278 KANVVSYNILLRCLCCDGRWEEANSLLAEM--DGGDRAPSVVTYNILINSLAFHGRTEQA 335
Query: 312 LEVFQDMKERGCEPNVA--TYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYS- 368
L+V ++M + + V +YN +I LCK +++ V + +++M ++ C PN TY+
Sbjct: 336 LQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRR--CKPNEGTYNA 393
Query: 369 ----CLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMER 424
C NS +E +++ + + D Y V+ + N + EM R
Sbjct: 394 IGSLCEHNS--KVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTR 451
Query: 425 NGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
G PD +Y+ +I G G AM M
Sbjct: 452 CGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIM 484
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 123/340 (36%), Gaps = 72/340 (21%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
AP + + +L+ K +E ++ DE+ + G N +++ LL F + ++A++
Sbjct: 208 APNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMA 267
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETL------------------------ 206
+F G ++ ++ LL LC E+A +L
Sbjct: 268 LFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLA 327
Query: 207 FHSKARE------------FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
FH + + Q ++N ++ C G + +++ +C+P+
Sbjct: 328 FHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPN 387
Query: 255 LFTYATFIXXXXXXXXXXXXXXXFRGMWNEG----------------------------- 285
TY + + N+
Sbjct: 388 EGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLY 447
Query: 286 ----CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKE-RGCEPNVATYNSLIKHLCKI 340
C PD + +I LC + A+EV M+E C+P V +N++I LCKI
Sbjct: 448 EMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKI 507
Query: 341 RRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEV 380
RR + E+ E M KK MPN TY+ L+ + +E+
Sbjct: 508 RRTDLAMEVFEMMVEKKR--MPNETTYAILVEGIAHEDEL 545
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 101/252 (40%), Gaps = 46/252 (18%)
Query: 107 ADSYAPT-SRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
A SY P +R+C E + + + + DEM +R NE T++ + KV
Sbjct: 353 ATSYNPVIARLCKE--------GKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKV 404
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
+EA + + D +++++ LCR + A L + R D T++
Sbjct: 405 QEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTR-CGFDPDAHTYSA 463
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
++ G C+ G +FT A + + E
Sbjct: 464 LIRGLCLEG--------------------MFTGAMEVL----------------SIMEES 487
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
NCKP V N +I LC +R A+EVF+ M E+ PN TY L++ + +E
Sbjct: 488 ENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELEL 547
Query: 346 VYELVEDMERKK 357
E+++++ +K
Sbjct: 548 AKEVLDELRLRK 559
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 159/373 (42%), Gaps = 13/373 (3%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + N I++ K F + V M + N+ T++ L+ K+ +A +
Sbjct: 257 PEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKL 316
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F + G++ D+ + +L+ W CR +++ A LF + E L T+ +++G C
Sbjct: 317 FDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFD-ELTEKGLSPSSYTYGALIDGVC 375
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
+G A+ + ++ + + T I + M +G + D
Sbjct: 376 KVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGF--QAD 433
Query: 292 VVICNCIIDALCFK--KRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
V CN I A CF KR EA + M E G + + +Y +LI CK +E+ L
Sbjct: 434 VFTCNTI--ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSL--KGP-EEVPGVLERMERNGCSLSDDIYNLVLRLY 406
+M K PNA+TY+ ++ + +G +E + ME NG Y ++
Sbjct: 492 FVEMSSK--GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGE 549
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEP 466
DN D + + EM G + +YT+MI G + GK +A + EM KG +
Sbjct: 550 CIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDN 609
Query: 467 RT-EKLVISMNSP 478
+ L+ SM+SP
Sbjct: 610 KVYTALIGSMHSP 622
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 129/289 (44%), Gaps = 8/289 (2%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED 150
+ + K A + F+ ++ +P+S ++D + K+ + +EM + + +
Sbjct: 342 KGNMKRAFLLFDELTEK-GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQV 400
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAET-LFHS 209
F+TL+ + V+EA ++ EQ G D+ T+ R K ++A+ LF
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLF-- 458
Query: 210 KAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXX 269
+ E + ++ +++ +C GN EAKR++ ++ + +P+ TY I
Sbjct: 459 RMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Query: 270 XXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVAT 329
M G + PD +I C V EA+ +F +M +G + N T
Sbjct: 519 KIKEARKLRANMEANGMD--PDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT 576
Query: 330 YNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE 378
Y +I L K + ++ + L ++M+R KG + N V Y+ L+ S+ PE
Sbjct: 577 YTVMISGLSKAGKSDEAFGLYDEMKR-KGYTIDNKV-YTALIGSMHSPE 623
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 147/373 (39%), Gaps = 47/373 (12%)
Query: 130 FEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRT 189
FEE +VFD M + ++E + L +++ + +F G+ + + +
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTI 229
Query: 190 LLMWLCRYKHVEDAETLFHSKAREFQLHRDIK----TWNVILNGWCVLGNAHEAKRVWKD 245
++ LCR VE ++ L +EF + + IK T+N I+N + + + V K
Sbjct: 230 VVEGLCRRGEVEKSKKLI----KEFSV-KGIKPEAYTYNTIINAYVKQRDFSGVEGVLKV 284
Query: 246 IMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFK 305
+ + TY + F M G + DV + +I C K
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG--IESDVHVYTSLISWNCRK 342
Query: 306 KRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK--------- 356
+ A +F ++ E+G P+ TY +LI +CK+ M L+ +M+ K
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 357 ----KGSCMPNAV-----------------------TYSCLLNSLKGPEEVPGVLERMER 389
G C V T + N LK +E L RM
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 390 NGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKD 449
G LS Y ++ +Y K N + ++ + EM G P+ +Y +MI+ + + GK+K+
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 450 AMRYFREMTSKGM 462
A + M + GM
Sbjct: 523 ARKLRANMEANGM 535
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 150/364 (41%), Gaps = 57/364 (15%)
Query: 155 LLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREF 214
+ R + EE + +F + GL +D + L+ + + ++ +F + +
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFR-RMVDS 218
Query: 215 QLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXX 274
+ + + +++ G C G ++K++ K+ +P+ +TY T I
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 275 XXXFRGMWNEGCNCKPDVVICNCIIDALCFK-----KRVPEALEVFQDMKERGCEPNVAT 329
+ M K D V+ N + L + ++ +A ++F +M+ERG E +V
Sbjct: 279 EGVLKVM-------KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHV 331
Query: 330 YNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL-----KGPEEVPGVL 384
Y SLI C+ M++ + L +++ K S P++ TY L++ + G E+ ++
Sbjct: 332 YTSLISWNCRKGNMKRAFLLFDELTEKGLS--PSSYTYGALIDGVCKVGEMGAAEI--LM 387
Query: 385 ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPD-------------- 430
M+ G +++ ++N ++ Y + D +D ME+ G D
Sbjct: 388 NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL 447
Query: 431 ---------------------RRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTE 469
SYT +I + + G +++A R F EM+SKG+ T
Sbjct: 448 KRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITY 507
Query: 470 KLVI 473
++I
Sbjct: 508 NVMI 511
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 175/395 (44%), Gaps = 43/395 (10%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N +LD L K E+ QVF++M R +E T++ ++R K +EA+ +F
Sbjct: 242 NMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMIT 298
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN-----GWCV 232
GL L++ + TL+ L + K V+ A +F S+ E + T++++LN G V
Sbjct: 299 EGLTLNVVGYNTLMQVLAKGKMVDKAIQVF-SRMVETGCRPNEYTYSLLLNLLVAEGQLV 357
Query: 233 ---------------------------LGNAHEAKRVWKDIMASKCRPDLFTYATFIXXX 265
LG+ EA R++ D+ + + + +Y + +
Sbjct: 358 RLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESL 417
Query: 266 XXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEP 325
+ +G D ++ N + AL K++ ++F+ MK+ G P
Sbjct: 418 CGAGKTIEAIEMLSKIHEKG--VVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSP 475
Query: 326 NVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGV-- 383
++ TYN LI ++ +++ + E++ER C P+ ++Y+ L+N L +V
Sbjct: 476 DIFTYNILIASFGRVGEVDEAINIFEELER--SDCKPDIISYNSLINCLGKNGDVDEAHV 533
Query: 384 -LERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHY 442
+ M+ G + Y+ ++ + K + + ++EM GC P+ +Y I++
Sbjct: 534 RFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLE 593
Query: 443 ENGKMKDAMRYFREMTSKGMVAEPRTEKLVISMNS 477
+NG+ +A+ + +M +G+ + T ++ + S
Sbjct: 594 KNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQS 628
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 297 CIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
C++ A + +A +V+ +++ G + ++ YN L+ L K EK ++ EDM K
Sbjct: 208 CLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDM--K 262
Query: 357 KGSCMPNAVTYSCLLNS---LKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQD 413
K C + TY+ ++ + + +E G+ M G +L+ YN ++++ K D
Sbjct: 263 KRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVD 322
Query: 414 GLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKM 447
+ + M GC P+ +Y+++++ G++
Sbjct: 323 KAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQL 356
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 127/286 (44%), Gaps = 12/286 (4%)
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
+F +++ ++C+ V+ AE + HS R F D+ ++N +++G C G+ A V +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPR-FGCEPDVISYNSLIDGHCRNGDIRSASLVLES 116
Query: 246 IMASK---CRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDAL 302
+ AS C+PD+ ++ + M C C P+VV + ID
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK--C-CSPNVVTYSTWIDTF 173
Query: 303 CFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMP 362
C + AL+ F MK PNV T+ LI CK +E L ++M R + S
Sbjct: 174 CKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSL-- 231
Query: 363 NAVTYSCLLNSL--KGP-EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTW 419
N VTY+ L++ KG + + RM + + +Y ++ + + + D K
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 420 DEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
+M G D +Y ++I G NGK+K+A +M +V +
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD 337
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 146/326 (44%), Gaps = 12/326 (3%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS- 209
+F++++ +V+ A + ++ +FG + D+ ++ +L+ CR + A + S
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 210 -KAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXX 268
+ F DI ++N + NG+ + E V+ +M C P++ TY+T+I
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEV-FVYMGVMLKCCSPNVVTYSTWIDTFCKS 176
Query: 269 XXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVA 328
F M + + P+VV C+ID C + A+ ++++M+ NV
Sbjct: 177 GELQLALKSFHSMKRDALS--PNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVV 234
Query: 329 TYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLE 385
TY +LI CK M++ E+ M + PN++ Y+ +++ + L
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVE--PNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 386 RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENG 445
+M G L Y +++ + ++ME++ PD +T M++ ++++G
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 446 KMKDAMRYFREMTSKGMVAEPRTEKL 471
+MK A+ + ++ +G EP L
Sbjct: 353 RMKAAVNMYHKLIERGF--EPDVVAL 376
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 142/320 (44%), Gaps = 11/320 (3%)
Query: 148 NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF 207
N T+ST + F + +++ A+ F++ ++ L ++ F L+ C+ +E A +L+
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 208 HSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXX 267
+ R ++ ++ T+ +++G+C G A+ ++ ++ + P+ Y T I
Sbjct: 222 K-EMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 268 XXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
M N+G + D+ II LC ++ EA E+ +DM++ P++
Sbjct: 281 RGDSDNAMKFLAKMLNQGM--RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDM 338
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL--KGPEEVPGVLE 385
+ +++ K RM+ + + + P+ V S +++ + G V
Sbjct: 339 VIFTTMMNAYFKSGRMKAAVNMYHKLIERGFE--PDVVALSTMIDGIAKNGQLHEAIVYF 396
Query: 386 RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENG 445
+E+ +D +Y +++ K + + + + ++ G PD+ YT I G + G
Sbjct: 397 CIEKA----NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQG 452
Query: 446 KMKDAMRYFREMTSKGMVAE 465
+ DA + M +G++ +
Sbjct: 453 NLVDAFKLKTRMVQEGLLLD 472
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 104/230 (45%), Gaps = 10/230 (4%)
Query: 128 SRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAF 187
+ +E ++ ++M + + + F+T++ + + +++ A++M++ + G + D+ A
Sbjct: 317 GKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVAL 376
Query: 188 RTLLMWLCRYKHVEDAETLF-HSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDI 246
T++ + + + +A F KA + + V+++ C G+ E +R++ I
Sbjct: 377 STMIDGIAKNGQLHEAIVYFCIEKANDVM-------YTVLIDALCKEGDFIEVERLFSKI 429
Query: 247 MASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKK 306
+ PD F Y ++I M EG D++ +I L K
Sbjct: 430 SEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGL--LLDLLAYTTLIYGLASKG 487
Query: 307 RVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
+ EA +VF +M G P+ A ++ LI+ K M +L+ DM+R+
Sbjct: 488 LMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRR 537
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 165/381 (43%), Gaps = 11/381 (2%)
Query: 88 RRHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV 147
+R R D + L FN AS+ + + + +LD L + +F + + +M +
Sbjct: 64 KRER-DPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRF 122
Query: 148 NEDTFSTLLRRFAAAHKVEEAISMFYTREQFG-LDLDLDAFRTLLMWLCRYKHVEDAETL 206
E F L+R F+ + ++ + MF + + L+A T L L V + L
Sbjct: 123 QESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKL 182
Query: 207 FHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCR-PDLFTYATFIXXX 265
L + +N+++ C G+ + A V +++ S P+ TY+T +
Sbjct: 183 LLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCL 242
Query: 266 XXXXXXXXXXXXFRGMWN-EGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCE 324
F M + EG + PD V N +I+ C V A ++ MK+ GC
Sbjct: 243 FAHSRSKEAVELFEDMISKEGIS--PDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCN 300
Query: 325 PNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVP 381
PNV Y++L+ CK+ ++++ + + E KK + V Y+ L+N +E
Sbjct: 301 PNVYNYSALMNGFCKVGKIQEAKQTFD--EVKKTGLKLDTVGYTTLMNCFCRNGETDEAM 358
Query: 382 GVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGH 441
+L M+ + C YN++LR + + D+ G ++ SY I+++
Sbjct: 359 KLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNAL 418
Query: 442 YENGKMKDAMRYFREMTSKGM 462
NG+++ A+++ M+ +G+
Sbjct: 419 CCNGELEKAVKFLSVMSERGI 439
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 4/229 (1%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED-TFSTLLRRFAAAHKVEEAIS 170
P S + ++D L SR +E ++F++M +EG+ + TF+ ++ F A +VE A
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ ++ G + ++ + L+ C+ +++A+ F + ++ L D + ++N +
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTF-DEVKKTGLKLDTVGYTTLMNCF 348
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C G EA ++ ++ AS+CR D TY + +EG +
Sbjct: 349 CRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNK 408
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCK 339
I++ALC + +A++ M ERG P+ AT+N L+ LC+
Sbjct: 409 GSY--RIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCE 455
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 96/189 (50%), Gaps = 5/189 (2%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCE-PNVATYNSLIKHLCKIRRMEKVY 347
+P+ I N ++ C + A V ++MK G PN TY++L+ L R ++
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 348 ELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEV---PGVLERMERNGCSLSDDIYNLVLR 404
EL EDM K+G P+ VT++ ++N EV +L+ M++NGC+ + Y+ ++
Sbjct: 253 ELFEDMISKEG-ISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 405 LYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVA 464
+ K ++T+DE+++ G D YT +++ NG+ +AM+ EM + A
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 465 EPRTEKLVI 473
+ T +++
Sbjct: 372 DTLTYNVIL 380
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 151/377 (40%), Gaps = 38/377 (10%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
+L FFNWA SY PTS E+ L ++E + ++ +M ++ +T ++
Sbjct: 94 SLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFII 153
Query: 157 RRFAAAHKVEEAISMFY-TREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ 215
++ V++A+ +F + G +D + +LL LC K A L R+
Sbjct: 154 EQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK-G 212
Query: 216 LHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXX 275
L D +T+ +++NGWC G EA+ ++ P I
Sbjct: 213 LKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAK 272
Query: 276 XXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIK 335
M G PD+ N +I+A+ V +E++ + G ++ TY +LI
Sbjct: 273 EMVSKMTKGG--FVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIP 330
Query: 336 HLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLS 395
+ KI ++++ + L+ + P SL P +++ M RNG +
Sbjct: 331 AVSKIGKIDEAFRLLNNCVEDGHKPFP----------SLYAP-----IIKGMCRNG--MF 373
Query: 396 DDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFR 455
DD ++ + +M+ P+R YT++I GK DA Y
Sbjct: 374 DDAFSF-----------------FSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLV 416
Query: 456 EMTSKGMVAEPRTEKLV 472
EMT G+V R +V
Sbjct: 417 EMTEMGLVPISRCFDMV 433
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%)
Query: 391 GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDA 450
GC + D+YN +L G M R G PD+R+Y I+++G GKMK+A
Sbjct: 177 GCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEA 236
Query: 451 MRYFREMTSKGMVAEPRTEKLVI 473
+ EM+ +G R L+I
Sbjct: 237 QEFLDEMSRRGFNPPARGRDLLI 259
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 159/376 (42%), Gaps = 13/376 (3%)
Query: 93 DWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED-- 150
+ AL +F K P + N I+ L K+ + + +F+ M + D
Sbjct: 263 QYSKALSYFELM-KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 321
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
TF++++ ++ ++E ++F GL ++ ++ L+ + A ++
Sbjct: 322 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL-GD 380
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
++ + D+ ++ +LN + +AK V+ + + +P++ TY I
Sbjct: 381 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 440
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
FR M +G KP+VV ++ A K+ V + RG N A Y
Sbjct: 441 LAEAVEIFRQMEQDGI--KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 498
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL----KGPEEVPGVLER 386
NS I +EK L + M +KK ++VT++ L++ K PE + L+
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKK--VKADSVTFTILISGSCRMSKYPEAI-SYLKE 555
Query: 387 MERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGK 446
ME L+ ++Y+ VL Y K +++M+ GC PD +YT M+H + + K
Sbjct: 556 MEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEK 615
Query: 447 MKDAMRYFREMTSKGM 462
A F EM + G+
Sbjct: 616 WGKACELFLEMEANGI 631
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 150/346 (43%), Gaps = 13/346 (3%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMF-YTRE 176
+E++D L ++R+EE+ V + R N F L+R + +E +++F + +
Sbjct: 79 SEVVDRLMALNRWEEVDGVLNSWVGRFARKN---FPVLIRELSRRGCIELCVNVFKWMKI 135
Query: 177 QFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNA 236
Q D + ++ R+ V+ A LF + +++ D +T++ ++N G
Sbjct: 136 QKNYCARNDIYNMMIRLHARHNWVDQARGLFF-EMQKWSCKPDAETYDALINAHGRAGQW 194
Query: 237 HEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICN 296
A + D++ + P TY I + M + G PD+V N
Sbjct: 195 RWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVG--PDLVTHN 252
Query: 297 CIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
++ A ++ +AL F+ MK P+ T+N +I L K+ + + +L M K
Sbjct: 253 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK 312
Query: 357 KGSCMPNAVTYSCLLN--SLKGP-EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQD 413
+ C P+ VT++ +++ S+KG E V E M G + YN ++ Y
Sbjct: 313 RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSG 372
Query: 414 GLRKTWDEMERNGCGPDRRSYTIMIHGHYEN---GKMKDAMRYFRE 456
++++NG PD SYT +++ + + GK K+ R+
Sbjct: 373 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 418
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 154/365 (42%), Gaps = 6/365 (1%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N ++D G E ++F +M N + TLL + + K ++
Sbjct: 423 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 482
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ G++L+ A+ + + +E A L+ S R+ ++ D T+ ++++G C
Sbjct: 483 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQS-MRKKKVKADSVTFTILISGSC 541
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
+ EA K++ Y++ + F M GC +PD
Sbjct: 542 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGC--EPD 599
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
V+ ++ A ++ +A E+F +M+ G EP+ ++L++ K + V+ L+
Sbjct: 600 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLM- 658
Query: 352 DMERKKGSCMPNAVTYSCL--LNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKW 409
D+ R+K AV + N+L+ + +++ M+ SLS + N +L L+ K
Sbjct: 659 DLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKS 718
Query: 410 DNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTE 469
+ + K + ++ +G G + ++Y I++ G + + M+ G+ +
Sbjct: 719 GKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMY 778
Query: 470 KLVIS 474
+ +IS
Sbjct: 779 RDIIS 783
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 159/400 (39%), Gaps = 68/400 (17%)
Query: 90 HRSDWKPALVFFNWASKADSYA--PTSRVCNEILDILGKMSRFEELHQV----------- 136
RSD + FF W K SY PT + N++L ++ + H V
Sbjct: 79 QRSDNDICVRFFMWVCKHSSYCFDPTQK--NQLLKLIVSSGLYRVAHAVIVALIKECSRC 136
Query: 137 ----------FDEMSHREGL-VNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLD 185
FDE+ G +N +S+LL A A + E G + +
Sbjct: 137 EKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMI 196
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
+RT++ LC+ + E AE +F SK + D +L G+C N +A +V+ D
Sbjct: 197 DYRTIVNALCKNGYTEAAE-MFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVF-D 254
Query: 246 IMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFK 305
+M+ + C P+ V + +I LC
Sbjct: 255 VMSKEV-----------------------------------TCAPNSVSYSILIHGLCEV 279
Query: 306 KRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAV 365
R+ EA + M E+GC+P+ TY LIK LC ++K + L ++M + C PN
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPR--GCKPNVH 337
Query: 366 TYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEM 422
TY+ L++ L EE GV +M ++ S YN ++ Y K + M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 423 ERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
E+ C P+ R++ ++ G GK A+ + M G+
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/440 (19%), Positives = 176/440 (40%), Gaps = 74/440 (16%)
Query: 93 DWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTF 152
+ + AL F+ SK + AP S + ++ L ++ R EE + D+M + + T+
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 153 STLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAR 212
+ L++ +++A ++F G ++ + L+ LCR +E+A + +
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 213 EFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXX 272
+ ++ + T+N ++NG+C G A + + C+P++ T+ +
Sbjct: 365 D-RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423
Query: 273 XXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYN- 331
+ M + G + PD+V N +ID LC + + A ++ M EP+ T+
Sbjct: 424 KAVHLLKRMLDNGLS--PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 332 ----------------------------------SLIKHLCKIRRMEKVYELVE------ 351
+LI +CK+ + ++E
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 352 ------------DMERK---------------KGSCMPNAVTYSCLLNSLKGPEEVPG-- 382
DM K K +P+ VTY+ L++ L ++ G
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601
Query: 383 -VLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGH 441
+LE M+ +GC + Y +++ ++ + K M+ +G P+ +YT+M+ G+
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 442 YENGKMKDAMRYFREMTSKG 461
NGK+ A+ R M +G
Sbjct: 662 VNNGKLDRALETVRAMVERG 681
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 147/327 (44%), Gaps = 9/327 (2%)
Query: 140 MSHREGL-VNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYK 198
M+ GL T +++ A + + EA ++F Q G+ A+ LL +
Sbjct: 294 MAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTG 353
Query: 199 HVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTY 258
++DAE++ S+ + + D T++++++ + G A+ V K++ A +P+ F +
Sbjct: 354 PLKDAESMV-SEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVF 412
Query: 259 ATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDM 318
+ + + M + G KPD N +ID + A+ F M
Sbjct: 413 SRLLAGFRDRGEWQKTFQVLKEMKSIGV--KPDRQFYNVVIDTFGKFNCLDHAMTTFDRM 470
Query: 319 KERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE 378
G EP+ T+N+LI CK R E+ E MER+ C+P A TY+ ++NS E
Sbjct: 471 LSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR--GCLPCATTYNIMINSYGDQE 528
Query: 379 ---EVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYT 435
++ +L +M+ G + + ++ +Y K + + +EM+ G P Y
Sbjct: 529 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 588
Query: 436 IMIHGHYENGKMKDAMRYFREMTSKGM 462
+I+ + + G + A+ FR MTS G+
Sbjct: 589 ALINAYAQRGLSEQAVNAFRVMTSDGL 615
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 150/356 (42%), Gaps = 10/356 (2%)
Query: 123 ILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDL 182
++ + R E+L++ F +S ++ L T++ L+ A + +E+A+++ Q G
Sbjct: 173 LIHALGRSEKLYEAF-LLSQKQTL-TPLTYNALIGACARNNDIEKALNLIAKMRQDGYQS 230
Query: 183 DLDAFRTLLMWLCRYKHVEDAETL-FHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKR 241
D + ++ L R ++ L + + +L D++ N I+ G+ G+ +A +
Sbjct: 231 DFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQ 290
Query: 242 VWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDA 301
+ A+ T + I F + G KP N ++
Sbjct: 291 LLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGI--KPRTRAYNALLKG 348
Query: 302 LCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCM 361
+ +A + +M++RG P+ TY+ LI R E ++++ME G
Sbjct: 349 YVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME--AGDVQ 406
Query: 362 PNAVTYSCLLNSLKGPEE---VPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKT 418
PN+ +S LL + E VL+ M+ G YN+V+ + K++ D T
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 419 WDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+D M G PDR ++ +I H ++G+ A F M +G + T ++I+
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 139/349 (39%), Gaps = 18/349 (5%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
+P + ++D R+E V EM + N FS LL F + ++
Sbjct: 371 SPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQ 430
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ + G+ D + ++ ++ ++ A T F E + D TWN +++
Sbjct: 431 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE-GIEPDRVTWNTLIDCH 489
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C G A+ +++ + C P TY I M ++G P
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI--LP 547
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
+VV ++D R +A+E ++MK G +P+ YN+LI + E+
Sbjct: 548 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607
Query: 351 EDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYM 407
M P+ + + L+N+ + E VL+ M+ NG Y +++ +
Sbjct: 608 RVM--TSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALI 665
Query: 408 KWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFRE 456
+ D + ++EM +GC PDR++ ++ ++ A+RY ++
Sbjct: 666 RVDKFQKVPVVYEEMIMSGCKPDRKARSM----------LRSALRYMKQ 704
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 130/311 (41%), Gaps = 27/311 (8%)
Query: 94 WKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
W+ A + D P S V + +L +++ QV EM + ++
Sbjct: 390 WESARIVLKEMEAGD-VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYN 448
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
++ F + ++ A++ F G++ D + TL+ C++ AE +F + R
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 508
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXX 273
L T+N+++N + + KR+ + + P++ T+ T +
Sbjct: 509 GCLPC-ATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS----- 562
Query: 274 XXXXFRGMWNEGCNC---------KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCE 324
G +N+ C KP + N +I+A + +A+ F+ M G +
Sbjct: 563 ------GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK 616
Query: 325 PNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVP 381
P++ NSLI + RR + + +++ M K+ P+ VTY+ L+ +L ++VP
Sbjct: 617 PSLLALNSLINAFGEDRRDAEAFAVLQYM--KENGVKPDVVTYTTLMKALIRVDKFQKVP 674
Query: 382 GVLERMERNGC 392
V E M +GC
Sbjct: 675 VVYEEMIMSGC 685
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 119/287 (41%), Gaps = 6/287 (2%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R R +W+ K+ P + N ++D GK + + FD M +
Sbjct: 420 RDRGEWQKTFQVLK-EMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD 478
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
T++TL+ + A MF E+ G + ++ + +D + L
Sbjct: 479 RVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLL- 537
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXX 268
K + + ++ T +++ + G ++A +++ + +P Y I
Sbjct: 538 GKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQR 597
Query: 269 XXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVA 328
FR M ++G KP ++ N +I+A +R EA V Q MKE G +P+V
Sbjct: 598 GLSEQAVNAFRVMTSDGL--KPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVV 655
Query: 329 TYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLK 375
TY +L+K L ++ + +KV + E+M C P+ S L ++L+
Sbjct: 656 TYTTLMKALIRVDKFQKVPVVYEEM--IMSGCKPDRKARSMLRSALR 700
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 144/365 (39%), Gaps = 13/365 (3%)
Query: 88 RRHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV 147
R + L FF+W K + Y S N + + G F+++ +F EM + L+
Sbjct: 652 RHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLI 711
Query: 148 NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYK--HVEDAET 205
+DT++ ++ ++ AI F + GL F+ L+ LC K +VE+A
Sbjct: 712 TQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATR 771
Query: 206 LFHSKARE-FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXX 264
F R F R++ L C +GN +AK D + P Y+ +I
Sbjct: 772 TFREMIRSGFVPDREL--VQDYLGCLCEVGNTKDAKSCL-DSLGKIGFPVTVAYSIYIRA 828
Query: 265 XXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCE 324
EG D I+ L + + +AL+ MKE G +
Sbjct: 829 LCRIGKLEEALSELASF--EGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTK 886
Query: 325 PNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYS---CLLNSLKGPEEVP 381
P V Y SLI + K +++EKV E + ME + SC P+ VTY+ C SL EE
Sbjct: 887 PGVHVYTSLIVYFFKEKQLEKVLETCQKMEGE--SCEPSVVTYTAMICGYMSLGKVEEAW 944
Query: 382 GVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGH 441
ME G S Y+ + + + K EM G P ++ + +G
Sbjct: 945 NAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGL 1004
Query: 442 YENGK 446
GK
Sbjct: 1005 NREGK 1009
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 146/377 (38%), Gaps = 60/377 (15%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
A+ FFNW + D ++ + N +L I G+ + + ++ EM + T++ L+
Sbjct: 172 AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILI 231
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQL 216
+ A K+ + + +F + G +LD A
Sbjct: 232 SVYGKAKKIGKGLLVFEKMRKSGFELDATA------------------------------ 261
Query: 217 HRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXX 276
+N+++ C+ G A +K++M L TY +
Sbjct: 262 ------YNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQS 315
Query: 277 XFRGMWNEGCNCKPDVVICNC--------IIDALCFKKRVPEALEVFQDMKERGCEPNVA 328
M V IC ++ + C ++ EALE+ +++K + +
Sbjct: 316 IADDM----------VRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAK 365
Query: 329 TYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERME 388
+ L+K LC+ RM E+V+ M+R+K + ++ Y +++ +V LE+ E
Sbjct: 366 YFEILVKGLCRANRMVDALEIVDIMKRRK---LDDSNVYGIIISGYLRQNDVSKALEQFE 422
Query: 389 ---RNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENG 445
++G Y +++ K + ++EM NG PD + T ++ GH
Sbjct: 423 VIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQN 482
Query: 446 KMKDAMRYFREMTSKGM 462
++ +A + F M KG+
Sbjct: 483 RVAEAWKVFSSMEEKGI 499
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 6/239 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
+LD + K + + + + D+M + D F LL+ F + K++EA+ + +
Sbjct: 300 LLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKE 359
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDA-ETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHE 238
+ LD F L+ LCR + DA E + K R+ D + +I++G+ + +
Sbjct: 360 MCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD---DSNVYGIIISGYLRQNDVSK 416
Query: 239 AKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCI 298
A ++ I S P + TY + F M G +PD V +
Sbjct: 417 ALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGI--EPDSVAITAV 474
Query: 299 IDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
+ + RV EA +VF M+E+G +P +Y+ +K LC+ R +++ ++ M K
Sbjct: 475 VAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASK 533
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 102/252 (40%), Gaps = 10/252 (3%)
Query: 222 TWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXX--XXXXXXXXXXXXXFR 279
TW +++ + G + A R +K++ P T+ I FR
Sbjct: 715 TWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFR 774
Query: 280 GMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCK 339
M G PD + + LC +A + + G P Y+ I+ LC+
Sbjct: 775 EMIRSGF--VPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCR 831
Query: 340 IRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLER---MERNGCSLSD 396
I ++E+ + E ++ + + TY +++ L ++ L++ M+ G
Sbjct: 832 IGKLEEALSELASFEGERS--LLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGV 889
Query: 397 DIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFRE 456
+Y ++ + K + + +T +ME C P +YT MI G+ GK+++A FR
Sbjct: 890 HVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRN 949
Query: 457 MTSKGMVAEPRT 468
M +G + +T
Sbjct: 950 MEERGTSPDFKT 961
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 159/376 (42%), Gaps = 13/376 (3%)
Query: 93 DWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED-- 150
+ AL +F K P + N I+ L K+ + + +F+ M + D
Sbjct: 131 QYSKALSYFELM-KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 189
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
TF++++ ++ ++E ++F GL ++ ++ L+ + A ++
Sbjct: 190 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL-GD 248
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
++ + D+ ++ +LN + +AK V+ + + +P++ TY I
Sbjct: 249 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 308
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
FR M +G KP+VV ++ A K+ V + RG N A Y
Sbjct: 309 LAEAVEIFRQMEQDGI--KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 366
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL----KGPEEVPGVLER 386
NS I +EK L + M +KK ++VT++ L++ K PE + L+
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKK--VKADSVTFTILISGSCRMSKYPEAIS-YLKE 423
Query: 387 MERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGK 446
ME L+ ++Y+ VL Y K +++M+ GC PD +YT M+H + + K
Sbjct: 424 MEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEK 483
Query: 447 MKDAMRYFREMTSKGM 462
A F EM + G+
Sbjct: 484 WGKACELFLEMEANGI 499
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 119/278 (42%), Gaps = 9/278 (3%)
Query: 185 DAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWK 244
D + ++ R+ V+ A LF + +++ D +T++ ++N G A +
Sbjct: 12 DIYNMMIRLHARHNWVDQARGLFF-EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 70
Query: 245 DIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCF 304
D++ + P TY I + M + G PD+V N ++ A
Sbjct: 71 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVG--PDLVTHNIVLSAYKS 128
Query: 305 KKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNA 364
++ +AL F+ MK P+ T+N +I L K+ + + +L M K+ C P+
Sbjct: 129 GRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDV 188
Query: 365 VTYSCLLN--SLKGP-EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDE 421
VT++ +++ S+KG E V E M G + YN ++ Y +
Sbjct: 189 VTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGD 248
Query: 422 MERNGCGPDRRSYTIMIHGHYEN---GKMKDAMRYFRE 456
+++NG PD SYT +++ + + GK K+ R+
Sbjct: 249 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 286
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 154/365 (42%), Gaps = 6/365 (1%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N ++D G E ++F +M N + TLL + + K ++
Sbjct: 291 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 350
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ G++L+ A+ + + +E A L+ S R+ ++ D T+ ++++G C
Sbjct: 351 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQS-MRKKKVKADSVTFTILISGSC 409
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
+ EA K++ Y++ + F M GC +PD
Sbjct: 410 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGC--EPD 467
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
V+ ++ A ++ +A E+F +M+ G EP+ ++L++ K + V+ L+
Sbjct: 468 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLM- 526
Query: 352 DMERKKGSCMPNAVTYSCL--LNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKW 409
D+ R+K AV + N+L+ + +++ M+ SLS + N +L L+ K
Sbjct: 527 DLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKS 586
Query: 410 DNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTE 469
+ + K + ++ +G G + ++Y I++ G + + M+ G+ +
Sbjct: 587 GKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMY 646
Query: 470 KLVIS 474
+ +IS
Sbjct: 647 RDIIS 651
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 158/383 (41%), Gaps = 51/383 (13%)
Query: 95 KPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFST 154
+ AL F W +++ T + +D G+ F+ + ++ +S +G+ T +
Sbjct: 124 RAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEI---ISKYKGIAGGKTLES 180
Query: 155 LLRRFAAAHKVEEAISMFYTREQ-FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
+ R A + ++ F E +GL D ++ ++ LC H AE + + A E
Sbjct: 181 AIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANE 240
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXX 273
+ D +++++GWC+ EA R+ ++
Sbjct: 241 --IFPDENICDLLISGWCIAEKLDEATRLAGEMS-------------------------- 272
Query: 274 XXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKR----VPEALEVFQDMKERGCEPNVAT 329
RG + G ++ C C LC KK PE +V +M+ RG N T
Sbjct: 273 -----RGGFEIGTKAYNMMLDCVC---KLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTET 324
Query: 330 YNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEV---PGVLER 386
+N LI +LCKIRR E+ L M + C P+A TY L+ SL + ++++
Sbjct: 325 FNVLINNLCKIRRTEEAMTLFGRM--GEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDK 382
Query: 387 MERNGCS--LSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYEN 444
M+ G L+ Y L++ + + + M+ NGC P ++Y +++ N
Sbjct: 383 MKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCAN 442
Query: 445 GKMKDAMRYFREMTSKGMVAEPR 467
++ A ++E KG+ P+
Sbjct: 443 NQLTRANGLYKEAAKKGIAVSPK 465
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 144/360 (40%), Gaps = 36/360 (10%)
Query: 145 GLVNEDTFSTLLRRFAAAHKVEEAISMF---------------------------YTREQ 177
G V E+ S++LRRF H EEA+ F + + Q
Sbjct: 294 GYVVENV-SSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQ 352
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G D + T++ L R K + L R+ + T+N +++ +
Sbjct: 353 PGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRD-GCKPNTVTYNRLIHSYGRANYLK 411
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
EA V+ + + C PD TY T I ++ M G + PD +
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLS--PDTFTYSV 469
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
II+ L +P A +F +M +GC PN+ T+N +I K R E +L DM+
Sbjct: 470 IINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQ--N 527
Query: 358 GSCMPNAVTYSCLLNSLKG---PEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
P+ VTYS ++ L EE GV M+R + +Y L++ L+ K N D
Sbjct: 528 AGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDK 587
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+ + M + G P+ + ++ +M +A + M + G+ +T L++S
Sbjct: 588 AWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 148/365 (40%), Gaps = 38/365 (10%)
Query: 42 PEHAAGAGAFVQNLLK-FRRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVF 100
P G V+N+ RR K E AL GF ++ ++ AL F
Sbjct: 287 PRQHCNPGYVVENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQ-MDNYANALGF 345
Query: 101 FNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFA 160
F W + + ++ LG+ +F E++++ DEM N T++ L+ +
Sbjct: 346 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYG 405
Query: 161 AAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDI 220
A+ ++EA+++F ++ G + D + TL+ + ++ A ++ + +E L D
Sbjct: 406 RANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQ-RMQEAGLSPDT 464
Query: 221 KTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRG 280
T++VI+N G+ A R++ +++ C P+L T+ I +R
Sbjct: 465 FTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRD 524
Query: 281 MWNEG-----------------C----------------NCKPDVVICNCIIDALCFKKR 307
M N G C N PD + ++D
Sbjct: 525 MQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGN 584
Query: 308 VPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTY 367
V +A + +Q M + G PNV T NSL+ ++ RM + Y L++ M P+ TY
Sbjct: 585 VDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLAL--GLHPSLQTY 642
Query: 368 SCLLN 372
+ LL+
Sbjct: 643 TLLLS 647
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Query: 319 KERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP- 377
++ G + + TY +++ +L + ++ ++ +L+++M R C PN VTY+ L++S
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRD--GCKPNTVTYNRLIHSYGRAN 408
Query: 378 --EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYT 435
+E V +M+ GC Y ++ ++ K D + M+ G PD +Y+
Sbjct: 409 YLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYS 468
Query: 436 IMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISMNS 477
++I+ + G + A R F EM +G T ++I++++
Sbjct: 469 VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHA 510
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 149/315 (47%), Gaps = 12/315 (3%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDA-ETLFHS 209
T S+L+ F ++ +++A+ + E+ G+ D+ L+ LC+ + V A E L
Sbjct: 15 TASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRM 74
Query: 210 KAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXX 269
K R + ++ T++ ++ G C G +A+R ++ + K P++ T++ I
Sbjct: 75 KDR--GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRG 132
Query: 270 XXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVAT 329
++ M + P+V + +I LC RV EA+++ M +GC PNV T
Sbjct: 133 KLSKVDSVYKMMIQMSID--PNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 190
Query: 330 YNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVP---GVLER 386
Y++L K R++ +L++DM ++ N V+ + L+ ++ GV
Sbjct: 191 YSTLANGFFKSSRVDDGIKLLDDMPQR--GVAANTVSCNTLIKGYFQAGKIDLALGVFGY 248
Query: 387 MERNGCSLSDDIYNLVLR-LYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENG 445
M NG + YN+VL L+ + + L + ++ M++ D +YTIMIHG +
Sbjct: 249 MTSNGLIPNIRSYNIVLAGLFANGEVEKALSR-FEHMQKTRNDLDIITYTIMIHGMCKAC 307
Query: 446 KMKDAMRYFREMTSK 460
+K+A F ++ K
Sbjct: 308 MVKEAYDLFYKLKFK 322
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 129/284 (45%), Gaps = 8/284 (2%)
Query: 177 QFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNA 236
+ G++ D+ +L+ C ++DA + + + RD+ ++++ C
Sbjct: 6 KLGIEPDIVTASSLVNGFCLSNSIKDA-VYVAGQMEKMGIKRDVVVDTILIDTLCKNRLV 64
Query: 237 HEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICN 296
A V K + P++ TY++ I M ++ N P+V+ +
Sbjct: 65 VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKIN--PNVITFS 122
Query: 297 CIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
+IDA + ++ + V++ M + +PNV TY+SLI LC R+++ ++++ M K
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 357 KGSCMPNAVTYSCLLNSLKGPEEVPG---VLERMERNGCSLSDDIYNLVLRLYMKWDNQD 413
C PN VTYS L N V +L+ M + G + + N +++ Y + D
Sbjct: 183 --GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 414 GLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
+ M NG P+ RSY I++ G + NG+++ A+ F M
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 100/227 (44%), Gaps = 36/227 (15%)
Query: 284 EGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRM 343
E K DVV+ +ID LC + V ALEV + MK+RG PNV TY+SLI LCK R+
Sbjct: 40 EKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRL 99
Query: 344 EKVYELVEDMERKK---------------------------------GSCMPNAVTYSCL 370
+ +M+ KK S PN TYS L
Sbjct: 100 ADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSL 159
Query: 371 LNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGC 427
+ L +E +L+ M GC+ + Y+ + + K D K D+M + G
Sbjct: 160 IYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGV 219
Query: 428 GPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+ S +I G+++ GK+ A+ F MTS G++ R+ +V++
Sbjct: 220 AANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 266
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/240 (17%), Positives = 100/240 (41%), Gaps = 5/240 (2%)
Query: 135 QVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWL 194
+V M R N T+S+L+ + ++ +A + + ++ ++ F L+
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 195 CRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ + ++++ + + ++ T++ ++ G C+ EA ++ +++ C P+
Sbjct: 129 AKRGKLSKVDSVYKMMI-QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 255 LFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEV 314
+ TY+T M G + V CN +I ++ AL V
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGV--AANTVSCNTLIKGYFQAGKIDLALGV 245
Query: 315 FQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL 374
F M G PN+ +YN ++ L +EK E M++ + + +TY+ +++ +
Sbjct: 246 FGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDL--DIITYTIMIHGM 303
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/268 (18%), Positives = 113/268 (42%), Gaps = 13/268 (4%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
+P + ++ L K R + + EM ++ N TFS L+ +A K+ + S
Sbjct: 80 SPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDS 139
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHR----DIKTWNVI 226
++ Q +D ++ + +L+ LC + V++A K + + + ++ T++ +
Sbjct: 140 VYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEA-----IKMLDLMISKGCTPNVVTYSTL 194
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC 286
NG+ + ++ D+ + + T I F M + G
Sbjct: 195 ANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGL 254
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKV 346
P++ N ++ L V +AL F+ M++ + ++ TY +I +CK +++
Sbjct: 255 --IPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEA 312
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLNSL 374
Y+L ++ K+ P+ Y+ ++ L
Sbjct: 313 YDLFYKLKFKR--VEPDFKAYTIMIAEL 338
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 156/367 (42%), Gaps = 7/367 (1%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
P+S N +L+I ++ E VFDEMS R + + ++ ++ K++EA
Sbjct: 179 TPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADR 238
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
Q G D +L LC V A F K + ++ + +++G
Sbjct: 239 WLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFR-KMIDLGFKPNLINFTSLIDGL 297
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C G+ +A + ++++ + +P+++T+ I F + KP
Sbjct: 298 CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD-TYKP 356
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
+V +I C + ++ A +F MKE+G PNV TY +LI CK + YEL+
Sbjct: 357 NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELM 416
Query: 351 EDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERN-GCSLSDD--IYNLVLRLYM 407
M + MPN TY+ ++SL P E + + C L D Y ++++
Sbjct: 417 NLMGDE--GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 474
Query: 408 KWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPR 467
K ++ + + M + G D R I+I KMK++ R F+ + S G++
Sbjct: 475 KQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKE 534
Query: 468 TEKLVIS 474
T +IS
Sbjct: 535 TYTSMIS 541
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 149/371 (40%), Gaps = 12/371 (3%)
Query: 109 SYAPTSRVCNEILDIL---GKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
+ P + C IL L G ++R + ++ + L+N F++L+ +
Sbjct: 247 GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLIN---FTSLIDGLCKKGSI 303
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
++A M + G ++ L+ LC+ E A LF R ++ T+
Sbjct: 304 KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTS 363
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
++ G+C + A+ ++ + P++ TY T I M +EG
Sbjct: 364 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 423
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
P++ N ID+LC K R PEA E+ G E + TY LI+ CK + +
Sbjct: 424 F--MPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQ 481
Query: 346 VYELVEDMERK--KGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVL 403
M + + N + + K +E + + + G + + Y ++
Sbjct: 482 ALAFFCRMNKTGFEADMRLNNILIAAFCRQ-KKMKESERLFQLVVSLGLIPTKETYTSMI 540
Query: 404 RLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
Y K + D K + M+R+GC PD +Y +I G + + +A + + M +G+
Sbjct: 541 SCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGL- 599
Query: 464 AEPRTEKLVIS 474
+ P ++ ++
Sbjct: 600 SPPEVTRVTLA 610
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 90/231 (38%), Gaps = 3/231 (1%)
Query: 126 KMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLD 185
K F +++ + M + N T++ + + EA + GL+ D
Sbjct: 405 KAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGV 464
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
+ L+ C+ + A F + + D++ N+++ +C E++R+++
Sbjct: 465 TYTILIQEQCKQNDINQALAFF-CRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 523
Query: 246 IMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFK 305
+++ P TY + I F M GC PD +I LC K
Sbjct: 524 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGC--VPDSFTYGSLISGLCKK 581
Query: 306 KRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
V EA ++++ M +RG P T +L CK L+E +++K
Sbjct: 582 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK 632
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 3/139 (2%)
Query: 339 KIRRMEKVYELVEDMERKKGSCMPNAVTYSCLL---NSLKGPEEVPGVLERMERNGCSLS 395
K R ++Y + D G+ C+L + + E G++ M+ G + S
Sbjct: 122 KFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPS 181
Query: 396 DDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFR 455
N VL + ++ + +DEM G PD SY +M+ G + +GK+++A R+
Sbjct: 182 SITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLT 241
Query: 456 EMTSKGMVAEPRTEKLVIS 474
M +G + + T L+++
Sbjct: 242 GMIQRGFIPDNATCTLILT 260
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 151/364 (41%), Gaps = 31/364 (8%)
Query: 126 KMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLD 185
+M + +F EM + N T+S L+ F + A + + +
Sbjct: 496 RMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEV 555
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
+ T++ LC+ A+ + + +E + ++N I++G+ +G+ A +++
Sbjct: 556 IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYRE 615
Query: 246 IMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFK 305
+ + P++ T+ + I M + K D+ +ID C K
Sbjct: 616 MSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM--KSMELKLDLPAYGALIDGFCKK 673
Query: 306 KRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAV 365
+ A +F ++ E G PNV+ YNSLI + +M+ +L + M SC +
Sbjct: 674 NDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC--DLF 731
Query: 366 TYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDN------QDGLRK-- 417
TY+ +++ L ++ +L+ D+Y+ +L L + D +GL K
Sbjct: 732 TYTTMIDGL------------LKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKG 779
Query: 418 -------TWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEK 470
+EM++ P+ Y+ +I GH+ G + +A R EM KG+V +
Sbjct: 780 QFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFN 839
Query: 471 LVIS 474
L++S
Sbjct: 840 LLVS 843
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 144/368 (39%), Gaps = 10/368 (2%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAA-AHKVEEAI 169
P N +L L + + +E +++++M G+ ++ + LL R + K EEA+
Sbjct: 201 VPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV-LIGVAGDNVTTQLLMRASLRERKPEEAV 259
Query: 170 SMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
+F G + D F + C+ + A L + + +T+ ++
Sbjct: 260 KIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVA 319
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCK 289
+ GN EA RV +++ + + + F M EG
Sbjct: 320 FVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGL--A 377
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
PD V+ + +++ C + +A+E + MK P+ +++I+ K E E+
Sbjct: 378 PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEI 437
Query: 350 VEDMERK--KGSCMPNAVTYSCLLNSLKGP-EEVPGVLERMERNGCSLSDDIYNLVLRLY 406
D M N + LL +G + L+ ME+ G + YN ++ +
Sbjct: 438 FNDSFESWIAHGFMCNKI---FLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAH 494
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEP 466
+ N D R + EM G P+ +Y+I+I G ++N ++A +M + A
Sbjct: 495 CRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANE 554
Query: 467 RTEKLVIS 474
+I+
Sbjct: 555 VIYNTIIN 562
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 113/242 (46%), Gaps = 4/242 (1%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N ILD L K + +E H + + R +V+E T+ TL+ F KVE+A+ M+ ++
Sbjct: 455 NTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
+ + F +L+ LC + E A F A E L D T+N I+ G+C G
Sbjct: 515 VKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA-ESGLLPDDSTFNSIILGYCKEGRVE 573
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
+A + + + +PD +T + F + E + D V N
Sbjct: 574 KAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER---EVDTVTYNT 630
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
+I A C K++ EA ++ +M+E+G EP+ TYNS I L + ++ + EL++ K
Sbjct: 631 MISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKF 690
Query: 358 GS 359
GS
Sbjct: 691 GS 692
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 143/335 (42%), Gaps = 46/335 (13%)
Query: 135 QVFDEMSH---REGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLL 191
Q+F +M + L+ +T L R+ ++ + A +F + G+ L++ F L+
Sbjct: 152 QIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLV 211
Query: 192 MWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKC 251
C +EDA + EF+++ D T+N IL G + K + D+ +
Sbjct: 212 NGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGL 271
Query: 252 RPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEA 311
P+ TY N ++ C + EA
Sbjct: 272 VPNRVTY-------------------------------------NNLVYGYCKLGSLKEA 294
Query: 312 LEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLL 371
++ + MK+ P++ TYN LI LC M + EL++ M+ K P+ VTY+ L+
Sbjct: 295 FQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK--LQPDVVTYNTLI 352
Query: 372 NS---LKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGL-RKTWDEMERNGC 427
+ L E ++E+ME +G + +N+ L+ K + ++ + RK + ++ +G
Sbjct: 353 DGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGF 412
Query: 428 GPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
PD +Y +I + + G + A+ REM KG+
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGI 447
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 160/379 (42%), Gaps = 45/379 (11%)
Query: 135 QVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFY-TREQFGLDLDLDAFRTLLMW 193
+VFD+M +N TF+ L+ + K+E+A+ M +F ++ D + T+L
Sbjct: 190 EVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKA 249
Query: 194 LCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRP 253
+ + + D + L + + + T+N ++ G+C LG+ EA ++ + + + P
Sbjct: 250 MSKKGRLSDLKELLLDMKKNGLVPNRV-TYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 254 DLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVP-EAL 312
DL TY I M + +PDVV N +ID CF+ + EA
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAM--KSLKLQPDVVTYNTLIDG-CFELGLSLEAR 365
Query: 313 EVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLN 372
++ + M+ G + N T+N +K LCK + E V V+++ G P+ VTY L+
Sbjct: 366 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFS-PDIVTYHTLIK 424
Query: 373 SLKGPEEVPGVLE---RMERNGCSLSDDIYNLVL-------------------------- 403
+ ++ G LE M + G ++ N +L
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484
Query: 404 ------RLYMKWDNQDGLRKT---WDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYF 454
L M + ++ + K WDEM++ P ++ +I G +GK + AM F
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 455 REMTSKGMVAEPRTEKLVI 473
E+ G++ + T +I
Sbjct: 545 DELAESGLLPDDSTFNSII 563
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 160/386 (41%), Gaps = 46/386 (11%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV-NEDTFSTLLRRFAAAHKVEEAIS 170
P + N IL + K R +L ++ +M + GLV N T++ L+ + ++EA
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMK-KNGLVPNRVTYNNLVYGYCKLGSLKEAFQ 296
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ +Q + DL + L+ LC + + L + + +L D+ T+N +++G
Sbjct: 297 IVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDA-MKSLKLQPDVVTYNTLIDGC 355
Query: 231 CVLGNAHEAKRVWKDIMASKCR------------------------------------PD 254
LG + EA+++ + + + PD
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415
Query: 255 LFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEV 314
+ TY T I R M +G K + + N I+DALC ++++ EA +
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGI--KMNTITLNTILDALCKERKLDEAHNL 473
Query: 315 FQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL 374
+RG + TY +LI + ++EK E+ ++M KK P T++ L+ L
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM--KKVKITPTVSTFNSLIGGL 531
Query: 375 --KGPEEVP-GVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDR 431
G E+ + + +G D +N ++ Y K + + ++E ++ PD
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 432 RSYTIMIHGHYENGKMKDAMRYFREM 457
+ I+++G + G + A+ +F +
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTL 617
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 131/320 (40%), Gaps = 58/320 (18%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
T+ TL++ + + A+ M Q G+ ++ T+L LC+ + +++A L +S
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNS- 476
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
A + D T+ ++ G+ +A +W ++ K P T +TF
Sbjct: 477 AHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITP---TVSTF--------- 524
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
N +I LC + A+E F ++ E G P+ +T+
Sbjct: 525 -------------------------NSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTF 559
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL-------KGPEEVPGV 383
NS+I CK R+EK +E E K S P+ T + LLN L K +
Sbjct: 560 NSIILGYCKEGRVEKAFEFYN--ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL 617
Query: 384 LERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWD---EMERNGCGPDRRSYTIMIHG 440
+E E + + YN ++ + K L++ +D EME G PDR +Y I
Sbjct: 618 IEEREVDTVT-----YNTMISAFCK---DKKLKEAYDLLSEMEEKGLEPDRFTYNSFISL 669
Query: 441 HYENGKMKDAMRYFREMTSK 460
E+GK+ + ++ + K
Sbjct: 670 LMEDGKLSETDELLKKFSGK 689
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRR---MEKV 346
P + + + A + + AL++FQ M +PN+ T N+L+ L + +
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLNS--LKGP-EEVPGVLERMERNGCSLSDDI-YNLV 402
E+ +DM + S N T++ L+N L+G E+ G+LERM D++ YN +
Sbjct: 189 REVFDDMVKIGVSL--NVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTI 246
Query: 403 LRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
L+ K L++ +M++NG P+R +Y +++G+ + G +K+A + M +
Sbjct: 247 LKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306
Query: 463 VAEPRTEKLVIS 474
+ + T ++I+
Sbjct: 307 LPDLCTYNILIN 318
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
PT N ++ L + E + FDE++ L ++ TF++++ + +VE+A
Sbjct: 518 TPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFE 577
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ + D LL LC+ E A F++ E ++ D T+N +++ +
Sbjct: 578 FYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVTYNTMISAF 635
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFI 262
C EA + ++ PD FTY +FI
Sbjct: 636 CKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 151/355 (42%), Gaps = 14/355 (3%)
Query: 126 KMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLD 185
K + EE ++FDE S GL N +T+L K +EA + E G+ ++
Sbjct: 421 KGQKHEEALKLFDE-SFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
++ +++ CR K+++ A +F S E L + T++++++G + A V
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVF-SNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNH 538
Query: 246 IMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVIC---NCIIDAL 302
+ +S + Y T I M E C V C N IID
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC----VSCMSYNSIIDGF 594
Query: 303 CFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMP 362
+ + A+ +++M G PNV TY SL+ LCK RM++ E+ ++M+ K
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK--GVKL 652
Query: 363 NAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTW 419
+ Y L++ E + + G + S IYN ++ + N +
Sbjct: 653 DIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLY 712
Query: 420 DEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+M ++G D +YT +I G ++G + A + EM + G+V + ++++
Sbjct: 713 KKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVN 767
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 140/330 (42%), Gaps = 7/330 (2%)
Query: 148 NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF 207
N T+S L+ H + A+ + ++++ ++T++ LC+ A L
Sbjct: 512 NNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELL 571
Query: 208 HSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXX 267
+ E +L ++N I++G+ G A ++++ + P++ TY + +
Sbjct: 572 ANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCK 631
Query: 268 XXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
M N+G K D+ +ID C + + A +F ++ E G P+
Sbjct: 632 NNRMDQALEMRDEMKNKGV--KLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQ 689
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLE-- 385
YNSLI + M +L + M + C + TY+ L++ L + E
Sbjct: 690 PIYNSLISGFRNLGNMVAALDLYKKMLKDGLRC--DLGTYTTLIDGLLKDGNLILASELY 747
Query: 386 -RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYEN 444
M+ G + IY +++ K + K ++EM++N P+ Y +I GHY
Sbjct: 748 TEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYRE 807
Query: 445 GKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
G + +A R EM KG++ + T +++S
Sbjct: 808 GNLDEAFRLHDEMLDKGILPDGATFDILVS 837
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 121/259 (46%), Gaps = 5/259 (1%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N I+D K + ++EM N T+++L+ +++++A+ M +
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN 647
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G+ LD+ A+ L+ C+ ++E A LF S+ E L+ +N +++G+ LGN
Sbjct: 648 KGVKLDIPAYGALIDGFCKRSNMESASALF-SELLEEGLNPSQPIYNSLISGFRNLGNMV 706
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
A ++K ++ R DL TY T I + M + PD +I
Sbjct: 707 AALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM--QAVGLVPDEIIYTV 764
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
I++ L K + + +++F++MK+ PNV YN++I + +++ + L ++M K
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK- 823
Query: 358 GSCMPNAVTYSCLLNSLKG 376
+P+ T+ L++ G
Sbjct: 824 -GILPDGATFDILVSGQVG 841
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
D V ++ A +++ EALEV ERG EP+ Y+ ++ CK + L+
Sbjct: 232 DNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLL 291
Query: 351 EDMERKKGSCMPNAVTY-SCLLNSLK--GPEEVPGVLERMERNGCSLSDDIYNLVLRLYM 407
+M+ KK C+P+ TY S +L S+K ++ + + M +G S++ ++ +
Sbjct: 292 REMKEKK-LCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHC 350
Query: 408 KWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
K ++ +D+ME+ G P+ +++++I +NG+M+ A+ ++++M G+
Sbjct: 351 KNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 149/380 (39%), Gaps = 22/380 (5%)
Query: 104 ASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGL-----VNEDTFSTLLRR 158
++K+ + SR N +L+ K + + + ++M + + VN T S L++R
Sbjct: 153 SAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNR-TLSALVQR 211
Query: 159 FAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETL-FHSKAREFQLH 217
+ E Y+R + +D D T L+ + + AE L S+A E
Sbjct: 212 NSLTEAKE-----LYSR-MVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAE 265
Query: 218 RDIKTWNVILNGWCVLGNAHEAKRVWKDIMASK-CRPDLFTYATFIXXXXXXXXXXXXXX 276
D +++ + C + A + +++ K C P TY + I
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIR 325
Query: 277 XFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKH 336
M ++G + +VV +I C + AL +F M++ G PN T++ LI+
Sbjct: 326 LKDEMLSDGISM--NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEW 383
Query: 337 LCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS-LKGP--EEVPGVLERMERNGCS 393
K MEK E + ME P+ ++ LKG EE + + G +
Sbjct: 384 FRKNGEMEKALEFYKKMEVL--GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA 441
Query: 394 LSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRY 453
+ + N +L K D + +ME G GP+ SY ++ GH M A
Sbjct: 442 -NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIV 500
Query: 454 FREMTSKGMVAEPRTEKLVI 473
F + KG+ T ++I
Sbjct: 501 FSNILEKGLKPNNYTYSILI 520
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 146/336 (43%), Gaps = 19/336 (5%)
Query: 98 LVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLR 157
L FF+W+ K+ + + N +L +L + + + ++ +++ TFS +
Sbjct: 87 LRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAE 146
Query: 158 RFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLH 217
K E+AI +F ++F D ++ LC HV+ A + H ++
Sbjct: 147 TLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHH-KDVISG 205
Query: 218 RDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXX 277
++ + +L GW V N EA+RV +D+ ++ PDLF + + +
Sbjct: 206 NELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPS-- 263
Query: 278 FRGMWNEGCN---------CKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVA 328
G+ E N +P + N ++ L +RV E+ ++ + MK GC+P+
Sbjct: 264 --GLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTG 321
Query: 329 TYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVL---E 385
+Y +++ L R K ++V++M + P Y L+ L G E V L E
Sbjct: 322 SYYFVVRVLYLTGRFGKGNQIVDEMIER--GFRPERKFYYDLIGVLCGVERVNFALQLFE 379
Query: 386 RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDE 421
+M+R+ +Y+L++ K N + R+ W+E
Sbjct: 380 KMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEE 415
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 95/261 (36%), Gaps = 57/261 (21%)
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXF 278
D +T++++ +G +A ++K + C D FT I
Sbjct: 137 DKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCS----------- 185
Query: 279 RGMWNEGCNC---KPDVVICN--CIIDALCF----KKRVPEALEVFQDMKERGCEPNVAT 329
RG DV+ N + +L F ++ V EA V QDMK G P++
Sbjct: 186 RGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFC 245
Query: 330 YNSLIKHLCKIRRMEKVYELVED-----MERKKGSCMPNAVTYSCLLNSLKGPEEVPGVL 384
+NSL+ LC+ LV + +E + P +++Y+ LL+ L V
Sbjct: 246 FNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRV---- 301
Query: 385 ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYEN 444
R C + ++M+R+GC PD SY ++ Y
Sbjct: 302 ----RESCQI------------------------LEQMKRSGCDPDTGSYYFVVRVLYLT 333
Query: 445 GKMKDAMRYFREMTSKGMVAE 465
G+ + EM +G E
Sbjct: 334 GRFGKGNQIVDEMIERGFRPE 354
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 153/372 (41%), Gaps = 14/372 (3%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
A+ +++ + P CN +L +L K R + +V+DEM R V+ + L+
Sbjct: 153 AVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILV 212
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQL 216
+ KVE + R G ++ + T++ C+ +E+A +F +E +L
Sbjct: 213 KGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVF----KELKL 268
Query: 217 HR---DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXX 273
++T+ ++NG+C G+ + R+ ++ R ++ I
Sbjct: 269 KGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVD 328
Query: 274 XXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSL 333
W +CKPDV N +I+ LC + + A+ + ++G PN +Y L
Sbjct: 329 PAESIG--WIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPL 386
Query: 334 IKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERN 390
I+ CK + + +L+ M + C P+ VTY L++ L + + ++
Sbjct: 387 IQAYCKSKEYDIASKLLLQMAER--GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR 444
Query: 391 GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDA 450
G S IYN+++ K + + EM PD Y +I G +G +A
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 451 MRYFREMTSKGM 462
+ F KG+
Sbjct: 505 RKVFSLSVEKGV 516
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 166/392 (42%), Gaps = 19/392 (4%)
Query: 93 DWKPALVFFNWAS--KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED 150
D + + F+W S K D + C+ L +L + F E+ V + + + +
Sbjct: 76 DVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHE 135
Query: 151 TFSTLLRRFAAAHKVEEAISMF-YTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS 209
S +L +A + + +A+ ++ Y E + D+ A +LL L + + + DA ++
Sbjct: 136 ALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDE 195
Query: 210 KAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXX 269
+ T +++ G C G +++ + C P++ Y T I
Sbjct: 196 MCDRGDSVDNYSTC-ILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLG 254
Query: 270 XXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVAT 329
F+ + +G P + +I+ C + + + ++KERG +V
Sbjct: 255 DIENAYLVFKELKLKGF--MPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWF 312
Query: 330 YNSLI----KHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL--KGPEEVP-G 382
N++I +H K+ E + ++ + C P+ TY+ L+N L +G +EV G
Sbjct: 313 LNNIIDAKYRHGYKVDPAESIGWIIAN------DCKPDVATYNILINRLCKEGKKEVAVG 366
Query: 383 VLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHY 442
L+ + G ++ Y +++ Y K D K +M GC PD +Y I+IHG
Sbjct: 367 FLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLV 426
Query: 443 ENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+G M DA+ ++ +G+ + +++S
Sbjct: 427 VSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 139/360 (38%), Gaps = 66/360 (18%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
+P + + N ++ L K RF +F EM R L + ++TL+ F + +EA
Sbjct: 447 SPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARK 506
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+F + G+ +D+ +H N ++ G+
Sbjct: 507 VFSLSVEKGVKVDV-------------------------------VHH-----NAMIKGF 530
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C G EA + PD FTY+T I FR M E CKP
Sbjct: 531 CRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM--EKNKCKP 588
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCK-IRRMEKVYEL 349
+VV +I+ C + A E F++M+ R PNV TY +LI+ L K +EK
Sbjct: 589 NVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYY 648
Query: 350 VEDMERKKGSCMPNAVTYSCLL------NSLKGPEEVPG-----------VLERMERNGC 392
E M K C+PN VT++CLL S K E G RM+ +G
Sbjct: 649 WELMMTNK--CVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGW 706
Query: 393 SLSDDIYNLVLRLYMKWDNQDGLRKT----WDEMERNGCGPDRRSYTIMIHGHYENGKMK 448
S YN L G+ KT D+M + G PD S+ ++HG G K
Sbjct: 707 SDHAAAYNSALVCLC----VHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSK 762
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 152/397 (38%), Gaps = 49/397 (12%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N I+ K+ E + VF E+ + + +TF T++ F + + ++
Sbjct: 244 NTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKE 303
Query: 178 FGLDLDLDAFRTLLMWLCRYKH---VEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLG 234
GL + + ++ +Y+H V+ AE++ A + + D+ T+N+++N C G
Sbjct: 304 RGLRVSVWFLNNIID--AKYRHGYKVDPAESIGWIIANDCK--PDVATYNILINRLCKEG 359
Query: 235 NAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVI 294
A + P+ +YA I M GC KPD+V
Sbjct: 360 KKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC--KPDIVT 417
Query: 295 CNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDME 354
+I L + +A+ + + +RG P+ A YN L+ LCK R L +M
Sbjct: 418 YGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEML 477
Query: 355 RKKGSCMPNAVTYSCLLNS--------------------------------LKG------ 376
+ + +P+A Y+ L++ +KG
Sbjct: 478 DR--NILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGM 535
Query: 377 PEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTI 436
+E + RM Y+ ++ Y+K + K + ME+N C P+ +YT
Sbjct: 536 LDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTS 595
Query: 437 MIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
+I+G G K A F+EM + +V T +I
Sbjct: 596 LINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 5/262 (1%)
Query: 113 TSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMF 172
T + N ++++L E+ FD N +F+ L++ F E A +F
Sbjct: 150 TIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVF 209
Query: 173 YTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCV 232
+ + + + +L+ +LCR + A++L ++ ++ + T+ +++ G C
Sbjct: 210 DEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKK-RIRPNAVTFGLLMKGLCC 268
Query: 233 LGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDV 292
G +EAK++ D+ C+P L Y + M KPDV
Sbjct: 269 KGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKR--RIKPDV 326
Query: 293 VICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVED 352
VI N +++ LC + RVPEA V +M+ +GC+PN ATY +I C+I + ++
Sbjct: 327 VIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNA 386
Query: 353 MERKKGSCMPNAVTYSCLLNSL 374
M + P T+ C++ L
Sbjct: 387 MLASRHC--PTPATFVCMVAGL 406
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 136/315 (43%), Gaps = 16/315 (5%)
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
EEA+S+F+ ++ G D ++ +L+ L + ++ + + + +R+++
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILR-----LVRYRNVRCRES 117
Query: 226 ILNG----WCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGM 281
+ G + G+ +A V+ I + C + + T I F G
Sbjct: 118 LFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGA 177
Query: 282 WNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIR 341
+ +P+ V N +I K A +VF +M E +P+V TYNSLI LC+
Sbjct: 178 KD--MRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRND 235
Query: 342 RMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL--KGP-EEVPGVLERMERNGCSLSDDI 398
M K L+EDM +K+ PNAVT+ L+ L KG E ++ ME GC
Sbjct: 236 DMGKAKSLLEDMIKKR--IRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVN 293
Query: 399 YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMT 458
Y +++ K D + EM++ PD Y I+++ ++ +A R EM
Sbjct: 294 YGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQ 353
Query: 459 SKGMVAEPRTEKLVI 473
KG T +++I
Sbjct: 354 MKGCKPNAATYRMMI 368
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 171/422 (40%), Gaps = 62/422 (14%)
Query: 100 FFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHRE------------GLV 147
FF W S + + +++ IL K F+ HQ+ D+++ RE G V
Sbjct: 66 FFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGV 125
Query: 148 NED------TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYK--- 198
+ED FS L+ +A A + ++I +F GL L A LL L + +
Sbjct: 126 SEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTD 185
Query: 199 ------------------HV--------------EDAETLFHSKAREFQLHRDIKTWNVI 226
HV E AE L S+ E + DI T+N +
Sbjct: 186 TVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLL-SEMEEKGVFPDIFTYNTL 244
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC 286
++ +C EA V + S P++ TY +FI FR + ++
Sbjct: 245 ISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD-- 302
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKV 346
+ V +ID C + EAL + + M+ RG P V TYNS+++ LC+ R+ +
Sbjct: 303 -VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREA 361
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPG---VLERMERNGCSLSDDIYNLVL 403
L+ +M KK P+ +T + L+N+ E++ V ++M +G L Y ++
Sbjct: 362 NRLLTEMSGKK--IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419
Query: 404 RLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
+ K + ++ M G P +Y+ ++ G Y K + + E +G+
Sbjct: 420 HGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLC 479
Query: 464 AE 465
A+
Sbjct: 480 AD 481
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 172/398 (43%), Gaps = 42/398 (10%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + C +L+ L K + + ++F +M + N ++ L+ + + E+A +
Sbjct: 166 PHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKL 225
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYK------HVED-------------AETLFHSKAR 212
E+ G+ D+ + TL+ C+ V+D + H +R
Sbjct: 226 LSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSR 285
Query: 213 E------FQLHRDIK--------TWNVILNGWCVLGNAHEAKRVWKDIMASKC-RPDLFT 257
E +L R+IK T+ +++G+C + + EA R+ +++M S+ P + T
Sbjct: 286 EGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRL-REVMESRGFSPGVVT 344
Query: 258 YATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQD 317
Y + + M G +PD + CN +I+A C + + A++V +
Sbjct: 345 YNSILRKLCEDGRIREANRLLTEM--SGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKK 402
Query: 318 MKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL--- 374
M E G + ++ +Y +LI CK+ +E E + M K S P TYS L++
Sbjct: 403 MIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFS--PGYATYSWLVDGFYNQ 460
Query: 375 KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSY 434
+E+ +LE E+ G +Y ++R K + D + ++ ME+ G D +
Sbjct: 461 NKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIF 520
Query: 435 TIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLV 472
T M + ++ GK+ +A F M ++ ++ + K +
Sbjct: 521 TTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSI 558
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 172/397 (43%), Gaps = 48/397 (12%)
Query: 106 KADSYA--PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAH 163
K D + P+ VC +L + ++ E + + M R +N S +R++ +
Sbjct: 226 KVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDG 285
Query: 164 KVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTW 223
++ + + +G+ D+ AF + LC+ +++A ++ K + F + +D +
Sbjct: 286 YFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLF-KLKLFGISQDSVSV 344
Query: 224 NVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWN 283
+ +++G+C +G EA ++ I + + RP++F Y++F+ F+ ++
Sbjct: 345 SSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Query: 284 EGCNCKPDVVICNCIIDALCFKKRVPEALE------------------------------ 313
G PD V +ID C R +A +
Sbjct: 402 LG--LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSI 459
Query: 314 -----VFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYS 368
VF++MK G + +V TYN+L+ K ++ KV+EL+++M + P+ TY+
Sbjct: 460 SDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEM--RSAGISPDVATYN 517
Query: 369 CLLNSL--KG-PEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERN 425
L++S+ +G +E ++ + R G S + V+ + K + W M
Sbjct: 518 ILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADL 577
Query: 426 GCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
PD + + ++HG+ + +M+ A+ F ++ G+
Sbjct: 578 RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL 614
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 12/234 (5%)
Query: 151 TFSTLL----RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETL 206
T ST+L RF + + +A S+F + GL LD+ + L+ + + L
Sbjct: 444 TTSTILIGACSRFGS---ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL 500
Query: 207 FHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXX 266
+ R + D+ T+N++++ V G EA + +++ P + I
Sbjct: 501 I-DEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 267 XXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPN 326
+ M + KPDVV C+ ++ C +R+ +A+ +F + + G +P+
Sbjct: 560 KRGDFQEAFILWFYMAD--LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 327 VATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEV 380
V YN+LI C + +EK EL+ M ++ +PN T+ L+ L+G V
Sbjct: 618 VVLYNTLIHGYCSVGDIEKACELIGLMVQR--GMLPNESTHHALVLGLEGKRFV 669
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 172/397 (43%), Gaps = 48/397 (12%)
Query: 106 KADSYA--PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAH 163
K D + P+ VC +L + ++ E + + M R +N S +R++ +
Sbjct: 226 KVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDG 285
Query: 164 KVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTW 223
++ + + +G+ D+ AF + LC+ +++A ++ K + F + +D +
Sbjct: 286 YFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLF-KLKLFGISQDSVSV 344
Query: 224 NVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWN 283
+ +++G+C +G EA ++ I + + RP++F Y++F+ F+ ++
Sbjct: 345 SSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Query: 284 EGCNCKPDVVICNCIIDALCFKKRVPEALE------------------------------ 313
G PD V +ID C R +A +
Sbjct: 402 LG--LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSI 459
Query: 314 -----VFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYS 368
VF++MK G + +V TYN+L+ K ++ KV+EL+++M + P+ TY+
Sbjct: 460 SDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEM--RSAGISPDVATYN 517
Query: 369 CLLNSL--KG-PEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERN 425
L++S+ +G +E ++ + R G S + V+ + K + W M
Sbjct: 518 ILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADL 577
Query: 426 GCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
PD + + ++HG+ + +M+ A+ F ++ G+
Sbjct: 578 RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL 614
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 12/234 (5%)
Query: 151 TFSTLL----RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETL 206
T ST+L RF + + +A S+F + GL LD+ + L+ + + L
Sbjct: 444 TTSTILIGACSRFGS---ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL 500
Query: 207 FHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXX 266
+ R + D+ T+N++++ V G EA + +++ P + I
Sbjct: 501 I-DEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 267 XXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPN 326
+ M + KPDVV C+ ++ C +R+ +A+ +F + + G +P+
Sbjct: 560 KRGDFQEAFILWFYMAD--LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 327 VATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEV 380
V YN+LI C + +EK EL+ M ++ +PN T+ L+ L+G V
Sbjct: 618 VVLYNTLIHGYCSVGDIEKACELIGLMVQR--GMLPNESTHHALVLGLEGKRFV 669
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 164/377 (43%), Gaps = 12/377 (3%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV-NEDTFSTL 155
A+V N SK D P + +++ K+ RF+ ++ + +R GL N +STL
Sbjct: 462 AVVLLNEMSK-DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI-YRVGLSPNGIIYSTL 519
Query: 156 LRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ 215
+ ++EAI ++ G D F L+ LC+ V +AE +
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579
Query: 216 LHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXX 275
L + +++ ++NG+ G +A V+ ++ P FTY + +
Sbjct: 580 LPNTV-SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638
Query: 276 XXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIK 335
+ + D V+ N ++ A+C + +A+ +F +M +R P+ TY SLI
Sbjct: 639 KFLKSL--HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 696
Query: 336 HLCKIRRMEKVYELVEDMERK-KGSCMPNAVTYSCLLNSL-KGPEEVPGVLERMERNGCS 393
LC R+ + V ++ E + +G+ +PN V Y+C ++ + K + G+ R + +
Sbjct: 697 GLC--RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 754
Query: 394 LSDDIY--NLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAM 451
+ DI N ++ Y + + EM GP+ +Y I++HG+ + + +
Sbjct: 755 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 814
Query: 452 RYFREMTSKGMVAEPRT 468
+R + G++ + T
Sbjct: 815 LLYRSIILNGILPDKLT 831
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 158/363 (43%), Gaps = 18/363 (4%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEM--SHREGLVNEDTFSTLLRRFAAAH 163
+A Y P + E+ + GK S VF + ++R N + L+R +
Sbjct: 124 RARMYDPARHILKELSLMSGKSSF------VFGALMTTYRLCNSNPSVYDILIRVYLREG 177
Query: 164 KVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAET-LFHSKAREFQLHRDIKT 222
+++++ +F +G + + +L + K ED F + + ++ D+ T
Sbjct: 178 MIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV--KSGEDVSVWSFLKEMLKRKICPDVAT 235
Query: 223 WNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMW 282
+N+++N C G+ ++ + + + S P + TY T + M
Sbjct: 236 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 295
Query: 283 NEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRR 342
++G + DV N +I LC R+ + + +DM++R PN TYN+LI +
Sbjct: 296 SKGVD--ADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 353
Query: 343 MEKVYELVEDMERKKGSCMPNAVTYSCLLN---SLKGPEEVPGVLERMERNGCSLSDDIY 399
+ +L+ +M S PN VT++ L++ S +E + ME G + S+ Y
Sbjct: 354 VLIASQLLNEMLSFGLS--PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 411
Query: 400 NLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
++L K D R + M+RNG R +YT MI G +NG + +A+ EM+
Sbjct: 412 GVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 471
Query: 460 KGM 462
G+
Sbjct: 472 DGI 474
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 154/386 (39%), Gaps = 39/386 (10%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N ++++L FE+ + +M T++T+L + + + AI +
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ G+D D+ + L+ LCR + L R+ +H + T+N ++NG+
Sbjct: 291 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD-MRKRMIHPNEVTYNTLINGFS 349
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC----- 286
G A ++ ++++ P+ T+ I F M +G
Sbjct: 350 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 409
Query: 287 -----------NCKPDVV-----------IC------NCIIDALCFKKRVPEALEVFQDM 318
N + D+ +C +ID LC + EA+ + +M
Sbjct: 410 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469
Query: 319 KERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS---LK 375
+ G +P++ TY++LI CK+ R + E+V + R S PN + YS L+ + +
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS--PNGIIYSTLIYNCCRMG 527
Query: 376 GPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYT 435
+E + E M G + +N+++ K + M +G P+ S+
Sbjct: 528 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 587
Query: 436 IMIHGHYENGKMKDAMRYFREMTSKG 461
+I+G+ +G+ A F EMT G
Sbjct: 588 CLINGYGNSGEGLKAFSVFDEMTKVG 613
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 153/363 (42%), Gaps = 11/363 (3%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N ++ L K + E + M+ L N +F L+ + + + +A S+F +
Sbjct: 552 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 611
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G + +LL LC+ H+ +AE S D +N +L C GN
Sbjct: 612 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS-LHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
+A ++ +++ PD +TY + I + G N P+ V+ C
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG-NVLPNKVMYTC 729
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
+D + + + + M G P++ T N++I ++ ++EK +L+ +M +
Sbjct: 730 FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 789
Query: 358 GSCMPNAVTYSCLLNSLKGPEEVPG---VLERMERNGCSLSDDI--YNLVLRLYMKWDNQ 412
G PN TY+ LL+ ++V + + NG L D + ++LVL + +
Sbjct: 790 GG--PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI-LPDKLTCHSLVLGICESNMLE 846
Query: 413 DGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLV 472
GL+ + R G DR ++ ++I NG++ A + MTS G+ + T +
Sbjct: 847 IGLKILKAFICR-GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAM 905
Query: 473 ISM 475
+S+
Sbjct: 906 VSV 908
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 143/375 (38%), Gaps = 44/375 (11%)
Query: 92 SDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDT 151
++K AL F + +A P+ +LD L K + F+ + M V T
Sbjct: 387 GNFKEALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 445
Query: 152 FSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKA 211
++ ++ ++EA+ + + G+D D+ + L+ C+ + A+ + +
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV-CRI 504
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
L + ++ ++ C +G EA R+++ ++ D FT+ +
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564
Query: 272 XXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYN 331
R M ++G P+ V +C+I+ +A VF +M + G P TY
Sbjct: 565 AEAEEFMRCMTSDG--ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 622
Query: 332 SLIKHLCK---IRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERME 388
SL+K LCK +R EK LK VP ++ +
Sbjct: 623 SLLKGLCKGGHLREAEKF---------------------------LKSLHAVPAAVDTV- 654
Query: 389 RNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMK 448
+YN +L K N + EM + PD +YT +I G GK
Sbjct: 655 ---------MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705
Query: 449 DAMRYFREMTSKGMV 463
A+ + +E ++G V
Sbjct: 706 IAILFAKEAEARGNV 720
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 95/232 (40%), Gaps = 5/232 (2%)
Query: 147 VNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETL 206
V+ TF+ L+ + A ++ A + G+ LD D ++ L R +++ +
Sbjct: 862 VDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMV 921
Query: 207 FHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXX 266
H +++ + + + + ++NG C +G+ A V ++++A K P + +
Sbjct: 922 LHEMSKQ-GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 980
Query: 267 XXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPN 326
R M P + ++ C V EALE+ M G + +
Sbjct: 981 KCGKADEATLLLRFMLKM--KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 1038
Query: 327 VATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE 378
+ +YN LI LC M +EL E+M K + NA TY L+ L E
Sbjct: 1039 LVSYNVLITGLCAKGDMALAFELYEEM--KGDGFLANATTYKALIRGLLARE 1088
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 152/340 (44%), Gaps = 8/340 (2%)
Query: 126 KMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLD 185
K EE VF+ + ++ + ++ + L+ + ++ +A+ + + G+ +
Sbjct: 308 KKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTT 367
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
+L+ C+ + +AE +F S+ ++ L D T+N +++G+C G EA ++
Sbjct: 368 ICNSLINGYCKSGQLVEAEQIF-SRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQ 426
Query: 246 IMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFK 305
+ + P + TY + ++ M G N D + C+ +++AL
Sbjct: 427 MCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVN--ADEISCSTLLEALFKL 484
Query: 306 KRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAV 365
EA+++++++ RG + T N +I LCK+ ++ + E+++++ + C P
Sbjct: 485 GDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR--CKPAVQ 542
Query: 366 TYSCLLNS---LKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEM 422
TY L + + +E V E MER G + ++YN ++ K+ + + + E+
Sbjct: 543 TYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL 602
Query: 423 ERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
G P +Y +I G G + A EM KG+
Sbjct: 603 RARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 642
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 154/359 (42%), Gaps = 15/359 (4%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGL-VNEDTFSTLLRRFAAAHKVEEAI 169
+P C+ +++ + ++ E GL +N T+++L+ +A VE
Sbjct: 222 SPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMT 281
Query: 170 SMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
+ + G+ ++ + +L+ C+ +E+AE +F +E +L D + V+++G
Sbjct: 282 RVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFEL-LKEKKLVADQHMYGVLMDG 340
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGM--WNEGCN 287
+C G +A RV +++ R + + I F M W+
Sbjct: 341 YCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS---- 396
Query: 288 CKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVY 347
KPD N ++D C V EAL++ M ++ P V TYN L+K +I V
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456
Query: 348 ELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDI-YNLVL 403
L + M ++ + ++ S LL +L E + E + G L+D I N+++
Sbjct: 457 SLWKMMLKR--GVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGL-LTDTITLNVMI 513
Query: 404 RLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
K + + ++ D + C P ++Y + HG+Y+ G +K+A M KG+
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 572
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 161/405 (39%), Gaps = 43/405 (10%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
S P N ++D + +E ++ D+M +E + T++ LL+ ++ +
Sbjct: 396 SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDV 455
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+S++ + G++ D + TLL L + +A L+ + L D T NV+++
Sbjct: 456 LSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLAR-GLLTDTITLNVMIS 514
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
G C + +EAK + ++ +C+P + TY M +G
Sbjct: 515 GLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF- 573
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
P + + N +I + + + ++ +++ RG P VATY +LI C I ++K Y
Sbjct: 574 -PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYA 632
Query: 349 LVEDMERKKGSCMPNA-------------VTYSCLLNS--------LKGPEEVPGVLE-- 385
+M K + N + +CLL L G + + LE
Sbjct: 633 TCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEAS 692
Query: 386 -----RMERNGCSLSDD-----------IYNLVLRLYMKWDNQDGLRKTW-DEMERNGCG 428
+ ++ S+ + +YN+ + K + RK + D + +
Sbjct: 693 ATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFI 752
Query: 429 PDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
PD +YTI+IHG G + A EM KG++ T +I
Sbjct: 753 PDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALI 797
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/379 (20%), Positives = 158/379 (41%), Gaps = 29/379 (7%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGL----VNEDTFSTLLRR---FAA 161
S++PT V + IL + + + VFD M + + S L+R+ F A
Sbjct: 152 SFSPT--VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVA 209
Query: 162 AHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIK 221
H ++ IS + + F + ++A+ CR +V+ A L ++
Sbjct: 210 LHVYDQMISFEVSPDVFTCSIVVNAY-------CRSGNVDKAMVFAKETESSLGLELNVV 262
Query: 222 TWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGM 281
T+N ++NG+ ++G+ RV + + ++ TY + I F +
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 322
Query: 282 WNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIR 341
+ D + ++D C ++ +A+ V +M E G N NSLI CK
Sbjct: 323 KEK--KLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Query: 342 RM---EKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLS 395
++ E+++ + D K P+ TY+ L++ +E + ++M + +
Sbjct: 381 QLVEAEQIFSRMNDWSLK-----PDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT 435
Query: 396 DDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFR 455
YN++L+ Y + + W M + G D S + ++ ++ G +AM+ +
Sbjct: 436 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
Query: 456 EMTSKGMVAEPRTEKLVIS 474
+ ++G++ + T ++IS
Sbjct: 496 NVLARGLLTDTITLNVMIS 514
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 144/365 (39%), Gaps = 36/365 (9%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N ++ L KM + E ++ D ++ T+ L + ++EA ++ E+
Sbjct: 510 NVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMER 569
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVED-AETLFHSKAREFQLHRDIKTWNVILNGWCVLGNA 236
G+ ++ + TL+ +Y+H+ A+ + +AR L + T+ ++ GWC +G
Sbjct: 570 KGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRAR--GLTPTVATYGALITGWCNIG-- 625
Query: 237 HEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFR-GMWNEGCNCKPDVVIC 295
M K F FR +E C +V
Sbjct: 626 ----------MIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDF 675
Query: 296 NCIIDAL-------------CFK-KRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIR 341
+ ++ C K +++ E++E ++ PN YN I LCK
Sbjct: 676 DLLLPGYQSLKEFLEASATTCLKTQKIAESVE--NSTPKKLLVPNNIVYNVAIAGLCKAG 733
Query: 342 RMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVL---ERMERNGCSLSDDI 398
++E +L D+ +P+ TY+ L++ ++ + M G +
Sbjct: 734 KLEDARKLFSDL-LSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVT 792
Query: 399 YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMT 458
YN +++ K N D ++ ++ + G P+ +Y +I G ++G + +AMR +M
Sbjct: 793 YNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMI 852
Query: 459 SKGMV 463
KG+V
Sbjct: 853 EKGLV 857
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 161/369 (43%), Gaps = 37/369 (10%)
Query: 117 CNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTRE 176
C + + +L +M R + VF +++T++R F ++E+A+ + +
Sbjct: 158 CGKAVSLLREMRRNSLMPDVF-------------SYNTVIRGFCEGKELEKALELANEMK 204
Query: 177 QFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNA 236
G L + L+ C+ +++A F + + L D+ + ++ G+C G
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMG-FLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263
Query: 237 HEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICN 296
K ++ +++ P TY T I F M G +P+V
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV--RPNVYTYT 321
Query: 297 CIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
+ID LC + EAL++ M E+ EPN TYN +I LCK + E+VE M+++
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 357 KGSCMPNAVTYSCLLNSL--KGP-EEVPGVLERMERNGCSLSDDI--YNLVL-------R 404
+ P+ +TY+ LL L KG +E +L M ++ D+ YN ++ R
Sbjct: 382 RTR--PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439
Query: 405 LYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVA 464
L+ D D L +E+ G G DR + I+++ + G + AM +++++ +V
Sbjct: 440 LHQALDIYDLL------VEKLGAG-DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVR 492
Query: 465 EPRTEKLVI 473
T +I
Sbjct: 493 NSDTYTAMI 501
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 146/330 (44%), Gaps = 6/330 (1%)
Query: 136 VFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLC 195
+FDE+ R T++TL+R F +++EA +F + G+ ++ + L+ LC
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 196 RYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDL 255
++A L + + + + T+N+I+N C G +A + + + + RPD
Sbjct: 329 GVGKTKEALQLLNLMIEKDE-EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 256 FTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVF 315
TY + M + PDV+ N +I LC + R+ +AL+++
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447
Query: 316 QDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL- 374
+ E+ + T N L+ K + K EL + + K + N+ TY+ +++
Sbjct: 448 DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK--IVRNSDTYTAMIDGFC 505
Query: 375 -KGPEEVP-GVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRR 432
G V G+L +M + S YN +L K + D + ++EM+R+ PD
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565
Query: 433 SYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
S+ IMI G + G +K A M+ G+
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 153/376 (40%), Gaps = 30/376 (7%)
Query: 95 KPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFST 154
K AL N + D P + N I++ L K + ++ + M R + T++
Sbjct: 334 KEALQLLNLMIEKDE-EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 155 LLRRFAAAHKVEEAISMFYT--REQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAR 212
LL A ++EA + Y ++ D D+ ++ L+ LC+ + A ++
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 213 EFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXX 272
+ D T N++LN G+ ++A +WK I SK + TY I
Sbjct: 453 KLG-AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT---- 507
Query: 273 XXXXXFRGMWN--EGCNCK-------PDVVICNCIIDALCFKKRVPEALEVFQDMKERGC 323
GM N +G CK P V NC++ +LC + + +A +F++M+
Sbjct: 508 -------GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNN 560
Query: 324 EPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLN---SLKGPEEV 380
P+V ++N +I K ++ L+ M R S P+ TYS L+N L +E
Sbjct: 561 FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS--PDLFTYSKLINRFLKLGYLDEA 618
Query: 381 PGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRR-SYTIMIH 439
++M +G I + VL+ + D L + ++ D+ + T+M +
Sbjct: 619 ISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDY 678
Query: 440 GHYENGKMKDAMRYFR 455
+ M A R R
Sbjct: 679 MCNSSANMDLAKRLLR 694
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 5/170 (2%)
Query: 296 NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
N ++ LC +A+ + ++M+ P+V +YN++I+ C+ + +EK EL +M
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM-- 203
Query: 356 KKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQ 412
K C + VT+ L+++ +E G L+ M+ G +Y ++R +
Sbjct: 204 KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263
Query: 413 DGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
D + +DE+ G P +Y +I G + G++K+A F M +G+
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
PDV N +I C K + +ALE+ +MK GC ++ T+ LI CK +M++
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSL-------KGPEEVPGVLERMERNGCSLSDDIYNLV 402
+++M K + V Y+ L+ +G VLER + + C+++ YN +
Sbjct: 235 LKEM--KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD-SPCAIT---YNTL 288
Query: 403 LRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
+R + K + ++ M G P+ +YT +I G GK K+A++ M K
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 463 VAEPRTEKLVIS 474
T ++I+
Sbjct: 349 EPNAVTYNIIIN 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 114/296 (38%), Gaps = 54/296 (18%)
Query: 224 NVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWN 283
N++L G C +A + +++ + PD+F+Y T I M
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM-- 203
Query: 284 EGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMK------------------------ 319
+G C +V +IDA C ++ EA+ ++MK
Sbjct: 204 KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263
Query: 320 -----------ERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYS 368
ERG P TYN+LI+ CK+ ++++ E+ E M + PN TY+
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER--GVRPNVYTYT 321
Query: 369 CLLNSLKG---PEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDE---- 421
L++ L G +E +L M + YN+++ K DGL E
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK----DGLVADAVEIVEL 377
Query: 422 MERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISMNS 477
M++ PD +Y I++ G G + +A + M +P VIS N+
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPD----VISYNA 429
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 5/154 (3%)
Query: 311 ALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCL 370
A V M +RG NV +N L+K LC+ K L+ +M R S MP+ +Y+ +
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN--SLMPDVFSYNTV 183
Query: 371 LNSLKGPEEVPGVLE---RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGC 427
+ +E+ LE M+ +GCS S + +++ + K D EM+ G
Sbjct: 184 IRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGL 243
Query: 428 GPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
D YT +I G + G++ F E+ +G
Sbjct: 244 EADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 147/333 (44%), Gaps = 16/333 (4%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
T+S+L+ F + +++ + G D+ + L+ L + + A F K
Sbjct: 428 TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR-FSVK 486
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
+ ++ +N +++GWC L EA +V++ + +PD+ T+ T +
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDA 546
Query: 271 XXXXXXXFRGM----WNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPN 326
G+ + D+ +CN +I L R+ +A + F ++ E EP+
Sbjct: 547 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 606
Query: 327 VATYNSLIKHLCKIRRM---EKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGV 383
+ TYN++I C +RR+ E+++EL+ K PN VT + L++ L ++ G
Sbjct: 607 IVTYNTMICGYCSLRRLDEAERIFELL-----KVTPFGPNTVTLTILIHVLCKNNDMDGA 661
Query: 384 LER---MERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHG 440
+ M G + Y ++ + K + +G K ++EM+ G P SY+I+I G
Sbjct: 662 IRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 721
Query: 441 HYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
+ G++ +A F + ++ + ++I
Sbjct: 722 LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 754
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 145/338 (42%), Gaps = 16/338 (4%)
Query: 134 HQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQF-GLDLDLDAFRTLLM 192
H++F + H+ ++ FS+ + + + + A S+ Y R G+ ++ + L+
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA-SVVYKRMLCQGISPNVVTYTILIK 399
Query: 193 WLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCR 252
LC+ + +A ++ + + I T++ +++G+C GN +++D++
Sbjct: 400 GLCQDGRIYEAFGMYGQILKR-GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP 458
Query: 253 PDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEAL 312
PD+ Y + M G + + +VV+ N +ID C R EAL
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKML--GQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 313 EVFQDMKERGCEPNVATYNSLIK------HLCKIRRMEKVYELVEDMERKKGSC---MPN 363
+VF+ M G +P+VAT+ ++++ CK + +L + M+R K S + N
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 576
Query: 364 AVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEME 423
V + LL E+ + YN ++ Y D + ++ ++
Sbjct: 577 VVIH--LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 634
Query: 424 RNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
GP+ + TI+IH +N M A+R F M KG
Sbjct: 635 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 672
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 142/325 (43%), Gaps = 15/325 (4%)
Query: 120 ILDIL---GKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTRE 176
+LD L G++++ + H++ E R G+V+ + + + + ++E A +
Sbjct: 223 VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNK----VLKGLSVDQIEVASRLLSLVL 278
Query: 177 QFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNA 236
G ++ F TL+ C+ ++ A LF + + D+ ++ +++G+ G
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR-GIEPDLIAYSTLIDGYFKAGML 337
Query: 237 HEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICN 296
+++ + + D+ +++ I ++ M +G + P+VV
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS--PNVVTYT 395
Query: 297 CIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
+I LC R+ EA ++ + +RG EP++ TY+SLI CK + + L EDM
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM--I 453
Query: 357 KGSCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERNGCSLSDDIYNLVLRLYMKWDNQD 413
K P+ V Y L++ L + + +M L+ ++N ++ + + + D
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 414 GLRKTWDEMERNGCGPDRRSYTIMI 438
K + M G PD ++T ++
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVM 538
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 115/281 (40%), Gaps = 44/281 (15%)
Query: 116 VCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLR------RFAAAHKVEEAI 169
V N ++D +++RF+E +VF M + TF+T++R F K +
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGL 557
Query: 170 SMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
+F ++ + D+ ++ L + +EDA F++ E ++ DI T+N ++ G
Sbjct: 558 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI-EGKMEPDIVTYNTMICG 616
Query: 230 WCVLGNAHEAKRVWK----------------------------------DIMASK-CRPD 254
+C L EA+R+++ IMA K +P+
Sbjct: 617 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 676
Query: 255 LFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEV 314
TY + F M +G + P +V + IID LC + RV EA +
Sbjct: 677 AVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS--PSIVSYSIIIDGLCKRGRVDEATNI 734
Query: 315 FQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
F + P+V Y LI+ CK+ R+ + L E M R
Sbjct: 735 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLR 775
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 83/174 (47%), Gaps = 6/174 (3%)
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
+V CN ++ L + + A + + + G PNV T+ +LI CK M++ ++L +
Sbjct: 252 IVSCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 352 DMERKKGSCMPNAVTYSCLLNS-LKGPEEVPG--VLERMERNGCSLSDDIYNLVLRLYMK 408
ME++ P+ + YS L++ K G + + G L +++ + +Y+K
Sbjct: 311 VMEQR--GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVK 368
Query: 409 WDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
+ + M G P+ +YTI+I G ++G++ +A + ++ +GM
Sbjct: 369 SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
K + P + ++ +L K + + ++F M+ + N T+ L+ F+ + +
Sbjct: 634 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 693
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
E + +F ++ G+ + ++ ++ LC+ V++A +FH +A + +L D+ + +
Sbjct: 694 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH-QAIDAKLLPDVVAYAI 752
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
++ G+C +G EA +++ ++ + +PD
Sbjct: 753 LIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 172/435 (39%), Gaps = 69/435 (15%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELH---------------- 134
+ D+ +L FFNWA + + + +L L K +F+
Sbjct: 92 QKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPA 151
Query: 135 QVFDEM--SHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLM 192
+VFD + S+RE F +L + FA K A F + +G +++ +
Sbjct: 152 KVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMS 211
Query: 193 WLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCR 252
L V D F+ + R ++ + T N++++G+C G + + +D+ R
Sbjct: 212 SLLGQGRV-DIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFR 270
Query: 253 PDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEAL 312
+Y T I M G +P+VV N +I C ++ EA
Sbjct: 271 ATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL--QPNVVTFNTLIHGFCRAMKLQEAS 328
Query: 313 EVFQDMKERGCEPNVATYNSLIK-----------------------------------HL 337
+VF +MK PN TYN+LI L
Sbjct: 329 KVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGL 388
Query: 338 CKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLL-------NSLKGPEEVPGVLERMERN 390
CK + K + V++++++ + +PN+ T+S L+ N+ +G E + + M R+
Sbjct: 389 CKQAKTRKAAQFVKELDKE--NLVPNSSTFSALIMGQCVRKNADRGFE----LYKSMIRS 442
Query: 391 GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDA 450
GC ++ +N+++ + + ++ DG + EM R D R+ + +G GK +
Sbjct: 443 GCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLV 502
Query: 451 MRYFREMTSKGMVAE 465
+ +EM K + E
Sbjct: 503 KKLLQEMEGKKFLQE 517
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 5/187 (2%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
P V CN + +L + RV AL +++M+ PN T N ++ C+ +++K EL
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERNGCSLSDDIYNLVLRLY 406
++DMER V+Y+ L+ + L+ M ++G + +N ++ +
Sbjct: 261 LQDMERL--GFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEP 466
+ K + EM+ P+ +Y +I+G+ + G + A R++ +M G+ +
Sbjct: 319 CRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI 378
Query: 467 RTEKLVI 473
T +I
Sbjct: 379 LTYNALI 385
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 172/435 (39%), Gaps = 69/435 (15%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELH---------------- 134
+ D+ +L FFNWA + + + +L L K +F+
Sbjct: 92 QKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPA 151
Query: 135 QVFDEM--SHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLM 192
+VFD + S+RE F +L + FA K A F + +G +++ +
Sbjct: 152 KVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMS 211
Query: 193 WLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCR 252
L V D F+ + R ++ + T N++++G+C G + + +D+ R
Sbjct: 212 SLLGQGRV-DIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFR 270
Query: 253 PDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEAL 312
+Y T I M G +P+VV N +I C ++ EA
Sbjct: 271 ATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL--QPNVVTFNTLIHGFCRAMKLQEAS 328
Query: 313 EVFQDMKERGCEPNVATYNSLIK-----------------------------------HL 337
+VF +MK PN TYN+LI L
Sbjct: 329 KVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGL 388
Query: 338 CKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLL-------NSLKGPEEVPGVLERMERN 390
CK + K + V++++++ + +PN+ T+S L+ N+ +G E + + M R+
Sbjct: 389 CKQAKTRKAAQFVKELDKE--NLVPNSSTFSALIMGQCVRKNADRGFE----LYKSMIRS 442
Query: 391 GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDA 450
GC ++ +N+++ + + ++ DG + EM R D R+ + +G GK +
Sbjct: 443 GCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLV 502
Query: 451 MRYFREMTSKGMVAE 465
+ +EM K + E
Sbjct: 503 KKLLQEMEGKKFLQE 517
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 5/187 (2%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
P V CN + +L + RV AL +++M+ PN T N ++ C+ +++K EL
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERNGCSLSDDIYNLVLRLY 406
++DMER V+Y+ L+ + L+ M ++G + +N ++ +
Sbjct: 261 LQDMERL--GFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEP 466
+ K + EM+ P+ +Y +I+G+ + G + A R++ +M G+ +
Sbjct: 319 CRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI 378
Query: 467 RTEKLVI 473
T +I
Sbjct: 379 LTYNALI 385
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 7/271 (2%)
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
R+ D+ +N++++ + EA+ ++ ++ S+ P TYA I
Sbjct: 169 RKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLI 228
Query: 272 XXXXXXFRGMWNEGCNCKP-DVVICNCIIDALCFKK-RVPEALEVFQDMKERGCEPNVAT 329
M N + K V + N I+ L +K EA++VFQ MK C+P T
Sbjct: 229 ERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTET 288
Query: 330 YNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLER 386
YN +I K + ++L +M + C PN TY+ L+N+ E+ + E+
Sbjct: 289 YNLMINLYGKASKSYMSWKLYCEMRSHQ--CKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 387 MERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGK 446
++ +G +YN ++ Y + G + + M+ GC PDR SY IM+ + G
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 406
Query: 447 MKDAMRYFREMTSKGMVAEPRTEKLVISMNS 477
DA F EM G+ ++ L++S S
Sbjct: 407 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 437
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/434 (18%), Positives = 176/434 (40%), Gaps = 53/434 (12%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R W ++ W + S+ P N ++D G+ +++E ++ ++ +
Sbjct: 152 RLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPT 211
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLD---LDLDAFRTLLMWLCRYK-HVEDAE 204
EDT++ L++ + A +E A + + + + + + + L + K + E+A
Sbjct: 212 EDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAI 271
Query: 205 TLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWK---DIMASKCRPDLFTYATF 261
+F R+ + +T+N+++N + G A ++ WK ++ + +C+P++ TY
Sbjct: 272 DVFQRMKRD-RCKPTTETYNLMIN---LYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 327
Query: 262 IXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKER 321
+ F + +G +PDV + N ++++ A E+F M+
Sbjct: 328 VNAFAREGLCEKAEEIFEQLQEDGL--EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM 385
Query: 322 GCEPNVATYNSLI-----------------------------KHL------CKIRRMEKV 346
GCEP+ A+YN ++ H+ K R + K
Sbjct: 386 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKC 445
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLN---SLKGPEEVPGVLERMERNGCSLSDDIYNLVL 403
+V++M + P+ + +LN L ++ +L ME C+ YN+++
Sbjct: 446 EAIVKEMS--ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 503
Query: 404 RLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
+Y K + + + + E++ PD ++T I + + F EM G
Sbjct: 504 NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCA 563
Query: 464 AEPRTEKLVISMNS 477
+ T K+++S S
Sbjct: 564 PDGGTAKVLLSACS 577
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 108/269 (40%), Gaps = 5/269 (1%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
+ D P V N +++ + ++F M H + +++ ++ + A
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
+A ++F ++ G+ + + LL + + V E + + E + D N
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS-ENGVEPDTFVLNS 466
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
+LN + LG + +++ ++ C D+ TY I F + +
Sbjct: 467 MLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK- 525
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
N +PDVV I A KK + LEVF++M + GC P+ T L+ ++E+
Sbjct: 526 -NFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQ 584
Query: 346 VYELVEDMER--KKGSCMPNAVTYSCLLN 372
V ++ M + S +P + S +N
Sbjct: 585 VTSVLRTMHKGVTVSSLVPKLMAKSLTVN 613
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 7/271 (2%)
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
R+ D+ +N++++ + EA+ ++ ++ S+ P TYA I
Sbjct: 147 RKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLI 206
Query: 272 XXXXXXFRGMWNEGCNCKP-DVVICNCIIDALCFKK-RVPEALEVFQDMKERGCEPNVAT 329
M N + K V + N I+ L +K EA++VFQ MK C+P T
Sbjct: 207 ERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTET 266
Query: 330 YNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLER 386
YN +I K + ++L +M + C PN TY+ L+N+ E+ + E+
Sbjct: 267 YNLMINLYGKASKSYMSWKLYCEMRSHQ--CKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 387 MERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGK 446
++ +G +YN ++ Y + G + + M+ GC PDR SY IM+ + G
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 384
Query: 447 MKDAMRYFREMTSKGMVAEPRTEKLVISMNS 477
DA F EM G+ ++ L++S S
Sbjct: 385 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 415
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/431 (18%), Positives = 175/431 (40%), Gaps = 53/431 (12%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R W ++ W + S+ P N ++D G+ +++E ++ ++ +
Sbjct: 130 RLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPT 189
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLD---LDLDAFRTLLMWLCRYK-HVEDAE 204
EDT++ L++ + A +E A + + + + + + + L + K + E+A
Sbjct: 190 EDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAI 249
Query: 205 TLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWK---DIMASKCRPDLFTYATF 261
+F R+ + +T+N+++N + G A ++ WK ++ + +C+P++ TY
Sbjct: 250 DVFQRMKRD-RCKPTTETYNLMIN---LYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 305
Query: 262 IXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKER 321
+ F + +G +PDV + N ++++ A E+F M+
Sbjct: 306 VNAFAREGLCEKAEEIFEQLQEDGL--EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM 363
Query: 322 GCEPNVATYNSLI-----------------------------KHL------CKIRRMEKV 346
GCEP+ A+YN ++ H+ K R + K
Sbjct: 364 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKC 423
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLN---SLKGPEEVPGVLERMERNGCSLSDDIYNLVL 403
+V++M + P+ + +LN L ++ +L ME C+ YN+++
Sbjct: 424 EAIVKEM--SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 481
Query: 404 RLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
+Y K + + + + E++ PD ++T I + + F EM G
Sbjct: 482 NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCA 541
Query: 464 AEPRTEKLVIS 474
+ T K+++S
Sbjct: 542 PDGGTAKVLLS 552
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 108/269 (40%), Gaps = 5/269 (1%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
+ D P V N +++ + ++F M H + +++ ++ + A
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
+A ++F ++ G+ + + LL + + V E + + E + D N
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS-ENGVEPDTFVLNS 444
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
+LN + LG + +++ ++ C D+ TY I F + +
Sbjct: 445 MLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK- 503
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
N +PDVV I A KK + LEVF++M + GC P+ T L+ ++E+
Sbjct: 504 -NFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQ 562
Query: 346 VYELVEDMER--KKGSCMPNAVTYSCLLN 372
V ++ M + S +P + S +N
Sbjct: 563 VTSVLRTMHKGVTVSSLVPKLMAKSLTVN 591
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 153/373 (41%), Gaps = 14/373 (3%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEM---SHREGLVNEDTFS 153
AL F WA K Y P+ + D L + F + +F+EM S G ++ + ++
Sbjct: 188 ALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYN 247
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
+++ A A K+E A F ++ G +D + L+M A ++ S +
Sbjct: 248 QVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKT 307
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXX 273
L D T+ +I+ G A ++++ + K RP +++ +
Sbjct: 308 DSL-LDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDT 366
Query: 274 XXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSL 333
+ M +G +P + +ID+ ++ AL ++ +MK+ G PN Y +
Sbjct: 367 SMKVYMEM--QGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 334 IKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERN 390
I+ K ++E + +DME K +P TYSCLL G +V ++ M
Sbjct: 425 IESHAKSGKLEVAMTVFKDME--KAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNA 482
Query: 391 GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDR-RSYTIMIHGHYENGKMKD 449
G Y +L L D K EM+ G D S +MI + ++ +
Sbjct: 483 GLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMI--YIKDASVDL 540
Query: 450 AMRYFREMTSKGM 462
A+++ R M S G+
Sbjct: 541 ALKWLRFMGSSGI 553
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 146/316 (46%), Gaps = 9/316 (2%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
T++TL++ + ++EA ++ + G++ D+ + +L+ + + LF
Sbjct: 50 TYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEM 109
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVW-KDIMASKCRPDLFTYATFIXXXXXXX 269
L D+ ++N +++ + LG EA ++ +DI + P + TY +
Sbjct: 110 LHS-GLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSG 168
Query: 270 XXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVAT 329
F+ + + KP+++ N +I+ LC +RV + +++K+ G PN T
Sbjct: 169 HTDNAIELFKHLKSR---VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVT 225
Query: 330 YNSLIKHLCKIRRMEKVYELVEDMERKKGS--CMPNAVTYSCLLNSLKGPEEVPGVLERM 387
Y +++K K +R+EK +L M+++ + N S L+ + + EE + +
Sbjct: 226 YTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGR-AEEAYECMHEL 284
Query: 388 ERNGCSLSDDI-YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGK 446
R+G D + YN +L LY K N D + +E+E G PD ++TI+++G G
Sbjct: 285 VRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGN 344
Query: 447 MKDAMRYFREMTSKGM 462
A ++ + GM
Sbjct: 345 TGGAEKHLACIGEMGM 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 6/232 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N +++ L K R + + E+ N T++T+L+ + ++E+ + +
Sbjct: 186 PELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQL 245
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F ++ G D A ++ L + E+A H R +DI ++N +LN +
Sbjct: 246 FLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYF 305
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
GN + ++I +PD +T+ + + G +P
Sbjct: 306 KDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMG--MQPS 363
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRM 343
VV CNC+ID LC V A+ +F M+ R + TY S++ +LCK R+
Sbjct: 364 VVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDGRL 411
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 152/370 (41%), Gaps = 19/370 (5%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N ++ K + Q+FDEM H + +++TL+ + + EA +
Sbjct: 81 PDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKI 140
Query: 172 FYTREQF-GLDLDLDAFRTLLMWLCRYKHVEDAETLF-HSKAREFQLHRDIKTWNVILNG 229
+ GL +D + LL LC+ H ++A LF H K+R + ++ T+N+++NG
Sbjct: 141 LHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR---VKPELMTYNILING 197
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCK 289
C + +++ S P+ TY T + F M EG
Sbjct: 198 LCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFD 257
Query: 290 PDVVICNC-IIDALCFKKRVPEALEVFQDMKERGC-EPNVATYNSLIKHLCKIRRMEKVY 347
NC ++ AL R EA E ++ G ++ +YN+L+ K ++ V
Sbjct: 258 G---FANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVD 314
Query: 348 ELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGV---LERMERNGCSLSDDIYNLVLR 404
+L+E++E K P+ T++ ++N L G L + G S N ++
Sbjct: 315 DLLEEIEMK--GLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLID 372
Query: 405 LYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVA 464
K + D + + ME D +YT ++H ++G++ A + +KGM
Sbjct: 373 GLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKI 428
Query: 465 EPRTEKLVIS 474
+ V+S
Sbjct: 429 PSSARRAVLS 438
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 113/269 (42%), Gaps = 39/269 (14%)
Query: 194 LCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRP 253
LC+++++E AETL R + D+ T+N ++ G+ EA V + + + P
Sbjct: 23 LCKFRNLERAETLLIDGIR-LGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEP 81
Query: 254 DLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALE 313
D+ TY + I F M + G + PD+ N ++ R EA +
Sbjct: 82 DVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLS--PDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 314 VF-QDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLN 372
+ +D+ G P + TYN L+ LCK + EL + + K P +TY+ L+N
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL---KSRVKPELMTYNILIN 196
Query: 373 SLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRR 432
L V G ++ M R E++++G P+
Sbjct: 197 GLCKSRRV-GSVDWMMR-------------------------------ELKKSGYTPNAV 224
Query: 433 SYTIMIHGHYENGKMKDAMRYFREMTSKG 461
+YT M+ +++ +++ ++ F +M +G
Sbjct: 225 TYTTMLKMYFKTKRIEKGLQLFLKMKKEG 253
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 7/190 (3%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
PDV+ N +I + EA V + M+E G EP+V TYNSLI K + +V +L
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQL 105
Query: 350 VEDMERKKGSCMPNAVTY----SCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
++M S P+ +Y SC + E + E + G D YN++L
Sbjct: 106 FDEMLHSGLS--PDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDA 163
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
K + D + + + ++ P+ +Y I+I+G ++ ++ RE+ G
Sbjct: 164 LCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPN 222
Query: 466 PRTEKLVISM 475
T ++ M
Sbjct: 223 AVTYTTMLKM 232
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
K DVVI I+D LC A +F +M E+G PNV TYN +I C R +
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
L+ M K+ + P+ VT+S L+N+ + E + + M R + YN ++
Sbjct: 67 LLRHMIEKQIN--PDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDG 124
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
+ K D D ++ D M GC PD +++ +I+G+ + ++ + M F EM +G+VA
Sbjct: 125 FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Query: 466 PRTEKLVI 473
T +I
Sbjct: 185 TVTYTTLI 192
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 90/182 (49%), Gaps = 5/182 (2%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
P+V+ NC+ID+ C R +A ++ + M E+ P++ T+++LI K R++ + E+
Sbjct: 43 PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEI 102
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPG---VLERMERNGCSLSDDIYNLVLRLY 406
++M R S P +TY+ +++ + V +L+ M GCS ++ ++ Y
Sbjct: 103 YKEMLR--WSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGY 160
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEP 466
K D + + EM R G + +YT +IHG + G + A EM S G+ +
Sbjct: 161 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDY 220
Query: 467 RT 468
T
Sbjct: 221 IT 222
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 7/246 (2%)
Query: 215 QLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXX 274
+ D+ I++ C GN A+ ++ ++ P++ TY I
Sbjct: 5 HIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDA 64
Query: 275 XXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLI 334
R M + N PD+V + +I+A +++V EA E++++M P TYNS+I
Sbjct: 65 DQLLRHMIEKQIN--PDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 335 KHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERNG 391
CK R++ +++ M K C P+ VT+S L+N + V +E M R G
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASK--GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 392 CSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAM 451
+ Y ++ + + + D + +EM G PD ++ M+ G +++ A
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 452 RYFREM 457
++
Sbjct: 241 AILEDL 246
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 12/228 (5%)
Query: 168 AISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVIL 227
A ++F + G+ ++ + ++ C DA+ L E Q++ DI T++ ++
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMI-EKQINPDIVTFSALI 87
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCN 287
N + EA+ ++K+++ P TY + I M ++GC+
Sbjct: 88 NAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCS 147
Query: 288 CKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVY 347
PDVV + +I+ C KRV +E+F +M RG N TY +LI C++ ++
Sbjct: 148 --PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 205
Query: 348 ELVEDMERKKGSC--MPNAVTYSCLLNSLKGPEEVP---GVLERMERN 390
+L+ +M SC P+ +T+ C+L L +E+ +LE ++++
Sbjct: 206 DLLNEMI----SCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 107/252 (42%), Gaps = 8/252 (3%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
KAD T+ I+D L K +F EM + N T++ ++ F + +
Sbjct: 7 KADVVISTA-----IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRW 61
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
+A + + ++ D+ F L+ + + V +AE ++ R + + T+N
Sbjct: 62 SDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLR-WSIFPTTITYNS 120
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
+++G+C +AKR+ + + C PD+ T++T I F M G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
+ V +I C + A ++ +M G P+ T++ ++ LC + + K
Sbjct: 181 I--VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRK 238
Query: 346 VYELVEDMERKK 357
+ ++ED+++ +
Sbjct: 239 AFAILEDLQKSE 250
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 162/372 (43%), Gaps = 13/372 (3%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
+ P N LD+L + ++ Q F M R + +++ L+ A KV +A
Sbjct: 109 GFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDA 168
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+ ++ + G+ D A L++ LC + V+ A + + + ++ +N +++
Sbjct: 169 VEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALIS 228
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
G+C G +A+ + + C PDL TY + M G
Sbjct: 229 GFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSG--I 286
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVF--QDMKERG-CEPNVATYNSLIKHLCKIRRMEK 345
+ D N ++ C + P+ F ++M+ RG C+ V +Y++LI+ C+ K
Sbjct: 287 QLDAYSYNQLLKRHC-RVSHPDKCYNFMVKEMEPRGFCD--VVSYSTLIETFCRASNTRK 343
Query: 346 VYELVEDMERKKGSCMPNAVTYSCLLNSL--KGPEEVP-GVLERMERNGCSLSDDIYNLV 402
Y L E+M R+KG M N VTY+ L+ + +G V +L++M G S Y +
Sbjct: 344 AYRLFEEM-RQKGMVM-NVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401
Query: 403 LRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
L K N D +++M + PD SY +I G +G++ +A++ F +M K
Sbjct: 402 LDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKEC 461
Query: 463 VAEPRTEKLVIS 474
+ T K +I
Sbjct: 462 CPDELTFKFIIG 473
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 149/372 (40%), Gaps = 24/372 (6%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
A SR+ N L K + QVFDEM H V ++ + + E A +
Sbjct: 11 AYRSRIAN-----LVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEA 65
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+++ + G L + + LC+ K + + L S DI +NV L+
Sbjct: 66 IYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALL-SDMETLGFIPDIWAFNVYLDLL 124
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C A + + ++ PD+ +Y I + M G + P
Sbjct: 125 CRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVS--P 182
Query: 291 DVVICNCIIDALCFKKRVPEALE-VFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
D C ++ LC ++V A E V +++K + + YN+LI CK R+EK L
Sbjct: 183 DNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEAL 242
Query: 350 VEDMERKKGSCMPNAVTYSCLL------NSLKGPEEVPGVLERMERNGCSLSDDIYNLVL 403
M K C P+ VTY+ LL N LK E GV+ M R+G L YN +L
Sbjct: 243 KSYMS--KIGCEPDLVTYNVLLNYYYDNNMLKRAE---GVMAEMVRSGIQLDAYSYNQLL 297
Query: 404 RLYMKWDNQDGLRK-TWDEMERNG-CGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
+ + + + D EME G C D SY+ +I + A R F EM KG
Sbjct: 298 KRHCRVSHPDKCYNFMVKEMEPRGFC--DVVSYSTLIETFCRASNTRKAYRLFEEMRQKG 355
Query: 462 MVAEPRTEKLVI 473
MV T +I
Sbjct: 356 MVMNVVTYTSLI 367
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 128/283 (45%), Gaps = 11/283 (3%)
Query: 125 GKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDL 184
G++ + E L ++ LV T++ LL + + ++ A + + G+ LD
Sbjct: 234 GRIEKAEALKSYMSKIGCEPDLV---TYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDA 290
Query: 185 DAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWK 244
++ LL CR H + F K E + D+ +++ ++ +C N +A R+++
Sbjct: 291 YSYNQLLKRHCRVSHPDKCYN-FMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFE 349
Query: 245 DIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCF 304
++ ++ TY + I M G + PD + I+D LC
Sbjct: 350 EMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLS--PDRIFYTTILDHLCK 407
Query: 305 KKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNA 364
V +A VF DM E P+ +YNSLI LC+ R+ + +L EDM+ K+ C P+
Sbjct: 408 SGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKE--CCPDE 465
Query: 365 VTYSCLLNSLKGPEEVPG---VLERMERNGCSLSDDIYNLVLR 404
+T+ ++ L +++ V ++M G +L D+ + +++
Sbjct: 466 LTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIK 508
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 10/254 (3%)
Query: 225 VILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNE 284
V+++ + +G A +A + + CRPD+FTY + ++NE
Sbjct: 132 VLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAF---AVYNE 188
Query: 285 --GCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRR 342
CNC P++ ++D L K R +A ++F DM RG PN TY LI LC+
Sbjct: 189 MLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGS 248
Query: 343 MEKVYELVEDMERKKGSCMPNAVTYSCLLNS---LKGPEEVPGVLERMERNGCSLSDDIY 399
+ +L +M+ P++V ++ LL+ L E +L E++G L Y
Sbjct: 249 ADDARKLFYEMQTSGN--YPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGY 306
Query: 400 NLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
+ ++ + + + M + PD YTI+I G + GK++DA++ M S
Sbjct: 307 SSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPS 366
Query: 460 KGMVAEPRTEKLVI 473
KG+ + VI
Sbjct: 367 KGISPDTYCYNAVI 380
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 149/340 (43%), Gaps = 30/340 (8%)
Query: 131 EELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTL 190
++ ++F EM + + LL F ++ EA + E+ G L L + +L
Sbjct: 250 DDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSL 309
Query: 191 LMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASK 250
+ L R + A L+ + ++ + DI + +++ G G +A ++ + +
Sbjct: 310 IDGLFRARRYTQAFELYANMLKK-NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 251 CRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCK---------PDVVICNCIIDA 301
PD + Y I RG+ EG + + PD +I +
Sbjct: 369 ISPDTYCYNAVIKALCG-----------RGLLEEGRSLQLEMSETESFPDACTHTILICS 417
Query: 302 LCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCM 361
+C V EA E+F ++++ GC P+VAT+N+LI LCK +++ L+ ME + + +
Sbjct: 418 MCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASL 477
Query: 362 PNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSD-----DI--YNLVLRLYMKWDNQDG 414
+++S N G + + R+ +D DI YN+++ + + + DG
Sbjct: 478 FLRLSHSG--NRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDG 535
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYF 454
K + ++ G PD +Y +I+G + G+ ++A + F
Sbjct: 536 ALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 149/383 (38%), Gaps = 51/383 (13%)
Query: 136 VFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLC 195
V++EM N TF L+ + +A MF G+ + + L+ LC
Sbjct: 185 VYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLC 244
Query: 196 RYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDL 255
+ +DA LF+ + D N +L+G+C LG EA + + L
Sbjct: 245 QRGSADDARKLFYEMQTSGN-YPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGL 303
Query: 256 FTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVF 315
Y++ I + M + N KPD+++ +I L ++ +AL++
Sbjct: 304 RGYSSLIDGLFRARRYTQAFELYANMLKK--NIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 316 QDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL- 374
M +G P+ YN++IK LC +E+ L +E + P+A T++ L+ S+
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSL--QLEMSETESFPDACTHTILICSMC 419
Query: 375 --KGPEEVPGVLERMERNGCSLSDDIYNLVL-------------------------RLYM 407
E + +E++GCS S +N ++ L++
Sbjct: 420 RNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFL 479
Query: 408 KWDNQDGLRKTWDEMERN----------------GCGPDRRSYTIMIHGHYENGKMKDAM 451
+ + +++D M + G PD SY ++I+G G + A+
Sbjct: 480 RLSHSG--NRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGAL 537
Query: 452 RYFREMTSKGMVAEPRTEKLVIS 474
+ + KG+ + T +I+
Sbjct: 538 KLLNVLQLKGLSPDSVTYNTLIN 560
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 146/369 (39%), Gaps = 13/369 (3%)
Query: 101 FNWASKADSYAPTSRVC---NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLR 157
++AS +DS R+ N ++D+ GK R + +F EM ++ TF+T++
Sbjct: 289 LHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIH 348
Query: 158 RFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLH 217
+ EA S+ E+ G+ D + LL +E A ++ K R+ L
Sbjct: 349 TCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIE-AALEYYRKIRKVGLF 407
Query: 218 RDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXX 277
D T +L+ C E + V ++ + R D + +
Sbjct: 408 PDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKAL 467
Query: 278 FRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPN-VATYNSLIKH 336
F +C +ID K EA VF + + N V YN +IK
Sbjct: 468 FERFQ---LDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKA 524
Query: 337 LCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE---EVPGVLERMERNGCS 393
K + EK L + M K P+ TY+ L L G + E +L M +GC
Sbjct: 525 YGKAKLHEKALSLFKGM--KNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCK 582
Query: 394 LSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRY 453
Y ++ Y++ ++ ME+ G P+ Y +I+G E+G +++A++Y
Sbjct: 583 PGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQY 642
Query: 454 FREMTSKGM 462
FR M G+
Sbjct: 643 FRMMEEHGV 651
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 142/382 (37%), Gaps = 43/382 (11%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N ++ G E + +M + + T++ LL A A +E A+ + +
Sbjct: 344 NTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRK 403
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
GL D R +L LC+ K V + E + R + D + VI+ + G
Sbjct: 404 VGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRN-SIRIDEHSVPVIMQMYVNEGLVV 462
Query: 238 EAKRVWK-----------------DIMASKC------------------RPDLFTYATFI 262
+AK +++ D+ A K R D+ Y I
Sbjct: 463 QAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMI 522
Query: 263 XXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERG 322
F+GM N+G PD N + L V EA + +M + G
Sbjct: 523 KAYGKAKLHEKALSLFKGMKNQGT--WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSG 580
Query: 323 CEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EE 379
C+P TY ++I ++ + +L E ME K PN V Y L+N EE
Sbjct: 581 CKPGCKTYAAMIASYVRLGLLSDAVDLYEAME--KTGVKPNEVVYGSLINGFAESGMVEE 638
Query: 380 VPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIH 439
ME +G + + +++ Y K + R+ +D+M+ + GPD + M+
Sbjct: 639 AIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLS 698
Query: 440 GHYENGKMKDAMRYFREMTSKG 461
+ G + +A F + KG
Sbjct: 699 LCADLGIVSEAESIFNALREKG 720
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 158/407 (38%), Gaps = 53/407 (13%)
Query: 93 DWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTF 152
D + AL ++ K + P + +L IL + E+ V EM ++E +
Sbjct: 390 DIEAALEYYRKIRKVGLF-PDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSV 448
Query: 153 STLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVE---DAETLFHS 209
+++ + V +A ++F E+F LD L + TL + Y +AET+F+
Sbjct: 449 PVIMQMYVNEGLVVQAKALF---ERFQLDCVLSS-TTLAAVIDVYAEKGLWVEAETVFYG 504
Query: 210 KAREFQLHRDIKTWNVILNGW-------------------------CVLGN--------- 235
K D+ +NV++ + C +
Sbjct: 505 KRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVD 564
Query: 236 -AHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVI 294
EA+R+ +++ S C+P TYA I + M G KP+ V+
Sbjct: 565 LVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGV--KPNEVV 622
Query: 295 CNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRME---KVYELVE 351
+I+ V EA++ F+ M+E G + N SLIK K+ +E +VY+ ++
Sbjct: 623 YGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMK 682
Query: 352 DMERKKGSCMPNAVTYSCL-LNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWD 410
D E N++ C L + E + L E+ C + + ++ LY
Sbjct: 683 DSEGGPDVAASNSMLSLCADLGIVSEAESIFNALR--EKGTCDVIS--FATMMYLYKGMG 738
Query: 411 NQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
D + +EM +G D S+ ++ + +G++ + F EM
Sbjct: 739 MLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEM 785
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 153/390 (39%), Gaps = 48/390 (12%)
Query: 115 RVC-NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFY 173
RVC N D L K+ R EE ++ EM R + + ++TL+ + KV +A+ +
Sbjct: 388 RVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLID 447
Query: 174 TREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVL 233
G+ DL + L+ L R H E+ ++ E + T +VI+ G C
Sbjct: 448 EMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAV-TNSVIIEGLCFA 506
Query: 234 GNAHEAKRVWKDI-----------MASKCRPDLF--TYATFIXXXXXXXXXXXXXXXFRG 280
EA+ + + + C L Y F+ F
Sbjct: 507 RKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFF-S 565
Query: 281 MWNEGC--------------NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPN 326
+ EG +P +C +I A C V EA +F M ERG P+
Sbjct: 566 LCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPD 625
Query: 327 VATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS-LK---------- 375
+ TY +I C++ ++K L EDM+++ P+ VTY+ LL+ LK
Sbjct: 626 LFTYTIMIHTYCRLNELQKAESLFEDMKQR--GIKPDVVTYTVLLDRYLKLDPEHHETCS 683
Query: 376 -----GPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPD 430
G + VL G L Y +++ K +N + + +D M +G PD
Sbjct: 684 VQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPD 743
Query: 431 RRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
+YT +I ++ G + A+ E++ K
Sbjct: 744 MVAYTTLISSYFRKGYIDMAVTLVTELSKK 773
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 150/356 (42%), Gaps = 16/356 (4%)
Query: 108 DSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEE 167
D YA C ++D K E D+M + VN S +L+ + E
Sbjct: 317 DVYA-----CLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLE 371
Query: 168 AISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVIL 227
A+ F + LD + L + VE+A L + ++ + D+ + ++
Sbjct: 372 ALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQ-EMKDRGIVPDVINYTTLI 430
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCN 287
+G+C+ G +A + +++ + PDL TY + + M EG
Sbjct: 431 DGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGP- 489
Query: 288 CKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVY 347
KP+ V + II+ LCF ++V EA + F ++++ C N A++ +K C+ +K Y
Sbjct: 490 -KPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK-CPENKASF---VKGYCEAGLSKKAY 544
Query: 348 ELVEDMERKKGSCMPNAVTYS-CLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLY 406
+ +E + + +S C+ L E+ VL++M + ++ +
Sbjct: 545 KAFVRLEYPLRKSVYIKLFFSLCIEGYL---EKAHDVLKKMSAYRVEPGRSMCGKMIGAF 601
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
K +N + +D M G PD +YTIMIH + +++ A F +M +G+
Sbjct: 602 CKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGI 657
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 151/352 (42%), Gaps = 17/352 (4%)
Query: 115 RVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYT 174
+ CN +++ + + + L +F ++ NE T++ +++ +EEA +
Sbjct: 182 KACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE 241
Query: 175 REQ-FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKA-REFQLHRDIK-TWNVILNGWC 231
E FG ++T + LC E A L R++ D++ +++ G+C
Sbjct: 242 NESVFG-------YKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFC 294
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
A+ V ++ D++ I M +G K +
Sbjct: 295 NEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKG--LKVN 352
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
VI + I+ C EALE F++ ++ + YN L K+ R+E+ +EL++
Sbjct: 353 CVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQ 412
Query: 352 DMERKKGSCMPNAVTYSCLLNS--LKGP-EEVPGVLERMERNGCSLSDDIYNLVLRLYMK 408
+M K +P+ + Y+ L++ L+G + +++ M NG S YN+++ +
Sbjct: 413 EM--KDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLAR 470
Query: 409 WDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
+++ + + ++ M+ G P+ + +++I G K+K+A +F + K
Sbjct: 471 NGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK 522
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 132/363 (36%), Gaps = 46/363 (12%)
Query: 115 RVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYT 174
RV ++ + F+E V + + +V+ + L+ R K+ +++F
Sbjct: 147 RVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQ 206
Query: 175 REQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLG 234
+Q GL + + ++ LCR ++E+A L F + +NG CV G
Sbjct: 207 LKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVF-------GYKTFINGLCVTG 259
Query: 235 NAHEAKRVWKDIMASK--CRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDV 292
+A + +++ K DL + + E DV
Sbjct: 260 ETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVI-IEMEEIGFGLDV 318
Query: 293 VICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVED 352
C +ID C +PEAL M +G + N + +++ CK M+ E +E
Sbjct: 319 YACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCK---MDMCLEALEK 375
Query: 353 M-ERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDN 411
E + + + V Y+ ++L V E ++
Sbjct: 376 FKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQ----------------------- 412
Query: 412 QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKL 471
EM+ G PD +YT +I G+ GK+ DA+ EM GM + T +
Sbjct: 413 ---------EMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNV 463
Query: 472 VIS 474
++S
Sbjct: 464 LVS 466
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 107/505 (21%), Positives = 182/505 (36%), Gaps = 88/505 (17%)
Query: 2 AYHLGARRTTRILETLFPLNPNPVK---SIPPPLFTRRFLHSQPEHAAGAGAFVQNLLKF 58
++HL A T + E NP P SIPP L L P+H+ NL
Sbjct: 15 SHHLPAPITPPLPEIYRIPNPPPKLPEISIPPTLT----LSPSPKHSNFVNFLENNL--- 67
Query: 59 RRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASKADSYAPTSRVCN 118
P Q L GF R H FNWA+ D++
Sbjct: 68 ----PHHQTLTPQTLLGFLRSKI------RNHPLYAHYDFAVFNWAATLDTFRHDHDSFL 117
Query: 119 EILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQF 178
+ L RF++L+++ F AA+ + +F E
Sbjct: 118 WMSRSLAATHRFDDLYRLLS--------------------FVAANPCPCSSGIFSCPELE 157
Query: 179 GLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHE 238
+ FR+ + CR + ++ A F + R ++ +N ++NG+ G+ +
Sbjct: 158 PI------FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDK 211
Query: 239 AKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCI 298
A R ++ + + +PD+ T+ I FR M +G C+P+VV N +
Sbjct: 212 ALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKG--CEPNVVSFNTL 269
Query: 299 IDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKG 358
I ++ E +++ +M E GC + AT L+ LC+ R++ LV D+ K+
Sbjct: 270 IRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKR- 328
Query: 359 SCMPNAVTYSCLLNSLKG--------------------------------------PEEV 380
+P+ Y L+ L G E+
Sbjct: 329 -VLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKA 387
Query: 381 PGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHG 440
G +E+M G +NL+LR D+ + G PD +Y +++ G
Sbjct: 388 SGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSG 447
Query: 441 HYENGKMKDAMRYFREMTSKGMVAE 465
+ G+ K+ EM K M+ +
Sbjct: 448 FTKEGRRKEGEVLVNEMLDKDMLPD 472
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 111/283 (39%), Gaps = 6/283 (2%)
Query: 92 SDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDT 151
D AL F+ K + P N +++ + S+F+ +F EM + N +
Sbjct: 207 GDMDKALRFYQRMGK-ERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVS 265
Query: 152 FSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKA 211
F+TL+R F ++ K+EE + M Y + G L+ LCR V+DA L
Sbjct: 266 FNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLL 325
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
+ L + + ++ C A A + +++ P T +
Sbjct: 326 NKRVLPSEFD-YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRT 384
Query: 272 XXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYN 331
M N G PD V N ++ LC +A + +G EP+ TY+
Sbjct: 385 EKASGFMEKMMNAG--ILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYH 442
Query: 332 SLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL 374
L+ K R ++ LV +M K +P+ TY+ L++ L
Sbjct: 443 VLVSGFTKEGRRKEGEVLVNEMLDK--DMLPDIFTYNRLMDGL 483
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/381 (19%), Positives = 159/381 (41%), Gaps = 17/381 (4%)
Query: 93 DWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTF 152
+W+ + F SK P+ ++ G+ + F+ M R +
Sbjct: 293 NWQAVISAFEKISK-----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIY 347
Query: 153 STLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAR 212
++L+ +A ++EA+S ++ G+++ L + ++ + H E A+ F R
Sbjct: 348 TSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKR 407
Query: 213 EFQLHRDIKT--WNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
+H+ + + I+ C N A+ + +++ + Y T +
Sbjct: 408 ---IHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVAD 464
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
F+ + + C P VV C+I+ ++ +ALEV + MKE G + N+ TY
Sbjct: 465 EKKGLVVFKRL--KECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTY 522
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKG---PEEVPGVLERM 387
+ +I K++ + + EDM ++ P+ + Y+ ++++ G + ++ M
Sbjct: 523 SMMINGFVKLKDWANAFAVFEDMVKE--GMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
Query: 388 ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKM 447
++ + + ++ Y K + + +D M R GC P ++ +I+G E +M
Sbjct: 581 QKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQM 640
Query: 448 KDAMRYFREMTSKGMVAEPRT 468
+ A+ EMT G+ A T
Sbjct: 641 EKAVEILDEMTLAGVSANEHT 661
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 111/263 (42%), Gaps = 40/263 (15%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
PT N +++ L + + E+ ++ DEM+ NE T++ +++ +A+ +A
Sbjct: 622 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEY 681
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F + GLD+D+ + LL C+ ++ A + + + R+ +N++++GW
Sbjct: 682 FTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR-NIPRNSFVYNILIDGWA 740
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
G+ EA + + + +PD+ TY +FI C+ D
Sbjct: 741 RRGDVWEAADLIQQMKKEGVKPDIHTYTSFI---------------------SACSKAGD 779
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
+ A + ++M+ G +PN+ TY +LIK + EK E
Sbjct: 780 ----------------MNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYE 823
Query: 352 DMERKKGSCMPNAVTYSCLLNSL 374
+M K P+ Y CLL SL
Sbjct: 824 EM--KAMGIKPDKAVYHCLLTSL 844
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/393 (18%), Positives = 159/393 (40%), Gaps = 39/393 (9%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
+A PTSR+ ++ +E +M ++ T+S ++ F+ A
Sbjct: 336 RARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHA 395
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
E A F ++ L+ + ++ C+ ++E AE L E + I ++
Sbjct: 396 EAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEE-GIDAPIAIYHT 454
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
+++G+ ++ + + V+K + P + TY I R M EG
Sbjct: 455 MMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG 514
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
K ++ + +I+ K A VF+DM + G +P+V YN++I C + M++
Sbjct: 515 V--KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDR 572
Query: 346 VYELVEDMER------------------KKG---------------SCMPNAVTYSCLLN 372
+ V++M++ K G C+P T++ L+N
Sbjct: 573 AIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLIN 632
Query: 373 SL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGP 429
L + E+ +L+ M G S ++ Y +++ Y + + + ++ G
Sbjct: 633 GLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV 692
Query: 430 DRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
D +Y ++ ++G+M+ A+ +EM+++ +
Sbjct: 693 DIFTYEALLKACCKSGRMQSALAVTKEMSARNI 725
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 137/330 (41%), Gaps = 16/330 (4%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
T+ L+ + K+ +A+ + ++ G+ +L + ++ + K +A +F
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
+E + D+ +N I++ +C +GN A + K++ + RP T+ I
Sbjct: 546 VKE-GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
F M C C P V N +I+ L K+++ +A+E+ +M G N TY
Sbjct: 605 MRRSLEVFDMMRR--CGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTY 662
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLERM 387
+++ + K +E ++ + + TY LL + + V + M
Sbjct: 663 TKIMQGYASVGDTGKAFEYFTRLQNEGLDV--DIFTYEALLKACCKSGRMQSALAVTKEM 720
Query: 388 ERNGCSLSDDIYNLVLRLYMK----WDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYE 443
+ +YN+++ + + W+ D ++ +M++ G PD +YT I +
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQ----QMKKEGVKPDIHTYTSFISACSK 776
Query: 444 NGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
G M A + EM + G+ +T +I
Sbjct: 777 AGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 118/320 (36%), Gaps = 21/320 (6%)
Query: 93 DWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTF 152
DW A F K + P + N I+ M + Q EM TF
Sbjct: 534 DWANAFAVFEDMVK-EGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 153 STLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVE------DAETL 206
++ +A + + ++ +F + G + F L+ L + +E D TL
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 207 FHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXX 266
A E T+ I+ G+ +G+ +A + + D+FTY +
Sbjct: 653 AGVSANEH-------TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACC 705
Query: 267 XXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPN 326
+ M N + + N +ID + V EA ++ Q MK+ G +P+
Sbjct: 706 KSGRMQSALAVTKEM--SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPD 763
Query: 327 VATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS---LKGPEEVPGV 383
+ TY S I K M + + +E+ME PN TY+ L+ PE+
Sbjct: 764 IHTYTSFISACSKAGDMNRATQTIEEMEAL--GVKPNIKTYTTLIKGWARASLPEKALSC 821
Query: 384 LERMERNGCSLSDDIYNLVL 403
E M+ G +Y+ +L
Sbjct: 822 YEEMKAMGIKPDKAVYHCLL 841
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 130/296 (43%), Gaps = 9/296 (3%)
Query: 165 VEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWN 224
+++A +F + G+ + ++ L+ C + A LF K E + D+ ++
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLF-GKMLERDVVPDVDSYK 229
Query: 225 VILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNE 284
+++ G+C G + A + D++ PD +Y T + M +
Sbjct: 230 ILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLK 289
Query: 285 GCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRME 344
GCN PD+V N +I C + R +A +V DM GC PN +Y +LI LC +
Sbjct: 290 GCN--PDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFD 347
Query: 345 KVYELVEDMERKKGSCMPNAVTYSCLLN---SLKGPEEVPGVLERMERNGCSLSDDIYNL 401
+ + +E+M K S P+ +CL+ S EE V+E + +NG +L D + +
Sbjct: 348 EGKKYLEEMISKGFS--PHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEM 405
Query: 402 VLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIH-GHYENGKMKDAMRYFRE 456
V+ L D + ++ ++ + D R + I G Y + K++ + RE
Sbjct: 406 VIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGIGLGSYLSSKLQMKRKNARE 461
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 5/175 (2%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
P+ N ++ A C + A ++F M ER P+V +Y LI+ C+ ++ EL
Sbjct: 188 PNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMEL 247
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLY 406
++DM K +P+ ++Y+ LLNSL E +L RM+ GC+ YN ++ +
Sbjct: 248 LDDMLNK--GFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGF 305
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
+ D RK D+M NGC P+ SY +I G + G + +Y EM SKG
Sbjct: 306 CREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 115/263 (43%), Gaps = 4/263 (1%)
Query: 90 HRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNE 149
HR + A F +S+ P +R N ++ +Q+F +M R+ + +
Sbjct: 167 HRGYLQKAFELFK-SSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV 225
Query: 150 DTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS 209
D++ L++ F +V A+ + G D ++ TLL LCR + +A L
Sbjct: 226 DSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLL-C 284
Query: 210 KAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXX 269
+ + + D+ +N ++ G+C A +A++V D++++ C P+ +Y T I
Sbjct: 285 RMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQG 344
Query: 270 XXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVAT 329
M ++G + P + NC++ C +V EA +V + + + G + T
Sbjct: 345 MFDEGKKYLEEMISKGFS--PHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDT 402
Query: 330 YNSLIKHLCKIRRMEKVYELVED 352
+ +I +C EK+ +ED
Sbjct: 403 WEMVIPLICNEDESEKIKLFLED 425
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 161/390 (41%), Gaps = 46/390 (11%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDI-LGKMSRFEELHQVFDEMSHREGLVNE 149
+SD A F++AS+ ++ SR + IL + LG+ F + V + +
Sbjct: 61 QSDPLLAKEIFDYASQQPNFR-HSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTG 119
Query: 150 DTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYK-HVEDAETLFH 208
+ F+ L++ +A A E+ +S FY +F +L L ++ +++ A LF
Sbjct: 120 EIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFK 179
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXX 268
S +R + + +++N+++ +C+ + A +++ ++
Sbjct: 180 S-SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER------------------- 219
Query: 269 XXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVA 328
+ PDV +I C K +V A+E+ DM +G P+
Sbjct: 220 ------------------DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRL 261
Query: 329 TYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE---EVPGVLE 385
+Y +L+ LC+ ++ + Y+L+ M+ K C P+ V Y+ ++ + + VL+
Sbjct: 262 SYTTLLNSLCRKTQLREAYKLLCRMKLK--GCNPDLVHYNTMILGFCREDRAMDARKVLD 319
Query: 386 RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENG 445
M NGCS + Y ++ D +K +EM G P ++ G G
Sbjct: 320 DMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFG 379
Query: 446 KMKDAMRYFREMTSKGMVAEPRTEKLVISM 475
K+++A + G T ++VI +
Sbjct: 380 KVEEACDVVEVVMKNGETLHSDTWEMVIPL 409
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 152/356 (42%), Gaps = 11/356 (3%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLV-NEDTFSTLLRRFAAAHKVEEAISMFYTREQF 178
I+ LG F+EL QV + +V E F ++ F A+ MF Q+
Sbjct: 53 IITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQY 112
Query: 179 GLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHE 238
+ + +LL L + +E + S EF D T+N++++G G +
Sbjct: 113 RCQRTVKSLNSLLSALLKCGELEKMKERLSS-IDEFG-KPDACTYNILIHGCSQSGCFDD 170
Query: 239 AKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCI 298
A +++ +++ K +P T+ T I M + +P V I +
Sbjct: 171 ALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDML-KVYGVRPTVHIYASL 229
Query: 299 IDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKG 358
I ALC + A ++ + E + + A Y++LI L K R +V ++E+M K
Sbjct: 230 IKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEK-- 287
Query: 359 SCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGL 415
C P+ VTY+ L+N E VL+ M G YN++L ++ + +
Sbjct: 288 GCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEA 347
Query: 416 RKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKL 471
+++M R GC PD SY I+ G E + ++A EM KG +PR ++L
Sbjct: 348 TYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGY--KPRRDRL 401
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 134/317 (42%), Gaps = 12/317 (3%)
Query: 125 GKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDL 184
G++ + +E DE + T++ L+ + + ++A+ +F + +
Sbjct: 132 GELEKMKERLSSIDEFGKPDAC----TYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTG 187
Query: 185 DAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWK 244
F TL+ LC+ V++A + H + + + + + ++ C +G A ++
Sbjct: 188 VTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKD 247
Query: 245 DIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCF 304
+ K + D Y+T I M +GC KPD V N +I+ C
Sbjct: 248 EAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGC--KPDTVTYNVLINGFCV 305
Query: 305 KKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNA 364
+ A V +M E+G +P+V +YN ++ +I++ E+ L EDM R+ C P+
Sbjct: 306 ENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRR--GCSPDT 363
Query: 365 VTYSCLLNSL-KGP--EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDE 421
++Y + + L +G EE +L+ M G D L+ + + L K
Sbjct: 364 LSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISS 423
Query: 422 MERNGCGPDRRSYTIMI 438
+ R G D +++MI
Sbjct: 424 LHR-GIAGDADVWSVMI 439
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 142/354 (40%), Gaps = 8/354 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
+L + ++ + + E+ ++ F+ ++ F+ + +E+A+ ++ G
Sbjct: 86 LLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELG 145
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE--FQLHRDIKTWNVILNGWCVLGNAH 237
L+ + TL+ E + L E + +I+T+NV++ WC
Sbjct: 146 LNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVE 205
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
EA V K + RPD TY T KP+ C
Sbjct: 206 EAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGI 265
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
++ C + RV + L + MKE E N+ +NSLI ++ + + E++ M K+
Sbjct: 266 VVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLM--KE 323
Query: 358 GSCMPNAVTYSCLLNSLKGP---EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
+ + +TYS ++N+ E+ V + M + G Y+++ + Y++
Sbjct: 324 CNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKK 383
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRT 468
+ + + P+ +T +I G NG M DAMR F +M G+ +T
Sbjct: 384 AEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKT 436
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 218 RDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXX 277
R +++ ++N G HEA+ V+K + + RP L +Y T +
Sbjct: 43 RTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSI 102
Query: 278 FRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHL 337
+ G K D + N +I+A + +A++ MKE G P +TYN+LIK
Sbjct: 103 VSEVEQSG--TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY 160
Query: 338 CKIRRMEKVYELVEDM-ERKKGSCMPNAVTYSCLLNS---LKGPEEVPGVLERMERNGCS 393
+ E+ EL++ M E PN T++ L+ + K EE V+++ME G
Sbjct: 161 GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 394 LSDDIYNLVLRLYMKWDNQDGLRKTWDEME----RNGCGPDRRSYTIMIHGHYENGKMKD 449
YN + Y++ + +R + +E + P+ R+ I++ G+ G+++D
Sbjct: 221 PDTVTYNTIATCYVQ--KGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRD 278
Query: 450 AMRYFREMTSKGMVAEPRTEKLVISMNS 477
+R+ R M E R E ++ NS
Sbjct: 279 GLRFVRRM------KEMRVEANLVVFNS 300
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 148/359 (41%), Gaps = 50/359 (13%)
Query: 113 TSRVCNEILDILGKMSRFEELHQVFD---EMSHREGLVNEDTFSTLLRRFAAAHKVEEAI 169
T R +++++L + R E VF E HR L+ +++TLL +
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLI---SYTTLLAAMTVQKQYGSIS 100
Query: 170 SMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
S+ EQ G LD F ++ ++EDA K +E L+ T+N ++ G
Sbjct: 101 SIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALL-KMKELGLNPTTSTYNTLIKG 159
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCK 289
+ + G + + D+M + D+
Sbjct: 160 YGIAGKPERSSELL-DLMLEEGNVDV---------------------------------G 185
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKV--- 346
P++ N ++ A C KK+V EA EV + M+E G P+ TYN++ C +++ E V
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI--ATCYVQKGETVRAE 243
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVL---ERMERNGCSLSDDIYNLVL 403
E+VE M K+ PN T ++ V L RM+ + ++N ++
Sbjct: 244 SEVVEKMVMKE-KAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 404 RLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
+++ ++DG+ + M+ D +Y+ +++ G M+ A + F+EM G+
Sbjct: 303 NGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGV 361
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 114/266 (42%), Gaps = 9/266 (3%)
Query: 112 PTSRVCNEIL---DILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
PT+ N ++ I GK R EL + E + + N TF+ L++ + KVEEA
Sbjct: 148 PTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEA 207
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAET-LFHSKAREFQLHRDIKTWNVIL 227
+ E+ G+ D + T+ + AE+ + + + + +T +++
Sbjct: 208 WEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVV 267
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCN 287
G+C G + R + + + +L + + I M + CN
Sbjct: 268 GGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLM--KECN 325
Query: 288 CKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVY 347
K DV+ + +++A + +A +VF++M + G +P+ Y+ L K + + +K
Sbjct: 326 VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAE 385
Query: 348 ELVEDMERKKGSCMPNAVTYSCLLNS 373
EL+E + + PN V ++ +++
Sbjct: 386 ELLETLIVES---RPNVVIFTTVISG 408
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 124/287 (43%), Gaps = 44/287 (15%)
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
+ T++ LCR + +EDA LF + + + ++N I++G+C LG AK +
Sbjct: 189 TYSTVVDGLCRQQKLEDA-VLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 247
Query: 246 IMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFK 305
++ C P V N +I+ LC
Sbjct: 248 VLK-------------------------------------CGLVPSVYSHNILINGLCLV 270
Query: 306 KRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAV 365
+ EALE+ DM + G EP+ TYN L K + + +E++ DM K S P+ +
Sbjct: 271 GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLS--PDVI 328
Query: 366 TYSCLLNS---LKGPEEVPGVLERMERNGCSLSDDI-YNLVLRLYMKWDNQDGLRKTWDE 421
TY+ LL L + +L+ M G L+ I +++L K D +++
Sbjct: 329 TYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQ 388
Query: 422 MERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRT 468
M+ +G PD +Y+I+IHG + GK A+ + EM K ++ RT
Sbjct: 389 MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 151/358 (42%), Gaps = 21/358 (5%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
AL FN KAD +P + ++ L K+ +F+ ++DEM + L N T LL
Sbjct: 382 ALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQL 216
+ EA S+ + G LD+ + ++ + +E+A LF E +
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF-KVVIETGI 499
Query: 217 HRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXX 276
+ T+N ++ G+C N EA+++ I P + +Y T +
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 277 XFRGMWNEGCNCKPDVVICNCIIDALC-----------FKKRVPEAL-EVFQDMKERGCE 324
R M EG P V + I LC ++R+ E + +DM+ G
Sbjct: 560 LRREMKAEG--IPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 325 PNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVP 381
P+ TYN++I++LC+++ + + +E M+ + ++ TY+ L++SL +
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD--ASSATYNILIDSLCVYGYIRKAD 675
Query: 382 GVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIH 439
+ ++ SLS Y +++ + + + K + ++ G R Y+ +I+
Sbjct: 676 SFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 733
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 135/304 (44%), Gaps = 28/304 (9%)
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
+L LC+ +++A +LF+ + + L D+ ++++++G C LG A ++ ++
Sbjct: 368 VMLSGLCKTGRIDEALSLFN-QMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 249 SKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRV 308
+ P+ T+ + + + G D+V+ N +ID +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL--DIVLYNIVIDGYAKSGCI 484
Query: 309 PEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYS 368
EALE+F+ + E G P+VAT+NSLI CK + + + ++++ + K P+ V+Y+
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI--KLYGLAPSVVSYT 542
Query: 369 CLLNSLKGPEEVPGVLE---RMERNGCSLSDDIYNLVLR-LYMKWDNQD----------- 413
L+++ + E M+ G ++ Y+++ + L W +++
Sbjct: 543 TLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 602
Query: 414 ----GLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTE 469
GLR +ME G PD+ +Y +I + A + M S+ + A T
Sbjct: 603 KCKQGLR----DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
Query: 470 KLVI 473
++I
Sbjct: 659 NILI 662
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 124/287 (43%), Gaps = 44/287 (15%)
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
+ T++ LCR + +EDA LF + + + ++N I++G+C LG AK +
Sbjct: 189 TYSTVVDGLCRQQKLEDA-VLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 247
Query: 246 IMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFK 305
++ C P V N +I+ LC
Sbjct: 248 VLK-------------------------------------CGLVPSVYSHNILINGLCLV 270
Query: 306 KRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAV 365
+ EALE+ DM + G EP+ TYN L K + + +E++ DM K S P+ +
Sbjct: 271 GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLS--PDVI 328
Query: 366 TYSCLLNS---LKGPEEVPGVLERMERNGCSLSDDI-YNLVLRLYMKWDNQDGLRKTWDE 421
TY+ LL L + +L+ M G L+ I +++L K D +++
Sbjct: 329 TYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQ 388
Query: 422 MERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRT 468
M+ +G PD +Y+I+IHG + GK A+ + EM K ++ RT
Sbjct: 389 MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 151/358 (42%), Gaps = 21/358 (5%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
AL FN KAD +P + ++ L K+ +F+ ++DEM + L N T LL
Sbjct: 382 ALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQL 216
+ EA S+ + G LD+ + ++ + +E+A LF E +
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV-VIETGI 499
Query: 217 HRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXX 276
+ T+N ++ G+C N EA+++ I P + +Y T +
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 277 XFRGMWNEGCNCKPDVVICNCIIDALC-----------FKKRVPEAL-EVFQDMKERGCE 324
R M EG P V + I LC ++R+ E + +DM+ G
Sbjct: 560 LRREMKAEG--IPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 325 PNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVP 381
P+ TYN++I++LC+++ + + +E M+ + ++ TY+ L++SL +
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD--ASSATYNILIDSLCVYGYIRKAD 675
Query: 382 GVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIH 439
+ ++ SLS Y +++ + + + K + ++ G R Y+ +I+
Sbjct: 676 SFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 733
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 135/304 (44%), Gaps = 28/304 (9%)
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
+L LC+ +++A +LF+ + + L D+ ++++++G C LG A ++ ++
Sbjct: 368 VMLSGLCKTGRIDEALSLFN-QMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 249 SKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRV 308
+ P+ T+ + + + G D+V+ N +ID +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL--DIVLYNIVIDGYAKSGCI 484
Query: 309 PEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYS 368
EALE+F+ + E G P+VAT+NSLI CK + + + ++++ + K P+ V+Y+
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI--KLYGLAPSVVSYT 542
Query: 369 CLLNSLKGPEEVPGVLE---RMERNGCSLSDDIYNLVLR-LYMKWDNQD----------- 413
L+++ + E M+ G ++ Y+++ + L W +++
Sbjct: 543 TLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 602
Query: 414 ----GLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTE 469
GLR +ME G PD+ +Y +I + A + M S+ + A T
Sbjct: 603 KCKQGLR----DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
Query: 470 KLVI 473
++I
Sbjct: 659 NILI 662
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 131/311 (42%), Gaps = 9/311 (2%)
Query: 168 AISMFY-TREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
A+ FY + Q G D + T++ L R K L R+ + T+N +
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD-GCQPNTVTYNRL 405
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC 286
++ + +EA V+ + + C+PD TY T I ++ M G
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKV 346
+ PD + II+ L +P A ++F +M ++GC PN+ TYN ++ K R +
Sbjct: 466 S--PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLNSLKG---PEEVPGVLERMERNGCSLSDDIYNLVL 403
+L DM+ P+ VTYS ++ L EE V M++ + +Y L++
Sbjct: 524 LKLYRDMQ--NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 404 RLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
L+ K N + + + M G P+ + ++ K+ +A + M + G+
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLR 641
Query: 464 AEPRTEKLVIS 474
+T L++S
Sbjct: 642 PSLQTYTLLLS 652
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 149/361 (41%), Gaps = 42/361 (11%)
Query: 48 AGAFVQNLLK-FRRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASK 106
+G V+N+ RR + E AL G ++ +D+ AL FF W +
Sbjct: 298 SGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQ-MNDYGNALGFFYWLKR 356
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVE 166
+ ++ LG+ +F ++++ DEM N T++ L+ + A+ +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 167 EAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
EA+++F ++ G D + TL+ + ++ A ++ + + L D T++VI
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQ-RMQAGGLSPDTFTYSVI 475
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC 286
+N G+ A +++ +++ C P+L TY + +R M N G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG- 534
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKER------------------------- 321
+PD V + +++ L + EA VF +M+++
Sbjct: 535 -FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 322 ----------GCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLL 371
G PNV T NSL+ ++ ++ + YEL+++M P+ TY+ LL
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL--GLRPSLQTYTLLL 651
Query: 372 N 372
+
Sbjct: 652 S 652
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 7/225 (3%)
Query: 254 DLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALE 313
D TY T + M +GC +P+ V N +I + + EA+
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC--QPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 314 VFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS 373
VF M+E GC+P+ TY +LI K ++ ++ + M+ G P+ TYS ++N
Sbjct: 421 VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ--AGGLSPDTFTYSVIINC 478
Query: 374 LKGPEEVPGVLE---RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPD 430
L +P + M GC+ + YN+++ L+ K N K + +M+ G PD
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 431 RRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISM 475
+ +Y+I++ G +++A F EM K + + L++ +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 329 TYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE---EVPGVLE 385
TY +++ +L + ++ + +L+++M R C PN VTY+ L++S E V
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRD--GCQPNTVTYNRLIHSYGRANYLNEAMNVFN 423
Query: 386 RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENG 445
+M+ GC Y ++ ++ K D + M+ G PD +Y+++I+ + G
Sbjct: 424 QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Query: 446 KMKDAMRYFREMTSKGMVAEPRTEKLVISMNS 477
+ A + F EM +G T +++ +++
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 131/311 (42%), Gaps = 9/311 (2%)
Query: 168 AISMFY-TREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
A+ FY + Q G D + T++ L R K L R+ + T+N +
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD-GCQPNTVTYNRL 405
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC 286
++ + +EA V+ + + C+PD TY T I ++ M G
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKV 346
+ PD + II+ L +P A ++F +M ++GC PN+ TYN ++ K R +
Sbjct: 466 S--PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLNSLKG---PEEVPGVLERMERNGCSLSDDIYNLVL 403
+L DM+ P+ VTYS ++ L EE V M++ + +Y L++
Sbjct: 524 LKLYRDMQ--NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 404 RLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
L+ K N + + + M G P+ + ++ K+ +A + M + G+
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLR 641
Query: 464 AEPRTEKLVIS 474
+T L++S
Sbjct: 642 PSLQTYTLLLS 652
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 149/361 (41%), Gaps = 42/361 (11%)
Query: 48 AGAFVQNLLK-FRRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASK 106
+G V+N+ RR + E AL G ++ +D+ AL FF W +
Sbjct: 298 SGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQ-MNDYGNALGFFYWLKR 356
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVE 166
+ ++ LG+ +F ++++ DEM N T++ L+ + A+ +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 167 EAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
EA+++F ++ G D + TL+ + ++ A ++ + + L D T++VI
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQ-RMQAGGLSPDTFTYSVI 475
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC 286
+N G+ A +++ +++ C P+L TY + +R M N G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG- 534
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKER------------------------- 321
+PD V + +++ L + EA VF +M+++
Sbjct: 535 -FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 322 ----------GCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLL 371
G PNV T NSL+ ++ ++ + YEL+++M P+ TY+ LL
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL--GLRPSLQTYTLLL 651
Query: 372 N 372
+
Sbjct: 652 S 652
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 7/225 (3%)
Query: 254 DLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALE 313
D TY T + M +GC +P+ V N +I + + EA+
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC--QPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 314 VFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS 373
VF M+E GC+P+ TY +LI K ++ ++ + M+ G P+ TYS ++N
Sbjct: 421 VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ--AGGLSPDTFTYSVIINC 478
Query: 374 LKGPEEVPGVLE---RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPD 430
L +P + M GC+ + YN+++ L+ K N K + +M+ G PD
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 431 RRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISM 475
+ +Y+I++ G +++A F EM K + + L++ +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 329 TYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE---EVPGVLE 385
TY +++ +L + ++ + +L+++M R C PN VTY+ L++S E V
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRD--GCQPNTVTYNRLIHSYGRANYLNEAMNVFN 423
Query: 386 RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENG 445
+M+ GC Y ++ ++ K D + M+ G PD +Y+++I+ + G
Sbjct: 424 QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Query: 446 KMKDAMRYFREMTSKGMVAEPRTEKLVISMNS 477
+ A + F EM +G T +++ +++
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 131/311 (42%), Gaps = 9/311 (2%)
Query: 168 AISMFY-TREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
A+ FY + Q G D + T++ L R K L R+ + T+N +
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD-GCQPNTVTYNRL 405
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC 286
++ + +EA V+ + + C+PD TY T I ++ M G
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKV 346
+ PD + II+ L +P A ++F +M ++GC PN+ TYN ++ K R +
Sbjct: 466 S--PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLNSLKG---PEEVPGVLERMERNGCSLSDDIYNLVL 403
+L DM+ P+ VTYS ++ L EE V M++ + +Y L++
Sbjct: 524 LKLYRDMQ--NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 404 RLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
L+ K N + + + M G P+ + ++ K+ +A + M + G+
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLR 641
Query: 464 AEPRTEKLVIS 474
+T L++S
Sbjct: 642 PSLQTYTLLLS 652
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 149/361 (41%), Gaps = 42/361 (11%)
Query: 48 AGAFVQNLLK-FRRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASK 106
+G V+N+ RR + E AL G ++ +D+ AL FF W +
Sbjct: 298 SGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQ-MNDYGNALGFFYWLKR 356
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVE 166
+ ++ LG+ +F ++++ DEM N T++ L+ + A+ +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 167 EAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
EA+++F ++ G D + TL+ + ++ A ++ + + L D T++VI
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQ-RMQAGGLSPDTFTYSVI 475
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC 286
+N G+ A +++ +++ C P+L TY + +R M N G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG- 534
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKER------------------------- 321
+PD V + +++ L + EA VF +M+++
Sbjct: 535 -FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 322 ----------GCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLL 371
G PNV T NSL+ ++ ++ + YEL+++M P+ TY+ LL
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL--GLRPSLQTYTLLL 651
Query: 372 N 372
+
Sbjct: 652 S 652
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 7/225 (3%)
Query: 254 DLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALE 313
D TY T + M +GC +P+ V N +I + + EA+
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC--QPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 314 VFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS 373
VF M+E GC+P+ TY +LI K ++ ++ + M+ G P+ TYS ++N
Sbjct: 421 VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ--AGGLSPDTFTYSVIINC 478
Query: 374 LKGPEEVPGVLE---RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPD 430
L +P + M GC+ + YN+++ L+ K N K + +M+ G PD
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 431 RRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISM 475
+ +Y+I++ G +++A F EM K + + L++ +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 329 TYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE---EVPGVLE 385
TY +++ +L + ++ + +L+++M R C PN VTY+ L++S E V
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRD--GCQPNTVTYNRLIHSYGRANYLNEAMNVFN 423
Query: 386 RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENG 445
+M+ GC Y ++ ++ K D + M+ G PD +Y+++I+ + G
Sbjct: 424 QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Query: 446 KMKDAMRYFREMTSKGMVAEPRTEKLVISMNS 477
+ A + F EM +G T +++ +++
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 152/389 (39%), Gaps = 46/389 (11%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
PT N +LD K E + +++ EM R +E T++ L+ F+ K+EEA
Sbjct: 236 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 295
Query: 172 FYTREQFGLDLDLDAFRTLL-----------MW------------------------LCR 196
+ G + +F L+ W LC
Sbjct: 296 HGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 355
Query: 197 YKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLF 256
+ ++DA L S A D+ ++N +++G+ +G EA ++ D+ A P +
Sbjct: 356 FGRIDDARELLSSMAAP-----DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIV 410
Query: 257 TYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQ 316
TY T I M + PDV+ ++ + A EV+
Sbjct: 411 TYNTLIDGLCESGNLEGAQRLKEEMTTQLIF--PDVITYTTLVKGFVKNGNLSMATEVYD 468
Query: 317 DMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKG 376
+M +G +P+ Y + ++ +K + L E+M P+ Y+ ++ L
Sbjct: 469 EMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA-PDLTIYNVRIDGLCK 527
Query: 377 PEEVPGVLE---RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRS 433
+ +E ++ R G Y V+R Y++ R +DEM R P +
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVIT 587
Query: 434 YTIMIHGHYENGKMKDAMRYFREMTSKGM 462
Y ++I+GH + G+++ A +Y EM +G+
Sbjct: 588 YFVLIYGHAKAGRLEQAFQYSTEMKKRGV 616
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 153/362 (42%), Gaps = 11/362 (3%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
PT+ N + L R ++ ++ M+ + + +++TL+ + K EA +
Sbjct: 341 PTTSTYNIYICALCDFGRIDDARELLSSMAAPDVV----SYNTLMHGYIKMGKFVEASLL 396
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F + + + TL+ LC ++E A+ L + + D+ T+ ++ G+
Sbjct: 397 FDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL-IFPDVITYTTLVKGFV 455
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
GN A V+ +++ +PD + Y T M + PD
Sbjct: 456 KNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA-PD 514
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
+ I N ID LC + +A+E + + G P+ TY ++I+ + + + L +
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574
Query: 352 DMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERNGCSLSDDIYNLVLRLYMK 408
+M RK+ P+ +TY L+ + + M++ G + +N +L K
Sbjct: 575 EMLRKR--LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 632
Query: 409 WDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRT 468
N D + +ME G P++ SYT++I + + K ++ ++ ++EM K + + T
Sbjct: 633 AGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
Query: 469 EK 470
+
Sbjct: 693 HR 694
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 131/351 (37%), Gaps = 41/351 (11%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
+ P+ R CN +L +L + V++ M + TF+T+L A +E
Sbjct: 198 GFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERV 257
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
++ ++ ++ + L+ + +E+A FH R ++N ++
Sbjct: 258 DKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARR-FHGDMRRSGFAVTPYSFNPLIE 316
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
G+C G +A V +++ + P TY +I M
Sbjct: 317 GYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM------A 370
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
PDVV N ++ + EA +F D++ P++ TYN+LI LC+ +E
Sbjct: 371 APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR 430
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMK 408
L E+M + P+ +TY+ L +KG ++K
Sbjct: 431 LKEEMTTQ--LIFPDVITYTTL---VKG-----------------------------FVK 456
Query: 409 WDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
N + +DEM R G PD +YT G G A R EM +
Sbjct: 457 NGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVA 507
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 112/267 (41%), Gaps = 4/267 (1%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
+A P+ N ++D L + E ++ +EM+ + + T++TL++ F +
Sbjct: 401 RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNL 460
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
A ++ + G+ D A+ T + R + A L D+ +NV
Sbjct: 461 SMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNV 520
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
++G C +GN +A + I PD TY T I + M +
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK- 579
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
P V+ +I R+ +A + +MK+RG PNV T+N+L+ +CK +++
Sbjct: 580 -RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDE 638
Query: 346 VYELVEDMERKKGSCMPNAVTYSCLLN 372
Y + ME + PN +Y+ L++
Sbjct: 639 AYRYLCKMEEE--GIPPNKYSYTMLIS 663
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 5/178 (2%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
P V CN ++ L + + +A V++ M E G P V T+N+++ K +E+V ++
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKI 260
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLERMERNGCSLSDDIYNLVLRLY 406
+M+R+ + + VTY+ L+N EE M R+G +++ +N ++ Y
Sbjct: 261 WLEMKRR--NIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGY 318
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVA 464
K D DEM G P +Y I I + G++ DA M + +V+
Sbjct: 319 CKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVS 376
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 6/173 (3%)
Query: 305 KKRVPEA-LEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPN 363
KK + E L F+ M +G P+V N ++K L R M K + E M + MP
Sbjct: 180 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETM--IEHGIMPT 237
Query: 364 AVTYSCLLNS---LKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWD 420
+T++ +L+S E V + M+R S+ YN+++ + K + R+
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 421 EMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
+M R+G S+ +I G+ + G DA EM + G+ T + I
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYI 350
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 158/374 (42%), Gaps = 27/374 (7%)
Query: 112 PTSRVCNEILDILGKMSR-FEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
P + C ++ L K R +E+ ++F++MS + ++D F L++ F EEA+
Sbjct: 306 PDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALV 365
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ E+ G+ + + TL+ + H+E+ E LF ++ R+ L T+N++++ +
Sbjct: 366 IQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLF-TEMRDKGLKPSAATYNILMDAY 424
Query: 231 CVLGNAHEAKRVWKDIMASKCR--------PDLFTYATFIXXXXXXXXXXXXXX-XFRGM 281
A+R+ DI+ + R P++ +Y I F M
Sbjct: 425 --------ARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRM 476
Query: 282 WNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIR 341
G KP +I A +A F++M + G +P+V TY S++ +
Sbjct: 477 KKVGL--KPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSG 534
Query: 342 RMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE---EVPGVLERMERNGCSLSDDI 398
K+ E+ + M R+K +TY+ LL+ E V+ + G S
Sbjct: 535 DTGKLMEIWKLMLREK--IKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMT 592
Query: 399 YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMT 458
YN+++ Y + L + EM PD +Y+ MI+ K A Y + M
Sbjct: 593 YNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMV 652
Query: 459 SKGMVAEPRT-EKL 471
G V +PR+ EKL
Sbjct: 653 KSGQVPDPRSYEKL 666
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 9/279 (3%)
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
++L L + + D L S + + RD++ +N ++G +A V++ +
Sbjct: 242 SVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDK 301
Query: 249 SKCRPDLFTYATFIXXXXXXXXXXXXX-XXFRGMWNEGCNCKPDVVICNCIIDALCFKKR 307
PD T A I F M +G DV ++ + C +
Sbjct: 302 INVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVF--GGLVKSFCDEGL 359
Query: 308 VPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTY 367
EAL + +M+++G N YN+L+ K +E+V L +M R KG P+A TY
Sbjct: 360 KEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEM-RDKG-LKPSAATY 417
Query: 368 SCLLNSLK---GPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDN-QDGLRKTWDEME 423
+ L+++ P+ V +L ME G + Y ++ Y + D + M+
Sbjct: 418 NILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMK 477
Query: 424 RNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
+ G P SYT +IH + +G + A F EM +G+
Sbjct: 478 KVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGI 516
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/374 (18%), Positives = 150/374 (40%), Gaps = 12/374 (3%)
Query: 95 KPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFST 154
K L F+ W S + + R C+ + +LG+ + + + + +E + ++
Sbjct: 219 KSCLYFYEWMSLQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNA 278
Query: 155 LLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREF 214
+ +A+ + ++A ++ ++ + D L+ L + K E
Sbjct: 279 AISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEK 338
Query: 215 QLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXX 274
+ + ++ +C G EA + ++ R + Y T +
Sbjct: 339 GVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEV 398
Query: 275 XXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALE-VFQDMKERGCEPNVATYNSL 333
F M ++G KP N ++DA ++ P+ +E + ++M++ G EPNV +Y L
Sbjct: 399 EGLFTEMRDKG--LKPSAATYNILMDAYA-RRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 334 IKHLCKIRRMEKVYELVED--MERKKGSCMPNAVTYSCLLN--SLKG-PEEVPGVLERME 388
I + ++M ++ D + KK P++ +Y+ L++ S+ G E+ E M
Sbjct: 456 ISAYGRTKKMS---DMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMC 512
Query: 389 RNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMK 448
+ G S + Y VL + + + L + W M R R +Y ++ G + G
Sbjct: 513 KEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYI 572
Query: 449 DAMRYFREMTSKGM 462
+A E + G+
Sbjct: 573 EARDVVSEFSKMGL 586
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 6/188 (3%)
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK-VYEL 349
DV + N I L +R +A EV++ M + P+ T LI L K R K V+E+
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSL--KGPEEVPGVLE-RMERNGCSLSDDIYNLVLRLY 406
E M +KG V + L+ S +G +E V++ ME+ G + +YN ++ Y
Sbjct: 332 FEKMS-EKGVKWSQDV-FGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEP 466
K ++ + + + EM G P +Y I++ + + REM G+
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449
Query: 467 RTEKLVIS 474
++ +IS
Sbjct: 450 KSYTCLIS 457
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 161/393 (40%), Gaps = 27/393 (6%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
AL FF W ++ +++ +LG++S+ + +M + +ED F L+
Sbjct: 133 ALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLI 192
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQL 216
+ A V+E++ +F + G++ + ++ +L + R A+ F+ E +
Sbjct: 193 ESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSE-GV 251
Query: 217 HRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXX 276
T+N++L G+ + A R ++D+ PD T+ T I
Sbjct: 252 EPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEK 311
Query: 277 XFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKH 336
F M +G P VV +I RV + L +F++M+ G EPN TY++L+
Sbjct: 312 LFVEM--KGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPG 369
Query: 337 LCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPG--VLERME------ 388
LC +M + ++++M K + N++ L++ K + VL+ M
Sbjct: 370 LCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPA 429
Query: 389 ---------RNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIH 439
N C S YN ++L ++ + + D +E + +Y +I
Sbjct: 430 EAGHYGVLIENQCKAS--AYNRAIKLLDTLIEKEIILRHQDTLEM-----EPSAYNPIIE 482
Query: 440 GHYENGKMKDAMRYFREMTSKGMVAEPRTEKLV 472
NG+ A FR++ +G+ + L+
Sbjct: 483 YLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLI 515
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/373 (18%), Positives = 148/373 (39%), Gaps = 18/373 (4%)
Query: 113 TSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMF 172
T + N + ++ + R+ + F++M T++ +L F + ++E A+ F
Sbjct: 219 TIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFF 278
Query: 173 YTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCV 232
+ G+ D F T++ CR+K +++AE LF + + ++ + ++ ++ G+
Sbjct: 279 EDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLF-VEMKGNKIGPSVVSYTTMIKGYLA 337
Query: 233 LGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDV 292
+ + R+++++ +S P+ TY+T + + M + K +
Sbjct: 338 VDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNS 397
Query: 293 VICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVED 352
+ ++ + + A EV + M Y LI++ CK + +L++
Sbjct: 398 IFLKLLV-SQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDT 456
Query: 353 MERKK------------GSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYN 400
+ K+ S + Y C N EV + ++ + G D + N
Sbjct: 457 LIEKEIILRHQDTLEMEPSAYNPIIEYLCN-NGQTAKAEV--LFRQLMKRGVQDQDALNN 513
Query: 401 LVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
L+ R + K N D + M R G + +Y ++I + G+ DA M
Sbjct: 514 LI-RGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVED 572
Query: 461 GMVAEPRTEKLVI 473
G V + + VI
Sbjct: 573 GHVPDSSLFRSVI 585
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 158/385 (41%), Gaps = 55/385 (14%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
PT N +++ L ++ ++ + H+ + + +++++ F AA ++ A
Sbjct: 499 PTYVTHNMVIEGLIDAGELDKAEAFYESLEHK----SRENDASMVKGFCAAGCLDHAFER 554
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYK-HVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
F E L + TL LC K ++ A+ L + + + + + ++ W
Sbjct: 555 FIRLE---FPLPKSVYFTLFTSLCAEKDYISKAQDLL-DRMWKLGVEPEKSMYGKLIGAW 610
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C + N +A+ ++ ++ K PDLFTY I F M + KP
Sbjct: 611 CRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRR--DVKP 668
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
DVV + ++++ PE L++ ++M+ P+V Y +I C + ++KVY L
Sbjct: 669 DVVTYSVLLNS------DPE-LDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALF 721
Query: 351 EDMERKKGSCMPNAVTYSCLLNSLKGPE-------------------------------- 378
+DM+R++ +P+ VTY+ LL + PE
Sbjct: 722 KDMKRRE--IVPDVVTYTVLLKN--KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDL 777
Query: 379 -EVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIM 437
E + ++M +G Y ++ K + +D M +G PD YT +
Sbjct: 778 GEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTAL 837
Query: 438 IHGHYENGKMKDAMRYFREMTSKGM 462
I G NG + A++ +EM KG+
Sbjct: 838 IAGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 128/322 (39%), Gaps = 35/322 (10%)
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
++L C+ + +A LF + RE + D +NV + LG EA +++++
Sbjct: 366 SILQCYCQMGNFSEAYDLFK-EFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTG 424
Query: 249 SKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRV 308
PD+ Y T I M +G PD+VI N + L
Sbjct: 425 KGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEM--DGTGKTPDIVIYNVLAGGLATNGLA 482
Query: 309 PEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK---------KGS 359
EA E + M+ RG +P T+N +I+ L ++K E +E K KG
Sbjct: 483 QEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGF 542
Query: 360 C------------------MPNAVTYSCLLNSLKGPEE----VPGVLERMERNGCSLSDD 397
C +P +V Y L SL ++ +L+RM + G
Sbjct: 543 CAAGCLDHAFERFIRLEFPLPKSV-YFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKS 601
Query: 398 IYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
+Y ++ + + +N R+ ++ + PD +YTIMI+ + + K A F +M
Sbjct: 602 MYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDM 661
Query: 458 TSKGMVAEPRTEKLVISMNSPL 479
+ + + T ++++ + L
Sbjct: 662 KRRDVKPDVVTYSVLLNSDPEL 683
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 146/393 (37%), Gaps = 41/393 (10%)
Query: 116 VCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTR 175
+ + IL +M F E + +F E ++ ++ KVEEAI +F
Sbjct: 363 IVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREM 422
Query: 176 EQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGN 235
G+ D+ + TL+ C DA L + DI +NV+ G G
Sbjct: 423 TGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTP-DIVIYNVLAGGLATNGL 481
Query: 236 AHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVIC 295
A EA K + +P T+ I + + ++ +V
Sbjct: 482 AQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKG 541
Query: 296 NC--------------------------IIDALCFKK-RVPEALEVFQDMKERGCEPNVA 328
C + +LC +K + +A ++ M + G EP +
Sbjct: 542 FCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKS 601
Query: 329 TYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS---LKGPEEVPGVLE 385
Y LI C++ + K E E + KK +P+ TY+ ++N+ L P++ + E
Sbjct: 602 MYGKLIGAWCRVNNVRKAREFFEILVTKK--IVPDLFTYTIMINTYCRLNEPKQAYALFE 659
Query: 386 RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENG 445
M+R Y+++L N D EME PD YTIMI+ +
Sbjct: 660 DMKRRDVKPDVVTYSVLL-------NSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLN 712
Query: 446 KMKDAMRYFREMTSKGMVAEPRTEKLVISMNSP 478
+K F++M + +V + T +++ N P
Sbjct: 713 DLKKVYALFKDMKRREIVPDVVTYTVLLK-NKP 744
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 122/314 (38%), Gaps = 7/314 (2%)
Query: 153 STLLRRFAAAHKVEEAISMFY-TREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKA 211
+ L++ +A +EAI +F+ G D+ A L+ + D F +
Sbjct: 150 TALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGR-SDMVVGFFWEI 208
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
L D T+ +++ + E +++ ++ S+ R Y FI
Sbjct: 209 ERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMT 268
Query: 272 XXXXXXFRGMWNEGCNC-KPDVVIC-NCIIDALCFKKRVPEALEVFQDMKERGCEPNVAT 329
+ + + K D+ I ++ LC++ R+ +A V DM++ G +P+V
Sbjct: 269 DIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYV 328
Query: 330 YNSLIKHLCKIRRMEKVYELVEDM--ERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERM 387
Y+++I+ K + K ++ M +RK+ +C+ + C + E + +
Sbjct: 329 YSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQ-MGNFSEAYDLFKEF 387
Query: 388 ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKM 447
SL YN+ K + + + EM G PD +YT +I G GK
Sbjct: 388 RETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKC 447
Query: 448 KDAMRYFREMTSKG 461
DA EM G
Sbjct: 448 SDAFDLMIEMDGTG 461
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
+ F + D+ + V+++ C +G+ EAKR++ ++ S PD Y I
Sbjct: 753 KAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYL 812
Query: 272 XXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYN 331
F M G KPDVV +I C V +A+++ ++M E+G +P A+ +
Sbjct: 813 KEAKMIFDRMIESGV--KPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLS 870
Query: 332 SLIKHLCKIR 341
++ H K++
Sbjct: 871 AV--HYAKLK 878
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 6/246 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTR-EQF 178
I+ + G E H++FDEM +F+ LL + + K++EA+ F E+
Sbjct: 128 IMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 179 GLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHE 238
G+ DL + T++ LCR ++D ++F + D+ ++N +L + E
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKN-GFEPDLISFNTLLEEFYRRELFVE 246
Query: 239 AKRVWKDIMASK-CRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
R+W D+M SK P++ +Y + + M EG + PDV N
Sbjct: 247 GDRIW-DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGIS--PDVHTYNA 303
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
+I A + E ++ + +MKE+G P+ TY LI LCK +++ E+ E+ + K
Sbjct: 304 LITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHK 363
Query: 358 GSCMPN 363
PN
Sbjct: 364 LLSRPN 369
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 140/329 (42%), Gaps = 50/329 (15%)
Query: 152 FSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHV-EDAETLFHSK 210
+S +RR A K + +++F D+ + F +M L Y + E A LF +
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFD-DIKSEDFVIRIMLLYGYSGMAEHAHKLFD-E 147
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
E R +K++N +L+ + EA + +K++
Sbjct: 148 MPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKEL------------------------ 183
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
E PD+V N +I ALC K + + L +F+++++ G EP++ ++
Sbjct: 184 ------------PEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISF 231
Query: 331 NSLIKHLCK---IRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVL 384
N+L++ + +++++L+ K + PN +Y+ + L K + ++
Sbjct: 232 NTLLEEFYRRELFVEGDRIWDLM-----KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLI 286
Query: 385 ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYEN 444
+ M+ G S YN ++ Y +N + + K ++EM+ G PD +Y ++I +
Sbjct: 287 DVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKK 346
Query: 445 GKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
G + A+ E +++ P K V+
Sbjct: 347 GDLDRAVEVSEEAIKHKLLSRPNMYKPVV 375
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 94/193 (48%), Gaps = 6/193 (3%)
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKER-GCEPNVATYNSLIKHLCKIRRMEK 345
NC+ V N ++ A K++ EA++ F+++ E+ G P++ TYN++IK LC+ M+
Sbjct: 152 NCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDD 211
Query: 346 VYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE---EVPGVLERMERNGCSLSDDIYNLV 402
+ + E++E K P+ ++++ LL E E + + M+ S + YN
Sbjct: 212 ILSIFEELE--KNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSR 269
Query: 403 LRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
+R + D M+ G PD +Y +I + + +++ M+ + EM KG+
Sbjct: 270 VRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGL 329
Query: 463 VAEPRTEKLVISM 475
+ T ++I +
Sbjct: 330 TPDTVTYCMLIPL 342
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 103/243 (42%), Gaps = 5/243 (2%)
Query: 129 RFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFR 188
+F + +V + + +ED ++ + + E A +F + + + +F
Sbjct: 102 KFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFN 161
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
LL K +++A F + + D+ T+N ++ C G+ + +++++
Sbjct: 162 ALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEK 221
Query: 249 SKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRV 308
+ PDL ++ T + + M ++ N P++ N + L K+
Sbjct: 222 NGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSK--NLSPNIRSYNSRVRGLTRNKKF 279
Query: 309 PEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYS 368
+AL + MK G P+V TYN+LI +E+V + +M+ K P+ VTY
Sbjct: 280 TDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEK--GLTPDTVTY- 336
Query: 369 CLL 371
C+L
Sbjct: 337 CML 339
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 132/324 (40%), Gaps = 16/324 (4%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
+ +L L S +E Q ++ R + + TF+ + H + E +F
Sbjct: 324 DAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVS 383
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G+ + + L+ L + + + + L + ++N +++ C
Sbjct: 384 RGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVD-GLLSSVYSYNAVIDCLCKARRIE 442
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
A ++ P+L T+ TF+ + G KPDV+ +
Sbjct: 443 NAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGF--KPDVITFSL 500
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
II+ LC K + +A + F++M E G EPN TYN LI+ C ++ +L M K+
Sbjct: 501 IINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKM--KE 558
Query: 358 GSCMPNAVTYS------CLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDN 411
P+ Y+ C + +K EE +L+ M R G + Y+ +++ +
Sbjct: 559 NGLSPDLYAYNATIQSFCKMRKVKKAEE---LLKTMLRIGLKPDNFTYSTLIKALSESGR 615
Query: 412 QDGLRKTWDEMERNGCGPDRRSYT 435
+ R+ + +ER+GC PD SYT
Sbjct: 616 ESEAREMFSSIERHGCVPD--SYT 637
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 106/258 (41%), Gaps = 7/258 (2%)
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXF 278
D T+N ++ + E R++ ++ +P Y +
Sbjct: 354 DSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYL 413
Query: 279 RGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLC 338
+ M +G V N +ID LC +R+ A +M++RG PN+ T+N+ +
Sbjct: 414 KQMGVDGL--LSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYS 471
Query: 339 KIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERNGCSLS 395
++KV+ ++E + P+ +T+S ++N L +E+ + M G +
Sbjct: 472 VRGDVKKVHGVLEKLLVH--GFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 396 DDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFR 455
+ YN+++R + D K + +M+ NG PD +Y I + K+K A +
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLK 589
Query: 456 EMTSKGMVAEPRTEKLVI 473
M G+ + T +I
Sbjct: 590 TMLRIGLKPDNFTYSTLI 607
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 103/287 (35%), Gaps = 42/287 (14%)
Query: 225 VILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNE 284
V++ W LG A V+ I +P Y I F+ M ++
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 285 GCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRME 344
GC KPD N +I +C K V EA+ + + M++ G PNV TY LI R++
Sbjct: 210 GC--KPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVD 267
Query: 345 KVYELVEDMERKKGS---------------CMP-----------------------NAVT 366
+ + +E M +K + C+P +AV
Sbjct: 268 EALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVL 327
Query: 367 YSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNG 426
Y NS+ +E L ++ G +N + +K + + +D G
Sbjct: 328 YCLSNNSM--AKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRG 385
Query: 427 CGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
P Y +++ + + RY ++M G+++ + VI
Sbjct: 386 VKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVI 432
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 160/368 (43%), Gaps = 26/368 (7%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
SY V ++DILGK +R E+ V + M + F++++R F+ A ++E+A
Sbjct: 41 SYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDA 100
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
IS+F + +F +F TLL + + +E A +F ++++ I N+++
Sbjct: 101 ISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMK 160
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMW----NE 284
C + + A +V++++ C PD +Y + M+ +
Sbjct: 161 VLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQK 220
Query: 285 GCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEP--------NVATYNSLIKH 336
G D+V+ ++DALC V +A+E+ + +G + + S +
Sbjct: 221 GSG--EDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG 278
Query: 337 LCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL-KGPEEVPG--VLERMERNGCS 393
+ +++R+ L E + R C+ +YS + L + + V G VL M G
Sbjct: 279 IERVKRL-----LTETLIRGAIPCLD---SYSAMATDLFEEGKLVEGEEVLLAMRSKGFE 330
Query: 394 LSDDIYNLVLRLYMKWDN-QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMR 452
+ IY ++ + ++ + EM + C P Y ++I G ++GK +A+
Sbjct: 331 PTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVG 390
Query: 453 YFREMTSK 460
Y ++M+ +
Sbjct: 391 YLKKMSKQ 398
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 147/360 (40%), Gaps = 43/360 (11%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAI----SMFY 173
N ++ +L +++R + QVF EM+++ + D++ L++ F K+EEA SMF+
Sbjct: 156 NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 174 TREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG-WCV 232
Q G D+ +R LL LC V+DA + R+ L + ++ I G W
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRK-GLKAPKRCYHHIEAGHWES 274
Query: 233 LGNAHE-AKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
E KR+ + + P L +Y+ M ++G +P
Sbjct: 275 SSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGF--EPT 332
Query: 292 VVICNCIIDALCFKKRVPEALEVF-QDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
I + ALC ++ EA+ V ++M + C P V YN LIK LC + + +
Sbjct: 333 PFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYL 392
Query: 351 EDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWD 410
+ M K+ SC+ N TY L++ L R+G L
Sbjct: 393 KKMS-KQVSCVANEETYQTLVDGLC-------------RDGQFLEAS------------- 425
Query: 411 NQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEK 470
+ +EM P +Y +MI G + + +A+ + EM S+ MV E K
Sbjct: 426 ------QVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWK 479
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 160/368 (43%), Gaps = 26/368 (7%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
SY V ++DILGK +R E+ V + M + F++++R F+ A ++E+A
Sbjct: 41 SYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDA 100
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
IS+F + +F +F TLL + + +E A +F ++++ I N+++
Sbjct: 101 ISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMK 160
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMW----NE 284
C + + A +V++++ C PD +Y + M+ +
Sbjct: 161 VLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQK 220
Query: 285 GCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEP--------NVATYNSLIKH 336
G D+V+ ++DALC V +A+E+ + +G + + S +
Sbjct: 221 GSG--EDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG 278
Query: 337 LCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL-KGPEEVPG--VLERMERNGCS 393
+ +++R+ L E + R C+ +YS + L + + V G VL M G
Sbjct: 279 IERVKRL-----LTETLIRGAIPCLD---SYSAMATDLFEEGKLVEGEEVLLAMRSKGFE 330
Query: 394 LSDDIYNLVLRLYMKWDN-QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMR 452
+ IY ++ + ++ + EM + C P Y ++I G ++GK +A+
Sbjct: 331 PTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVG 390
Query: 453 YFREMTSK 460
Y ++M+ +
Sbjct: 391 YLKKMSKQ 398
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 147/360 (40%), Gaps = 43/360 (11%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAI----SMFY 173
N ++ +L +++R + QVF EM+++ + D++ L++ F K+EEA SMF+
Sbjct: 156 NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 174 TREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG-WCV 232
Q G D+ +R LL LC V+DA + R+ L + ++ I G W
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRK-GLKAPKRCYHHIEAGHWES 274
Query: 233 LGNAHE-AKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
E KR+ + + P L +Y+ M ++G +P
Sbjct: 275 SSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGF--EPT 332
Query: 292 VVICNCIIDALCFKKRVPEALEVF-QDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
I + ALC ++ EA+ V ++M + C P V YN LIK LC + + +
Sbjct: 333 PFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYL 392
Query: 351 EDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWD 410
+ M K+ SC+ N TY L++ L R+G L
Sbjct: 393 KKMS-KQVSCVANEETYQTLVDGLC-------------RDGQFLEAS------------- 425
Query: 411 NQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEK 470
+ +EM P +Y +MI G + + +A+ + EM S+ MV E K
Sbjct: 426 ------QVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWK 479
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 5/251 (1%)
Query: 105 SKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMS-HREGLVNEDTFSTLLRRFA-AA 162
SK Y PT + +++ G+ ++E+ +V + + +E+ F L+R + A
Sbjct: 86 SKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLA 145
Query: 163 HKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKT 222
++ AI + + FG +F +L L K ++ +F S A + + D
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVS-APKLGVEIDACC 204
Query: 223 WNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMW 282
N+++ G C GN A ++ + K RP++ T++ I M
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 283 NEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRR 342
E +PD + N +I L K RV E +++ + MK +GCEPN TY ++ L +R
Sbjct: 265 KE--RIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKR 322
Query: 343 MEKVYELVEDM 353
+ E++ M
Sbjct: 323 NLEAKEMMSQM 333
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 11/183 (6%)
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
D N +I LC + AL++ + ++ PNV T++ LI+ C + E+ ++L+
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 351 EDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLERMERNGCSLSDDIYNLVLRLYM 407
E ME+++ P+ +T++ L++ L+ EE +LERM+ GC + Y V LY
Sbjct: 261 ERMEKER--IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEV--LYG 316
Query: 408 KWDNQDGL--RKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
D + L ++ +M G P SY M+ G E + + R+M + G V
Sbjct: 317 LLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFV-- 374
Query: 466 PRT 468
P+T
Sbjct: 375 PKT 377
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 157/404 (38%), Gaps = 53/404 (13%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + N ++D K+ F + DE+S +N T + LL + H +EEA
Sbjct: 194 PDTVSYNTLIDGFCKVGNFVRAKALVDEISE----LNLITHTILLSSYYNLHAIEEA--- 246
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ G D D+ F +++ LC+ V + L + E ++ + T+ +++
Sbjct: 247 YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLR-EMEEMSVYPNHVTYTTLVDSLF 305
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
A ++ ++ DL Y + F+ + + N P+
Sbjct: 306 KANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLED--NQVPN 363
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
VV ++D LC + A + M E+ PNV TY+S+I K +E+ L+
Sbjct: 364 VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLR 423
Query: 352 DMERKKGSCMPNAVTYSCLLNSL--KGPE------------------------------- 378
ME + + +PN TY +++ L G E
Sbjct: 424 KMEDQ--NVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKR 481
Query: 379 -----EVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRS 433
EV G+++ M G +L Y ++ ++ K +++ +EM+ G D S
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVS 541
Query: 434 YTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISMNS 477
Y ++I G + GK+ Y + M KG+ EP I MNS
Sbjct: 542 YNVLISGMLKFGKVGADWAY-KGMREKGI--EPDIATFNIMMNS 582
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/400 (20%), Positives = 152/400 (38%), Gaps = 50/400 (12%)
Query: 116 VCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTR 175
+ + +++ L ++ R +E+ + +M + +++ +++L+ F E A++
Sbjct: 471 ILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEM 530
Query: 176 EQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG------ 229
++ G+ D+ ++ L+ + ++ V + RE + DI T+N+++N
Sbjct: 531 QERGMPWDVVSYNVLISGMLKFGKV--GADWAYKGMREKGIEPDIATFNIMMNSQRKQGD 588
Query: 230 -------W----------------------CVLGNAHEAKRVWKDIMASKCRPDLFTYAT 260
W C G EA + +M + P+L TY
Sbjct: 589 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648
Query: 261 FIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKE 320
F+ + + G V N +I LC +A V DM+
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY--NTLIATLCKLGMTKKAAMVMGDMEA 706
Query: 321 RGCEPNVATYNSLIKHL---CKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP 377
RG P+ T+NSL+ +R+ Y ++ + PN TY+ ++ L
Sbjct: 707 RGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME-----AGISPNVATYNTIIRGLSDA 761
Query: 378 ---EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSY 434
+EV L M+ G D YN ++ K N G + EM +G P +Y
Sbjct: 762 GLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTY 821
Query: 435 TIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
++I GKM A +EM +G+ T +IS
Sbjct: 822 NVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMIS 861
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 13/267 (4%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P+ CN ++ +L + + EE + ++M E N T+ L ++ HK +AI
Sbjct: 606 PSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT-SSKHKRADAI-- 662
Query: 172 FYTRE---QFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVIL 227
F T E +G+ L + TL+ LC+ + A + +AR F D T+N ++
Sbjct: 663 FKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI--PDTVTFNSLM 720
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCN 287
+G+ V + +A + +M + P++ TY T I M + G
Sbjct: 721 HGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG-- 778
Query: 288 CKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVY 347
+PD N +I + ++ ++ +M G P +TYN LI + +M +
Sbjct: 779 MRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAR 838
Query: 348 ELVEDMERKKGSCMPNAVTYSCLLNSL 374
EL+++M ++ S PN TY +++ L
Sbjct: 839 ELLKEMGKRGVS--PNTSTYCTMISGL 863
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/405 (18%), Positives = 148/405 (36%), Gaps = 46/405 (11%)
Query: 108 DSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEE 167
D+ P ++D L K + +M + + N T+S+++ + +EE
Sbjct: 358 DNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEE 417
Query: 168 AISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVIL 227
A+S+ E + + + T++ L + E A L + R + + + ++
Sbjct: 418 AVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL-SKEMRLIGVEENNYILDALV 476
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCN 287
N +G E K + KD+++ D Y + I M G
Sbjct: 477 NHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM- 535
Query: 288 CKP-DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSL------------- 333
P DVV N +I + +V A ++ M+E+G EP++AT+N +
Sbjct: 536 --PWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGI 592
Query: 334 ----------------------IKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLL 371
+ LC+ +ME+ ++ M + PN TY L
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME--IHPNLTTYRIFL 650
Query: 372 NSLKGPEEVPGVL---ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCG 428
++ + + E + G LS +YN ++ K +ME G
Sbjct: 651 DTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI 710
Query: 429 PDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
PD ++ ++HG++ ++ A+ + M G+ T +I
Sbjct: 711 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTII 755
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 126/328 (38%), Gaps = 45/328 (13%)
Query: 166 EEAISMFYTREQFGLDLD-------LDAFRTLL-MWLCRYKHVEDAETLFHSKAREFQLH 217
E S+ T+ +F DL + F TL ++L + A TL S F +
Sbjct: 33 SEETSLSITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTL--SAMCTFGVV 90
Query: 218 RDIKTWNVILNGWCVLGNAH-EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXX 276
D + WN +++ + V G H + ++ ++A PD+F I
Sbjct: 91 PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAIS 150
Query: 277 XFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKH 336
R D V N +I LC EA + +M + G P+ +YN+LI
Sbjct: 151 LLRNRV-----ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDG 205
Query: 337 LCKIRRMEKVYELVEDM----------------------ERKKGSCM----PNAVTYSCL 370
CK+ + LV+++ E + M P+ VT+S +
Sbjct: 206 FCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSI 265
Query: 371 LNSL-KGPEEVPG--VLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGC 427
+N L KG + + G +L ME + Y ++ K + + +M G
Sbjct: 266 INRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGI 325
Query: 428 GPDRRSYTIMIHGHYENGKMKDAMRYFR 455
D YT+++ G ++ G +++A + F+
Sbjct: 326 PVDLVVYTVLMDGLFKAGDLREAEKTFK 353
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 159/426 (37%), Gaps = 61/426 (14%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
Y P S + ++ L RF+E H+ F + +E T + ++ R +
Sbjct: 85 GYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVST 144
Query: 169 ISMFYTREQFGLDL--DLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
+ + + F + L + L+ LC V DA L L D+ T+ +
Sbjct: 145 LGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLP-DVVTFTTL 203
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMW---- 282
+ G+C + A +V+ ++ RP+ T + I + +W
Sbjct: 204 IGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMK 263
Query: 283 -------------------------NEGCNCKPDVVICNCI---------IDALCFKKRV 308
N+ ++ +C + ID+LC +R
Sbjct: 264 NETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRN 323
Query: 309 PEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYS 368
A + MK +G +P +YN++I LCK + Y+L+E E + P+ TY
Sbjct: 324 HGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLE--EGSEFEFFPSEYTYK 381
Query: 369 CLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERN 425
L+ SL + VLE M R + IYN+ LR DN + M +
Sbjct: 382 LLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQG 441
Query: 426 GCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK---------------GMVAEPRTEK 470
C PD + +I+G + G++ DAM+ +M + G++A+ R E+
Sbjct: 442 DCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEE 501
Query: 471 LVISMN 476
+ +N
Sbjct: 502 ALDVLN 507
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 141/376 (37%), Gaps = 48/376 (12%)
Query: 126 KMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMF-----YTREQFGL 180
++ E H+VFDEM N T S L+ F VE + Y + +
Sbjct: 209 EIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDT 268
Query: 181 DLDLDAFRTLLMWLCR-------------------------YKHVEDAETLF---HSKAR 212
+ AF L+ +CR Y H+ D+ + H AR
Sbjct: 269 SMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAAR 328
Query: 213 EFQLHRDI------KTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXX 266
+ + ++N I++G C G A ++ ++ + P +TY +
Sbjct: 329 IVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLC 388
Query: 267 XXXXXXXXXXXFRGMW-NEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEP 325
M EG + I N + LC E L V M + C P
Sbjct: 389 KELDTGKARNVLELMLRKEGAD---RTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRP 445
Query: 326 NVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKG---PEEVPG 382
+ T N++I LCK+ R++ ++++DM K C P+AVT + ++ L EE
Sbjct: 446 DEYTLNTVINGLCKMGRVDDAMKVLDDMMTGK-FCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 383 VLER-MERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGH 441
VL R M N YN V+R K D + ++E+ D +Y I+I G
Sbjct: 505 VLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGL 564
Query: 442 YENGKMKDAMRYFREM 457
K+ A +++ ++
Sbjct: 565 CVTNKVDMAKKFWDDV 580
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 109/261 (41%), Gaps = 42/261 (16%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEM-SHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
P N +++ L KM R ++ +V D+M + + + T +T++ A + EEA+
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 171 MF-YTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
+ + + + A+ ++ L + ++A ++F + + + D T+ +I++G
Sbjct: 505 VLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVF-GQLEKASVTADSTTYAIIIDG 563
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCK 289
CV AK+ W D++ R D F YA F+
Sbjct: 564 LCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLK-------------------------- 597
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
LC + +A D+ + G PNV YN++I + + Y++
Sbjct: 598 -----------GLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQI 646
Query: 350 VEDMERKKGSCMPNAVTYSCL 370
+E+M RK G P+AVT+ L
Sbjct: 647 LEEM-RKNGQA-PDAVTWRIL 665
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 113/295 (38%), Gaps = 43/295 (14%)
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
++ L+ LC+ A + R+ R + +N+ L G CV+ N E V
Sbjct: 379 TYKLLMESLCKELDTGKARNVLELMLRKEGADR-TRIYNIYLRGLCVMDNPTEILNVLVS 437
Query: 246 IMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFK 305
++ CRPD +T T I M G C PD V N ++ L +
Sbjct: 438 MLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMT-GKFCAPDAVTLNTVMCGLLAQ 496
Query: 306 KRVPEALEVFQD-MKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNA 364
R EAL+V M E +P V YN++I+ L K+ + ++ + +E K S ++
Sbjct: 497 GRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLE--KASVTADS 554
Query: 365 VTYSCLLNSLKGPEEV----------------------PGVLERMERNG-----CSLSDD 397
TY+ +++ L +V L+ + ++G C D
Sbjct: 555 TTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYD 614
Query: 398 I-----------YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGH 441
+ YN V+ + + + +EM +NG PD ++ I+ H
Sbjct: 615 LADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKLH 669
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 145/333 (43%), Gaps = 11/333 (3%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + CN L L + ++ VF+ M +E V T+S +L+ A E A+ M
Sbjct: 140 PNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKEN-VTGHTYSLMLKAVAEVKGCESALRM 198
Query: 172 FYTREQFGLD---LDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
F E+ D+ + T + R +V + E ++ + + +I T++++++
Sbjct: 199 FRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEI-TYSLLVS 257
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
+ G + A V+ +++ +K I F+ M +G
Sbjct: 258 IFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGM-- 315
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
KP++V CN +I++L +V +V+ +K G +P+ T+N+L+ L K R E V +
Sbjct: 316 KPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQ 375
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNS---LKGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
L DM R + C N Y+ + S L E+ +L ME +G ++S YNLV+
Sbjct: 376 LF-DMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISA 434
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMI 438
K ++ M + C P+ +Y ++
Sbjct: 435 CEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLV 467
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 143/356 (40%), Gaps = 50/356 (14%)
Query: 148 NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF 207
NE+T S LR+ + KV A+ +F + GL + A + L L R ++ A T+F
Sbjct: 106 NEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVF 165
Query: 208 H---------------------------SKAREF-QLHR--------DIKTWNVILNGWC 231
S R F +L R D+ +N ++
Sbjct: 166 EFMRKKENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCG 225
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
+ N +E +R+W+ + TY+ + + M N + + D
Sbjct: 226 RINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLRED 285
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRME---KVYE 348
+ +I A +++ AL++FQ M ++G +PN+ N+LI L K ++ KVY
Sbjct: 286 AMYA--MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYS 343
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERME----RNGCSLSDDIYNLVLR 404
+++ + K P+ T++ LL +L VL+ + N C L++ +YN +
Sbjct: 344 VLKSLGHK-----PDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMV 398
Query: 405 LYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
K + K EME +G SY ++I ++ K K A+ + M +
Sbjct: 399 SCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQR 454
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 108/251 (43%), Gaps = 18/251 (7%)
Query: 94 WKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
W AL F K P CN +++ LGK + + +V+ + +E T++
Sbjct: 300 WDLALKIFQSMLK-KGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWN 358
Query: 154 TLLRRFAAAHKVEEAISMF-YTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAR 212
LL A++ E+ + +F R + L+ + T ++ + + E A L + +
Sbjct: 359 ALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLY-EME 417
Query: 213 EFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXX 272
L ++N++++ + A V++ + C+P+ FTY + +
Sbjct: 418 GSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCI------ 471
Query: 273 XXXXXFRGMWNEGCN----CKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVA 328
+ +W+E + +PDV + N I +C ++ A E++ M+E G EP+
Sbjct: 472 -----WGSLWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGK 526
Query: 329 TYNSLIKHLCK 339
T ++++L K
Sbjct: 527 TRAMMLQNLKK 537
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 218 RDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXX 277
R +++ ++N G HEA+ V+K + + RP L +Y T +
Sbjct: 43 RTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSI 102
Query: 278 FRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHL 337
+ G K D + N +I+A + +A++ MKE G P +TYN+LIK
Sbjct: 103 VSEVEQSG--TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY 160
Query: 338 CKIRRMEKVYELVEDM-ERKKGSCMPNAVTYSCLLNS---LKGPEEVPGVLERMERNGCS 393
+ E+ EL++ M E PN T++ L+ + K EE V+++ME G
Sbjct: 161 GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 394 LSDDIYNLVLRLYMKWDNQDGLRKTWDEME----RNGCGPDRRSYTIMIHGHYENGKMKD 449
YN + Y++ + +R + +E + P+ R+ I++ G+ G+++D
Sbjct: 221 PDTVTYNTIATCYVQ--KGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRD 278
Query: 450 AMRYFREMTSKGMVAEPRTEKLVISMNS 477
+R+ R M E R E ++ NS
Sbjct: 279 GLRFVRRM------KEMRVEANLVVFNS 300
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/377 (19%), Positives = 144/377 (38%), Gaps = 29/377 (7%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
+L + ++ + + E+ ++ F+ ++ F+ + +E+A+ ++ G
Sbjct: 86 LLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELG 145
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE--FQLHRDIKTWNVILNGWCVLGNAH 237
L+ + TL+ E + L E + +I+T+NV++ WC
Sbjct: 146 LNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVE 205
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
EA V K + RPD TY T KP+ C
Sbjct: 206 EAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGI 265
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV------- 350
++ C + RV + L + MKE E N+ +NSLI ++ + + E+
Sbjct: 266 VVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMS 325
Query: 351 --EDME--------------RKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLERMERNG 391
E++E K+ + + +TYS ++N+ E+ V + M + G
Sbjct: 326 FNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAG 385
Query: 392 CSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAM 451
Y+++ + Y++ + + + P+ +T +I G NG M DAM
Sbjct: 386 VKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAM 444
Query: 452 RYFREMTSKGMVAEPRT 468
R F +M G+ +T
Sbjct: 445 RVFNKMCKFGVSPNIKT 461
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 150/397 (37%), Gaps = 101/397 (25%)
Query: 113 TSRVCNEILDILGKMSRFEELHQVFD---EMSHREGLVNEDTFSTLLRRFAAAHKVEEAI 169
T R +++++L + R E VF E HR L+ +++TLL +
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLI---SYTTLLAAMTVQKQYGSIS 100
Query: 170 SMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
S+ EQ G LD F ++ ++EDA K +E L+ T+N ++ G
Sbjct: 101 SIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALL-KMKELGLNPTTSTYNTLIKG 159
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCK 289
+ + G + + D+M + D+
Sbjct: 160 YGIAGKPERSSELL-DLMLEEGNVDV---------------------------------G 185
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKV--- 346
P++ N ++ A C KK+V EA EV + M+E G P+ TYN++ C +++ E V
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI--ATCYVQKGETVRAE 243
Query: 347 YELVEDMERKK--------------GSCM--------------------PNAVTYSCLLN 372
E+VE M K+ G C N V ++ L+N
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 373 SLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWD-------NQDGLRKTWDEMERN 425
G +E M+R+G D L L L M ++ NQ + M+
Sbjct: 304 ---------GFVEVMDRDGI----DEVTLTL-LLMSFNEEVELVGNQKMKVQVLTLMKEC 349
Query: 426 GCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
D +Y+ +++ G M+ A + F+EM G+
Sbjct: 350 NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGV 386
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 78/180 (43%), Gaps = 11/180 (6%)
Query: 182 LDLDAFRTLLMWLCRYKHVEDAETLFHSKAR--------EFQLHRDIKTWNVILNGWCVL 233
+D D + + L E+ E + + K + E + D+ T++ ++N W
Sbjct: 309 MDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSA 368
Query: 234 GNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVV 293
G +A +V+K+++ + +PD Y+ + E +P+VV
Sbjct: 369 GYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES---RPNVV 425
Query: 294 ICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDM 353
I +I C + +A+ VF M + G PN+ T+ +L+ ++++ K E+++ M
Sbjct: 426 IFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM 485
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 157/382 (41%), Gaps = 12/382 (3%)
Query: 94 WKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV-NEDTF 152
W+ AL FN K Y P + ++ +LG + ++ +F+ M EGL D +
Sbjct: 124 WQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVM-LSEGLKPTIDVY 182
Query: 153 STLLRRFAAAHKVEEAISMF-YTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKA 211
++L+ + + +++A S Y + D+ F L+ C+ + +++ +
Sbjct: 183 TSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMS 242
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA-SKCRPDLFTYATFIXXXXXXXX 270
+ T+N I++G+ G E + V D++ PD+ T + I
Sbjct: 243 Y-LGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRN 301
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
+ G +PD+ N +I + + V M++R TY
Sbjct: 302 MRKMESWYSRFQLMGV--QPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTY 359
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE---EVPGVLERM 387
N +I+ K R+EK+ ++ M K PN++TY L+N+ ++ VL ++
Sbjct: 360 NIVIETFGKAGRIEKMDDVFRKM--KYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQI 417
Query: 388 ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKM 447
+ L +N ++ Y + + +++ + +ME C PD+ ++ MI + +G
Sbjct: 418 VNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIF 477
Query: 448 KDAMRYFREMTSKGMVAEPRTE 469
++M S + + TE
Sbjct: 478 DAVQELEKQMISSDIGKKRLTE 499
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 124/319 (38%), Gaps = 36/319 (11%)
Query: 95 KPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFST 154
K A FF W +++ T+ + ++ I + ++ + ++ DEM TF+
Sbjct: 133 KLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNL 192
Query: 155 LLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREF 214
L+ A + + F + F ++ +L L K + + ++ + E
Sbjct: 193 LICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYE-QMLED 251
Query: 215 QLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXX 274
D+ T+N+++ LG R+ +++ PDL+TY +
Sbjct: 252 GFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAA 311
Query: 275 XXXFRGMWNEG---------------------------------CNCKPDVVICNCIIDA 301
M G C PDVV +I
Sbjct: 312 LNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITG 371
Query: 302 LCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCM 361
+ +A E+F++M E+G PNV TYNS+I+ C + ++ L+++ME + C
Sbjct: 372 YISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESR--GCN 429
Query: 362 PNAVTYSCLLNSLKGPEEV 380
PN V YS L+N+LK +V
Sbjct: 430 PNFVVYSTLVNNLKNAGKV 448
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 105/249 (42%), Gaps = 38/249 (15%)
Query: 108 DSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEE 167
D + P N ++ ++ + + L+++ DEM + T++ LL A +K
Sbjct: 251 DGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLA 310
Query: 168 AISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVIL 227
A+++ + G++ + F TL+ L R +E A F + + D+ + V++
Sbjct: 311 ALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLE-ACKYFMDETVKVGCTPDVVCYTVMI 369
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCN 287
G+ G +A+ ++K++ P++FTY
Sbjct: 370 TGYISGGELEKAEEMFKEMTEKGQLPNVFTY----------------------------- 400
Query: 288 CKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVY 347
N +I C + EA + ++M+ RGC PN Y++L+ +L ++ + +
Sbjct: 401 --------NSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAH 452
Query: 348 ELVEDMERK 356
E+V+DM K
Sbjct: 453 EVVKDMVEK 461
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 296 NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
N I+ +L K+ V++ M E G P+V TYN ++ ++ + +++Y L+++M +
Sbjct: 226 NAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVK 285
Query: 356 KKGSCMPNAVTYSCLLNSLKG---PEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQ 412
S P+ TY+ LL+ L P +L M G + ++ +
Sbjct: 286 DGFS--PDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL 343
Query: 413 DGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
+ + DE + GC PD YT+MI G+ G+++ A F+EMT KG +
Sbjct: 344 EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL 394
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/363 (17%), Positives = 156/363 (42%), Gaps = 12/363 (3%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
++ GK+ F +V +S N +++ L+ + K A ++F + G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ--LHRDIKTWNVILNGWCVLGNAH 237
+ ++ +L ++AE +F + E + L D K +++++ + GN
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
+A++V+ ++ TY + + + + +PDVV
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQM-----QRSDIQPDVVSYAL 319
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
+I A +R EAL VF++M + G P YN L+ +E+ + + M R +
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 379
Query: 358 GSCMPNAVTYSCLLNSLKGPEEVPGV---LERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
P+ +Y+ +L++ ++ G +R++ +G + Y +++ Y K ++ +
Sbjct: 380 --IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEK 437
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+ + +++M +G ++ T ++ A+ +++EM S G+ + + + +++S
Sbjct: 438 MMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLS 497
Query: 475 MNS 477
+ S
Sbjct: 498 LAS 500
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 9/237 (3%)
Query: 225 VILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNE 284
+++ + LGN + A+RV + P++ +Y + FR M +
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 285 GCNCKPDVVICNCIIDALCFKKRVPEALEVFQ---DMKERGCEPNVATYNSLIKHLCKIR 341
G +P + I+ + EA EVF+ D K+ +P+ Y+ +I K
Sbjct: 204 GP--EPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
Query: 342 RMEKVYELVEDMERKKGSCMPNA-VTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYN 400
EK ++ M G +P + VTY+ L++ +EV + ++M+R+ Y
Sbjct: 262 NYEKARKVFSSM---VGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYA 318
Query: 401 LVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
L+++ Y + ++ ++EM G P ++Y I++ +G ++ A F+ M
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 105/242 (43%), Gaps = 41/242 (16%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P ++ + ++ + K +E+ +VF M + + T+++L+ F ++K E +
Sbjct: 245 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS-FETSYK--EVSKI 301
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ ++ + D+ ++ L+ R + E+A ++F + + + K +N++L+ +
Sbjct: 302 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFE-EMLDAGVRPTHKAYNILLDAFA 360
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
+ G +AK V+K + + PDL++Y T
Sbjct: 361 ISGMVEQAKTVFKSMRRDRIFPDLWSYTT------------------------------- 389
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
++ A + A + F+ +K G EPN+ TY +LIK K +EK+ E+ E
Sbjct: 390 ------MLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE 443
Query: 352 DM 353
M
Sbjct: 444 KM 445
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/363 (17%), Positives = 156/363 (42%), Gaps = 12/363 (3%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
++ GK+ F +V +S N +++ L+ + K A ++F + G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ--LHRDIKTWNVILNGWCVLGNAH 237
+ ++ +L ++AE +F + E + L D K +++++ + GN
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
+A++V+ ++ TY + + + + +PDVV
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQM-----QRSDIQPDVVSYAL 326
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
+I A +R EAL VF++M + G P YN L+ +E+ + + M R +
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 386
Query: 358 GSCMPNAVTYSCLLNSLKGPEEVPGV---LERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
P+ +Y+ +L++ ++ G +R++ +G + Y +++ Y K ++ +
Sbjct: 387 --IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEK 444
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+ + +++M +G ++ T ++ A+ +++EM S G+ + + + +++S
Sbjct: 445 MMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLS 504
Query: 475 MNS 477
+ S
Sbjct: 505 LAS 507
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 9/237 (3%)
Query: 225 VILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNE 284
+++ + LGN + A+RV + P++ +Y + FR M +
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 285 GCNCKPDVVICNCIIDALCFKKRVPEALEVFQ---DMKERGCEPNVATYNSLIKHLCKIR 341
G +P + I+ + EA EVF+ D K+ +P+ Y+ +I K
Sbjct: 211 GP--EPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268
Query: 342 RMEKVYELVEDMERKKGSCMPNA-VTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYN 400
EK ++ M G +P + VTY+ L++ +EV + ++M+R+ Y
Sbjct: 269 NYEKARKVFSSM---VGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYA 325
Query: 401 LVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
L+++ Y + ++ ++EM G P ++Y I++ +G ++ A F+ M
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 105/242 (43%), Gaps = 41/242 (16%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P ++ + ++ + K +E+ +VF M + + T+++L+ F ++K E +
Sbjct: 252 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS-FETSYK--EVSKI 308
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ ++ + D+ ++ L+ R + E+A ++F + + + K +N++L+ +
Sbjct: 309 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFE-EMLDAGVRPTHKAYNILLDAFA 367
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
+ G +AK V+K + + PDL++Y T
Sbjct: 368 ISGMVEQAKTVFKSMRRDRIFPDLWSYTT------------------------------- 396
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
++ A + A + F+ +K G EPN+ TY +LIK K +EK+ E+ E
Sbjct: 397 ------MLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE 450
Query: 352 DM 353
M
Sbjct: 451 KM 452
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 153/345 (44%), Gaps = 27/345 (7%)
Query: 124 LGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLD 183
L K R E +V +EM + + + +S L+R FA A +V +F +E G L
Sbjct: 258 LAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLF--KEAGGKKLL 315
Query: 184 LD---AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAK 240
D + +LM++ E + + E ++ I I+NG+ EA
Sbjct: 316 KDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCI--LCAIVNGFSKQRGFAEAV 373
Query: 241 RVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCN-CKPDVVICNCII 299
+V++ M +C TYA I F M +G + C VV + I+
Sbjct: 374 KVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKC---VVAYSNIM 430
Query: 300 DALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIK---HLCKIRRMEKVYELVEDMERK 356
D +R+ +A+ + MK+RGC+PN+ YNSLI +RR EK+++ E K
Sbjct: 431 DMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWK-----EMK 485
Query: 357 KGSCMPNAVTYSCLLNSLKGPEEVPGVLE-----RMERNGCSLSDDIYNLVLRLYMKWDN 411
+ +P+ V+Y+ ++++ +E+ +E RM R + + +++ ++ K
Sbjct: 486 RAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRG--KIDRAMAGIMVGVFSKTSR 543
Query: 412 QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFRE 456
D L + +M+ G D R Y+ ++ + G + +R+ +E
Sbjct: 544 IDELMRLLQDMKVEGTRLDARLYSSALNALRDAG-LNSQIRWLQE 587
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/437 (21%), Positives = 160/437 (36%), Gaps = 83/437 (18%)
Query: 92 SDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDT 151
+D A FF+WA K Y N L + F Q+ + M + +E
Sbjct: 136 NDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQ 195
Query: 152 FSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKA 211
F L+R A + ++ ++FG + + ++ L + + + A ++
Sbjct: 196 FEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYED-F 254
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
+E L + T+ +++ G C G E + + + + C+PD+F Y I
Sbjct: 255 KEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNL 314
Query: 272 XXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMK------------ 319
+ M + KPDV+ ++ LC RV E+F +MK
Sbjct: 315 DASLRVWDEMRRD--EIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYR 372
Query: 320 -----------------------ERGCEPNVATYNSLIKHLCKIRRMEKVYELV-----E 351
+ G ++ YN++IK LC + +++K Y+L E
Sbjct: 373 VLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEE 432
Query: 352 DMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSD--------------- 396
++E + P V Y ++N L + VLER+ G +SD
Sbjct: 433 ELEPDFETLSPIMVAY-VVMNRL---SDFSNVLERIGELGYPVSDYLTQFFKLLCADEEK 488
Query: 397 -------------------DIYNLVLR-LYMKWDNQDGLRKTWDEMERNGCGPDRRSYTI 436
+YN+++ LY D Q L + EM + G PD SY+I
Sbjct: 489 NAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFY-EMRKLGFEPDSSSYSI 547
Query: 437 MIHGHYENGKMKDAMRY 453
I E G +K A +
Sbjct: 548 AICCFVEKGDVKAACSF 564
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 108/273 (39%), Gaps = 40/273 (14%)
Query: 203 AETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH-EAKRVWKDIMASKCRP-DLFTYAT 260
A FH ++ D +N +C+ N H A ++M S+ RP +
Sbjct: 141 AAKFFHWAGKQKGYKHDFAAYNAF--AYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEI 198
Query: 261 FIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKE 320
I + M G KP V + N I+DAL AL V++D KE
Sbjct: 199 LIRMHADNRRGLRVYYVYEKMKKFGF--KPRVFLYNRIMDALVKNGYFDLALAVYEDFKE 256
Query: 321 RGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEV 380
G T+ L+K LCK R+E++ E+++ M ++ C P+ Y+ ++ +L
Sbjct: 257 DGLVEESTTFMILVKGLCKAGRIEEMLEILQRM--RENLCKPDVFAYTAMIKTL------ 308
Query: 381 PGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHG 440
+ N D + WDEM R+ PD +Y ++ G
Sbjct: 309 --------------------------VSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVG 342
Query: 441 HYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
++G+++ F EM K ++ + +++I
Sbjct: 343 LCKDGRVERGYELFMEMKGKQILIDREIYRVLI 375
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 7/199 (3%)
Query: 187 FRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
++ ++ LC K +A +F + K + + R + T ++ G+C G A+++W +
Sbjct: 286 YQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYT--TMIRGFCEKGWLGSARKLWFE 343
Query: 246 IMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFK 305
++ RP+ F Y I + M G ++ CN +I C
Sbjct: 344 MIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYG--GTMLSCNTMIKGFCSH 401
Query: 306 KRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAV 365
+ EA E+F++M E G PN TYN+LIK CK ++EK +L +++ K P+ +
Sbjct: 402 GKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL--KALGLKPSGM 459
Query: 366 TYSCLLNSLKGPEEVPGVL 384
Y+ L+ +LK + V L
Sbjct: 460 AYAALVRNLKMSDSVATSL 478
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 297 CIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
C+I ALC V E E+ + ++G +P Y LI C+I + E++ M
Sbjct: 218 CLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTM--I 275
Query: 357 KGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQD 413
+ P+ Y ++ L K E + + ++ G + +Y ++R + +
Sbjct: 276 AWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLG 335
Query: 414 GLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
RK W EM + G P+ +Y +MIHGH++ G++ ++ EM G
Sbjct: 336 SARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNG 383
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/291 (19%), Positives = 113/291 (38%), Gaps = 43/291 (14%)
Query: 175 REQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLG 234
+E + D + R L+ LC V + L ++ L + +++G+C +G
Sbjct: 204 KEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQ-GLDPGQYVYAKLISGFCEIG 262
Query: 235 NAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVI 294
N V ++A WN P + I
Sbjct: 263 NYACMSEVLHTMIA---------------------------------WNH----FPSMYI 285
Query: 295 CNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDME 354
II LC K+ EA +F+++K++G P+ Y ++I+ C+ + +L +M
Sbjct: 286 YQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMI 345
Query: 355 RKKGSCMPNAVTYSCLLNSLKGPEEVPGV---LERMERNGCSLSDDIYNLVLRLYMKWDN 411
+K PN Y+ +++ E+ V M RNG + N +++ +
Sbjct: 346 KK--GMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGK 403
Query: 412 QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
D + + M G P+ +Y +I G + K++ ++ ++E+ + G+
Sbjct: 404 SDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGL 454
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 102/236 (43%), Gaps = 4/236 (1%)
Query: 110 YAPTSRVCNEILDILGKMSRFEELHQVFDEM---SHREGLVNEDTFSTLLRRFAAAHKVE 166
+AP SR+ ++ K R + ++ + M R +E T++T++ F A ++
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 167 EAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
A + + G+ + + LL C+ ++ AE L + + D+ ++N+I
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC 286
++G ++ ++ A + ++ P +Y T + F M N+
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDP- 588
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRR 342
K D++ N +++ C + +A V MKE G PNVATY SL + + R+
Sbjct: 589 RVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARK 644
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 38/190 (20%)
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKV 346
N PD V ++ A + A +V +M G N TYN L+K CK ++++
Sbjct: 447 NSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRA 506
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLY 406
+L+ +M G P+ V+Y+ ++ +GC L DD
Sbjct: 507 EDLLREMTEDAG-IEPDVVSYNIII------------------DGCILIDD--------- 538
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEP 466
G ++EM G P + SYT ++ +G+ K A R F EM + +P
Sbjct: 539 -----SAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMN-----DP 588
Query: 467 RTEKLVISMN 476
R + +I+ N
Sbjct: 589 RVKVDLIAWN 598
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 138/318 (43%), Gaps = 7/318 (2%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N + + K E+ ++FDEM R + TF+T++ + A+ F
Sbjct: 179 NVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSS 238
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
FG + D ++ R +V+ A +L+ +AR + D T++ ++ + V GN
Sbjct: 239 FGCEPDNVTMAAMIDAYGRAGNVDMALSLY-DRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
+++++ A +P+L Y I ++ + G P+
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFT--PNWSTYAA 355
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
++ A + +AL ++++MKE+G V YN+L+ R +++ +E+ +DM+ +
Sbjct: 356 LVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCE 415
Query: 358 GSCMPNAVTYSCLLNSLKGP---EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDG 414
+C P++ T+S L+ E L +M G + + V++ Y K D
Sbjct: 416 -TCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDD 474
Query: 415 LRKTWDEMERNGCGPDRR 432
+ +T+D++ G PD R
Sbjct: 475 VVRTFDQVLELGITPDDR 492
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/300 (18%), Positives = 119/300 (39%), Gaps = 43/300 (14%)
Query: 201 EDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYAT 260
E A + ++ + R++ +NV + + + ++++++ +++ +PD T+ T
Sbjct: 156 ETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTT 215
Query: 261 FIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALE------- 313
I F M + G C+PD V +IDA V AL
Sbjct: 216 IISCARQNGVPKRAVEWFEKMSSFG--CEPDNVTMAAMIDAYGRAGNVDMALSLYDRART 273
Query: 314 ----------------------------VFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
++++MK G +PN+ YN LI + + +R +
Sbjct: 274 EKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQ 333
Query: 346 VYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLV 402
+ +D+ PN TY+ L+ + + ++ + M+ G SL+ +YN +
Sbjct: 334 AKIIYKDL--ITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTL 391
Query: 403 LRLYMKWDNQDGLRKTWDEMER-NGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
L + D + + +M+ C PD +++ +I + +G++ +A +M G
Sbjct: 392 LSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAG 451
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 371 LNSLKGPEEVPGVLERM-ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGP 429
LN++ PE P VL + E S +YN+ ++++ K + + K +DEM G P
Sbjct: 149 LNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKP 208
Query: 430 DRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
D ++T +I +NG K A+ +F +M+S G
Sbjct: 209 DNATFTTIISCARQNGVPKRAVEWFEKMSSFG 240
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 170/423 (40%), Gaps = 25/423 (5%)
Query: 69 RALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWA-SKADSYAPTSRVCNEILDILGKM 127
R+LD RR+ D L FF W S Y ++ ++I + +
Sbjct: 46 RSLDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRT 105
Query: 128 SRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAF 187
E+ + M +++ LL + K E A+ + E+ G L+ +
Sbjct: 106 GLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVY 165
Query: 188 RTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNA----------- 236
++L+ L + + A ++ H D T VI+ + A
Sbjct: 166 DSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRA 225
Query: 237 ---HEAKRVWKDIMASK-CRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNE----GCNC 288
E KRV++ + K + D ++Y I F+ M G +
Sbjct: 226 DMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSF 285
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
PD+ N +I LC + +AL V+ ++K G EP+ +TY LI+ CK RM+
Sbjct: 286 GPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMR 345
Query: 349 LVEDMERKKGSCMPNAVTYSCLLN-SLKGPE--EVPGVLERMERNGCSLSDDIYNLVLRL 405
+ +M+ +P+ + Y+CLL+ +LK + E + E+M + G S YN+++
Sbjct: 346 IYGEMQYN--GFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDG 403
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
+ + + ++++ G D +++I+ GK++ A++ EM ++G +
Sbjct: 404 LFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVD 463
Query: 466 PRT 468
T
Sbjct: 464 LVT 466
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 148/382 (38%), Gaps = 30/382 (7%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N ++D L + R E +F ++ + V+ TFS + + K+E A+ + E
Sbjct: 398 NILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMET 457
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G +DL +LL+ + + E L RE L ++ WN + +
Sbjct: 458 RGFSVDLVTISSLLIGFHKQGRWDWKEKLMK-HIREGNLVPNVLRWNAGVEASLKRPQSK 516
Query: 238 E--------AKRVWKDIMA--------------SKCRPDLFTYATFIXXXXXXXXXXXXX 275
+ +K + DIM+ S D ++ + ++
Sbjct: 517 DKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPL 576
Query: 276 XXF-RGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVA-TYNSL 333
RG E DV + N + K + A ++F+ G + TYNS+
Sbjct: 577 FGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSM 636
Query: 334 IKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKG---PEEVPGVLERMERN 390
+ K + +++ M + C + TY+ ++ L + VL+R+ +
Sbjct: 637 MSSFVKKGYFQTARGVLDQMF--ENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQ 694
Query: 391 GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDA 450
G L +YN ++ K D + +D M+ NG PD SY MI + + GK+K+A
Sbjct: 695 GGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEA 754
Query: 451 MRYFREMTSKGMVAEPRTEKLV 472
+Y + M G + T+ ++
Sbjct: 755 YKYLKAMLDAGCLPNHVTDTIL 776
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 108/239 (45%), Gaps = 4/239 (1%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTRE-QF 178
I+++ G++ FE +VFDEM R +F+ LL + K + +F +
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 179 GLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHE 238
++ D+ ++ TL+ LC +A L + L D T+N++L+ G E
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENK-GLKPDHITFNILLHESYTKGKFEE 230
Query: 239 AKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCI 298
+++W ++ + D+ +Y + F + +G KPDV +
Sbjct: 231 GEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKL--KGNELKPDVFTFTAM 288
Query: 299 IDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
I + ++ EA+ ++++++ GC P +NSL+ +CK +E YEL +++ K+
Sbjct: 289 IKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKR 347
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKER-GCEPNVATYNSLIKHLCKIRRMEK 345
NCK + N +++A K+ +F+++ + EP+VA+YN+LIK LC +
Sbjct: 136 NCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTE 195
Query: 346 VYELVEDMERKKGSCMPNAVTYSCLLNS--LKGP-EEVPGVLERMERNGCSLSDDIYNLV 402
L++++E K P+ +T++ LL+ KG EE + RM YN
Sbjct: 196 AVALIDEIENK--GLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNAR 253
Query: 403 LRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
L + + + +D+++ N PD ++T MI G GK+ +A+ +++E+ G
Sbjct: 254 LLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNG 312
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 109/245 (44%), Gaps = 10/245 (4%)
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
I+N + +G A++V+ ++ C+ ++ + F+ + +
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGK- 170
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
+ +PDV N +I LC K EA+ + +++ +G +P+ T+N L+ + E+
Sbjct: 171 LSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEE 230
Query: 346 VYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNL- 401
++ M K + + +Y+ L L EE+ + ++++ G L D++
Sbjct: 231 GEQIWARMVEK--NVKRDIRSYNARLLGLAMENKSEEMVSLFDKLK--GNELKPDVFTFT 286
Query: 402 -VLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
+++ ++ D + E+E+NGC P + + ++ + G ++ A +E+ +K
Sbjct: 287 AMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAK 346
Query: 461 GMVAE 465
++ +
Sbjct: 347 RLLVD 351
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 157/385 (40%), Gaps = 54/385 (14%)
Query: 94 WKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
W L F W K Y P + V ++++ ++GK + +F EM + + ++
Sbjct: 113 WLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYN 172
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
L+ AH +TR++ A + +L + K +E +
Sbjct: 173 ALI----TAH--------LHTRDK------AKALEKVRGYLDKMKGIERCQP-------- 206
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXX 273
++ T+N++L + G + ++KD+ S PD++T+ +
Sbjct: 207 -----NVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKE 261
Query: 274 XXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSL 333
M + CKPD++ N +ID+ K+ + + F+ + +P + T+NS+
Sbjct: 262 MEAVLTRMRSN--ECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSM 319
Query: 334 IKHLCKIRRMEK---VYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERN 390
I + K R ++K V++ + DM + +P+ +TY C++ V E E
Sbjct: 320 IINYGKARMIDKAEWVFKKMNDM-----NYIPSFITYECMIMMYGYCGSVSRAREIFEEV 374
Query: 391 GCS---LSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCG----PDRRSYTIMIHGHYE 443
G S L N +L +Y + +GL D++ N PD +Y ++ Y
Sbjct: 375 GESDRVLKASTLNAMLEVYCR----NGLYIEADKLFHNASAFRVHPDASTYKF-LYKAYT 429
Query: 444 NGKMKDAMRYF-REMTSKGMVAEPR 467
MK+ ++ ++M G+V R
Sbjct: 430 KADMKEQVQILMKKMEKDGIVPNKR 454
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 5/171 (2%)
Query: 296 NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
N I+++L K+ V++ M E G P+V TYN L+ ++ +M++ L ++M R
Sbjct: 223 NAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMAR 282
Query: 356 KKGSCMPNAVTYSCLLNSL-KG--PEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQ 412
S P++ TY+ LL+ L KG P L M+ G S Y ++ + N
Sbjct: 283 DGFS--PDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNL 340
Query: 413 DGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
+ + DEM + GC PD YT+MI G+ +G++ A FREMT KG +
Sbjct: 341 EACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQL 391
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 129/336 (38%), Gaps = 45/336 (13%)
Query: 95 KPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFST 154
K A FF W+ + + + T + ++ I + ++ + ++ DEM TF+
Sbjct: 130 KLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNL 189
Query: 155 LLRRFAAAHKVEEAISMFYTREQFG---LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKA 211
L+ A ++A+ F + F +A L+ + +YK +E + +
Sbjct: 190 LICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIE----WVYKQM 245
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
E D+ T+N++L LG R++ ++ PD +TY +
Sbjct: 246 LEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKP 305
Query: 272 XXXXXXFRGMWNEGCN---------------------------------CKPDVVICNCI 298
M G + C+PDVV +
Sbjct: 306 LAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVM 365
Query: 299 IDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKG 358
I + +A E+F++M +G PNV TYNS+I+ LC + L+++ME +
Sbjct: 366 ITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESR-- 423
Query: 359 SCMPNAVTYSCLLNSLKGP---EEVPGVLERMERNG 391
C PN V YS L++ L+ E V+ M + G
Sbjct: 424 GCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 157/385 (40%), Gaps = 54/385 (14%)
Query: 94 WKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
W L F W K Y P + V ++++ ++GK + +F EM + + ++
Sbjct: 113 WLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYN 172
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
L+ AH +TR++ A + +L + K +E +
Sbjct: 173 ALI----TAH--------LHTRDK------AKALEKVRGYLDKMKGIERCQP-------- 206
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXX 273
++ T+N++L + G + ++KD+ S PD++T+ +
Sbjct: 207 -----NVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKE 261
Query: 274 XXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSL 333
M + CKPD++ N +ID+ K+ + + F+ + +P + T+NS+
Sbjct: 262 MEAVLTRMRSN--ECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSM 319
Query: 334 IKHLCKIRRMEK---VYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERN 390
I + K R ++K V++ + DM + +P+ +TY C++ V E E
Sbjct: 320 IINYGKARMIDKAEWVFKKMNDM-----NYIPSFITYECMIMMYGYCGSVSRAREIFEEV 374
Query: 391 GCS---LSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCG----PDRRSYTIMIHGHYE 443
G S L N +L +Y + +GL D++ N PD +Y ++ Y
Sbjct: 375 GESDRVLKASTLNAMLEVYCR----NGLYIEADKLFHNASAFRVHPDASTYKF-LYKAYT 429
Query: 444 NGKMKDAMRYF-REMTSKGMVAEPR 467
MK+ ++ ++M G+V R
Sbjct: 430 KADMKEQVQILMKKMEKDGIVPNKR 454
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 147/365 (40%), Gaps = 49/365 (13%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N +L+ L K E+ + EM N +++TL++ + + V++A+ +F T +
Sbjct: 160 NHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNK 219
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVED-----AETLFHSKAREFQLHRDIKTWNVILNGWCV 232
+G+ + ++ LC+ + + E + S L DI ++++
Sbjct: 220 YGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPL--DIVICTILMDSCFK 277
Query: 233 LGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDV 292
GN +A VWK+ M+ K N D
Sbjct: 278 NGNVVQALEVWKE-MSQK------------------------------------NVPADS 300
Query: 293 VICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVED 352
V+ N II LC + A DM +RG P+V TYN+LI LCK + ++ +L
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGT 360
Query: 353 MERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDD---IYNLVLRLYMKW 409
M+ G P+ ++Y ++ L +V E + S ++N+V+ Y ++
Sbjct: 361 MQ--NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRY 418
Query: 410 DNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTE 469
+ + M G P+ + +IHG+ + G++ DA EM S + + T
Sbjct: 419 GDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTY 478
Query: 470 KLVIS 474
L++
Sbjct: 479 NLLLG 483
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 123/282 (43%), Gaps = 8/282 (2%)
Query: 116 VCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTR 175
+C ++D K + +V+ EMS + + ++ ++R ++ + A
Sbjct: 267 ICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDM 326
Query: 176 EQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGN 235
+ G++ D+ + TL+ LC+ ++A L H + + D ++ VI+ G C+ G+
Sbjct: 327 VKRGVNPDVFTYNTLISALCKEGKFDEACDL-HGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Query: 236 AHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVIC 295
+ A ++ S P++ + I M + G KP+V
Sbjct: 386 VNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYG--VKPNVYTN 443
Query: 296 NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
N +I R+ +A V +M+ P+ TYN L+ C + + ++L ++M R
Sbjct: 444 NALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLR 503
Query: 356 KKGSCMPNAVTYSCLLNSL--KG-PEEVPGVLERMERNGCSL 394
+ C P+ +TY+ L+ L KG ++ +L R++ G ++
Sbjct: 504 R--GCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITI 543
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 11/193 (5%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
P ++ N +++ LC + +A + ++M+E G PN +YN+LIK LC + ++K L
Sbjct: 154 PGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYL 213
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSL--KG------PEEVPGVLERMERNGCSLSDDIYNL 401
M K PN VT + ++++L KG + + +L+ + N L I +
Sbjct: 214 FNTMN--KYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANA-PLDIVICTI 270
Query: 402 VLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
++ K N + W EM + D Y ++I G +G M A + +M +G
Sbjct: 271 LMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRG 330
Query: 462 MVAEPRTEKLVIS 474
+ + T +IS
Sbjct: 331 VNPDVFTYNTLIS 343
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 15/186 (8%)
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
I+ LC + ++ AL + + M G P + T+N L+ LCK +EK LV +M
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 358 GSCMPNAVTYSCLLNSLKGPEEVPGVLE----------RMERNGCSLSDDIYNLVLRLYM 407
S PN V+Y+ L+ L V L R R C++ ++ L + +
Sbjct: 187 PS--PNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNII--VHALCQKGVI 242
Query: 408 KWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPR 467
+N+ L + D + N D TI++ ++NG + A+ ++EM+ K + A+
Sbjct: 243 GNNNKKLLEEILDSSQANA-PLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV 301
Query: 468 TEKLVI 473
++I
Sbjct: 302 VYNVII 307
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 160/378 (42%), Gaps = 13/378 (3%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGL-VNE 149
+ W AL F+ + Y P ++L +LGK + ++FDEM EGL
Sbjct: 101 KKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLE-EGLEPTV 159
Query: 150 DTFSTLLRRFAAAHKVEEAISMFYTREQF-GLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+ ++ LL + ++ +++A S+ + F D+ + TLL + ++L+
Sbjct: 160 ELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYK 219
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASK-CRPDLFTYATFIXXXXX 267
+ E + + T N++L+G+ +G + ++V D++ S C+PD++T +
Sbjct: 220 -EMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGN 278
Query: 268 XXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
+ N G +P+ N +I + K+ + V + M++
Sbjct: 279 MGKIDMMESWYEKFRNFG--IEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTT 336
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVL 384
+TYN++I+ + + + EL D R +G + T+ CL+N +V +
Sbjct: 337 STYNNIIEAFADVGDAKNM-ELTFDQMRSEG-MKADTKTFCCLINGYANAGLFHKVISSV 394
Query: 385 ERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYEN 444
+ + + YN V+ K D+ + + + M+ C D R++ IM+ YE
Sbjct: 395 QLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEA-YEK 453
Query: 445 GKMKDAMRYFREMTSKGM 462
M D + Y + K M
Sbjct: 454 EGMNDKIYYLEQERQKLM 471
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 127/319 (39%), Gaps = 21/319 (6%)
Query: 137 FDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMF-YTREQFGLDLDLDAFRTLLMWLC 195
D S G VN T + L A + +A+ +F REQ + LL+ L
Sbjct: 78 LDRRSKANGWVN--TVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLG 135
Query: 196 RYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMAS--KCRP 253
+ A+ LF E L ++ + +L + +A + D M S +C+P
Sbjct: 136 KSGQPNRAQKLFDEMLEE-GLEPTVELYTALLAAYTRSNLIDDAFSIL-DKMKSFPQCQP 193
Query: 254 DLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALE 313
D+FTY+T + ++ M + P+ V N ++ R + +
Sbjct: 194 DVFTYSTLLKACVDASQFDLVDSLYKEM--DERLITPNTVTQNIVLSGYGRVGRFDQMEK 251
Query: 314 VFQDM-KERGCEPNVATYN---SLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSC 369
V DM C+P+V T N S+ ++ KI ME YE + P T++
Sbjct: 252 VLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNF-----GIEPETRTFNI 306
Query: 370 LLNSLKGP---EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNG 426
L+ S +++ V+E M + + YN ++ + + + T+D+M G
Sbjct: 307 LIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEG 366
Query: 427 CGPDRRSYTIMIHGHYENG 445
D +++ +I+G+ G
Sbjct: 367 MKADTKTFCCLINGYANAG 385
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 311 ALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCL 370
A ++F +M E G EP V Y +L+ + ++ + +++ M + C P+ TYS L
Sbjct: 143 AQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKM-KSFPQCQPDVFTYSTL 201
Query: 371 LNSLKGPEE---VPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEM-ERNG 426
L + + V + + M+ + + N+VL Y + D + K +M
Sbjct: 202 LKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTA 261
Query: 427 CGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
C PD + I++ GK+ ++ + + G+ E RT ++I
Sbjct: 262 CKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIG 309
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 10/185 (5%)
Query: 296 NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
N +I + C + ++ EAL VF M + G PNV ++N +I CK M +L+ M
Sbjct: 222 NLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGM 281
Query: 356 KKGSCM-PNAVTYSCLLNS------LKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMK 408
G+ + PNAVTY+ ++N L E + G M ++G ++ Y ++ Y +
Sbjct: 282 MSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRG---DMVKSGVDCNERTYGALVDAYGR 338
Query: 409 WDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRT 468
+ D + DEM G + Y +++ + G ++ AM R+M SK M + T
Sbjct: 339 AGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFT 398
Query: 469 EKLVI 473
+ +V+
Sbjct: 399 QAIVV 403
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 159/395 (40%), Gaps = 46/395 (11%)
Query: 88 RRHRSDWKPALVFFNWASKADSYAPTSR----VCNEILDILGKMSRFEELHQVFDEMSHR 143
R RS K AL F+NW ++++ A + C I ++G RF++ + +
Sbjct: 65 REFRSSPKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGS-RRFDDALSIMANLMSV 123
Query: 144 EG--LVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVE 201
EG L S L+R + A D F +L+ + +
Sbjct: 124 EGEKLSPLHVLSGLIRSYQACGSSP------------------DVFDSLVRACTQNGDAQ 165
Query: 202 DA-ETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWK---DIMASKCRPDLFT 257
A E + ++A F + + N + C+L N +E R WK ++ + ++ T
Sbjct: 166 GAYEVIEQTRAEGFCV--SVHALNNFMG--CLL-NVNEIDRFWKVYKEMDSLGYVENVNT 220
Query: 258 YATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQD 317
+ I F M C P+VV N +ID C + AL++
Sbjct: 221 FNLVIYSFCKESKLFEALSVFYRMLK--CGVWPNVVSFNMMIDGACKTGDMRFALQLLGK 278
Query: 318 MKERG---CEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL 374
M PN TYNS+I CK R++ + DM + C N TY L+++
Sbjct: 279 MGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDC--NERTYGALVDAY 336
Query: 375 K---GPEEVPGVLERMERNGCSLSDDIYN-LVLRLYMKWDNQDGLRKTWDEMERNGCGPD 430
+E + + M G ++ IYN +V L+M+ D +G +M D
Sbjct: 337 GRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGD-IEGAMSVLRDMNSKNMQID 395
Query: 431 RRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
R + I++ G NG +K+A+ + R+++ K +V +
Sbjct: 396 RFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVED 430
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 142/332 (42%), Gaps = 19/332 (5%)
Query: 117 CNE-----ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
CNE ++D G+ +E ++ DEM+ + +VN +++++ +E A+S+
Sbjct: 324 CNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSV 383
Query: 172 FYTREQFGLDLDLDAFRTLLM--WLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
R+ ++ +D F ++ LCR +V++A F + E +L DI N +++
Sbjct: 384 L--RDMNSKNMQIDRFTQAIVVRGLCRNGYVKEA-VEFQRQISEKKLVEDIVCHNTLMHH 440
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCK 289
+ A ++ ++ D ++ T I + GM N
Sbjct: 441 FVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIK--MNKT 498
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
++VI N I++ L + A V M+ + ++ TYN+L+ K +E+ ++
Sbjct: 499 SNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDI 554
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLY 406
+ M+++ G + VT++ ++N L E+ VL+ M G Y ++ +
Sbjct: 555 LSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSF 614
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMI 438
K +Q+ + + D + G P Y ++
Sbjct: 615 SKHRSQEKVVELHDYLILQGVTPHEHIYLSIV 646
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/365 (18%), Positives = 151/365 (41%), Gaps = 9/365 (2%)
Query: 105 SKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHK 164
++A+ + + N + L ++ + +V+ EM + N +TF+ ++ F K
Sbjct: 174 TRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESK 233
Query: 165 VEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ--LHRDIKT 222
+ EA+S+FY + G+ ++ +F ++ C+ + A L + + T
Sbjct: 234 LFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVT 293
Query: 223 WNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMW 282
+N ++NG+C G A+R+ D++ S + TY + M
Sbjct: 294 YNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMT 353
Query: 283 NEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRR 342
++G + VI N I+ L + + A+ V +DM + + + T +++ LC+
Sbjct: 354 SKG--LVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGY 411
Query: 343 MEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVP---GVLERMERNGCSLSDDIY 399
+++ E + KK + + V ++ L++ +++ +L M G SL +
Sbjct: 412 VKEAVEFQRQISEKK--LVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISF 469
Query: 400 NLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTS 459
++ Y+K + + +D M + + Y +++G + G A M
Sbjct: 470 GTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEI 529
Query: 460 KGMVA 464
K +V
Sbjct: 530 KDIVT 534
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 160/374 (42%), Gaps = 17/374 (4%)
Query: 100 FFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFD---EMSHRE--GLVNEDTFST 154
F WA++ + T+ + +L + +R + + ++D E+ +E G++N + +
Sbjct: 177 FLKWATQNEEITVTTSLVESLLVAIASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNE 236
Query: 155 LLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREF 214
L+ F K + A +F E+FG + + L LC+ ++ A ++ +
Sbjct: 237 LIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSG 296
Query: 215 QLHRDIKTWNVILNGWCVLGNAHEAKRVWK-DIMASKCRPDLFTYATFIXXXXXXXXXXX 273
L + N+I +C G A EA V++ K P F AT I
Sbjct: 297 VLSEGEQMGNII-TWFCKEGKAEEAYSVYELAKTKEKSLPPRFV-ATLITALCKNDGTIT 354
Query: 274 XXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSL 333
G + G + + + +I +LC + V +A + DM +G P A +N L
Sbjct: 355 FAQEMLGDLS-GEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFN-L 412
Query: 334 IKHLC-KIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL-KGP--EEVPGVLERMER 389
+ H C K +++ E+++ ME + P+ TY+ +++ KG +E +L ++
Sbjct: 413 VVHACSKTGDLDEAKEVLKLMESR--GLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKK 470
Query: 390 NGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGH-YENGKMK 448
LS Y+ ++R Y K + D K +EM+R G P+ Y +I + +
Sbjct: 471 KHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWE 530
Query: 449 DAMRYFREMTSKGM 462
A F EM KG+
Sbjct: 531 KAEVLFEEMKQKGL 544
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 12/262 (4%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
+++ AP +CN ++ ++ RFEE +VF + R+ + ++ TF+++L + K
Sbjct: 309 QSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKF 368
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDA---ETLFHSKAREFQLHRDIKT 222
+ R G+ D D L+ C K ++ + L ++F L D T
Sbjct: 369 D-----LVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFAL--DCYT 421
Query: 223 WNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMW 282
+ V L+ C G A +++K I+ K D ++ I F+
Sbjct: 422 YTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCI 481
Query: 283 NEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRR 342
E DVV I L KR+ EA + DMKE G PN TY ++I LCK +
Sbjct: 482 LE--KYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKE 539
Query: 343 MEKVYELVEDMERKKGSCMPNA 364
EKV +++ + ++ PN
Sbjct: 540 TEKVRKILRECIQEGVELDPNT 561
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 162/381 (42%), Gaps = 25/381 (6%)
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVE 166
+ + P +IL + + E QV M V+ + +S L+ F + + +
Sbjct: 205 GEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQ 264
Query: 167 EAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
+A+ +F Q G +L + +L+ V++A T+ SK + L DI N++
Sbjct: 265 KAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVL-SKVQSEGLAPDIVLCNLM 323
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC 286
++ + LG EA++V+ + K PD +T+A+ + G+ +
Sbjct: 324 IHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTD-- 381
Query: 287 NCKPDVVICNCIIDALCFKK--RVPEALEVFQDMKERGCEPNVATYNSLIKHLCKI---R 341
D+V N + + CF K AL+V M + + TY + LC+ R
Sbjct: 382 ---FDLVTGNLLSN--CFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPR 436
Query: 342 RMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSD---DI 398
K+Y+++ ++ KK +A +S +++SL + + +R C L D+
Sbjct: 437 AAIKMYKII--IKEKK---HLDAHFHSAIIDSLIELGKYNTAVHLFKR--CILEKYPLDV 489
Query: 399 --YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFRE 456
Y + ++ ++ + +M+ G P+RR+Y +I G + + + + RE
Sbjct: 490 VSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRE 549
Query: 457 MTSKGMVAEPRTEKLVISMNS 477
+G+ +P T+ V S+ S
Sbjct: 550 CIQEGVELDPNTKFQVYSLLS 570
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 3/244 (1%)
Query: 94 WKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
++ L FF WA S+ ++ + + DIL ++ + + V + E VN T
Sbjct: 75 FQSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIESYRKEECFVNVKTMR 134
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
+L A+ +EA+ + +F + D A+ ++ + A+ L +
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIK-EMDC 193
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXX 273
L+ D+ T+ ++NG+C G +A R+ K++ C + TY+ +
Sbjct: 194 VGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMER 253
Query: 274 XXXXFRGMWNE--GCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYN 331
M E G P+ V +I A C K+RV EAL V M RGC PN T
Sbjct: 254 ALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTAC 313
Query: 332 SLIK 335
LI+
Sbjct: 314 VLIQ 317
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
PDV+ +I+ C ++ +A + ++M + C N TY+ +++ +CK ME+ EL
Sbjct: 198 PDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALEL 257
Query: 350 VEDMERKKGSCM--PNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLR 404
+ +ME++ G + PNAVTY+ ++ + + EE VL+RM GC + + + VL
Sbjct: 258 LAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGC-MPNRVTACVLI 316
Query: 405 LYMKWDNQD--GLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
+ +++D L K D++ + G ++ + ++A + FR M +G+
Sbjct: 317 QGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGV 376
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKV 346
N D V N +I K + A + ++M G P+V TY S+I C +++
Sbjct: 160 NVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDA 219
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERM-----ERNGCSLSDD--IY 399
+ L ++M K C+ N+VTYS +L + ++ LE + E G +S + Y
Sbjct: 220 WRLAKEMS--KHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTY 277
Query: 400 NLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYEN 444
LV++ + + + D M GC P+R + ++I G EN
Sbjct: 278 TLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLEN 322
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 139/353 (39%), Gaps = 32/353 (9%)
Query: 152 FSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKA 211
F+TL+ F +++ MF + G+ ++ + ++ C+ +V+ A LF +
Sbjct: 310 FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNT 369
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
+ R++ + ++ G+ G +A + ++ + PD TY +
Sbjct: 370 GSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHEL 429
Query: 272 XXXXXXFRGMWNEGCNCKPDV---------------------------VICNCIIDALCF 304
+ + + GC P V V + ALC
Sbjct: 430 KYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCS 489
Query: 305 KKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNA 364
++ AL + M GC P +YNS+IK L + +E + LV ++ +P+
Sbjct: 490 QRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQEL--DFVPDV 547
Query: 365 VTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDE 421
TY ++N L + +++ ME G + IY+ ++ K +T+ +
Sbjct: 548 DTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAK 607
Query: 422 MERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
M +G PD +Y IMI+ + NG++ +A E+ + T ++IS
Sbjct: 608 MLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLIS 660
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Query: 224 NVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWN 283
N I+ G+C G EA + + P+L TY + F
Sbjct: 798 NTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF----- 852
Query: 284 EGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRM 343
EG NC+PD V+ + ++ LC KR +AL + +M++ G PN +Y L++ LC R
Sbjct: 853 EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLT 912
Query: 344 EKVYELVEDM 353
+ ++V+DM
Sbjct: 913 MEAVKVVKDM 922
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/340 (19%), Positives = 140/340 (41%), Gaps = 6/340 (1%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N ++ L + + E+L + + + + + + DT+ ++ + + A ++ E+
Sbjct: 516 NSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEE 575
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
GL + + +++ L + V +AE F +K E + D + +++N + G
Sbjct: 576 LGLRPTVAIYSSIIGSLGKQGRVVEAEETF-AKMLESGIQPDEIAYMIMINTYARNGRID 634
Query: 238 EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNC 297
EA + ++++ RP FTY I M +G + P+VV+
Sbjct: 635 EANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLS--PNVVLYTA 692
Query: 298 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCK-IRRMEKVYELVEDMERK 356
+I K + +F M E + + Y +L+ L + + R +K +VE + K
Sbjct: 693 LIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEK 752
Query: 357 KGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIY--NLVLRLYMKWDNQDG 414
+ + +SL +E + + S+ ++Y N ++ Y D
Sbjct: 753 LLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDE 812
Query: 415 LRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYF 454
+ M++ G P+ +YTI++ H E G ++ A+ F
Sbjct: 813 AYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF 852
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 8/175 (4%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
P++ + N II C R+ EA + M++ G PN+ TY L+K + +E +L
Sbjct: 792 PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL 851
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLY 406
E +C P+ V YS LL L K P + ++ M+++G + + D Y +L+
Sbjct: 852 FEGT-----NCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCL 906
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
K +M P ++T +I+ E K+++A F M G
Sbjct: 907 CYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 124/309 (40%), Gaps = 16/309 (5%)
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVE 166
A YAP+ + ++D L RF E F+++ R + L + +
Sbjct: 159 ASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLN 218
Query: 167 EAISMFYTREQFG-LDLDLDAFRTLLMWLCRYKHVEDAETLF-HSKAREFQLHRDIKTWN 224
EAI M T + L ++ +++L C+ +AE LF H + + + D +
Sbjct: 219 EAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGY--YVDKVMYT 276
Query: 225 VILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNE 284
++ +C N A R++ ++ D + T I F M +
Sbjct: 277 CLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKK 336
Query: 285 GCNCKPDVVICNCIIDALCFKKRVPEALEVF-QDMKERGCEPNVATYNSLIKHLCKIRRM 343
G + +V + +I + C + V AL +F + NV Y +LI K M
Sbjct: 337 G--VQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGM 394
Query: 344 EKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVP---GVLERMERNGCSLS----D 396
+K +L+ M +P+ +TY LL L E+ +L+ + NGC ++ D
Sbjct: 395 DKAVDLL--MRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVID 452
Query: 397 DIYNLVLRL 405
D+ N+ +++
Sbjct: 453 DLGNIEVKV 461
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 14/187 (7%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
+P V I + II +L + RV EA E F M E G +P+ Y +I + R+++ E
Sbjct: 579 RPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANE 638
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNS---LKGPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
LVE E K P++ TY+ L++ + E+ L++M +G S + +Y ++
Sbjct: 639 LVE--EVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGH 696
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
++K + + M N D +Y ++ G + R + ++ E
Sbjct: 697 FLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLW---------RAMARKKKRQVIVE 747
Query: 466 PRTEKLV 472
P EKL+
Sbjct: 748 PGKEKLL 754
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 110/295 (37%), Gaps = 34/295 (11%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEI-LDILGKMSRFEELHQVFDEMSHREGLV 147
R D AL + S + +SR E+ + L K RF ++ + + + +
Sbjct: 41 RKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIK 100
Query: 148 NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF 207
E +STL+R + A A+ F +Q+G +F LL K+ + LF
Sbjct: 101 EEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLF 160
Query: 208 HSKAREF-QLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXX 266
+ + ++ D ++ +++ +C G +A + + + + T +
Sbjct: 161 DEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLY 220
Query: 267 XXXXXXXXXXXFRGMWNEGC--------------------------------NCKPDVVI 294
+ M +GC KPD +
Sbjct: 221 KKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTIS 280
Query: 295 CNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
N ++ A C + + EA +V++ ++ C PN AT+ +LI HLC R E+ Y +
Sbjct: 281 YNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAI 335
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 106/267 (39%), Gaps = 36/267 (13%)
Query: 108 DSYA-PTSRVC-NEILDILGKMSRFEELHQVFDEMSHREGLVNED--TFSTLLRRFAAAH 163
D Y P S V N +L+ F+++ Q+FDE+ R + D ++ L++ + +
Sbjct: 129 DQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSG 188
Query: 164 KVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTW 223
E+AI + + G+++ AF T+L L + +E A+ L W
Sbjct: 189 TPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNL----------------W 232
Query: 224 NVILNGWCVLGNA--------------HEAKRVWKDIMASKCRPDLFTYATFIXXXXXXX 269
N ++ C L NA K + +++ + +PD +Y +
Sbjct: 233 NEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERG 292
Query: 270 XXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVAT 329
+ G+ EG NC P+ +I LC+ + + +F+ P+ T
Sbjct: 293 MLDEAKKVYEGL--EGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNT 350
Query: 330 YNSLIKHLCKIRRMEKVYELVEDMERK 356
L+ L + ++ + L+ +++K
Sbjct: 351 LKHLVVGLVENKKRDDAKGLIRTVKKK 377
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
PD + +I + C +A+E+ + M+ +G E + +++ L K +E L
Sbjct: 172 PDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNL 231
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSLK-GPEEVPGVLERMERNGCSLSDDIYNLVLRLYMK 408
+M KKG + NA ++++ K PE V ++E M G YN ++ Y +
Sbjct: 232 WNEM-VKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCE 290
Query: 409 WDNQDGLRKTWDEMERNGCGPDRRSYTIMI 438
D +K ++ +E N C P+ ++ +I
Sbjct: 291 RGMLDEAKKVYEGLEGNNCAPNAATFRTLI 320
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 70/155 (45%), Gaps = 4/155 (2%)
Query: 311 ALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCL 370
A+ F+ M + G + ++N+L+ + +KV +L +++ ++ +P+ ++Y L
Sbjct: 121 AMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGIL 180
Query: 371 LNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGC 427
+ S PE+ ++ +M+ G ++ + +L K + W+EM + GC
Sbjct: 181 IKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGC 240
Query: 428 GPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
D +Y + I + + EM+S G+
Sbjct: 241 ELDNAAYNVRIMSAQKESPER-VKELIEEMSSMGL 274
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 8/168 (4%)
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCE--PNVATYNSLIKHLCKIRRMEKVYEL 349
V N +++A K + ++F ++ +R + P+ +Y LIK C EK E+
Sbjct: 137 AVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEI 196
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSL--KGPEEVPGVL-ERMERNGCSLSDDIYNLVLRLY 406
+ M+ K + ++ +L+SL KG EV L M + GC L + YN+ + +
Sbjct: 197 MRQMQGKGMEV--TTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI-MS 253
Query: 407 MKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYF 454
+ ++ + +++ +EM G PD SY ++ + E G + +A + +
Sbjct: 254 AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVY 301
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 7/242 (2%)
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXF 278
D +++++ G+ LG E RV+++++ S + T + +
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 279 RGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLC 338
M G + P+ N + + C E + + M+E G EP++ TYN+L+ C
Sbjct: 225 SVMCRVGIH--PNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYC 282
Query: 339 KIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLS 395
+ R+++ + L + M R++ +P+ VTY+ L+ L E RM G
Sbjct: 283 RRGRLKEAFYLYKIMYRRR--VVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPD 340
Query: 396 DDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFR 455
YN ++ Y K +K EM N PDR + +++ G G++ A+ +
Sbjct: 341 CMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVV 400
Query: 456 EM 457
E+
Sbjct: 401 EL 402
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 111/283 (39%), Gaps = 21/283 (7%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEM----SHRE 144
R +SD A+ FF W P +L IL +F Q E+ S +E
Sbjct: 88 RFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKE 147
Query: 145 GL------------VNED--TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTL 190
+ N D F L++ + VEE +F G + + L
Sbjct: 148 EVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHL 207
Query: 191 LMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASK 250
L L + +ED ++ R +H + T+N++ N +C N E + +
Sbjct: 208 LNGLLKLDLMEDCWQVYSVMCR-VGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEG 266
Query: 251 CRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPE 310
PDL TY T + ++ M+ PD+V +I LC RV E
Sbjct: 267 FEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRR--RVVPDLVTYTSLIKGLCKDGRVRE 324
Query: 311 ALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDM 353
A + F M +RG +P+ +YN+LI CK M++ +L+ +M
Sbjct: 325 AHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEM 367
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 9/235 (3%)
Query: 126 KMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLD 185
K+ EE +VF E+ V+ T + LL +E+ ++ + G+ +
Sbjct: 178 KLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTY 237
Query: 186 AFRTLLMWLCR---YKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRV 242
F L C ++ V+D F K E D+ T+N +++ +C G EA +
Sbjct: 238 TFNILTNVFCNDSNFREVDD----FLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYL 293
Query: 243 WKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDAL 302
+K + + PDL TY + I F M + G KPD + N +I A
Sbjct: 294 YKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGI--KPDCMSYNTLIYAY 351
Query: 303 CFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 357
C + + ++ ++ +M P+ T +++ + R+ V ++ R K
Sbjct: 352 CKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLK 406
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 133/314 (42%), Gaps = 18/314 (5%)
Query: 148 NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF 207
N T+ +++ + ++E+A +F R F L ++ A+ +L + +EDA F
Sbjct: 143 NTVTWIEMIKGYGKRIEIEKARELF-ERMPFELK-NVKAWSVMLGVYVNNRKMEDARKFF 200
Query: 208 HSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXX 267
++ W+++++G+ +G+ HEA+ ++ + A DL + T I
Sbjct: 201 EDIPE-----KNAFVWSLMMSGYFRIGDVHEARAIFYRVFAR----DLVIWNTLIAGYAQ 251
Query: 268 XXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
F M EG +PD V + I+ A R+ EV + RG E N
Sbjct: 252 NGYSDDAIDAFFNMQGEGY--EPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQ 309
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERM 387
N+LI K +E + E + + +C + + SCL KG E + + M
Sbjct: 310 FVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMI--SCLAIHGKGKEALE-MFSTM 366
Query: 388 ERNGCSLSDDIYNLVLRLYMKWDN-QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGK 446
E + + VL + +GL K + EM+ P+ + + +IH +GK
Sbjct: 367 ESLDLKPDEITFIAVLTACVHGGFLMEGL-KIFSEMKTQDVKPNVKHFGCLIHLLGRSGK 425
Query: 447 MKDAMRYFREMTSK 460
+K+A R +EM K
Sbjct: 426 LKEAYRLVKEMHVK 439
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 14/279 (5%)
Query: 152 FSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKA 211
++TL+ +A ++AI F+ + G + D ++L C D HS
Sbjct: 242 WNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILS-ACAQSGRLDVGREVHSLI 300
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
+ + N +++ + G+ A V++ I + + I
Sbjct: 301 NHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR----SVACCNSMISCLAIHGKG 356
Query: 272 XXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYN 331
F M E + KPD + ++ A + E L++F +MK + +PNV +
Sbjct: 357 KEALEMFSTM--ESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFG 414
Query: 332 SLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLN-SLKGPEEVPGVLERMERN 390
LI L + ++++ Y LV++M K + A+ +C ++ + E+V ++E
Sbjct: 415 CLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSI 474
Query: 391 GCSLSDDIYNLVLRLYM---KWDNQDGLRKTWDEMERNG 426
S S++ + LY +W + LR EME+ G
Sbjct: 475 TNSYSENHLASISNLYAHTERWQTAEALRV---EMEKRG 510
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 144/382 (37%), Gaps = 103/382 (26%)
Query: 96 PALVF--FNWASKADSYAPTSRVCNEILDI--LGKMSRFEELHQVFDEMSHREGLVNEDT 151
P L F FNWAS+ + T C+ + I LG ++E+ + +++ + NE+
Sbjct: 152 PFLCFHLFNWASQQPRF--THENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENL 209
Query: 152 FSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKA 211
+++++ F A K+ A+++F +H+ ++ L
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIF-------------------------RHMVTSKNL----- 239
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
+ I+T++++ GN V+ + + S
Sbjct: 240 ---ECRPTIRTYHILFKALLGRGNNSYINHVYMETVRS---------------------- 274
Query: 272 XXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKE-RGCEPNVATY 330
FR M + G +PDV NC++ V +AL +F M CEPN TY
Sbjct: 275 -----LFRQMVDSGI--EPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTY 327
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERN 390
+ LI LC R EL+ +M+ K +PN +Y+ L+N+
Sbjct: 328 DYLIHGLCAQGRTINARELLSEMKGK--GFVPNGKSYNSLVNAF---------------- 369
Query: 391 GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDA 450
+LS +I D ++ W EM NG D SY ++ GK +A
Sbjct: 370 --ALSGEI-------------DDAVKCLW-EMIENGRVVDFISYRTLVDESCRKGKYDEA 413
Query: 451 MRYFREMTSKGMVAEPRTEKLV 472
R + K +V +KLV
Sbjct: 414 TRLLEMLREKQLVDRDSYDKLV 435
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 115/286 (40%), Gaps = 13/286 (4%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEI-LDILGKMSRFEELHQVFDEMSHREGLV 147
R D AL + S + +SR E+ + L K RF ++ + + + +
Sbjct: 41 RKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIK 100
Query: 148 NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF 207
E STL+R + A + A+ MF ++ G + +F LL E LF
Sbjct: 101 TETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLF 160
Query: 208 HSKAREF-QLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXX 266
+ + + D ++ +++ +C G +A + +D+ + + T +
Sbjct: 161 DEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLY 220
Query: 267 XXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEAL-EVFQDMKERGCEP 325
+ M N+GC+ D + N + + K PE + E+ ++M G +P
Sbjct: 221 KNGLVDEAESLWIEMVNKGCDL--DNTVYN--VRLMNAAKESPERVKELMEEMSSVGLKP 276
Query: 326 NVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLL 371
+ +YN L+ C M + ++ E +E+ PNA T+ L+
Sbjct: 277 DTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ------PNAATFRTLI 316
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 11/172 (6%)
Query: 290 PDVVICNCIIDALCFK----KRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
P V+ + A C +RVP+ + F + P+ +Y LIK C + EK
Sbjct: 134 PRTVVSFNALLAACLHSDLFERVPQLFDEFPQ-RYNNITPDKISYGMLIKSYCDSGKPEK 192
Query: 346 VYELVEDMERKKGSCMPNAVTYSCLLNSLKG---PEEVPGVLERMERNGCSLSDDIYNLV 402
E++ DME K + ++ +L SL +E + M GC L + +YN+
Sbjct: 193 AMEIMRDMEVK--GVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVR 250
Query: 403 LRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYF 454
L K ++ + +++ +EM G PD SY ++ + G M +A + +
Sbjct: 251 LMNAAK-ESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVY 301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 3/161 (1%)
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKV 346
N PD + +I + C + +A+E+ +DM+ +G E + + +++ L K +++
Sbjct: 169 NITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEA 228
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLNSLK-GPEEVPGVLERMERNGCSLSDDIYNLVLRL 405
L +M KG + N V L+N+ K PE V ++E M G YN ++
Sbjct: 229 ESLWIEM-VNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTA 287
Query: 406 YMKWDNQDGLRKTWDEMERNGCGPDRR-SYTIMIHGHYENG 445
Y +K ++ +E+ R + + I+G Y+ G
Sbjct: 288 YCVKGMMSEAKKVYEGLEQPNAATFRTLIFHLCINGLYDQG 328
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKER-GCEPNVATYNSLIKHLCKIRRMEK 345
+CK V+ N ++ A K+ E+F ++ + +P++ +YN+LIK LC+ + +
Sbjct: 139 DCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPE 198
Query: 346 VYELVEDMERKKGSCMPNAVTYSCLLNS--LKGPEEV-PGVLERMERNGCSLSDDIYNLV 402
L++++E K P+ VT++ LL S LKG E+ + +M ++ YN
Sbjct: 199 AVALLDEIENK--GLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNAR 256
Query: 403 LRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
L L + E++ +G PD S+ MI G GKM +A +++E+ G
Sbjct: 257 LLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHG 315
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG 285
I++ + G A++V++++ C+ + ++ + F + +
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGK- 173
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEK 345
+ KPD+V N +I ALC K +PEA+ + +++ +G +P++ T+N+L+ ++
Sbjct: 174 LSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS----SYLKG 229
Query: 346 VYELVEDMERK--KGSCMPNAVTYSCLLNSLKG---PEEVPGVLERMERNGCSLSDDIYN 400
+EL E++ K + + + TY+ L L +E+ + ++ +G +N
Sbjct: 230 QFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFN 289
Query: 401 LVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
++R + D + E+ ++G PD+ ++ +++ + G + A+ F+E SK
Sbjct: 290 AMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSK 349
Query: 461 G-MVAEPRTEKLV 472
+V + ++LV
Sbjct: 350 RYLVGQTTLQQLV 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 4/234 (1%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTRE-QF 178
I+ + GK FE +VF+EM +R+ + +F+ LL + + K + +F +
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 179 GLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHE 238
+ D+ ++ TL+ LC + +A L + L DI T+N +L + G
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENK-GLKPDIVTFNTLLLSSYLKGQFEL 233
Query: 239 AKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCI 298
+ +W ++ D+ TY + F + G KPDV N +
Sbjct: 234 GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASG--LKPDVFSFNAM 291
Query: 299 IDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVED 352
I + ++ EA ++++ + G P+ AT+ L+ +CK E EL ++
Sbjct: 292 IRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKE 345
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 129/351 (36%), Gaps = 70/351 (19%)
Query: 146 LVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAET 205
L + D+ S ++ A+KV+ A+++ + Q GL + ++ +C+ E++
Sbjct: 436 LPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLK 495
Query: 206 LFHS----------------------------------KAREFQLHRDIKTWNVILNGWC 231
L K R + IK ++ C
Sbjct: 496 LLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLC 555
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
G A +A + D+ + I FR + G +C PD
Sbjct: 556 ENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANG-HC-PD 613
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
V+ + +I ALC R EA +F +M +G +P VATYNS+I CK +++ +
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIV 673
Query: 352 DMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDN 411
M + + P+ +TY+ L++ L + R
Sbjct: 674 RMYEDEKN--PDVITYTSLIHGLCASGRPSEAIFR------------------------- 706
Query: 412 QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
W+EM+ C P+R ++ +I G + G +A+ YFREM K M
Sbjct: 707 -------WNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEM 750
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 97/263 (36%), Gaps = 5/263 (1%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + N I++ + K R EE ++ EM ++ T + + A A+ +
Sbjct: 472 PGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDL 531
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+G + + L+ LC DA A E L + + I +G
Sbjct: 532 LKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAI-DGLI 590
Query: 232 VLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPD 291
+++DI A+ PD+ Y I F M ++G KP
Sbjct: 591 KNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL--KPT 648
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
V N +ID C + + L M E P+V TY SLI LC R +
Sbjct: 649 VATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWN 708
Query: 352 DMERKKGSCMPNAVTYSCLLNSL 374
+M+ K C PN +T+ L+ L
Sbjct: 709 EMKGK--DCYPNRITFMALIQGL 729
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 119/306 (38%), Gaps = 27/306 (8%)
Query: 190 LLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDI--- 246
LL+ C D + K R ++ I T N ++ A ++++++
Sbjct: 167 LLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGL 226
Query: 247 ----------MASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICN 296
M K +P+ T+ + + +R M E C P+V N
Sbjct: 227 DDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEE-VGCSPNVYSYN 285
Query: 297 CIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
+++A C + + EA +V+++MK RG ++ YN++I LC + K EL DM K
Sbjct: 286 VLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLK 345
Query: 357 KGSCMPNAVTYSCLLNSLKGPEEVPG---VLERMERNGCSLSDDIYNLVLRLYMKWDNQD 413
C +TY L+N +V V M+R G D + + D++D
Sbjct: 346 GIEC--TCLTYEHLVNGYCKAGDVDSGLVVYREMKRKG--FEADGLTIEALVEGLCDDRD 401
Query: 414 GLRKTW------DEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPR 467
G R D + P R Y +++ E+GKM A+ EM KG
Sbjct: 402 GQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQE 461
Query: 468 TEKLVI 473
T + I
Sbjct: 462 TYRAFI 467
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 20/200 (10%)
Query: 175 REQFGLD-LDLD--------------AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRD 219
RE FGLD + +D F ++++ R E E ++ E +
Sbjct: 221 REVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPN 280
Query: 220 IKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFR 279
+ ++NV++ +C G EA++VW+++ D+ Y T I FR
Sbjct: 281 VYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFR 340
Query: 280 GMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCK 339
M +G C + +++ C V L V+++MK +G E + T +L++ LC
Sbjct: 341 DMGLKGIECT--CLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCD 398
Query: 340 IRRMEKVYE---LVEDMERK 356
R ++V E +V+D R+
Sbjct: 399 DRDGQRVVEAADIVKDAVRE 418
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 278 FRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHL 337
FR + C + + +I + K + A+ V + ++ RG ++T N+LI +
Sbjct: 148 FRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEV 207
Query: 338 CKIRRMEKVYEL-----------VEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLER 386
+ R Y++ V++ ++ G PNA T++ ++ S E ++ER
Sbjct: 208 SRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETE-MVER 266
Query: 387 M-----ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGH 441
+ E GCS + YN+++ Y K W+EM+ G D +Y MI G
Sbjct: 267 IWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGL 326
Query: 442 YENGKMKDAMRYFREMTSKGM 462
N ++ A FR+M KG+
Sbjct: 327 CSNFEVVKAKELFRDMGLKGI 347
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 135/305 (44%), Gaps = 60/305 (19%)
Query: 190 LLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMAS 249
L+ LC+ + +A LF RD+ TW ++ G+ LG+ EA+ ++ +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLP-----ERDVVTWTHVITGYIKLGDMREARELFDRV--- 103
Query: 250 KCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVP 309
R ++ T+ + F+ M + +VV N +ID R+
Sbjct: 104 DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEM------PERNVVSWNTMIDGYAQSGRID 157
Query: 310 EALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSC 369
+ALE+F +M ER N+ ++NS++K L + R+++ L E M R+ + V+++
Sbjct: 158 KALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRR------DVVSWTA 207
Query: 370 LLNSLKGP---EEVPGVLERM-ERNGCSLSDDIYNLVLRLYM---KWDNQDGLRK----- 417
+++ L +E + + M ERN S +N ++ Y + D D L +
Sbjct: 208 MVDGLAKNGKVDEARRLFDCMPERNIIS-----WNAMITGYAQNNRIDEADQLFQVMPER 262
Query: 418 ---TWDEM--------ERN-GCG-----PDRR--SYTIMIHGHYENGKMKDAMRYFREMT 458
+W+ M E N CG P++ S+T MI G+ EN + ++A+ F +M
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKML 322
Query: 459 SKGMV 463
G V
Sbjct: 323 RDGSV 327
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/379 (18%), Positives = 149/379 (39%), Gaps = 47/379 (12%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
++D L K + +E ++FD M R N +++ ++ +A ++++EA +F Q
Sbjct: 208 MVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRIDEADQLF----QVM 259
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
+ D ++ T++ R + + A LF +++ +W ++ G+ EA
Sbjct: 260 PERDFASWNTMITGFIRNREMNKACGLFDRMP-----EKNVISWTTMITGYVENKENEEA 314
Query: 240 KRVWKDIM-ASKCRPDLFTYATFIXX-------------------------------XXX 267
V+ ++ +P++ TY + +
Sbjct: 315 LNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLN 374
Query: 268 XXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNV 327
R M++ G C+ D++ N +I EA+E++ M++ G +P+
Sbjct: 375 MYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSA 434
Query: 328 ATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERM 387
TY +L+ +EK E +D+ R + S Y+CL++ + V +
Sbjct: 435 VTYLNLLFACSHAGLVEKGMEFFKDLVRDE-SLPLREEHYTCLVDLCGRAGRLKDVTNFI 493
Query: 388 ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKM 447
+ LS Y +L + ++ ++ G D +Y +M + + NGK
Sbjct: 494 NCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGS-DDAGTYVLMSNIYAANGKR 552
Query: 448 KDAMRYFREMTSKGMVAEP 466
++A +M KG+ +P
Sbjct: 553 EEAAEMRMKMKEKGLKKQP 571
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 116/308 (37%), Gaps = 55/308 (17%)
Query: 125 GKMSRFEEL--HQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDL 182
G++ E+L HQ REG + ++ + A ++A+ F+ + +G
Sbjct: 85 GRLDFIEDLLEHQKTLPQGRREGFI-----VRIIMLYGKAGMTKQALDTFFNMDLYGCKR 139
Query: 183 DLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRV 242
+ +F L L + H ++ + D ++N+ + +C LG A
Sbjct: 140 SVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMA 199
Query: 243 WKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWN----EGC------------ 286
+++ S PD+ TY T I G+WN +GC
Sbjct: 200 MREMEKSGLTPDVVTYTTLISALYKHERCVIG----NGLWNLMVLKGCKPNLTTFNVRIQ 255
Query: 287 ---------------------NCKPDVVICNCIIDALCFKKRVPEALE-VFQDMKERGCE 324
+PD + N +I F R P+ E V+ M +G +
Sbjct: 256 FLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGF-FLARFPDMAERVYTAMHGKGYK 314
Query: 325 PNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL--KGP-EEVP 381
PN+ Y ++I +LCK + Y + +D RKK PN T LL L KG ++
Sbjct: 315 PNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKK--WYPNLDTVEMLLKGLVKKGQLDQAK 372
Query: 382 GVLERMER 389
++E + R
Sbjct: 373 SIMELVHR 380
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 163/395 (41%), Gaps = 15/395 (3%)
Query: 92 SDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEM-SHREGLVNED 150
S+ AL FF ++ K+ +PTS + L IL +M F++ + E+ L++
Sbjct: 81 SNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWALMAEVRKDYPNLLSFK 140
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQ--FGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+ S LL + A EE + F E+ F +D F LL C + +++A ++F
Sbjct: 141 SMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFE 200
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXX 268
F + D+KT N++L G+ G+ + + +++ +P+ TY I
Sbjct: 201 KLHSRF--NPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKK 258
Query: 269 XXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVA 328
F M + + V I +I + +A ++F ++ +RG P+
Sbjct: 259 RNFGEALRLFEDM--DRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCG 316
Query: 329 TYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVP--GVLE- 385
YN+L+ L K + +++++ME K P++VT+ + + +E GV E
Sbjct: 317 AYNALMSSLMKCGDVSGAIKVMKEMEEK--GIEPDSVTFHSMFIGMMKSKEFGFNGVCEY 374
Query: 386 --RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYE 443
+M+ ++++L+ + W M G P + ++
Sbjct: 375 YQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCA 434
Query: 444 NGKMKDAMRYFREMTSKGM-VAEPRTEKLVISMNS 477
+ DA + +G V+EP L S++S
Sbjct: 435 RRRANDAFECSWQTVERGRCVSEPVYRMLETSLSS 469
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/388 (17%), Positives = 146/388 (37%), Gaps = 72/388 (18%)
Query: 94 WKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
W+ A+ F + Y P + +++ +LGK + E+ H++F EM + +VN + ++
Sbjct: 130 WESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYT 189
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
L+ ++ + + + A ++ L R K + +
Sbjct: 190 ALVSAYSRSGRFDAAFTL----------------------LERMKSSHNCQP-------- 219
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXX 273
D+ T+++++ + + + + + D+ RP+ TY T I
Sbjct: 220 -----DVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVE 274
Query: 274 XXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSL 333
M E +CKPD N + A ++ ++ + G EPN+ T+N L
Sbjct: 275 MESTLIQMLGED-DCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNIL 333
Query: 334 IKHLCKIRRMEKVYELVEDMERKKGS---------------------------------C 360
+ K +K+ ++E M++ S
Sbjct: 334 LDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERI 393
Query: 361 MPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRK 417
P+ VT L+ + +++ GVL +E + L +N ++ Y + + ++
Sbjct: 394 FPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKG 453
Query: 418 TWDEMERNGCGPDRRSYTIMIHGHYENG 445
+ ME+ G PD+ +Y M+ + +G
Sbjct: 454 VLELMEKKGFKPDKITYRTMVKAYRISG 481
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKV 346
N D N II LC + EA +F ++ G +P+V TYN +I+ + R EK+
Sbjct: 9 NMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGRAEKL 67
Query: 347 YELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLY 406
Y +M R+ +P+ +TY+ +++ L ++ R CS +N ++ Y
Sbjct: 68 YA---EMIRR--GLVPDTITYNSMIHGLCKQNKLAQA--RKVSKSCS----TFNTLINGY 116
Query: 407 MKWDN-QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAE 465
K +DG+ + EM R G + +YT +IHG + G A+ F+EM S G+ +
Sbjct: 117 CKATRVKDGM-NLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSS 175
Query: 466 PRT 468
T
Sbjct: 176 SIT 178
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 22/184 (11%)
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
RE + D +N+I++G C G EA ++ +++ S +PD+ TY I
Sbjct: 6 RESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAE 65
Query: 272 XXXXXXF-RGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
RG+ PD + N +I LC + ++ +A +V + C +T+
Sbjct: 66 KLYAEMIRRGLV-------PDTITYNSMIHGLCKQNKLAQARKV-----SKSC----STF 109
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVL---ERM 387
N+LI CK R++ L +M R+ + N +TY+ L++ + + L + M
Sbjct: 110 NTLINGYCKATRVKDGMNLFCEMYRR--GIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 388 ERNG 391
NG
Sbjct: 168 VSNG 171
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Query: 296 NCIIDALCFKKRVPEALEVFQDM-KERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDME 354
N ++ A K EA V+ +M K G EP++ TYN +IK C+ Y +V +ME
Sbjct: 155 NALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEME 214
Query: 355 RKKGSCMPNAVTYSCLLNSLKG---PEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDN 411
RK PN+ ++ +++ +EV VL M+ G ++ YN+ ++ K
Sbjct: 215 RK--GIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKK 272
Query: 412 QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
+ D M G P+ +Y+ +IHG ++A + F+ M ++G
Sbjct: 273 SKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRG 322
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 115/271 (42%), Gaps = 9/271 (3%)
Query: 106 KADSYAPTSRV----CNEILDILGKMSRFEELHQVFDE-MSHREGLVNEDTFSTLLRRFA 160
+A S P R+ + ++ L + F + + D + +R L +E + + +A
Sbjct: 68 RAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYA 127
Query: 161 AAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDI 220
A+ ++ ++ +F E+F + + + LL K ++A+ ++ + + + D+
Sbjct: 128 QANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDL 187
Query: 221 KTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRG 280
+T+N ++ +C G+A + + ++ +P+ ++ I
Sbjct: 188 ETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAM 247
Query: 281 MWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKI 340
M + G N V N I +LC +K+ EA + M G +PN TY+ LI C
Sbjct: 248 MKDRGVNI--GVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNE 305
Query: 341 RRMEKVYELVEDMERKKGSCMPNAVTYSCLL 371
E+ +L + M + C P++ Y L+
Sbjct: 306 DDFEEAKKLFKIMVNR--GCKPDSECYFTLI 334
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 101/229 (44%), Gaps = 6/229 (2%)
Query: 130 FEELHQVFDEMSHREGLVNE-DTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFR 188
++E +V+ EM G+ + +T++ +++ F + + S+ E+ G+ + +F
Sbjct: 167 YKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFG 226
Query: 189 TLLM-WLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIM 247
++ + K E + L K R + + T+N+ + C + EAK + ++
Sbjct: 227 LMISGFYAEDKSDEVGKVLAMMKDRGVNI--GVSTYNIRIQSLCKRKKSKEAKALLDGML 284
Query: 248 ASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKR 307
++ +P+ TY+ I F+ M N GC KPD +I LC
Sbjct: 285 SAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGC--KPDSECYFTLIYYLCKGGD 342
Query: 308 VPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
AL + ++ E+ P+ + SL+ L K ++E+ EL+ ++ K
Sbjct: 343 FETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 126/321 (39%), Gaps = 30/321 (9%)
Query: 125 GKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDL 184
K + + + +VF +MS+ N TF L+ A A +V +A + + D
Sbjct: 513 AKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDR 572
Query: 185 DAFRTLLMWLCRYKHVEDA-ETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVW 243
F L+ + V+ A + L KA + D + ++ C G AK V+
Sbjct: 573 VVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVY 632
Query: 244 KDIMASKCR--PDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGC---------NCKPDV 292
+ I R P+++T A G W+ C + PD
Sbjct: 633 QMIHKYGIRGTPEVYTIAV-------------NSCSKSGDWDFACSIYKDMKEKDVTPDE 679
Query: 293 VICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVED 352
V + +ID K + EA + QD K +G +Y+SL+ C + +K EL E
Sbjct: 680 VFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEK 739
Query: 353 MERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERN---GCSLSDDIYNLVLRLYMKW 409
++ K P T + L+ +L ++P +E ++ G + Y++++ +
Sbjct: 740 IKSIK--LRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERK 797
Query: 410 DNQDGLRKTWDEMERNGCGPD 430
D+ + K + + +G P+
Sbjct: 798 DDFEVSFKLLSQAKGDGVSPN 818
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/315 (17%), Positives = 121/315 (38%), Gaps = 6/315 (1%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
TF+ L+ A++ +E A + ++ G+ D + TL+ + V+ +FH
Sbjct: 469 TFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQM 528
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXX 270
+ + ++ T+ +++G G +A + + + +PD + I
Sbjct: 529 SNS-GVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGA 587
Query: 271 XXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATY 330
M E PD + ++ A C +V A EV+Q + + G Y
Sbjct: 588 VDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVY 647
Query: 331 NSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLN---SLKGPEEVPGVLERM 387
+ K + + +DM+ K P+ V +S L++ K +E G+L+
Sbjct: 648 TIAVNSCSKSGDWDFACSIYKDMKEK--DVTPDEVFFSALIDVAGHAKMLDEAFGILQDA 705
Query: 388 ERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKM 447
+ G L Y+ ++ + + +++++ P + +I E ++
Sbjct: 706 KSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQL 765
Query: 448 KDAMRYFREMTSKGM 462
AM Y E+ + G+
Sbjct: 766 PKAMEYLDEIKTLGL 780
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 140/370 (37%), Gaps = 71/370 (19%)
Query: 93 DWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTF 152
+W+ FFNW K+ S P + ++ K RF Q+ +EM
Sbjct: 165 EWQKTHTFFNWV-KSKSLFPMETI---FYNVTMKSLRFGRQFQLIEEM------------ 208
Query: 153 STLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAR 212
A+ M + G++LD + T++ R A F +
Sbjct: 209 ---------------ALEMV----KDGVELDNITYSTIITCAKRCNLYNKAIEWFE-RMY 248
Query: 213 EFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXX 272
+ L D T++ IL+ + G E +++ +A+ +PD ++
Sbjct: 249 KTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYD 308
Query: 273 XXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNS 332
+ M + + KP+VV+ N +++A+ + A +F +M E G PN T +
Sbjct: 309 GIRYVLQEM--KSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTA 366
Query: 333 LIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGC 392
L+K K R +L E+M+ KK + + Y+ LLN G+ E ER
Sbjct: 367 LVKIYGKARWARDALQLWEEMKAKKWPM--DFILYNTLLNMCAD----IGLEEEAER--- 417
Query: 393 SLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMR 452
++N D E C PD SYT M++ + GK + AM
Sbjct: 418 -----LFN-------------------DMKESVQCRPDNFSYTAMLNIYGSGGKAEKAME 453
Query: 453 YFREMTSKGM 462
F EM G+
Sbjct: 454 LFEEMLKAGV 463
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 5/181 (2%)
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
+ + N + +L F ++ E+ +M + G E + TY+++I + K E
Sbjct: 185 ETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWF 244
Query: 351 EDMERKKGSCMPNAVTYSCLLN--SLKGP-EEVPGVLERMERNGCSLSDDIYNLVLRLYM 407
E M K MP+ VTYS +L+ S G EEV + ER G ++++ +++
Sbjct: 245 ERM--YKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFG 302
Query: 408 KWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPR 467
+ + DG+R EM+ P+ Y ++ GK A F EM G+ +
Sbjct: 303 EAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEK 362
Query: 468 T 468
T
Sbjct: 363 T 363
>AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein |
chr5:3374443-3377332 REVERSE LENGTH=580
Length = 580
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKE-RGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
+ ++ N +++A + AL +F +M E G + +Y +++K L K RR+++ +++
Sbjct: 76 NTIVMNSVLEACVHCGNIDLALRMFHEMAEPGGIGVDSISYATILKGLGKARRIDEAFQM 135
Query: 350 VEDMERKKGSCMP---NAVTYSCLLNSLKGPEEV---PGVLERME---RNGCSLSDDIYN 400
+E +E + P +++ Y LL++L ++ G+L R + + + S IYN
Sbjct: 136 LETIEYGTAAGTPKLSSSLIYG-LLDALINAGDLRRANGLLARYDILLLDHGTPSVLIYN 194
Query: 401 LVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
L+++ Y+ ++ DEM R PDR +Y +IH + G + AM++F +M K
Sbjct: 195 LLMKGYVNSESPQAAINLLDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMKEK 254
Query: 461 G 461
Sbjct: 255 A 255
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 142/346 (41%), Gaps = 50/346 (14%)
Query: 115 RVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYT 174
RV N IL + K + + F M R+ + ++++L + K EEA+ +
Sbjct: 217 RVSNSILAVYAKCGELDFATKFFRRMRERDVI----AWNSVLLAYCQNGKHEEAVELVKE 272
Query: 175 REQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLG 234
E+ G+ L + L+ + + A L K F + D+ TW +++G G
Sbjct: 273 MEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQ-KMETFGITADVFTWTAMISGLIHNG 331
Query: 235 NAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVI 294
++A +++ + + P+ T + + G DV++
Sbjct: 332 MRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF--IDDVLV 389
Query: 295 CNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDME 354
N ++D ++ +A +VF +K + +V T+NS+I C+ K YEL M+
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 355 RKKGSCMPNAVTYSCLLNSL--KGPE-EVPGVLERMERNGCSLSDDIYNLVLRLYMKWDN 411
+ PN +T++ +++ G E E + +RME++G
Sbjct: 446 --DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG-------------------- 483
Query: 412 QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
+++RN ++ ++I G+ +NGK +A+ FR+M
Sbjct: 484 ---------KVQRN-----TATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 148/389 (38%), Gaps = 40/389 (10%)
Query: 96 PALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV-NEDTFST 154
P LV W Y + C+ +D++ KM F VF + GL+ N +
Sbjct: 280 PGLV--TWNILIGGYNQLGK-CDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQA 336
Query: 155 L--LRRFAAAHKVEEAISMFYTRE-------------------QFGLDLDLDAFRTLLMW 193
L R+ A V A+++ + G D+ +L+
Sbjct: 337 LDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDM 396
Query: 194 LCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRP 253
+ +EDA +F S ++D+ TWN ++ G+C G +A ++ + + RP
Sbjct: 397 YSKCGKLEDARKVFDSVK-----NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRP 451
Query: 254 DLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALE 313
++ T+ T I F+ M +G + + N II + EALE
Sbjct: 452 NIITWNTMISGYIKNGDEGEAMDLFQRMEKDG-KVQRNTATWNLIIAGYIQNGKKDEALE 510
Query: 314 VFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS 373
+F+ M+ PN T SL+ + + V E+ + R+ N + N+
Sbjct: 511 LFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRR------NLDAIHAVKNA 564
Query: 374 LKGPEEVPGVLE--RMERNGCSLSDDI-YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPD 430
L G +E R G D I +N ++ Y+ + +++M+ G P+
Sbjct: 565 LTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPN 624
Query: 431 RRSYTIMIHGHYENGKMKDAMRYFREMTS 459
R + + +I H G + + + F + +
Sbjct: 625 RGTLSSIILAHGLMGNVDEGKKVFYSIAN 653
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 162/394 (41%), Gaps = 57/394 (14%)
Query: 114 SRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFY 173
S + IL K+ + + + V H +N+ +FS+L+ + V++ + +
Sbjct: 453 SSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLL- 511
Query: 174 TREQFGLDLDLDA-FRTLLMWLCRYK-HVEDAETLFHSKAR---EFQLHRDIKTWNVILN 228
RE+ D ++ LL+ C+ + DA +++ K E LH + +++
Sbjct: 512 -REKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLH----ITSTMID 566
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
+ V+G EA++++ ++ +S D ++ + M +E +
Sbjct: 567 IYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIM-DEQKDI 625
Query: 289 KPDVVI-----------------------------------CNCIIDALCFKKRVP--EA 311
PDV + NC+I+ C + +P E
Sbjct: 626 VPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVIN--CCARALPLDEL 683
Query: 312 LEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLL 371
F++M G PN T+N L+ K + +KV EL + ++ G + + ++Y+ ++
Sbjct: 684 SGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFL-LAKRHG--VVDVISYNTII 740
Query: 372 NSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCG 428
+ K + ++ M+ +G S+S + YN +L Y K + R M+++ G
Sbjct: 741 AAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSG 800
Query: 429 PDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
PD +Y IMI+ + E G + + +E+ G+
Sbjct: 801 PDHYTYNIMINIYGEQGWIDEVADVLKELKESGL 834
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 149/352 (42%), Gaps = 12/352 (3%)
Query: 116 VCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMF-YT 174
+ + ++DI M F E +++ + +++ FS ++R + A +EEA S+
Sbjct: 560 ITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIM 619
Query: 175 REQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLG 234
EQ + D+ FR +L + + ++D + + R+ +H + + +N ++N
Sbjct: 620 DEQKDIVPDVYLFRDMLR-IYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARAL 678
Query: 235 NAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVI 294
E +++++ P+ T+ + F G DV+
Sbjct: 679 PLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV---VDVIS 735
Query: 295 CNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDME 354
N II A K ++M+ G ++ YN+L+ K ++MEK +++ M
Sbjct: 736 YNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRM- 794
Query: 355 RKKGSCMPNAVTYSCLLNSLKGPE----EVPGVLERMERNGCSLSDDIYNLVLRLYMKWD 410
KK + P+ TY+ ++N + G + EV VL+ ++ +G YN +++ Y
Sbjct: 795 -KKSTSGPDHYTYNIMIN-IYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGG 852
Query: 411 NQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGM 462
+ EM PD+ +YT ++ N + +A+++ M G+
Sbjct: 853 MVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 5/194 (2%)
Query: 286 CNCKPDVVICNCIIDALCFKKRVPEALEVFQD-MKERGCEPNVATYNSLIKHLCKIRRME 344
N +P V CN II A+ KR E++ +FQ K+ PNV +YN +I C ++
Sbjct: 174 SNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVD 233
Query: 345 KVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEV---PGVLERMERNGCSLSDDIYNL 401
+ E+ + P++VTY L L + +L M G + +YN
Sbjct: 234 EALEVYRHI-LANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNN 292
Query: 402 VLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
++R Y+ + D + +DE++ D + +E G K+AM +R + K
Sbjct: 293 LIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKK 352
Query: 462 MVAEPRTEKLVISM 475
P T +++ +
Sbjct: 353 FRMHPPTGNVLLEV 366
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 159/394 (40%), Gaps = 59/394 (14%)
Query: 112 PTSRVC--NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAI 169
P VC N +L + ++ VFD M + N+ +++ LL + K+EEA
Sbjct: 153 PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEAC 208
Query: 170 SMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
+F +RE + L ++ LL + K + +A F S RD+ +WN I+ G
Sbjct: 209 MLFKSRENWALV----SWNCLLGGFVKKKKIVEARQFFDSMNV-----RDVVSWNTIITG 259
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGM-------W 282
+ G EA++++ + D+FT+ + F M W
Sbjct: 260 YAQSGKIDEARQLFDESPVQ----DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSW 315
Query: 283 N------------EGCNCKPDVVIC------NCIIDALCFKKRVPEALEVFQDMKERGCE 324
N E DV+ C N +I ++ EA +F M +R +
Sbjct: 316 NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR--D 373
Query: 325 PNVATYNSLIKHLCKIRRMEKVYELVEDMERKKG----SCMPNAVTYSCLLNSLKGPEEV 380
P ++ ++I + + L MER+ G S +A++ + +L+ +++
Sbjct: 374 P--VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQL 431
Query: 381 PGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHG 440
G R+ + G + N +L +Y K + + + EM G D S+ MI G
Sbjct: 432 HG---RLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM----AGKDIVSWNTMIAG 484
Query: 441 HYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+ +G + A+R+F M +G+ + T V+S
Sbjct: 485 YSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 143/352 (40%), Gaps = 12/352 (3%)
Query: 125 GKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDL 184
G +S+ E + + + R + E+T +TL+ + HK++EA ++ +
Sbjct: 649 GDVSKAEMIADIIIRLGLR---MEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTP-GK 704
Query: 185 DAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWK 244
R+++ R +EDA LF A E T ++++N G EA+ + +
Sbjct: 705 SVIRSMIDAYVRCGWLEDAYGLFMESA-EKGCDPGAVTISILVNALTNRGKHREAEHISR 763
Query: 245 DIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCF 304
+ D Y T I + M G C + N +I
Sbjct: 764 TCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPC--SIQTYNTMISVYGR 821
Query: 305 KKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK---GSCM 361
++ +A+E+F + + G + Y ++I H K +M + L +M++K G+
Sbjct: 822 GLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPS 881
Query: 362 PNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDE 421
N + C + L EV +L+ MERNG Y ++++Y + KT
Sbjct: 882 YNMMVKICATSRLH--HEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITL 939
Query: 422 MERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVI 473
++ G ++ ++ + G M++A R + +M+ G+ + ++ ++
Sbjct: 940 VKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTIL 991
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 125/325 (38%), Gaps = 46/325 (14%)
Query: 139 EMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYK 198
++S+R +V ++ +LR + K++ A F + G + D A T+L R+
Sbjct: 181 QLSYRPSVV---VYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWG 237
Query: 199 HVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTY 258
A F+ +E ++ +N +L+ + +W +++ P+ FTY
Sbjct: 238 R-HSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTY 296
Query: 259 ATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDM 318
+ FK+ EAL+ F +M
Sbjct: 297 TLVVSSYAKQG----------------------------------FKE---EALKAFGEM 319
Query: 319 KERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPE 378
K G P TY+S+I K EK L EDM R +G +P+ T + +L+ E
Sbjct: 320 KSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDM-RSQG-IVPSNYTCATMLSLYYKTE 377
Query: 379 EVPGVLE---RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYT 435
P L MERN + I L++R+Y K + ++E ER D ++Y
Sbjct: 378 NYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYL 437
Query: 436 IMIHGHYENGKMKDAMRYFREMTSK 460
M H +G + A+ M ++
Sbjct: 438 AMSQVHLNSGNVVKALDVIEMMKTR 462
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 34/188 (18%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
+P VV+ ++ ++ A E F +M E GCEP+ ++ LC R +
Sbjct: 185 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTM---LCTYARWGR--- 238
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMK 408
+S +L K +E LS +YN +L K
Sbjct: 239 ------------------HSAMLTFYKAVQE----------RRILLSTSVYNFMLSSLQK 270
Query: 409 WDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRT 468
+ W EM G P+ +YT+++ + + G ++A++ F EM S G V E T
Sbjct: 271 KSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVT 330
Query: 469 EKLVISMN 476
VIS++
Sbjct: 331 YSSVISLS 338
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 102/252 (40%), Gaps = 7/252 (2%)
Query: 220 IKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFR 279
+ + ++L + +G A+ + +++ C PD T + ++
Sbjct: 188 VVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYK 247
Query: 280 GMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCK 339
+ V N ++ +L K + ++++ +M E G PN TY ++ K
Sbjct: 248 AVQERRILLSTSVY--NFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 340 IRRMEKVYELVEDMERKKGSCMPNAVTYSCLLN-SLKGP--EEVPGVLERMERNGCSLSD 396
E+ + +M K +P VTYS +++ S+K E+ G+ E M G S+
Sbjct: 306 QGFKEEALKAFGEM--KSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSN 363
Query: 397 DIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFRE 456
+L LY K +N + +MERN D ++I + + G DA F E
Sbjct: 364 YTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEE 423
Query: 457 MTSKGMVAEPRT 468
++A+ +T
Sbjct: 424 TERLNLLADEKT 435
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/421 (19%), Positives = 161/421 (38%), Gaps = 52/421 (12%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
+ + W+ FF+W SY P+ V +L + G++ + + + F EM +
Sbjct: 163 KEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPD 222
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
T+L +A + ++ + ++ + L + +L L + FH
Sbjct: 223 AVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKS--------FH 274
Query: 209 SKAREFQLHR-------DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATF 261
K + L + T+ ++++ + G EA + + ++ + P+ TY++
Sbjct: 275 GKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSV 334
Query: 262 IXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKER 321
I + M ++G P C ++ + P+AL +F DM+
Sbjct: 335 ISLSVKAGDWEKAIGLYEDMRSQG--IVPSNYTCATMLSLYYKTENYPKALSLFADMERN 392
Query: 322 GCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCL----LNSLKGP 377
+ +I+ K+ + E+ ER + + + TY + LNS
Sbjct: 393 KIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERL--NLLADEKTYLAMSQVHLNSGNVV 450
Query: 378 EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRS---- 433
+ + V+E M+ LS Y ++L+ Y K N D + + + + G PD S
Sbjct: 451 KALD-VIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDM 508
Query: 434 ---YT--------------IMI-HGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISM 475
YT IM+ H++ K AMR + +GMVAE + L++ M
Sbjct: 509 LNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVY---CKEGMVAE--AQDLIVKM 563
Query: 476 N 476
Sbjct: 564 G 564
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 41/227 (18%)
Query: 287 NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIR----- 341
+ K +V ICN I+ L ++ +++F MK G +P+V TYN+L+ K++
Sbjct: 161 STKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPK 220
Query: 342 -------------------------------RMEKVYELVEDMERKKGSCMPNAVTYSCL 370
R E+ ++ M+ + S PN YS L
Sbjct: 221 AIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHS--PNIYHYSSL 278
Query: 371 LNSL--KGP-EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGC 427
LNS KG ++ ++ M+ G + + +L++Y+K D R+ E+E G
Sbjct: 279 LNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGY 338
Query: 428 GPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+ Y +++ G + GK+++A F +M KG+ ++ ++IS
Sbjct: 339 AENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMIS 385
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 141/344 (40%), Gaps = 48/344 (13%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N IL G R+++L Q+F+ M + G ++ T+S+ ++ F A V +A+ ++ +
Sbjct: 102 NVILRDFGISGRWQDLIQLFEWM-QQHGKISVSTYSSCIK-FVGAKNVSKALEIYQSIPD 159
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
+++ ++L L + ++ LF R+ L D+ T+N +L G + N +
Sbjct: 160 ESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRD-GLKPDVVTYNTLLAGCIKVKNGY 218
Query: 238 -EAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICN 296
+A + ++ + + D Y T +
Sbjct: 219 PKAIELIGELPHNGIQMDSVMYGTVL---------------------------------- 244
Query: 297 CIIDALCFKK-RVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
A+C R EA Q MK G PN+ Y+SL+ +K EL+ +M
Sbjct: 245 ----AICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEM-- 298
Query: 356 KKGSCMPNAVTYSCLLNS-LKGP--EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQ 412
K +PN V + LL +KG + +L +E G + ++ Y +++ K
Sbjct: 299 KSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKL 358
Query: 413 DGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFRE 456
+ R +D+M+ G D + +IMI + + K+A R+
Sbjct: 359 EEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRD 402
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 128/301 (42%), Gaps = 17/301 (5%)
Query: 116 VCNEILDILGKMSRFEELHQVFDEMSHREGLVNED-TFSTLLRRFAAAHKVE----EAIS 170
+CN IL L K + + ++FD+M R+GL + T++TLL A KV+ +AI
Sbjct: 168 ICNSILSCLVKNGKLDSCIKLFDQMK-RDGLKPDVVTYNTLL---AGCIKVKNGYPKAIE 223
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ G+ +D + T+L E+AE E +I ++ +LN +
Sbjct: 224 LIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGH-SPNIYHYSSLLNSY 282
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
G+ +A + ++ + P+ T + + + G +
Sbjct: 283 SWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGY-AEN 341
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
++ C ++D L ++ EA +F DMK +G + + +I LC+ +R ++ EL
Sbjct: 342 EMPYC-MLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELS 400
Query: 351 EDMERKKGSC---MPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYM 407
D E C M N T C E V ++++M+ S + ++++++ ++
Sbjct: 401 RDSETTYEKCDLVMLN--TMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFI 458
Query: 408 K 408
K
Sbjct: 459 K 459
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 306 KRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAV 365
K V +ALE++Q + + + NV NS++ L K +++ +L + M+R P+ V
Sbjct: 145 KNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRD--GLKPDVV 202
Query: 366 TYSCLLNS-LKGPEEVPGVLE---RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDE 421
TY+ LL +K P +E + NG + +Y VL + + +
Sbjct: 203 TYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQ 262
Query: 422 MERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
M+ G P+ Y+ +++ + G K A EM S G+V
Sbjct: 263 MKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLV 304
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/441 (19%), Positives = 159/441 (36%), Gaps = 82/441 (18%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
AL FFNWA++ Y+ S + I L +F + +F ++ + L++ + +L+
Sbjct: 65 ALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLI 124
Query: 157 RRFAAAHK-------VEEAIS----------------------------MFYTREQFGLD 181
K +EEA S +F G+
Sbjct: 125 DTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVS 184
Query: 182 LDLDAFRTLLMWLCRYKHVEDAETLF-HSKAREFQLHRDIKTWNVILNGWCVLGNAHEAK 240
L+ F + W CR L K ++ I +IL+ C +A
Sbjct: 185 LNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIAL-LILHSLCKCSREMDAF 243
Query: 241 RVWKDIMASKCRPDLFTYATF---------------IXXXXXXXXXXXXXXXFRGMWNEG 285
+ +++ C+PD Y + +R +
Sbjct: 244 YILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDL 303
Query: 286 CNCK--------PDVVIC------NCIIDALCFKKRVPE---ALEVFQDMKERGCEPNVA 328
+ K +V++ N I+DAL + A+E M G P +
Sbjct: 304 ISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIR 363
Query: 329 TYNSLIKHLC---KIRRMEKVYELVED----MERKKGSCMPNAVTYSCLLNSLKGPEEVP 381
T + L K+LC K + K YEL+ E + S M +++ C ++ E
Sbjct: 364 TLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM---ISFLCKAGRVR---ESY 417
Query: 382 GVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGH 441
L+ M++ G + +YN ++ K + +K WDEM GC + +Y ++I
Sbjct: 418 TALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKL 477
Query: 442 YENGKMKDAMRYFREMTSKGM 462
E G+ ++++R F +M +G+
Sbjct: 478 SEEGEAEESLRLFDKMLERGI 498
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 104/246 (42%), Gaps = 24/246 (9%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAA---HKVEEAISMFYTRE 176
ILD++ R E +V + + + ++ D L+ +A VE + M T +
Sbjct: 300 ILDLISA-KRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGK 358
Query: 177 QFGLDLDLDAFRTLLMW---LCRYK---HVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
L A RTL LCR+ H+ A L SK ++++++++++
Sbjct: 359 -------LPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKG----YFSELQSYSLMISFL 407
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP 290
C G E+ +++ PD+ Y I + M+ EGC K
Sbjct: 408 CKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC--KM 465
Query: 291 DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELV 350
++ N +I L + E+L +F M ERG EP+ Y SLI+ LCK ++E E+
Sbjct: 466 NLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVF 525
Query: 351 ED-MER 355
MER
Sbjct: 526 RKCMER 531
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/378 (19%), Positives = 143/378 (37%), Gaps = 41/378 (10%)
Query: 116 VCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTR 175
VCN +L L ++ ++F +M H+ +N F + F + + + + +
Sbjct: 154 VCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEV 213
Query: 176 EQFGLDLDLDAFRTLLMW-LCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLG 234
++ L+++ L++ LC+ DA + + R D + VI + V G
Sbjct: 214 KKANLNINGSIIALLILHSLCKCSREMDAFYILE-ELRNIDCKPDFMAYRVIAEAFVVTG 272
Query: 235 NAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXX---------------FR 279
N +E + V K P Y FI
Sbjct: 273 NLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILD 332
Query: 280 GMWNEGCNCKPDVVI-----------------CNCIIDALCFKKRVPEALEVFQDMKERG 322
+ PD + + + LC + ++ ++ + +G
Sbjct: 333 ALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKG 392
Query: 323 CEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEV-- 380
+ +Y+ +I LCK R+ + Y +++M KK P+ Y+ L+ + E +
Sbjct: 393 YFSELQSYSLMISFLCKAGRVRESYTALQEM--KKEGLAPDVSLYNALIEACCKAEMIRP 450
Query: 381 -PGVLERMERNGCSLSDDIYNLVLR-LYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMI 438
+ + M GC ++ YN+++R L + + ++ LR +D+M G PD Y +I
Sbjct: 451 AKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLR-LFDKMLERGIEPDETIYMSLI 509
Query: 439 HGHYENGKMKDAMRYFRE 456
G + K++ AM FR+
Sbjct: 510 EGLCKETKIEAAMEVFRK 527
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 8/164 (4%)
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREF----QLHRDIKTWNVILNGWCVLGNAHEAKR 241
A+ +L L ++A LF + +E L ++ T+NV++NG+C G EA
Sbjct: 312 AYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAME 371
Query: 242 VWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDA 301
V++ + KC PD ++ + + M E N KPD ++D
Sbjct: 372 VFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEM--EEKNVKPDEYTYGLLMDT 429
Query: 302 LCFKK-RVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRME 344
CFK+ ++ E ++ M E PN+A YN L L K +++
Sbjct: 430 -CFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLD 472
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 113 TSRVCNEILDILGKMSRFEELHQVFDEMSH-----REGLVNEDTFSTLLRRFAAAHKVEE 167
++ N +L+ L + +F+E ++FD + R VN TF+ ++ + A K EE
Sbjct: 309 SAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEE 368
Query: 168 AISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVIL 227
A+ +F F D +F L+ LC + + +AE L+ + E + D T+ +++
Sbjct: 369 AMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLY-GEMEEKNVKPDEYTYGLLM 427
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPDLFTY 258
+ G E +K ++ S RP+L Y
Sbjct: 428 DTCFKEGKIDEGAAYYKTMVESNLRPNLAVY 458
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 12/214 (5%)
Query: 249 SKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRV 308
S CRP +FT T + G N+ P+++ N I A ++
Sbjct: 124 SNCRPTIFTVNT-VLAAQLRQAKYGALLQLHGFINQ-AGIAPNIITYNLIFQAYLDVRKP 181
Query: 309 PEALEVFQDMKERG-CEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTY 367
ALE ++ + P++AT+ L+K L +EK E+ EDM K P V Y
Sbjct: 182 EIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDP--VVY 239
Query: 368 SCLLNSLKGPEEVPGVL----ERMERNGCSLSDD-IYNLVLRLYMKWDNQDGLRKTWDEM 422
S L+ + GVL E E+ G + D +Y +++ Y + + + ++E
Sbjct: 240 SYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEA 299
Query: 423 --ERNGCGPDRRSYTIMIHGHYENGKMKDAMRYF 454
E + +Y ++ ENGK +A++ F
Sbjct: 300 VGENSKVRMSAMAYNYVLEALSENGKFDEALKLF 333
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/316 (18%), Positives = 126/316 (39%), Gaps = 12/316 (3%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS- 209
TF L++ + +E+A+ + G +D + L+M + + L+
Sbjct: 203 TFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQEL 262
Query: 210 KAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA--SKCRPDLFTYATFIXXXXX 267
K + D + ++ G+ + EA +++ + SK R Y +
Sbjct: 263 KEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSE 322
Query: 268 XXXXXXXXXXFRGMWNEGC---NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCE 324
F + E + ++ N +++ C + EA+EVF+ M + C
Sbjct: 323 NGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCS 382
Query: 325 PNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL--KGP-EEVP 381
P+ ++N+L+ LC + + +L +ME K + P+ TY L+++ +G +E
Sbjct: 383 PDTLSFNNLMNQLCDNELLAEAEKLYGEMEEK--NVKPDEYTYGLLMDTCFKEGKIDEGA 440
Query: 382 GVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGH 441
+ M + + +YN + +K D + +D M + D +Y ++
Sbjct: 441 AYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFD-MMVSKLKMDDEAYKFIMRAL 499
Query: 442 YENGKMKDAMRYFREM 457
E G++ + ++ EM
Sbjct: 500 SEAGRLDEMLKIVDEM 515
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 46/174 (26%)
Query: 222 TWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGM 281
T+N +++G+C +AKR+ D MASK
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRML-DSMASK------------------------------- 39
Query: 282 WNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIR 341
C PDVV + +I+ C KRV +E+F +M RG N TY +LI C++
Sbjct: 40 -----GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 94
Query: 342 RMEKVYELVEDMERKKGSC--MPNAVTYSCLLNSLKGPEEVP---GVLERMERN 390
++ +L+ +M SC P+ +T+ C+L L +E+ +LE ++++
Sbjct: 95 DLDAAQDLLNEMI----SCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 144
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Query: 325 PNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVL 384
P TYNS+I CK R++ +++ M K C P+ VT+S L+N + V +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASK--GCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 385 E---RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGH 441
E M R G + Y ++ + + + D + +EM G PD ++ M+ G
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 442 YENGKMKDAMRYFREM 457
+++ A ++
Sbjct: 126 CSKKELRKAFAILEDL 141
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 151/380 (39%), Gaps = 47/380 (12%)
Query: 131 EELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTL 190
EE + EM ++E T S L R + A +E++ S F R ++ + +
Sbjct: 419 EEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWF-KRFHVAGNMSSEGYSAN 477
Query: 191 LMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASK 250
+ ++ +AE +F +E R + +NV++ + + + +A +++ +M+
Sbjct: 478 IDAYGERGYLSEAERVFIC-CQEVN-KRTVIEYNVMIKAYGISKSCEKACELFESMMSYG 535
Query: 251 CRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEG--------C---------------- 286
PD TY T + M G C
Sbjct: 536 VTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAE 595
Query: 287 ---------NCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHL 337
N +PDVV+ +I+A V +A+ + MKE G N YNSLIK
Sbjct: 596 EVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLY 655
Query: 338 CKIRRM---EKVY-ELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEV---PGVLERMERN 390
K+ + E +Y +L++ + + P+ T +C++N V + + M++
Sbjct: 656 TKVGYLDEAEAIYRKLLQSCNKTQ---YPDVYTSNCMINLYSERSMVRKAEAIFDSMKQR 712
Query: 391 GCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDA 450
G ++ + ++L +Y K + + +M D SY ++ +G+ K+A
Sbjct: 713 G-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEA 771
Query: 451 MRYFREMTSKGMVAEPRTEK 470
+ F+EM S G+ + T K
Sbjct: 772 VETFKEMVSSGIQPDDSTFK 791
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 155/387 (40%), Gaps = 25/387 (6%)
Query: 88 RRHRSDWKPALVFFNWA---SKADSYA-PTSRVCNEILDILGKMSRFEELHQVFDEMSHR 143
++ R K F W+ +KADS+ +S N ++D GK + +E + F M
Sbjct: 268 KKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRM-LE 326
Query: 144 EGLV-NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVED 202
EG+V TF+T++ + ++ E S+ T + D + L+ + +E
Sbjct: 327 EGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIER 385
Query: 203 AETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFI 262
A F + ++ L D ++ +L + + EA+ + ++ D +T +
Sbjct: 386 AGAYFK-EMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALT 444
Query: 263 XXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVF---QDMK 319
F+ G N + N IDA + + EA VF Q++
Sbjct: 445 RMYVEAEMLEKSWSWFKRFHVAG-NMSSEGYSAN--IDAYGERGYLSEAERVFICCQEVN 501
Query: 320 ERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKG--- 376
+R V YN +IK + EK EL E M P+ TY+ L+ L
Sbjct: 502 KR----TVIEYNVMIKAYGISKSCEKACELFESMMSY--GVTPDKCTYNTLVQILASADM 555
Query: 377 PEEVPGVLERMERNGCSLSDDI-YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYT 435
P + LE+M G +SD I Y V+ ++K + + + EM PD Y
Sbjct: 556 PHKGRCYLEKMRETG-YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYG 614
Query: 436 IMIHGHYENGKMKDAMRYFREMTSKGM 462
++I+ + G ++ AM Y M G+
Sbjct: 615 VLINAFADTGNVQQAMSYVEAMKEAGI 641
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 137/367 (37%), Gaps = 45/367 (12%)
Query: 94 WKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
W+ A+ F W Y N +L ILGK ++ + ++DEM + T+
Sbjct: 167 WERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYG 226
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
TL+ ++ A+ + G+ D +L + KARE
Sbjct: 227 TLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQ--------------MYKKARE 272
Query: 214 FQLHRD-IKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXX 272
FQ + K W + E K ++S +TY T I
Sbjct: 273 FQKAEEFFKKW-----------SCDENKADSHVCLSS------YTYNTMIDTYGKSGQIK 315
Query: 273 XXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNS 332
F+ M EG P V N +I ++ E + + MK C P+ TYN
Sbjct: 316 EASETFKRMLEEG--IVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNI 372
Query: 333 LIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLK---GPEEVPGVLERMER 389
LI K +E+ ++M K P+ V+Y LL + EE G++ M+
Sbjct: 373 LISLHTKNNDIERAGAYFKEM--KDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDD 430
Query: 390 NGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRS--YTIMIHGHYENGKM 447
+ + + + + R+Y++ + L K+W +R + S Y+ I + E G +
Sbjct: 431 DNVEIDEYTQSALTRMYVE---AEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYL 487
Query: 448 KDAMRYF 454
+A R F
Sbjct: 488 SEAERVF 494
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 13/226 (5%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAH--KVEEAISMFYTR 175
N I+ L + S FEE +VF M +EG VN D + + A H ++ A ++Y
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEG-VNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 176 EQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGN 235
E+ G+ LD+ TL+ R E A ++F+S +RD+ W + + GN
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT-----NRDVSAWTAAIGAMAMAGN 551
Query: 236 AHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVIC 295
A A ++ D++ +PD + + F M P+ V
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH-GVSPEDVHY 610
Query: 296 NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIR 341
C++D L + EA+++ +DM EPN +NSL+ C+++
Sbjct: 611 GCMVDLLGRAGLLEEAVQLIEDMP---MEPNDVIWNSLLAA-CRVQ 652
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 13/226 (5%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAH--KVEEAISMFYTR 175
N I+ L + S FEE +VF M +EG VN D + + A H ++ A ++Y
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEG-VNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 176 EQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGN 235
E+ G+ LD+ TL+ R E A ++F+S +RD+ W + + GN
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT-----NRDVSAWTAAIGAMAMAGN 551
Query: 236 AHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVIC 295
A A ++ D++ +PD + + F M P+ V
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH-GVSPEDVHY 610
Query: 296 NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIR 341
C++D L + EA+++ +DM EPN +NSL+ C+++
Sbjct: 611 GCMVDLLGRAGLLEEAVQLIEDMP---MEPNDVIWNSLLAA-CRVQ 652
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 114/280 (40%), Gaps = 9/280 (3%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGL-VNEDTFSTLLRRFAAAHKVEEAI 169
P++ N +L +L + + EL + R G+ + E TF L+ +V+ A
Sbjct: 140 VPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCAT 199
Query: 170 SMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETL-FHSKAREFQLHRDIKTWNVILN 228
+ Q + +D + LL +C++K + + + R+ + ++ + V++
Sbjct: 200 ELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMR 259
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNC 288
G E V + + PDL Y + F +
Sbjct: 260 FLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLL--GL 317
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
PDV N I+ LC + + AL++ M + G EPNV TYN LIK L K + +
Sbjct: 318 APDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKT 377
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVP---GVLE 385
L ++ME N+ T+ ++++ +EV G+LE
Sbjct: 378 LWKEME--TNGVNRNSHTFDIMISAYIEVDEVVCAHGLLE 415
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
+PDVV+ N +++A +K+ A V Q +K+RG +P+ TY +++ + + V+E
Sbjct: 590 EPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHE 649
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVLR- 404
M++ S +PNA+ Y L+N+L +E +E ME G S +Y + R
Sbjct: 650 FFRKMQK---SSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARC 706
Query: 405 LYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
L +GL ++ R P +YT +I ++G +K+A F +M
Sbjct: 707 LCSAGRCNEGL-NMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQM 758
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 296 NCIIDALCFKKRVPEALEVFQDM-KERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDME 354
N ++ A K EA V+ +M K G EP++ TYN +I+ LC+ Y +V +ME
Sbjct: 150 NALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEME 209
Query: 355 RKKGSCMPNAVTYSCLLNSLKGPE---EVPGVLERMERNGCSLSDDIYNLVLRLYMKWDN 411
RK P A ++ +++ E EV V+ M+ G + YN++++ K
Sbjct: 210 RK--WIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKK 267
Query: 412 QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
+ D + P+ +Y+++IHG + +AM F M G
Sbjct: 268 SAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNG 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 99/254 (38%), Gaps = 41/254 (16%)
Query: 213 EFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDI-MASKCRPDLFTYATFIXXXXXXXXX 271
++++ R +K+ N +L + + EA RV+ ++ PDL TY I
Sbjct: 139 QYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGST 198
Query: 272 XXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYN 331
M E KP +ID +++ E +V + M E G VATYN
Sbjct: 199 SSSYSIVAEM--ERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYN 256
Query: 332 SLIKHLCKIRRMEKVYELVEDMERKKGSC--MPNAVTYSCLLNSLKGPEEVPGVLERMER 389
+I+ LCK ++ + L++ + SC PN+VTYS L++ E +
Sbjct: 257 IMIQCLCKRKKSAEAKALIDGV----MSCRMRPNSVTYSLLIHGFCSEENL--------- 303
Query: 390 NGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKD 449
D+ NL ++ M NG PD Y +IH + G +
Sbjct: 304 ------DEAMNL-----------------FEVMVCNGYKPDSECYFTLIHCLCKGGDFET 340
Query: 450 AMRYFREMTSKGMV 463
A+ RE K V
Sbjct: 341 ALILCRESMEKNWV 354
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 156/371 (42%), Gaps = 33/371 (8%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNED--TFSTLLRRFAAAHKVEEAISMFYTR 175
N I+ K F E + + ++ RE V+ D TF ++++ A E ++
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKL--RESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 176 EQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGN 235
G + DL L+ R + A +F RD+ +WN +++G+ G
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV-----RDLVSWNSLISGYSSHGY 187
Query: 236 AHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCK---PDV 292
EA ++ ++ S PD FT ++ + +G G K V
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK------QGQGLHGFALKSGVNSV 241
Query: 293 VICNCIIDALCFKKRVP-EALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
V+ N + A+ K R P +A VF +M R + +YN++I C ++E V E V
Sbjct: 242 VVVNNGLVAMYLKFRRPTDARRVFDEMDVR----DSVSYNTMI---CGYLKLEMVEESVR 294
Query: 352 DMERKKGSCMPNAVTYSCLLNS---LKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMK 408
P+ +T S +L + L+ + M + G L + N+++ +Y K
Sbjct: 295 MFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAK 354
Query: 409 WDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRT 468
+ R ++ ME C D S+ +I G+ ++G + +AM+ F+ M A+ T
Sbjct: 355 CGDMITARDVFNSME---C-KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 469 EKLVISMNSPL 479
++IS+++ L
Sbjct: 411 YLMLISVSTRL 421
>AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891360
REVERSE LENGTH=849
Length = 849
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 164/381 (43%), Gaps = 19/381 (4%)
Query: 101 FNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFA 160
+ W ++ + Y + ++ + LGK +F + +VFD++ ++ + +E TF L+ +
Sbjct: 225 YRWMTQQNWYRFDFGLTTKLAEYLGKERKFTKCREVFDDVLNQGRVPSESTFHILVVAYL 284
Query: 161 AAHKVE----EAISMFYTREQFG-----LDLDLDAFRTLL--MWLCRYKHVEDAETLFHS 209
++ VE EA S++ Q G L L FR L+ ++ AE +FH+
Sbjct: 285 SSLSVEGCLEEACSVYNRMIQLGGYKPRLSLHNSLFRALVSKQGGILNDQLKQAEFIFHN 344
Query: 210 KARE-FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXX 268
++ +DI + + L+ + + +++ + + + +
Sbjct: 345 VVTTGLEVQKDIYSGLIWLHSCQDEVDIGRINSLREEMKKAGFQESKEVVVSLLRAYAKE 404
Query: 269 XXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVA 328
+ + + C + I+A +A+E+F++M++ ++
Sbjct: 405 GGVEEVERTWLELLDLDCGIPSQAFVYK--IEAYSKVGDFAKAMEIFREMEKHIGGATMS 462
Query: 329 TYNSLIKHLCKIRRMEKVYELVEDMERK-KGSCMPNAVTYSCLLNSLKGPEEVP-GVLER 386
Y+ +I+ LCK++++E V L+++ E K +P+ + + + L E++ ++
Sbjct: 463 GYHKIIEVLCKVQQVELVETLMKEFEESGKKPLLPSFIEIAKMYFDLGLHEKLEMAFVQC 522
Query: 387 MERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGC-GPDRRSYTIMIHGHYENG 445
+E+ C S IYN+ L K N + ++EM+ NG RS ++ G+ + G
Sbjct: 523 LEK--CQPSQPIYNIYLDSLTKIGNLEKAGDVFNEMKNNGTINVSARSCNSLLKGYLDCG 580
Query: 446 KMKDAMRYFREMTSKGMVAEP 466
K A R + M K EP
Sbjct: 581 KQVQAERIYDLMRMKKYEIEP 601
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 90/184 (48%), Gaps = 17/184 (9%)
Query: 298 IIDALCFKKRVPEALEVFQDM-KERGCEPNVATYN---------SLIKHLCKI--RRMEK 345
++ L F +R EAL++F M +R P++A Y+ L+K L K+ R +K
Sbjct: 261 LLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQK 320
Query: 346 VYELVEDMERKKGSCM--PNAVTYSCLLNSLKGP---EEVPGVLERMERNGCSLSDDIYN 400
+L +++ +K + P+ V Y+ +LN+ + V V + +NG + Y
Sbjct: 321 PTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYG 380
Query: 401 LVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
L + + ++ D + + +M+ +G P +Y +++ + GK+++A+ R+M K
Sbjct: 381 LAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQK 440
Query: 461 GMVA 464
G++
Sbjct: 441 GVIG 444
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/393 (19%), Positives = 152/393 (38%), Gaps = 57/393 (14%)
Query: 116 VCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTR 175
V N I+D+ K E +VFD++S R+G ++ ++ + EEA +F
Sbjct: 138 VRNVIMDMYVKHESVESARKVFDQISQRKG----SDWNVMISGYWKWGNKEEACKLFDMM 193
Query: 176 EQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGN 235
+ D+ ++ ++ + K +E+A F + + +WN +L+G+ G
Sbjct: 194 PEN----DVVSWTVMITGFAKVKDLENARKYFDRMP-----EKSVVSWNAMLSGYAQNGF 244
Query: 236 AHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXF----------------- 278
+A R++ D++ RP+ T+ I
Sbjct: 245 TEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTA 304
Query: 279 --------------RGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCE 324
R ++NE + ++V N +I + A ++F M +R
Sbjct: 305 LLDMHAKCRDIQSARRIFNE-LGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR--- 360
Query: 325 PNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS---LKGPEEVP 381
NV ++NSLI + E EDM G P+ VT +L++ + E
Sbjct: 361 -NVVSWNSLIAGYAHNGQAALAIEFFEDMI-DYGDSKPDEVTMISVLSACGHMADLELGD 418
Query: 382 GVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGH 441
+++ + +N L+D Y ++ +Y + N ++ +DEM+ D SY +
Sbjct: 419 CIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAF 474
Query: 442 YENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
NG + + +M +G+ + T V++
Sbjct: 475 AANGDGVETLNLLSKMKDEGIEPDRVTYTSVLT 507
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 120/273 (43%), Gaps = 18/273 (6%)
Query: 116 VCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTR 175
V N ILD+ + E F EM ++ L+ +T + L R ++ EA+ MF
Sbjct: 250 VMNSILDLYCRCGYLSEAKHYFHEMEDKD-LITWNTLISELERSDSS----EALLMFQRF 304
Query: 176 EQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGN 235
E G + F +L+ + + L H + +++++ N +++ + GN
Sbjct: 305 ESQGFVPNCYTFTSLVAACANIAALNCGQQL-HGRIFRRGFNKNVELANALIDMYAKCGN 363
Query: 236 AHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVIC 295
+++RV+ +I+ R +L ++ + + F M + G +PD ++
Sbjct: 364 IPDSQRVFGEIVD---RRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGI--RPDRIVF 418
Query: 296 NCIIDALCFKKRVPEALEVFQDMK-ERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDME 354
++ A V + L+ F M+ E G P+ YN ++ L + ++ + YELVE M
Sbjct: 419 MAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMP 478
Query: 355 RKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERM 387
K P+ T+ +L + K + G++ R+
Sbjct: 479 FK-----PDESTWGAILGACKAHKH-NGLISRL 505
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 115/252 (45%), Gaps = 33/252 (13%)
Query: 218 RDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXX 277
+++ +W +++ + G++ EA V+ ++M S +P+ FT+AT +
Sbjct: 116 KNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFAT-VLTSCIRASGLGLGKQ 174
Query: 278 FRGM---WNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLI 334
G+ WN + + + + ++D ++ EA E+F+ + ER +V + ++I
Sbjct: 175 IHGLIVKWNYDSH----IFVGSSLLDMYAKAGQIKEAREIFECLPER----DVVSCTAII 226
Query: 335 KHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSL 394
++ E+ E+ + + S PN VTY+ LL +L G +L+ ++ C +
Sbjct: 227 AGYAQLGLDEEALEMFHRLHSEGMS--PNYVTYASLLTALSG----LALLDHGKQAHCHV 280
Query: 395 -------SDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRR--SYTIMIHGHYENG 445
+ N ++ +Y K N R+ +D M P+R S+ M+ G+ ++G
Sbjct: 281 LRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNM------PERTAISWNAMLVGYSKHG 334
Query: 446 KMKDAMRYFREM 457
++ + FR M
Sbjct: 335 LGREVLELFRLM 346
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 289 KPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 348
+PDVV+ N +++A +K+ A V Q +K+RG +P+ TY +++ + + V+E
Sbjct: 590 EPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHE 649
Query: 349 LVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIY 399
M++ S +PNA+ Y L+N+L +E +E ME G S +Y
Sbjct: 650 FFRKMQK---SSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALY 700
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 81/169 (47%), Gaps = 33/169 (19%)
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
+++ N II A +++ + L + ++MKE C+P+V TYNS++ L + + ++ ++
Sbjct: 177 LIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLS 236
Query: 352 DMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDN 411
M ++ S N +TY+ +LN + R C +++ L +Y
Sbjct: 237 TM-KEDCSVSVNIITYNTVLNGM--------------RKACR-----FDMCLVIY----- 271
Query: 412 QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSK 460
+EM + G PD SYT +I +G +K+++R F EM +
Sbjct: 272 --------NEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQR 312
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 21/251 (8%)
Query: 218 RDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXX 277
+D+ ++N I+ G+ G +A R+ +++ + +PD FT ++ +
Sbjct: 205 KDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEI 264
Query: 278 FRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHL 337
+ +G + DV I + ++D R+ ++ VF + C + ++NSL+
Sbjct: 265 HGYVIRKGID--SDVYIGSSLVDMYAKSARIEDSERVFSRLY---CRDGI-SWNSLVAGY 318
Query: 338 CKIRRMEKVYELVEDMERKKGSCMPNAVTYSCL------LNSLKGPEEVPGVLERMERNG 391
+ R + L M K P AV +S + L +L +++ G + R G
Sbjct: 319 VQNGRYNEALRLFRQMVTAK--VKPGAVAFSSVIPACAHLATLHLGKQLHGYV---LRGG 373
Query: 392 CSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAM 451
+ I + ++ +Y K N RK +D M D S+T +I GH +G +A+
Sbjct: 374 FGSNIFIASALVDMYSKCGNIKAARKIFDRMNV----LDEVSWTAIIMGHALHGHGHEAV 429
Query: 452 RYFREMTSKGM 462
F EM +G+
Sbjct: 430 SLFEEMKRQGV 440
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 19/245 (7%)
Query: 130 FEELHQVFDEM--SHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAF 187
FE L + F EM ++ N T ++L+ A+ +E+ + + GLD L
Sbjct: 265 FEAL-RTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI 323
Query: 188 RTLLMWLCRYKHVEDAETLFHSKAREFQLH-RDIKTWNVILNGWCVLGNAHEAKRVWKDI 246
L+ R +E + +F ++H RD+ +WN +++ + V G +A ++++++
Sbjct: 324 SALVTMYGRCGKLEVGQRVFD------RMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM 377
Query: 247 MASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKK 306
+A+ P T+ + + F MW + KP + C++D L
Sbjct: 378 LANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDH-GIKPQIEHYACMVDLLGRAN 436
Query: 307 RVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMP-NAV 365
R+ EA ++ QDM+ EP + SL+ R+ EL E R+ + P NA
Sbjct: 437 RLDEAAKMVQDMR---TEPGPKVWGSLLGSC----RIHGNVELAERASRRLFALEPKNAG 489
Query: 366 TYSCL 370
Y L
Sbjct: 490 NYVLL 494
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 110/260 (42%), Gaps = 17/260 (6%)
Query: 117 CNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTRE 176
CN ++ G++ + +VFD M R + T+ +++ + EA+ +F +
Sbjct: 268 CNAMIVGFGEVGEISKARRVFDLMEDR----DNATWRGMIKAYERKGFELEALDLFAQMQ 323
Query: 177 QFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNA 236
+ G+ + ++L ++ + H+ Q D+ +V++ + G
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQV-HAHLVRCQFDDDVYVASVLMTMYVKCGEL 382
Query: 237 HEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICN 296
+AK V+ D +SK D+ + + I F M + G P+ V
Sbjct: 383 VKAKLVF-DRFSSK---DIIMWNSIISGYASHGLGEEALKIFHEMPSSGT--MPNKVTLI 436
Query: 297 CIIDALCFKKRVPEALEVFQDMKERGC-EPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
I+ A + ++ E LE+F+ M+ + C P V Y+ + L + +++K EL+E M
Sbjct: 437 AILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTI 496
Query: 356 KKGSCMPNAVTYSCLLNSLK 375
K P+A + LL + K
Sbjct: 497 K-----PDATVWGALLGACK 511
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 104/260 (40%), Gaps = 17/260 (6%)
Query: 207 FHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXX 266
+ +K E RD TWN +L+G+C G+ +A +++++ ++ PD T T I
Sbjct: 105 YAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLI---- 160
Query: 267 XXXXXXXXXXXFRGMWNEGCNCKPD--VVICNCIIDALCFKKRVPEALEVFQDMKERGCE 324
M G D V + N I + A VF+ + +RG +
Sbjct: 161 QSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAI-DRG-D 218
Query: 325 PNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVP-GV 383
V ++NS+ K + L M R++ P+ T+ L S + PE + G
Sbjct: 219 RTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK--PDLSTFINLAASCQNPETLTQGR 276
Query: 384 LERMERNGCSLSDDI--YNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGH 441
L DI N + +Y K ++ R +D M C S+T+MI G+
Sbjct: 277 LIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTC----VSWTVMISGY 332
Query: 442 YENGKMKDAMRYFREMTSKG 461
E G M +A+ F M G
Sbjct: 333 AEKGDMDEALALFHAMIKSG 352
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 139/342 (40%), Gaps = 24/342 (7%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVE--EAISMFYTR 175
N +++ L K F +F +M ++ TFS + + F++ V E + F +
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
Query: 176 EQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGN 235
FG + +L+ + + + V+ A +F RD+ +WN I+NG+ G
Sbjct: 224 SGFGERNSVG--NSLVAFYLKNQRVDSARKVFDE-----MTERDVISWNSIINGYVSNGL 276
Query: 236 AHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVIC 295
A + V+ ++ S DL T + + + + C + D C
Sbjct: 277 AEKGLSVFVQMLVSGIEIDLATIVS-VFAGCADSRLISLGRAVHSIGVKACFSRED-RFC 334
Query: 296 NCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMER 355
N ++D + A VF++M +R +V +Y S+I + + +L E+ME
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDR----SVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 356 KKGSCMPNAVTYSCLLNS---LKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQ 412
+ S P+ T + +LN + +E V E ++ N + N ++ +Y K +
Sbjct: 391 EGIS--PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 413 DGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYF 454
+ EM D S+ +I G+ +N +A+ F
Sbjct: 449 QEAELVFSEMRV----KDIISWNTIIGGYSKNCYANEALSLF 486
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 100/247 (40%), Gaps = 10/247 (4%)
Query: 110 YAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAI 169
++ R CN +LD+ K + VF EMS R + ++++++ +A EA+
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVV----SYTSMIAGYAREGLAGEAV 382
Query: 170 SMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
+F E+ G+ D+ +L RY+ +++ + + H +E L DI N +++
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV-HEWIKENDLGFDIFVSNALMDM 441
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCK 289
+ G+ EA+ V+ ++ D+ ++ T I F + E
Sbjct: 442 YAKCGSMQEAELVFSEMRV----KDIISWNTIIGGYSKNCYANEALSLFNLLLEEK-RFS 496
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
PD C++ A + E+ + G + NSL+ K + + L
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHML 556
Query: 350 VEDMERK 356
+D+ K
Sbjct: 557 FDDIASK 563
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
PD CN ++ +LC ++ EA++V ++M GC P+V +Y ++I LC R+ V ++
Sbjct: 169 PDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDVESYGAVINSLCLARKTTDVVKI 228
Query: 350 VEDMERKKG 358
V++M K G
Sbjct: 229 VKEMVSKAG 237
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 137/362 (37%), Gaps = 16/362 (4%)
Query: 97 ALVFFNWASKADS---YAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
AL FF+W S Y ++ N L +L + + E V DEM ++ DT+
Sbjct: 243 ALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYI 302
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
+ R+F + + E + ++ + LL +L + D + +F +
Sbjct: 303 KVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPN-PDLDLVFRVSRKY 361
Query: 214 FQLHRDIK--TWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXX 271
+ + ++ I +G EA+ + K + + PD TY+ +
Sbjct: 362 ESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRL 421
Query: 272 XXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYN 331
M +GC PD+ +I C + +AL F +M E+G + + +
Sbjct: 422 EEARGVLDQMEAQGCF--PDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLD 479
Query: 332 SLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERME 388
LI + E + +M K + P TY L++ L K EE +L+ M+
Sbjct: 480 VLIDGFVIHNKFEGASIFLMEM-VKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMK 538
Query: 389 RNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMK 448
+ + ++ L K+ + +K D + P +Y +I Y G++
Sbjct: 539 KQNYPAYAEAFDGYL---AKFGTLEDAKKFLDVLSSKD-SPSFAAYFHVIEAFYREGRLT 594
Query: 449 DA 450
DA
Sbjct: 595 DA 596
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 82/210 (39%), Gaps = 42/210 (20%)
Query: 292 VVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVE 351
V N + L V E V +MK G + ++ TY + + K R M + +L E
Sbjct: 263 TVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYE 322
Query: 352 DMERKKGSCMPNAVTYSCLLNSLKGP-----EEVPGVLERMERNGCSLSDDIYNLVLRLY 406
M G P+ S LL L G + V V + E G SLS +Y+ + R
Sbjct: 323 YM--MDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSL 380
Query: 407 M---KWDNQD-----------------------GL---------RKTWDEMERNGCGPDR 431
++D + GL R D+ME GC PD
Sbjct: 381 TSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDI 440
Query: 432 RSYTIMIHGHYENGKMKDAMRYFREMTSKG 461
+++TI+I GH +N ++ A+ F M KG
Sbjct: 441 KTWTILIQGHCKNNELDKALACFANMLEKG 470
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 116/263 (44%), Gaps = 10/263 (3%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDI-LGKMSRFEELHQVFDEMSHREGLVNE 149
+SD A F++AS+ ++ SR + IL + LG+ F + V + +
Sbjct: 61 QSDPLLAKEIFDYASQQPNFR-HSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTG 119
Query: 150 DTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYK-HVEDAETLFH 208
+ F+ L++ +A A E+ +S FY +F +L L ++ +++ A LF
Sbjct: 120 EIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFK 179
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXX 268
S +R + + +++N+++ +C+ + A +++ ++ PD+ +Y I
Sbjct: 180 S-SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRK 238
Query: 269 XXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVA 328
M N+G PD +I LC + E + ++M +G P+ +
Sbjct: 239 GQVNGAMELLDDMLNKGF--VPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFS 292
Query: 329 TYNSLIKHLCKIRRMEKVYELVE 351
N L+K C ++E+ ++VE
Sbjct: 293 VSNCLVKGFCSFGKVEEACDVVE 315
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 144/346 (41%), Gaps = 33/346 (9%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL---RRFAAAHKVEEAISMFYT 174
N ++ +L K R E+ +F +M + T +T+L R AA +E +
Sbjct: 306 NSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILK 365
Query: 175 REQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLG 234
++ D+ +L+ + VE + +F + L +D+ +WN++LN + + G
Sbjct: 366 SKE---KPDVPLLNSLMDMYGKCGEVEYSRRVF-----DVMLTKDLASWNIMLNCYAING 417
Query: 235 NAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVI 294
N E +++ ++ S PD T+ + F M E P +
Sbjct: 418 NIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTE-FRVSPALEH 476
Query: 295 CNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL-VEDM 353
C++D L ++ EA++V + M + P+ + + SL+ C++ V E+ +++
Sbjct: 477 YACLVDILGRAGKIKEAVKVIETMPFK---PSASIWGSLLNS-CRLHGNVSVGEIAAKEL 532
Query: 354 ERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERN------GCS---LSDDIYNLVLR 404
+ N V S + K + V + E M++ GCS + D I V
Sbjct: 533 FVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAG 592
Query: 405 LYMKWDNQDGLRKTWDEM----ERNGCGPDRRSYTIMIHGHYENGK 446
++ N D +K W E+ E++G P+ ++++H E K
Sbjct: 593 GGYEFRNSDEYKKVWTELQEAIEKSGYSPNT---SVVLHDVDEETK 635
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 138/337 (40%), Gaps = 49/337 (14%)
Query: 153 STLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAR 212
S LL +A + +A +FY + D + + +L+ L +EDA LF
Sbjct: 178 SPLLYMYANVGCISDAKKVFYGLD----DRNTVMYNSLMGGLLACGMIEDALQLFRG--- 230
Query: 213 EFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXX 272
+ +D +W ++ G G A EA ++++ + D + + + +
Sbjct: 231 ---MEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGL---- 283
Query: 273 XXXXXFRGMWNEG---------CNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGC 323
G NEG N + + + + +ID C K + A VF MK++
Sbjct: 284 -------GAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK-- 334
Query: 324 EPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGV 383
NV ++ +++ + R E+ ++ DM+R P+ T L ++ V +
Sbjct: 335 --NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS--GIDPDHYT---LGQAISACANVSSL 387
Query: 384 LERMERNGCSLSDD------IYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIM 437
E + +G +++ + N ++ LY K + D + ++EM D S+T M
Sbjct: 388 EEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAM 443
Query: 438 IHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
+ + + G+ + ++ F +M G+ + T VIS
Sbjct: 444 VSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVIS 480
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 20/266 (7%)
Query: 177 QFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNA 236
+ GLD ++ +L+ C+ K V+ A ++F R + +WN ++ G+ G
Sbjct: 365 ELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS-----RTLVSWNAMILGFAQNGRP 419
Query: 237 HEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICN 296
+A + + + +PD FTY + I G+ C K +V +
Sbjct: 420 IDALNYFSQMRSRTVKPDTFTYVSVI-TAIAELSITHHAKWIHGVVMRSCLDK-NVFVTT 477
Query: 297 CIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
++D + A +F M ER +V T+N++I + EL E+M+
Sbjct: 478 ALVDMYAKCGAIMIARLIFDMMSER----HVTTWNAMIDGYGTHGFGKAALELFEEMQ-- 531
Query: 357 KGSCMPNAVTYSCLLNSLKGPEEVPGVLE---RMERN-GCSLSDDIYNLVLRLYMKWDNQ 412
KG+ PN VT+ ++++ V L+ M+ N LS D Y ++ L +
Sbjct: 532 KGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGR- 590
Query: 413 DGLRKTWDEMERNGCGPDRRSYTIMI 438
L + WD + + P Y M+
Sbjct: 591 --LNEAWDFIMQMPVKPAVNVYGAML 614
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 183 DLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRV 242
D+ A +L+ C+ + DA LF E +D+ WN +++G+ GNA +A +
Sbjct: 318 DVTALTSLISMYCKCGELGDAWKLF-----EVMKKKDVVAWNAMISGYAQHGNADKALCL 372
Query: 243 WKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDAL 302
+++++ +K RPD T+ + F M + +P C++D L
Sbjct: 373 FREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD-YKVEPQPDHYTCMVDLL 431
Query: 303 CFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMP 362
++ EAL++ + M R P+ A + +L+ C++ + ++ E + + S
Sbjct: 432 GRAGKLEEALKLIRSMPFR---PHAAVFGTLLG-ACRVHKNVELAEFAAEKLLQLNS--Q 485
Query: 363 NAVTYSCLLNSLKGP---EEVPGVLERMERN 390
NA Y L N E+V V +RM+ +
Sbjct: 486 NAAGYVQLANIYASKNRWEDVARVRKRMKES 516
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 7/177 (3%)
Query: 254 DLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALE 313
D FTY T + F M +G D V +I + V A+
Sbjct: 121 DHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLI--DTVTYTSLIHWVSSSGDVDGAMR 178
Query: 314 VFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS 373
++++M++ GCEP V +Y + +K L R+E+ E+ ++M R + S PN TY+ L+
Sbjct: 179 LWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVS--PNCHTYTVLMEY 236
Query: 374 LKGP---EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGC 427
L EE + +M+ G N+++ +K+ + + M+ NG
Sbjct: 237 LVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV 293
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 102/249 (40%), Gaps = 7/249 (2%)
Query: 8 RRTTRILETLFPLNPNPVK--SIPPPLFTRRFLHSQPEHAAGAGAFVQNLLKFRRDKPTD 65
R + ++L +L L P K S P L + L P+ + V N+ + D
Sbjct: 18 RSSVKLLHSLPRLKPTNSKRFSQKPKLVKTQTL---PDPSVYTRDIVSNIYNILKYSNWD 74
Query: 66 QVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILG 125
+ L G + H + A +FFNWA++ + +LDI G
Sbjct: 75 SAQEQLPHLGVRWDSHIINRVLKAH-PPMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFG 133
Query: 126 KMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLD 185
+ R + ++ VF M + L++ T+++L+ +++ V+ A+ ++ G + +
Sbjct: 134 EAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVV 193
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
++ + L VE+A ++ R ++ + T+ V++ G EA ++
Sbjct: 194 SYTAYMKMLFADGRVEEATEVYKEMLRS-RVSPNCHTYTVLMEYLVATGKCEEALDIFFK 252
Query: 246 IMASKCRPD 254
+ +PD
Sbjct: 253 MQEIGVQPD 261
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 139/372 (37%), Gaps = 37/372 (9%)
Query: 124 LGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLD 183
LG E +F +M R + TF +LLR A+ + + + ++GL+LD
Sbjct: 429 LGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLD 488
Query: 184 LDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVW 243
+ A L+ ++D+ +F E ++ +D+ WN + G+ EA ++
Sbjct: 489 IFAGSALIDVYSNCYCLKDSRLVFD----EMKV-KDLVIWNSMFAGYVQQSENEEALNLF 543
Query: 244 KDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKP------------- 290
++ S+ RPD FT+A + + G C P
Sbjct: 544 LELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKC 603
Query: 291 ----------------DVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLI 334
DVV N +I + +AL++ + M G EPN T+ ++
Sbjct: 604 GSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVL 663
Query: 335 KHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGCSL 394
+E + E M R P Y C+++ L + E +E+
Sbjct: 664 SACSHAGLVEDGLKQFELMLRF--GIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKP 721
Query: 395 SDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYF 454
+ ++ +L K N + L + EM D S+T++ + + G +A +
Sbjct: 722 AAIVWRSLLSGCAKAGNVE-LAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVR 780
Query: 455 REMTSKGMVAEP 466
M +G+V EP
Sbjct: 781 ERMKVEGVVKEP 792
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
P V+ +ID + +A E+F++M +G PNV TYNS+I+ LC + L
Sbjct: 722 PSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWL 781
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLERMERNG 391
+++ME + C PN V YS L+ L+ E V++ M + G
Sbjct: 782 LKEMESR--GCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 253 PDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEAL 312
P + Y T I FR M +G P+V N +I LC EA
Sbjct: 722 PSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQ--LPNVFTYNSMIRGLCMAGEFREAC 779
Query: 313 EVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 356
+ ++M+ RGC PN Y++L+ +L K ++ + +++++M +K
Sbjct: 780 WLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKK 823
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 197 YKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRP-DL 255
++ + DA +F + R+I TW +++G+ G ++A +++ ++ S+ +
Sbjct: 53 FRLLSDAHKVFDEMSE-----RNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANE 107
Query: 256 FTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVF 315
F Y+ + + + E N + DVV+ N ++D R+ EA F
Sbjct: 108 FMYSAVLKACGLVGDIQLGILVYERIGKE--NLRGDVVLMNSVVDMYVKNGRLIEANSSF 165
Query: 316 QDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSL- 374
+++ P+ ++N+LI CK M++ L M + PN V+++CL++
Sbjct: 166 KEI----LRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQ------PNVVSWNCLISGFV 215
Query: 375 -KGPEEVPGVLERMERNGCSL 394
KG L RM+R G L
Sbjct: 216 DKGSPRALEFLVRMQREGLVL 236
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/386 (19%), Positives = 143/386 (37%), Gaps = 50/386 (12%)
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHRE---------------------G 145
+ ++ + + ++++ K +VF+EM R+
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 146 LVNEDTFS-------TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYK 198
LVNE F TLL + ++ + + +G D D+ ++L C+
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCD 193
Query: 199 HVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTY 258
HV DA+ LF + RD+ +WN +++G+ +GN E ++ + RPD T+
Sbjct: 194 HVGDAKDLFDQMEQ-----RDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
Query: 259 ATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDM 318
+ + G + D+ + +I + + V + +
Sbjct: 249 GASLSVSGTMCDLEMGRMLHCQIVKTGFDV--DMHLKTALITMYLKCGKEEASYRVLETI 306
Query: 319 KERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNA---VTYSCL-LNSL 374
+ +V + +I L ++ R EK + +M + A V SC L S
Sbjct: 307 PNK----DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSF 362
Query: 375 KGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSY 434
V G + R+G +L N ++ +Y K + D ++ M D S+
Sbjct: 363 DLGASVHGYV---LRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNER----DLVSW 415
Query: 435 TIMIHGHYENGKMKDAMRYFREMTSK 460
+I G+ +N + A+ F EM K
Sbjct: 416 NAIISGYAQNVDLCKALLLFEEMKFK 441
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 150/382 (39%), Gaps = 52/382 (13%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLV-NEDTFSTLLRRFAAAHKVEEAISMFYTRE 176
N ++ + R EE F M H+EG V NE +F+++L + + + + + +
Sbjct: 121 NSMVSGFAQHDRCEEALCYF-AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 177 QFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNA 236
+ D+ L+ + +V DA+ +F R++ +WN ++ + G A
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-----DRNVVSWNSLITCFEQNGPA 234
Query: 237 HEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICN 296
EA V++ ++ S+ PD T A+ I G + + D+++ N
Sbjct: 235 VEALDVFQMMLESRVEPDEVTLASVI-SACASLSAIKVGQEVHGRVVKNDKLRNDIILSN 293
Query: 297 CIIDALCFKKRVPEALEVFQDMKERG---------------------------CEPNVAT 329
+D R+ EA +F M R E NV +
Sbjct: 294 AFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVS 353
Query: 330 YNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLK-------GPEEVPG 382
+N+LI + E+ L ++R+ S P +++ +L + G +
Sbjct: 354 WNALIAGYTQNGENEEALSLFCLLKRE--SVCPTHYSFANILKACADLAELHLGMQAHVH 411
Query: 383 VLERMERNGCSLSDDIY--NLVLRLYMKWD-NQDGLRKTWDEMERNGCGPDRRSYTIMIH 439
VL+ + DDI+ N ++ +Y+K ++G MER D S+ MI
Sbjct: 412 VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER-----DCVSWNAMII 466
Query: 440 GHYENGKMKDAMRYFREMTSKG 461
G +NG +A+ FREM G
Sbjct: 467 GFAQNGYGNEALELFREMLESG 488
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 142/346 (41%), Gaps = 37/346 (10%)
Query: 122 DILGKMSRFEELHQVFDEMSHREGLV-NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGL 180
D+ G +S F E+ R+G+ NE TFST L+ + +E+ + + + G
Sbjct: 87 DLKGSLSLFSEMG--------RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGF 138
Query: 181 DLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAK 240
++ ++ +L+ + + +AE +F + R + +WN ++ G+ G +A
Sbjct: 139 EMMVEVGNSLVDMYSKCGRINEAEKVFRRI-----VDRSLISWNAMIAGFVHAGYGSKAL 193
Query: 241 RVWKDIMAS--KCRPDLFTYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCI 298
+ + + K RPD FT + + + G +C I +
Sbjct: 194 DTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSL 253
Query: 299 IDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKG 358
+D + A + F +KE+ + +++SLI + E VE M K
Sbjct: 254 VDLYVKCGYLFSARKAFDQIKEK----TMISWSSLILGYAQEG------EFVEAMGLFKR 303
Query: 359 SCMPNAVTYSCLLNSLKGPEEVPGVLERMERNGC-------SLSDDIYNLVLRLYMKWDN 411
N+ S L+S+ G +L + ++ L + N V+ +Y+K
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGL 363
Query: 412 QDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREM 457
D K + EM+ D S+T++I G+ ++G K ++R F EM
Sbjct: 364 VDEAEKCFAEMQLK----DVISWTVVITGYGKHGLGKKSVRIFYEM 405
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 151/389 (38%), Gaps = 79/389 (20%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
+ + V ++++I GK ++FDEM R+ + + ++ ++ ++EA
Sbjct: 153 GFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHV----AATVMINCYSECGFIKEA 208
Query: 169 ISMF----------YTREQFGL------DLDLDAFRTLLM---------WLCRYKHVEDA 203
+ +F +T GL + L+ FR + M +C D
Sbjct: 209 LELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDL 268
Query: 204 ETL-----FHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTY 258
L HS ++ N ++N + G+ +EA+RV++ +M K D+ +Y
Sbjct: 269 GALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFR-VMRDK---DVISY 324
Query: 259 ATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDM 318
T I FR M N G +P+ V +++A + LEVF M
Sbjct: 325 NTMISGLAMHGASVEAINEFRDMVNRGF--RPNQVTLVALLNACSHGGLLDIGLEVFNSM 382
Query: 319 KER-GCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP 377
K EP + Y ++ L ++ R+E+ Y +E++ + P+ + LL++ K
Sbjct: 383 KRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIE-----PDHIMLGTLLSACK-- 435
Query: 378 EEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIM 437
+ G +E E+ + RL+ + PD +Y ++
Sbjct: 436 --IHGNMELGEK-----------IAKRLFESEN------------------PDSGTYVLL 464
Query: 438 IHGHYENGKMKDAMRYFREMTSKGMVAEP 466
+ + +GK K++ M G+ EP
Sbjct: 465 SNLYASSGKWKESTEIRESMRDSGIEKEP 493
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 308 VPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTY 367
+ EALE+FQD+K + + + ++I L + + M K EL +M+ + S N T
Sbjct: 205 IKEALELFQDVKIK----DTVCWTAMIDGLVRNKEMNKALELFREMQMENVS--ANEFTA 258
Query: 368 SCLLNS---LKGPEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMER 424
C+L++ L E V +E LS+ + N ++ +Y + + + R+ + M
Sbjct: 259 VCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMR- 317
Query: 425 NGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISMNS 477
D SY MI G +G +A+ FR+M ++G P LV +N+
Sbjct: 318 ---DKDVISYNTMISGLAMHGASVEAINEFRDMVNRGF--RPNQVTLVALLNA 365
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Query: 257 TYATFIXXXXXXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEAL---- 312
TY T I F+ M ++G PD++ N ++D LC ++ +AL
Sbjct: 18 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGV--PPDIMTYNILLDGLCKNGKLEKALVAGK 75
Query: 313 -----EVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTY 367
++F + +G +PNV TY ++I CK E+ Y L M K+ +P++ TY
Sbjct: 76 VEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM--KEDGPLPDSGTY 133
Query: 368 SCLLNS 373
+ L+ +
Sbjct: 134 NTLIRA 139
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 14/176 (7%)
Query: 312 LEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLL 371
+E+F++M +RG N TY +LI+ L + + E+ ++M P+ +TY+ LL
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD--GVPPDIMTYNILL 58
Query: 372 NSL--KGPEEVPGVLERMERN---GCSLSDD-------IYNLVLRLYMKWDNQDGLRKTW 419
+ L G E V ++E CSLS Y ++ + K ++ +
Sbjct: 59 DGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLF 118
Query: 420 DEMERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMVAEPRTEKLVISM 475
+M+ +G PD +Y +I H +G + +EM S + T LV M
Sbjct: 119 RKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 174
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXXXXXXXXXXXXXF 278
D N+I+ + EA RV+K++ P+ +TY+ + +
Sbjct: 222 DTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFY 281
Query: 279 RGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLC 338
+ M +G P+ +I +L ++R+ EA+EV DM P++ TYN+++ LC
Sbjct: 282 KEMQVKGM--VPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELC 339
Query: 339 KIRRMEKVYELVEDMERK 356
+ R + E+VE+ +++
Sbjct: 340 RGGRGSEALEMVEEWKKR 357
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 290 PDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYEL 349
PD + N II A V EA+ VF++M G EPN TY+ L+K +C+ R+ +
Sbjct: 221 PDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGF 280
Query: 350 VEDMERKKGSCMPNAVTYSCLLNSL---KGPEEVPGVLERMERNGCSLSDDIYNLVL 403
++M+ K +PN Y L+ SL + +E V+ M N S YN VL
Sbjct: 281 YKEMQVK--GMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVL 335
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 314 VFQDMKERGCEPNVATYNSLIKHLCKIRRM-EKVYELVEDMERKKGSCMPNAVTYSCL-- 370
+ +++ CE +V YN +I+ C + + + +++ M R S P+ TY+ L
Sbjct: 130 LIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDS-KPDLETYTLLLS 188
Query: 371 -----LNSLKG----PEEVPGVLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDE 421
N L V + ++M+ NG + N++++ Y K D + + E
Sbjct: 189 SLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKE 248
Query: 422 MERNGCGPDRRSYTIMIHGHYENGKMKDAMRYFREMTSKGMV 463
M G P+ +Y+ ++ G E G++ + +++EM KGMV
Sbjct: 249 MALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMV 290
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/320 (16%), Positives = 130/320 (40%), Gaps = 34/320 (10%)
Query: 147 VNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETL 206
++E +F+++++ A ++ + + ++G D + L++ + + DA L
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 207 FHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIXXXX 266
F +E ++ +W +++G+ EA ++ ++ RP+ FTY+ +
Sbjct: 353 F----KEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408
Query: 267 XXXXXXXXXXXFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPN 326
+ N + + ++DA +V EA +VF + ++ +
Sbjct: 409 VISPSEVHAQVVK------TNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK----D 458
Query: 327 VATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGPEEVPG---- 382
+ +++++ + E ++ ++ KG PN T+S +LN G
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGEL--TKGGIKPNEFTFSSILNVCAATNASMGQGKQ 516
Query: 383 -----VLERMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIM 437
+ R++ + C + + +L +Y K N + + + D S+ M
Sbjct: 517 FHGFAIKSRLDSSLC-----VSSALLTMYAKKGNIESAEEVFKRQREK----DLVSWNSM 567
Query: 438 IHGHYENGKMKDAMRYFREM 457
I G+ ++G+ A+ F+EM
Sbjct: 568 ISGYAQHGQAMKALDVFKEM 587
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 329 TYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNSLKGP---EEVPGVLE 385
Y+ LI LCK+ R++ ++ DM + P+ TY +L SL EE V+E
Sbjct: 109 AYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPS--TYHPILCSLTRKYKIEEAWRVVE 166
Query: 386 RMERNGCSLSDDIYNLVLRLYMKWDNQDGLRKTWDEMERNGCGPDRRSYTIMIHGHYENG 445
M S+ YN L + + + ++E +G PD RSY ++ G G
Sbjct: 167 SMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAG 226
Query: 446 KMKDAMRYFREMTSKGMVAEPRTEKLVIS 474
K++ AM R M G+ T VI+
Sbjct: 227 KVEAAMAILRRMEEDGVTVLYSTHAHVIT 255