Miyakogusa Predicted Gene

Lj1g3v2124920.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2124920.2 Non Chatacterized Hit- tr|I1KQB7|I1KQB7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45155
PE,83.22,0,seg,NULL; NUCLEOPORIN 155,NULL; NUCLEAR PORE COMPLEX
PROTEIN NUP155,Nucleoporin, Nup155-like; Nucleo,CUFF.28560.2
         (1026 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G14850.1 | Symbols: NUP155 | nucleoporin 155 | chr1:5116921-5...  1205   0.0  

>AT1G14850.1 | Symbols: NUP155 | nucleoporin 155 |
            chr1:5116921-5123259 REVERSE LENGTH=1464
          Length = 1464

 Score = 1205 bits (3117), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 648/1045 (62%), Positives = 776/1045 (74%), Gaps = 42/1045 (4%)

Query: 2    ALAGRPQNKDLSLKVEAAYYSAGTLILSDASPSTMPSLLVLNRDSSTQSSPSGNLGTGIR 61
            ++AGR QN DLS+K+E AYYS GTL+LSD+SP  M SLLV++RDSS  S    + G   R
Sbjct: 399  SVAGRTQNDDLSMKIETAYYSVGTLVLSDSSPPAMSSLLVVSRDSSVHSQAGSSSGPSSR 458

Query: 62   SSRASRESVSCLPVEGRMLSAADVLPLPDNAATMWSLYSEIEFGGYENLMESCERASGKL 121
            SSRA RE VS LP+EGRML  ADVLP PD AAT+ SLYSE+E+ G E   ES E+A GKL
Sbjct: 459  SSRALREVVSSLPIEGRMLFVADVLPSPDTAATIQSLYSELEYCGVEVSGESYEKACGKL 518

Query: 122  WARGDLSTQHILPRRRLVVFSTMGMMEIVFNRPLDILRRLLESNSPRSVLEDFFNHFGAD 181
            WAR DLSTQHILPRR++VVF+TMGMME+VFNRP+DILRRLLESNSPRS+LEDFF  FG  
Sbjct: 519  WARSDLSTQHILPRRKIVVFTTMGMMELVFNRPVDILRRLLESNSPRSLLEDFFTRFGVG 578

Query: 182  EAAAMCLLLAARIVHSENLISNVISEKAAEAFEDPGLVGMPQLEGSS-------TAGGCS 234
            EAAAMCL+LAARI++ E+LISN++++KAAEAFEDP +VGMPQ +GSS         GG S
Sbjct: 579  EAAAMCLMLAARIINFEDLISNIVADKAAEAFEDPRIVGMPQFDGSSGLSNTRTATGGFS 638

Query: 235  MGLVVQEAEPVFSSTYEGLCLCSSRLLFPLWELSVMVVKGSLGPSGTLSENGVVVCRFSV 294
            MG VVQEAEP+FS  +EGLCLC+SRLLFPLWEL VM  K S   S T+SE+GVV+CR S 
Sbjct: 639  MGQVVQEAEPIFSGAHEGLCLCTSRLLFPLWELPVMSKKTS---SDTMSEDGVVICRLST 695

Query: 295  GAMQVLELKLRSLEKFLXXXXXXXXGLYGCLAGLGDVXXXXXXXXXXXXXXXDQSMVRSL 354
             AM VLE K+RSLEKFL        GLYGC+AGLGDV               +++MVR+L
Sbjct: 696  SAMHVLESKIRSLEKFLRSRRNQRRGLYGCVAGLGDVTGSILYGTGSELGATERNMVRNL 755

Query: 355  FGAYSRNMESNSGGNTNQRESFPYSPAELASLEVRAMECIRQLLLRSGEALFLLQLLSQH 414
            FGAYS     N G + N+R+  PYSPAELA+ EVRAMECIRQLLLRS EALFLLQLLSQH
Sbjct: 756  FGAYS-----NGGESANKRQRLPYSPAELAATEVRAMECIRQLLLRSAEALFLLQLLSQH 810

Query: 415  QVTHLIQGFDANLQQALAQLTFHQLVCSEEGDRLATRLISAVMEYYTGPDGRGTVDDISR 474
             V  L+Q  DANL+QAL QLTFHQLVCSEEGD++ATRLISAVMEYYTG DGRGTVDDIS 
Sbjct: 811  HVARLVQELDANLKQALVQLTFHQLVCSEEGDQIATRLISAVMEYYTGSDGRGTVDDISP 870

Query: 475  RLREGCPSYYKESVYKFFLAVEALERAAVTVDADEKENLAREALNSLSEVPESANLRTVC 534
            RLREGCPSY+KES YKF+LAVE LERAA+T DA+EKEN+AREA + LS+VP SA+L+TVC
Sbjct: 871  RLREGCPSYFKESDYKFYLAVERLERAALTSDAEEKENVAREAFSFLSKVPGSADLQTVC 930

Query: 535  KRFEVLRFYEAVVFLPLQKALALDPEGDAYDDKIDATIRGQELAHREQCYEVIISALRSL 594
            KRFE LRFYEAVV LPLQKA ALDP GDA++D++DA+IR   LA R+QCYE+I +ALRSL
Sbjct: 931  KRFEDLRFYEAVVCLPLQKAQALDPAGDAFNDQLDASIREHALAQRKQCYEIIANALRSL 990

Query: 595  KGDTFQKEFGSPIRSAASQSALDPASRRKYISKIVQLGVQSPDSIFHEYLYQAMIDXXXX 654
                      SP+ S      LD ASR +YI +IV LGVQS D  F EYLY+AMI+    
Sbjct: 991  ---------ASPLASP----TLDEASRSQYICQIVHLGVQSTDRAFREYLYKAMIELHLE 1037

Query: 655  XXXXXXXXPDLLPFLQSAGRKPIQEVCAVTATSSPIRNLEAPMSSNHAKFYELLARYYVL 714
                    PDL+PFLQ+AG     +V AV+  SSP+ +    +SS+ AK+++LLA+YYV 
Sbjct: 1038 NELLEYGGPDLVPFLQNAGSHSESQVGAVSTGSSPLGHSGTQISSDQAKYFDLLAKYYVS 1097

Query: 715  KRQHMXXXXX--XXXXXXXXSIDGVPTLEQRCQYLSNAVLQEKNATNNDRLVSSTRSSFD 772
            KRQH+               S+   PTLE+R   LS AVLQ KNA+N+D LV S +   D
Sbjct: 1098 KRQHVLAAHVFLRLAERRAISLGDSPTLERRRDDLSQAVLQAKNASNSDGLVGSAQGVSD 1157

Query: 773  SEFLDLLEGKLAVLRFQIKIKQELEAMTSRSEVLHGTPGSVQNDLVPEGSSTADANFVNA 832
            S  LDLLEGKLAVL+FQIKI+ +LEA+ S  E       S QN  V +G S+ D N  NA
Sbjct: 1158 SGLLDLLEGKLAVLQFQIKIRDKLEAIASNFESSVAMQDSDQNGQVLDGDSSDDTNLANA 1217

Query: 833  IREKAKELSADLKSITQLYNEYAVPFELWEICLEMLYFAIHSGENDSSVVRETWARLIDQ 892
              E A E+S++LKS+TQLYNEYAVPFELWEICLEMLYFA +SG+ DSS++RETWARLIDQ
Sbjct: 1218 ANEMAMEVSSELKSVTQLYNEYAVPFELWEICLEMLYFANYSGDADSSIIRETWARLIDQ 1277

Query: 893  AISRGGVAEACSVLKRVGPRIYLGDGAVLPLDIICFHLEKAGLERLNSGVEPVGDEDVAR 952
            A+S+GG+ EAC+VLKRVG  IY GDG VLPLD++C HLE+A LER +  +E V DED+A+
Sbjct: 1278 ALSQGGIREACAVLKRVGSHIYPGDGVVLPLDVLCLHLERAALER-SERIENVRDEDIAK 1336

Query: 953  ALVSACNGAAEPVLDAYDQLLSNGAIFPSPNLRLRMLSSVLVILHEWAMSVYSQ------ 1006
            AL++AC GAAEPVL+AYD+LLSN A+ PSPNLR+R+L SVLV+L EWAMSV S       
Sbjct: 1337 ALLAACKGAAEPVLNAYDRLLSNAAVVPSPNLRIRLLRSVLVVLREWAMSVLSDRMGSSP 1396

Query: 1007 ----ITMEGEFSLEHPVA-SQGLRD 1026
                + + G F+LE+  A +QG RD
Sbjct: 1397 TRSSLILGGSFALENKAALNQGARD 1421