Miyakogusa Predicted Gene

Lj1g3v2126090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2126090.1 Non Chatacterized Hit- tr|I3SIH2|I3SIH2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.18,0,Aspartate/ornithine
carbamoyltransferase,Aspartate/ornithine carbamoyltransferase;
OTCASE,Ornithine/,CUFF.28568.1
         (364 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75330.1 | Symbols: OTC | ornithine carbamoyltransferase | ch...   526   e-149
AT3G20330.1 | Symbols: PYRB | PYRIMIDINE B | chr3:7090354-709190...    94   2e-19

>AT1G75330.1 | Symbols: OTC | ornithine carbamoyltransferase |
           chr1:28266457-28268383 REVERSE LENGTH=375
          Length = 375

 Score =  526 bits (1354), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 257/346 (74%), Positives = 292/346 (84%), Gaps = 8/346 (2%)

Query: 24  TLRHSTPFSVSSPP-PRLRTTISCRAVAAES-----PLTAKVGLXXXXXXXXXXXXTILK 77
           TLR  +  S+ SP  PRLR  +SC+A +  S      +  K  L            TI  
Sbjct: 31  TLRRFSAVSLPSPALPRLR--VSCQASSVTSPSSPSDVKGKSDLKDFLAIDDFDTATIKT 88

Query: 78  MLDRAIEVKALLKSGDRSFRPFEGKTMSMIFTKPSMRTRVSFETGFSLLGGHAVYLGPDD 137
           +LD+A EVKALLKSG+R++ PF+GK+MSMIF KPSMRTRVSFETGF LLGGHA+YLGP+D
Sbjct: 89  ILDKASEVKALLKSGERNYLPFKGKSMSMIFAKPSMRTRVSFETGFFLLGGHALYLGPND 148

Query: 138 IQMGKREETRDVARVLSRYNDLIMARVFAHQDILDLAKYATVPVINGLTDYNHPVQIMAD 197
           IQMGKREETRDVARVLSRYND+IMARVFAHQDILDLA Y++VPV+NGLTD+NHP QIMAD
Sbjct: 149 IQMGKREETRDVARVLSRYNDIIMARVFAHQDILDLANYSSVPVVNGLTDHNHPCQIMAD 208

Query: 198 ALTMIEHIGRVEGTKVVYVGDGNNIVHSWLLLASVIPFHFVCACPKGFEPDAKTVEKARK 257
           ALTMIEHIG+VEGTKVVYVGDGNN+VHSWL LASVIPFHFVCACPKG+EPD + V KA++
Sbjct: 209 ALTMIEHIGQVEGTKVVYVGDGNNMVHSWLELASVIPFHFVCACPKGYEPDKERVSKAKQ 268

Query: 258 AGISKIEITNDPKEAVKGADVVYSDVWASMGQKEEAAYRREVFKGFQVDKILMDIAGSKA 317
           AG+SKIEITNDPKEAV GADVVYSDVWASMGQK+EA  RR+ F+GFQVD+ LM +AG KA
Sbjct: 269 AGLSKIEITNDPKEAVIGADVVYSDVWASMGQKDEAEARRKAFQGFQVDEALMKLAGQKA 328

Query: 318 FFMHCLPAERGVEVTDEVVEAPYSIVFPQAENRMHAQNAIMLHVLG 363
           +FMHCLPAERGVEVT+ VVEAPYSIVFPQAENRMHAQNAIMLH+LG
Sbjct: 329 YFMHCLPAERGVEVTNGVVEAPYSIVFPQAENRMHAQNAIMLHLLG 374


>AT3G20330.1 | Symbols: PYRB | PYRIMIDINE B | chr3:7090354-7091904
           REVERSE LENGTH=390
          Length = 390

 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 148/331 (44%), Gaps = 22/331 (6%)

Query: 44  ISCRAVAAESPLTAKVGLXXXXXXXXXXXXTILKMLDRAIEVKALLKSGDRSFRPFEGKT 103
           + C A+ A +    K  L             +  + D A E++ + KS  +S    +G  
Sbjct: 67  VRCHAMQAGTRELKKFELSDVIEGKQFDREMLSAIFDVAREMEKIEKSSSQS-EILKGYL 125

Query: 104 MSMIFTKPSMRTRVSFETGFSLLGGHAVYL--GPDDIQMGKREETRDVARVLSRYNDLIM 161
           M+ +F +PS RTR+SFE+    LGG  +      +     K E   D  R +  Y+D+I+
Sbjct: 126 MATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIV 185

Query: 162 ARVFAHQDILDLAKYATVPVIN-GLTDYNHPVQIMADALTMIEHIGRVEGTKVVYVGD-- 218
            R F        A  A +PVIN G     HP Q + D  T+   IG+++G  V  VGD  
Sbjct: 186 MRHFESGAARKAAATANIPVINAGDGPGEHPTQALLDVYTIQSEIGKLDGISVALVGDLA 245

Query: 219 -GNNIVHSWLLLASV--IPFHFVCACPKGFEPDAKTVEKARKAGISKIEITNDPKEAVKG 275
            G  +     LLA    +  +FV       + D K  +    +G+ + E ++D  E    
Sbjct: 246 NGRTVRSLAYLLAKFKDVKIYFVSPEIVKMKDDIK--DYLTSSGV-EWEESSDLMEVASK 302

Query: 276 ADVVYSDVWASMGQKEEAAYRREVFKG----FQVDKILMDIAGSKAFFMHCLPAERGVEV 331
            DVVY     +  Q+E    R ++++     + VDK L+ +   KA  MH LP  R  E+
Sbjct: 303 CDVVYQ----TRIQRERFGERLDLYEAARGKYIVDKDLLGVMQKKAIIMHPLP--RLDEI 356

Query: 332 TDEVVEAPYSIVFPQAENRMHAQNAIMLHVL 362
           T +V   P +  F QA+N +  + A++  +L
Sbjct: 357 TADVDADPRAAYFRQAKNGLFIRMALLKLLL 387