Miyakogusa Predicted Gene

Lj1g3v2110490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2110490.1 Non Chatacterized Hit- tr|I3SIC1|I3SIC1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.38,0,no
description,Nucleic acid-binding, OB-fold; no description,Translation
initiation factor 2, alpha ,CUFF.28550.1
         (320 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40290.1 | Symbols:  | Eukaryotic translation initiation fact...   547   e-156
AT5G05470.1 | Symbols: EIF2 ALPHA, ATEIF2-A2, EIF2-A2 | eukaryot...   514   e-146
AT2G40290.3 | Symbols:  | Eukaryotic translation initiation fact...   401   e-112
AT2G40290.2 | Symbols:  | Eukaryotic translation initiation fact...   401   e-112

>AT2G40290.1 | Symbols:  | Eukaryotic translation initiation factor
           2 subunit 1 | chr2:16829030-16830889 REVERSE LENGTH=344
          Length = 344

 Score =  547 bits (1410), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 263/312 (84%), Positives = 286/312 (91%)

Query: 2   APNLECRMYETKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXX 61
            PNLECRMYE KYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSE          
Sbjct: 5   TPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVS 64

Query: 62  XXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVAETLN 121
              KVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVAETL+
Sbjct: 65  SLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVAETLS 124

Query: 122 IDLEELYVHIGWPLYRKYGHAFEAFKIVVTDPDSVLNLLTREVKEVGPDGQEVTKVVPAV 181
           IDLE+LYV+IGWPLYR++GHAFEAFKI+VTDPDSVL  LTRE+KEVGPDGQEVTKVVPAV
Sbjct: 125 IDLEDLYVNIGWPLYRRHGHAFEAFKILVTDPDSVLGPLTREIKEVGPDGQEVTKVVPAV 184

Query: 182 SEEVKDSLVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAAGNDDCPVNIK 241
           +EEVKD+LVKNIRRRMTPQP+KIRADIE+KCFQFDGV+HIKEAM+ AEAAGN+DCPV IK
Sbjct: 185 TEEVKDALVKNIRRRMTPQPMKIRADIELKCFQFDGVVHIKEAMKNAEAAGNEDCPVKIK 244

Query: 242 LVAPPLYVLTTQTLDKEQGILVLNNAIVSCTESIEKHKGKLVVKEAARAVSERDDKVIAE 301
           LVAPPLYVLTTQTLDKEQGI +LN AI +CTE+IE HKGKLVVKE ARAVSERD+K++ E
Sbjct: 245 LVAPPLYVLTTQTLDKEQGIEILNKAIAACTETIETHKGKLVVKEGARAVSERDEKMLTE 304

Query: 302 YMAKLRQENEEV 313
           +MAKLR +NEE+
Sbjct: 305 HMAKLRLDNEEM 316


>AT5G05470.1 | Symbols: EIF2 ALPHA, ATEIF2-A2, EIF2-A2 | eukaryotic
           translation initiation factor 2 alpha subunit |
           chr5:1620579-1622214 FORWARD LENGTH=344
          Length = 344

 Score =  514 bits (1323), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 246/312 (78%), Positives = 276/312 (88%)

Query: 2   APNLECRMYETKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXX 61
           APNLECRMYE++YP+VDMAVMIQVK IADMGAYVSLLEYNNIEGMILFSE          
Sbjct: 5   APNLECRMYESRYPDVDMAVMIQVKTIADMGAYVSLLEYNNIEGMILFSELSRRRIRSIS 64

Query: 62  XXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVAETLN 121
              KVGR EPVMVLRVD+E+GYIDLSKRRVS+ED + CEERYNKSKLVHSIMRHVAET+ 
Sbjct: 65  SLIKVGRTEPVMVLRVDRERGYIDLSKRRVSDEDKEACEERYNKSKLVHSIMRHVAETVG 124

Query: 122 IDLEELYVHIGWPLYRKYGHAFEAFKIVVTDPDSVLNLLTREVKEVGPDGQEVTKVVPAV 181
           +DLEELYV+IGWPLY+K+GHAFEAFKIVVTDPDSV + LTREVKE GPDG EVTKVVPAV
Sbjct: 125 VDLEELYVNIGWPLYKKHGHAFEAFKIVVTDPDSVFDALTREVKETGPDGVEVTKVVPAV 184

Query: 182 SEEVKDSLVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAAGNDDCPVNIK 241
           SEE+KD+ +K+IRRRMTPQP+KIRADIE+KCFQFDGVLHIKEAM+KAEA G DDCPV IK
Sbjct: 185 SEELKDAFLKDIRRRMTPQPMKIRADIELKCFQFDGVLHIKEAMKKAEAVGTDDCPVKIK 244

Query: 242 LVAPPLYVLTTQTLDKEQGILVLNNAIVSCTESIEKHKGKLVVKEAARAVSERDDKVIAE 301
           LVAPPLYVLTT T  KE+GI+ LN AI +C  +IE+HKGKLVVKE ARAVSERDDK++AE
Sbjct: 245 LVAPPLYVLTTHTHYKEKGIVTLNKAIEACITAIEEHKGKLVVKEGARAVSERDDKLLAE 304

Query: 302 YMAKLRQENEEV 313
           +MAKLR +NEE+
Sbjct: 305 HMAKLRMDNEEM 316


>AT2G40290.3 | Symbols:  | Eukaryotic translation initiation factor
           2 subunit 1 | chr2:16829872-16830889 REVERSE LENGTH=241
          Length = 241

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 192/221 (86%), Positives = 204/221 (92%)

Query: 2   APNLECRMYETKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXX 61
            PNLECRMYE KYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSE          
Sbjct: 5   TPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVS 64

Query: 62  XXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVAETLN 121
              KVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVAETL+
Sbjct: 65  SLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVAETLS 124

Query: 122 IDLEELYVHIGWPLYRKYGHAFEAFKIVVTDPDSVLNLLTREVKEVGPDGQEVTKVVPAV 181
           IDLE+LYV+IGWPLYR++GHAFEAFKI+VTDPDSVL  LTRE+KEVGPDGQEVTKVVPAV
Sbjct: 125 IDLEDLYVNIGWPLYRRHGHAFEAFKILVTDPDSVLGPLTREIKEVGPDGQEVTKVVPAV 184

Query: 182 SEEVKDSLVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIK 222
           +EEVKD+LVKNIRRRMTPQP+KIRADIE+KCFQFDGV+HIK
Sbjct: 185 TEEVKDALVKNIRRRMTPQPMKIRADIELKCFQFDGVVHIK 225


>AT2G40290.2 | Symbols:  | Eukaryotic translation initiation factor
           2 subunit 1 | chr2:16829872-16830889 REVERSE LENGTH=241
          Length = 241

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 192/221 (86%), Positives = 204/221 (92%)

Query: 2   APNLECRMYETKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXX 61
            PNLECRMYE KYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSE          
Sbjct: 5   TPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVS 64

Query: 62  XXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVAETLN 121
              KVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVAETL+
Sbjct: 65  SLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVAETLS 124

Query: 122 IDLEELYVHIGWPLYRKYGHAFEAFKIVVTDPDSVLNLLTREVKEVGPDGQEVTKVVPAV 181
           IDLE+LYV+IGWPLYR++GHAFEAFKI+VTDPDSVL  LTRE+KEVGPDGQEVTKVVPAV
Sbjct: 125 IDLEDLYVNIGWPLYRRHGHAFEAFKILVTDPDSVLGPLTREIKEVGPDGQEVTKVVPAV 184

Query: 182 SEEVKDSLVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIK 222
           +EEVKD+LVKNIRRRMTPQP+KIRADIE+KCFQFDGV+HIK
Sbjct: 185 TEEVKDALVKNIRRRMTPQPMKIRADIELKCFQFDGVVHIK 225