Miyakogusa Predicted Gene

Lj1g3v2127290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2127290.1 tr|B9GRK7|B9GRK7_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_412109
PE=4,60.98,2e-19,SEC14 CYTOSOLIC FACTOR-RELATED,NULL; SEC14 RELATED
PROTEIN,NULL; coiled-coil,NULL,CUFF.28615.1
         (84 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19650.2 | Symbols:  | Sec14p-like phosphatidylinositol trans...   103   3e-23
AT1G19650.1 | Symbols:  | Sec14p-like phosphatidylinositol trans...   102   5e-23
AT1G75370.1 | Symbols:  | Sec14p-like phosphatidylinositol trans...    95   1e-20
AT1G75370.2 | Symbols:  | Sec14p-like phosphatidylinositol trans...    94   2e-20
AT2G21520.1 | Symbols:  | Sec14p-like phosphatidylinositol trans...    93   4e-20
AT2G21520.2 | Symbols:  | Sec14p-like phosphatidylinositol trans...    93   4e-20
AT4G39170.1 | Symbols:  | Sec14p-like phosphatidylinositol trans...    91   2e-19
AT4G39170.2 | Symbols:  | Sec14p-like phosphatidylinositol trans...    91   2e-19
AT2G18180.1 | Symbols:  | Sec14p-like phosphatidylinositol trans...    62   6e-11
AT4G36490.1 | Symbols: ATSFH12, SFH12 | SEC14-like 12 | chr4:172...    62   6e-11
AT4G34580.1 | Symbols: COW1, SRH1 | Sec14p-like phosphatidylinos...    49   7e-07
AT2G21540.2 | Symbols: ATSFH3, SFH3 | SEC14-like 3 | chr2:922083...    49   7e-07
AT2G21540.1 | Symbols: ATSFH3, SFH3 | SEC14-like 3 | chr2:922083...    49   7e-07
AT2G21540.3 | Symbols: SFH3 | SEC14-like 3 | chr2:9220831-922373...    49   8e-07

>AT1G19650.2 | Symbols:  | Sec14p-like phosphatidylinositol transfer
           family protein | chr1:6796431-6799057 REVERSE LENGTH=536
          Length = 536

 Score =  103 bits (256), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/79 (63%), Positives = 66/79 (83%)

Query: 6   SSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEALIKQ 65
           SS L RLG+LE++++ L S+ + MPH KEELLNAA+YRVDALEAE ITTKKALHEALI+Q
Sbjct: 455 SSVLSRLGDLEKQIENLHSRKSEMPHEKEELLNAAVYRVDALEAELITTKKALHEALIRQ 514

Query: 66  EELMTYKDNQEKSKFKTRR 84
           EEL+ Y D Q+++K + ++
Sbjct: 515 EELLGYIDRQKEAKCRRKK 533


>AT1G19650.1 | Symbols:  | Sec14p-like phosphatidylinositol transfer
           family protein | chr1:6796431-6799537 REVERSE LENGTH=608
          Length = 608

 Score =  102 bits (254), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 50/79 (63%), Positives = 66/79 (83%)

Query: 6   SSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEALIKQ 65
           SS L RLG+LE++++ L S+ + MPH KEELLNAA+YRVDALEAE ITTKKALHEALI+Q
Sbjct: 527 SSVLSRLGDLEKQIENLHSRKSEMPHEKEELLNAAVYRVDALEAELITTKKALHEALIRQ 586

Query: 66  EELMTYKDNQEKSKFKTRR 84
           EEL+ Y D Q+++K + ++
Sbjct: 587 EELLGYIDRQKEAKCRRKK 605


>AT1G75370.1 | Symbols:  | Sec14p-like phosphatidylinositol transfer
           family protein | chr1:28276657-28279798 REVERSE
           LENGTH=612
          Length = 612

 Score = 94.7 bits (234), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 61/78 (78%)

Query: 3   NLSSSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEAL 62
           N+ SS + RLG+LE++V+ L SK + MP  KEELLN A+YRVDALEAE I TKKALHEAL
Sbjct: 527 NVFSSVVNRLGDLEKQVETLHSKRHEMPREKEELLNTAVYRVDALEAELIATKKALHEAL 586

Query: 63  IKQEELMTYKDNQEKSKF 80
           ++Q++L+ Y D +E  K+
Sbjct: 587 MRQDDLLAYIDREEDEKY 604


>AT1G75370.2 | Symbols:  | Sec14p-like phosphatidylinositol transfer
           family protein | chr1:28276440-28279798 REVERSE
           LENGTH=668
          Length = 668

 Score = 94.4 bits (233), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/81 (58%), Positives = 62/81 (76%)

Query: 3   NLSSSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEAL 62
           N+ SS + RLG+LE++V+ L SK + MP  KEELLN A+YRVDALEAE I TKKALHEAL
Sbjct: 527 NVFSSVVNRLGDLEKQVETLHSKRHEMPREKEELLNTAVYRVDALEAELIATKKALHEAL 586

Query: 63  IKQEELMTYKDNQEKSKFKTR 83
           ++Q++L+ Y D +E  K+  R
Sbjct: 587 MRQDDLLAYIDREEDEKYHKR 607


>AT2G21520.1 | Symbols:  | Sec14p-like phosphatidylinositol transfer
           family protein | chr2:9215956-9218953 FORWARD LENGTH=633
          Length = 633

 Score = 92.8 bits (229), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 47/80 (58%), Positives = 63/80 (78%)

Query: 2   TNLSSSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEA 61
           T+L +   ++L ELE K+  L+SK N MP+ KEELLNAA+ RVDALEAE I TKKAL+EA
Sbjct: 541 TDLLNCVTKKLTELEGKIGTLQSKPNEMPYEKEELLNAAVCRVDALEAELIATKKALYEA 600

Query: 62  LIKQEELMTYKDNQEKSKFK 81
           L++QEEL+ Y D QE+++F+
Sbjct: 601 LMRQEELLAYIDRQEEAQFQ 620


>AT2G21520.2 | Symbols:  | Sec14p-like phosphatidylinositol transfer
           family protein | chr2:9215956-9218953 FORWARD LENGTH=637
          Length = 637

 Score = 92.8 bits (229), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 47/80 (58%), Positives = 63/80 (78%)

Query: 2   TNLSSSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEA 61
           T+L +   ++L ELE K+  L+SK N MP+ KEELLNAA+ RVDALEAE I TKKAL+EA
Sbjct: 545 TDLLNCVTKKLTELEGKIGTLQSKPNEMPYEKEELLNAAVCRVDALEAELIATKKALYEA 604

Query: 62  LIKQEELMTYKDNQEKSKFK 81
           L++QEEL+ Y D QE+++F+
Sbjct: 605 LMRQEELLAYIDRQEEAQFQ 624


>AT4G39170.1 | Symbols:  | Sec14p-like phosphatidylinositol transfer
           family protein | chr4:18240887-18243621 FORWARD
           LENGTH=614
          Length = 614

 Score = 90.9 bits (224), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/77 (61%), Positives = 62/77 (80%)

Query: 3   NLSSSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEAL 62
           +L +S L++L ELEEK+  L+SK + MP+ KEELLNAA+ RVDALEAE I TKKAL+EAL
Sbjct: 525 DLLNSVLKKLTELEEKIGALQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYEAL 584

Query: 63  IKQEELMTYKDNQEKSK 79
           ++QEEL+ Y D QE ++
Sbjct: 585 MRQEELLAYIDRQEAAQ 601


>AT4G39170.2 | Symbols:  | Sec14p-like phosphatidylinositol transfer
           family protein | chr4:18240887-18243621 FORWARD
           LENGTH=612
          Length = 612

 Score = 90.9 bits (224), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/77 (61%), Positives = 62/77 (80%)

Query: 3   NLSSSTLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEAL 62
           +L +S L++L ELEEK+  L+SK + MP+ KEELLNAA+ RVDALEAE I TKKAL+EAL
Sbjct: 523 DLLNSVLKKLTELEEKIGALQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYEAL 582

Query: 63  IKQEELMTYKDNQEKSK 79
           ++QEEL+ Y D QE ++
Sbjct: 583 MRQEELLAYIDRQEAAQ 599


>AT2G18180.1 | Symbols:  | Sec14p-like phosphatidylinositol transfer
           family protein | chr2:7911054-7913695 REVERSE LENGTH=558
          Length = 558

 Score = 62.4 bits (150), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 45/65 (69%)

Query: 7   STLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEALIKQE 66
           + ++R+ ELE+KV  L ++   MP  KEE+LNAAI R D LE E   TKKAL ++L +QE
Sbjct: 468 AVMKRMAELEQKVTNLSAQPATMPPEKEEMLNAAISRADFLEQELAATKKALDDSLTRQE 527

Query: 67  ELMTY 71
           +L+ Y
Sbjct: 528 DLVAY 532


>AT4G36490.1 | Symbols: ATSFH12, SFH12 | SEC14-like 12 |
           chr4:17222099-17224808 FORWARD LENGTH=543
          Length = 543

 Score = 62.4 bits (150), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 46/65 (70%)

Query: 7   STLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEALIKQE 66
           + ++R+ ELE+KV +L ++   MP  KEE+LNAAI R + LE E   TKKAL ++L +QE
Sbjct: 465 AIMKRMAELEQKVTVLSAQPTVMPPDKEEMLNAAISRSNVLEQELAATKKALDDSLGRQE 524

Query: 67  ELMTY 71
           EL+ Y
Sbjct: 525 ELVAY 529


>AT4G34580.1 | Symbols: COW1, SRH1 | Sec14p-like
           phosphatidylinositol transfer family protein |
           chr4:16515422-16518527 FORWARD LENGTH=554
          Length = 554

 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 40/63 (63%)

Query: 9   LERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEALIKQEEL 68
           ++R+ ELE+K   L+ K   +   KEE L AA+ RV  LE E   TKKAL EAL+ Q+E+
Sbjct: 478 VKRMAELEDKCMFLDLKPAHVESEKEEKLQAALNRVQVLEQELTETKKALEEALVSQKEI 537

Query: 69  MTY 71
           + Y
Sbjct: 538 LAY 540


>AT2G21540.2 | Symbols: ATSFH3, SFH3 | SEC14-like 3 |
           chr2:9220831-9223737 REVERSE LENGTH=548
          Length = 548

 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 40/67 (59%)

Query: 7   STLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEALIKQE 66
           S ++R+ ELEEK   L+++  A    KE++L AA+ RVD LE +   TKK L E +  Q 
Sbjct: 471 SMVKRMAELEEKCRSLDNQPAAFSPEKEQILTAALSRVDELELQLAQTKKTLEETMATQH 530

Query: 67  ELMTYKD 73
            +M Y D
Sbjct: 531 VIMAYID 537


>AT2G21540.1 | Symbols: ATSFH3, SFH3 | SEC14-like 3 |
           chr2:9220831-9223737 REVERSE LENGTH=548
          Length = 548

 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 40/67 (59%)

Query: 7   STLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEALIKQE 66
           S ++R+ ELEEK   L+++  A    KE++L AA+ RVD LE +   TKK L E +  Q 
Sbjct: 471 SMVKRMAELEEKCRSLDNQPAAFSPEKEQILTAALSRVDELELQLAQTKKTLEETMATQH 530

Query: 67  ELMTYKD 73
            +M Y D
Sbjct: 531 VIMAYID 537


>AT2G21540.3 | Symbols: SFH3 | SEC14-like 3 | chr2:9220831-9223737
           REVERSE LENGTH=542
          Length = 542

 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 40/67 (59%)

Query: 7   STLERLGELEEKVDMLESKLNAMPHAKEELLNAAIYRVDALEAEQITTKKALHEALIKQE 66
           S ++R+ ELEEK   L+++  A    KE++L AA+ RVD LE +   TKK L E +  Q 
Sbjct: 465 SMVKRMAELEEKCRSLDNQPAAFSPEKEQILTAALSRVDELELQLAQTKKTLEETMATQH 524

Query: 67  ELMTYKD 73
            +M Y D
Sbjct: 525 VIMAYID 531