Miyakogusa Predicted Gene

Lj1g3v2100400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2100400.1 Non Chatacterized Hit- tr|A5BDS4|A5BDS4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,61.43,8e-19,seg,NULL,CUFF.28524.1
         (270 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G28670.1 | Symbols:  | oxidoreductase, zinc-binding dehydroge...   298   4e-81

>AT3G28670.1 | Symbols:  | oxidoreductase, zinc-binding
           dehydrogenase family protein | chr3:10744183-10746983
           FORWARD LENGTH=491
          Length = 491

 Score =  298 bits (762), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 145/272 (53%), Positives = 184/272 (67%), Gaps = 5/272 (1%)

Query: 1   MVKGVVGEETRLNSLESRLTKSALPSEVGLAIGKFSSALDRVFLFDLIPTPPNDSGEPAS 60
           MVK VVGE+TRL S+E RL+ SA+P+EVGL IGK SS LDR F+FDLIPTP ND GEPA 
Sbjct: 1   MVKAVVGEDTRLTSVEDRLSHSAIPAEVGLVIGKLSSVLDRGFVFDLIPTPSNDDGEPAC 60

Query: 61  SIAHSDNKKTAAKSKTPVPDSLFIDQ---DWVAEHARHVSRMLXXXXXXXXXXXWLGDAA 117
           ++  + + K                    DWVAEHAR VSRML           W  D A
Sbjct: 61  AVLETKDDKRKPSKSKSQSSESSSLSIDSDWVAEHARQVSRMLLGGMKVVGIYVWASDIA 120

Query: 118 FKNSTITLCQTVKGVAEAAATVD--WGERLLLHISYSPRRWNCRSCSLSPNITSGSLRPC 175
           FKNST+ LCQ +K V++A   +D    E LL+HI YSPRRWNCR+C LS +ITS +LRPC
Sbjct: 121 FKNSTMILCQAMKAVSDAIRHLDPSLNEALLIHICYSPRRWNCRTCLLSSSITSSNLRPC 180

Query: 176 DFKLGKVLSSIQTFKCMHNFDLRVPIFRDSAAKYQTFSDVLRHAISVHAKELTGAKALID 235
           DFKLGKVLSS+Q F+C +NF  R+PI+ +  +  QTF+D +R  +++HAKEL  A A+ID
Sbjct: 181 DFKLGKVLSSLQRFRCSYNFSFRLPIYGEGGSSAQTFTDTIRKELAIHAKELNSANAMID 240

Query: 236 GKLVVDNEPCSSDGVHEIELLIPILSNSSVEA 267
           G LV ++EPC++DG HEIELL P + ++  EA
Sbjct: 241 GDLVHNDEPCNTDGEHEIELLFPFMKDTRAEA 272