Miyakogusa Predicted Gene
- Lj1g3v2098340.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2098340.1 Non Chatacterized Hit- tr|I1JLW5|I1JLW5_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,84.7,0,TPR-like,NULL; PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; DYW_deaminase,NULL; PEN,CUFF.28519.1
(692 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 508 e-144
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 506 e-143
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 499 e-141
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 495 e-140
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 493 e-139
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 492 e-139
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 492 e-139
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 488 e-138
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 488 e-138
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 485 e-137
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 484 e-137
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 478 e-135
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 477 e-134
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 476 e-134
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 474 e-134
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 473 e-133
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 466 e-131
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 465 e-131
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 464 e-131
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 461 e-130
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 458 e-129
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 456 e-128
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 456 e-128
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 455 e-128
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 451 e-127
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 451 e-126
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 449 e-126
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 449 e-126
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 444 e-125
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 442 e-124
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 442 e-124
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 441 e-124
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 441 e-123
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 433 e-121
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 433 e-121
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 431 e-121
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 431 e-121
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 430 e-120
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 430 e-120
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 429 e-120
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 428 e-120
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 427 e-119
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 426 e-119
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 424 e-118
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 424 e-118
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 423 e-118
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 420 e-117
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 416 e-116
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 414 e-115
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 413 e-115
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 412 e-115
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 412 e-115
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 410 e-114
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 407 e-113
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 403 e-112
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 402 e-112
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-112
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 395 e-110
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 395 e-110
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 394 e-109
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 393 e-109
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 391 e-109
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 391 e-109
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 389 e-108
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 386 e-107
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 386 e-107
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 382 e-106
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 380 e-105
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 371 e-102
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 367 e-101
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 364 e-100
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 2e-99
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 5e-99
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 6e-99
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 358 9e-99
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 4e-98
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 355 6e-98
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 7e-98
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 353 2e-97
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 351 1e-96
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 8e-96
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 8e-96
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 1e-95
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 346 3e-95
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 1e-94
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 4e-94
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 338 6e-93
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 338 7e-93
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 337 1e-92
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 336 3e-92
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 5e-92
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 333 2e-91
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 3e-91
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 2e-90
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 6e-90
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 6e-90
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 8e-90
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 327 2e-89
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 6e-89
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 7e-89
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 3e-88
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 3e-88
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 322 6e-88
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 322 7e-88
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 321 8e-88
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 2e-87
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 7e-87
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 318 1e-86
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 317 2e-86
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 313 2e-85
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 2e-85
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 3e-84
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 309 4e-84
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 5e-84
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 2e-83
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 1e-82
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 304 1e-82
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 2e-82
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 302 7e-82
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 301 8e-82
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 301 9e-82
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 2e-80
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 297 2e-80
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 2e-79
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 2e-79
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 5e-79
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 291 8e-79
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 5e-78
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 1e-77
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 8e-77
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 281 1e-75
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 280 2e-75
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 8e-75
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 278 1e-74
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 1e-74
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 7e-74
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 4e-73
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 4e-73
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 272 6e-73
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 5e-72
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 5e-71
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 5e-70
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 8e-70
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 9e-69
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 9e-69
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 9e-69
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 7e-68
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 1e-67
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 3e-67
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 4e-67
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 9e-67
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 4e-66
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 249 6e-66
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 5e-65
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 7e-63
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 8e-63
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 232 5e-61
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 231 1e-60
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 230 2e-60
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 6e-57
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 7e-57
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 5e-56
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 9e-56
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 2e-54
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 210 3e-54
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 5e-54
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 1e-52
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 3e-47
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 6e-43
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 7e-43
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 2e-42
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 2e-35
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 5e-30
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 122 8e-28
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 113 5e-25
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 2e-24
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 2e-24
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 7e-24
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 107 4e-23
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-22
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 3e-22
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 103 3e-22
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 103 5e-22
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 102 8e-22
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 6e-21
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 7e-21
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 1e-19
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 95 2e-19
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 94 4e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 6e-19
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 90 4e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 5e-18
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 6e-18
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 90 6e-18
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 90 7e-18
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 5e-17
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 84 3e-16
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 80 3e-15
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 5e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 79 1e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 5e-14
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 75 1e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 73 7e-13
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 7e-13
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 70 5e-12
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 69 8e-12
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 2e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 64 3e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 64 4e-10
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 64 4e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 64 5e-10
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 3e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 59 1e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 59 2e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 56 7e-08
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 56 9e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 1e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 54 3e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 54 4e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 7e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 7e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 508 bits (1307), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/678 (36%), Positives = 389/678 (57%), Gaps = 1/678 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS +A L+ C+ L +G+QLHA + G + LLNLY+KC +++ A+ F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
N+V W M+ + R + F QM+ E +Q+ S+L+ C LG ++
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G Q+H ++K+ F ++ S L DMY+K G++ A + KD V WT+MI GY
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+ +KAL +++M+ + D+ L + +SAC L+A G+ +HA GF +
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
NAL LYS+ G + + F+ NI ++ A+V G+ + E+AL F+ +
Sbjct: 628 FQNALVTLYSRCGKIEESYLAFEQTEAGDNI-AWNALVSGFQQSGNNEEALRVFVRMNRE 686
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
GI+ N FTF S +KA + A ++ G +H + K +D + V +AL+ MY KCG +
Sbjct: 687 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA 746
Query: 375 IQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHA 434
+ F E+ N+ +WN ++ +++HG G A+++F++M+ ++PN VT V +L CSH
Sbjct: 747 EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 806
Query: 435 GMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCS 494
G+V+ G+ YF SM+ YG+ P+ EHY C++D+L RAG L ++FI MP +P A W +
Sbjct: 807 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 866
Query: 495 FLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNM 554
L AC H + E + AA+ L++LEPE+S +VLLSN+YA ++W+ R+ +++ +
Sbjct: 867 LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGV 926
Query: 555 KKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDD 614
KK PG SW+++ N H F V D +HP EI+E L + +GYV S+L E+
Sbjct: 927 KKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQH 986
Query: 615 TLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRD 674
K+ ++ HSE++A+++ LL P PI V KNLRVC+DCH+ K++SKV+ R IIVRD
Sbjct: 987 EQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRD 1046
Query: 675 ISRFHHFSNGSCSCGDYW 692
RFHHF G+CSC DYW
Sbjct: 1047 AYRFHHFEGGACSCKDYW 1064
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/477 (29%), Positives = 246/477 (51%), Gaps = 11/477 (2%)
Query: 36 KQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRS 95
+Q+HA+++ G T + N L++LYS+ G +D A ++FD + ++ SW AMI+G ++
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 266
Query: 96 LRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLG 155
EA+ FC M G + +A SSVL AC + S++ G Q+H LV+K GF + ++
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 326
Query: 156 SNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVF 215
+ L +Y G + A +F M +D V + ++I+G + G EKA+ +K+M D +
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 216 IDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNV 275
D + L S + AC+A G+ LHA K GF I AL +LY+K D+ +A +
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 276 FQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAK 335
F ++ N+V + ++ Y +D L + F ++ I PN++T+ S++K C
Sbjct: 447 FL-ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505
Query: 336 LEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGV 395
LE G +H Q++K NF + +V S L+DMY K G D + + + +W T++
Sbjct: 506 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 565
Query: 396 FAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMP 455
+ Q+ A+ TF +M+DRG++ + V N + C+ +++G ++ + G
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHAQACVSGFSS 624
Query: 456 REEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFG----WCSFLGACKTHGDKERA 508
N ++ L R GK++E + + FE T G W + + + G+ E A
Sbjct: 625 DLPFQNALVTLYSRCGKIEE-----SYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Score = 212 bits (540), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 234/486 (48%), Gaps = 3/486 (0%)
Query: 18 AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM 77
A + ++ C + + L G+QLH +++ G T++ N L++LY G L A +F M
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 78 SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
S+R+ V++ +I G + +A++ F +M +G L+S++ AC++ G++ G
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNG 197
Q+H K GF + L ++Y+KC ++ A F E ++ VLW M+ Y
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 198 NFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGN 257
+ + +++M + + +Q+ S L C L G+ +H+ I+K F+ ++ +
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 258 ALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIE 317
L D+Y+K G + +A ++ +G +++VS+T ++ GY + + +KAL F + + GI
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAG-KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 318 PNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQL 377
+E ++ + ACA L+ G +H Q F D +ALV +Y +CG + S
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLA 648
Query: 378 FDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMV 437
F++ E ++ AWN LV F Q G A+ F M G+ N TF + +K S +
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 708
Query: 438 EDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLG 497
+ G + K G E N +I + + G + + E + + W + +
Sbjct: 709 KQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAIIN 766
Query: 498 ACKTHG 503
A HG
Sbjct: 767 AYSKHG 772
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 227/464 (48%), Gaps = 10/464 (2%)
Query: 22 LIQTCAQAK-ELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKR 80
L++ C + L +G++LH+Q+++ G L+ L + Y G+L A K+FD M +R
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 81 NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV--Q 138
+ +W MI E F +M +E T ++ S VL+AC GS+ F V Q
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG-GSVAFDVVEQ 208
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGN 198
+H ++ G + + L D+YS+ G V A +VF+ + KD W +MI G KN
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268
Query: 199 FEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNA 258
+A+ + M + + S LSAC +++ G+ LH +++K GF +T++ NA
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328
Query: 259 LTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEP 318
L LY G+++SA ++F S+ R+ V++ +++G + EKA+ F + G+EP
Sbjct: 329 LVSLYFHLGNLISAEHIF-SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 319 NEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLF 378
+ T +SL+ AC+ L G LH K F + + AL+++Y KC + ++ F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 379 DEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVE 438
E E N WN ++ + RN+ F +M + PN T+ ++LK C G +E
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 439 DGLNYFYSMDKIYGVMPREEHYNC--IIDLLGRAGKLKEVEDFI 480
G +I + Y C +ID+ + GKL D +
Sbjct: 508 LGEQIH---SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 8/200 (4%)
Query: 275 VFQSDSGCRNIVSFTAIVDGYVEMDQ--LEKALNAFIDLRNSGIEPNEFTFSSLIKAC-A 331
VF + G R SF AI Y+ D+ EK +++ + N GI PN T L++ C
Sbjct: 42 VFPTLCGTRR-ASFAAI-SVYISEDESFQEKRIDS---VENRGIRPNHQTLKWLLEGCLK 96
Query: 332 NQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNT 391
L+ G LH Q++K D + +S L D Y G + ++FDE+ WN
Sbjct: 97 TNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNK 156
Query: 392 LVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIY 451
++ A L F MV + PN TF +L+ C + D + ++
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 216
Query: 452 GVMPREEHYNCIIDLLGRAG 471
G+ N +IDL R G
Sbjct: 217 GLRDSTVVCNPLIDLYSRNG 236
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 506 bits (1303), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/672 (38%), Positives = 405/672 (60%), Gaps = 4/672 (0%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
L++ C EL GK++H L++ G F L N+Y+KC +++ A K+FDRM +R+
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
+VSW ++ G+ ++ R AL+ M E S + SVL A ++L I G ++H
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
++SGF + + + L DMY+KCG + A ++F+ M ++ V W SMID YV+N N ++
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
A++ ++KM+ + V + L AC L G+ +H + V+ G + + N+L
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380
Query: 262 LYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEF 321
+Y K ++ +A+++F R +VS+ A++ G+ + + ALN F +R+ ++P+ F
Sbjct: 381 MYCKCKEVDTAASMF-GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTF 439
Query: 322 TFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEI 381
T+ S+I A A + H +HG V++ D++ FV++ALVDMY KCG + +FD +
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499
Query: 382 ENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGL 441
+ T WN ++ + HG G+ A+E F EM +KPN VTF++++ CSH+G+VE GL
Sbjct: 500 SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGL 559
Query: 442 NYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKT 501
FY M + Y + +HY ++DLLGRAG+L E DFI MP +P + + LGAC+
Sbjct: 560 KCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI 619
Query: 502 HGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLR-KMIRDGNMKKLPGY 560
H + A+ AA +L +L P++ G HVLL+NIY WE V +R M+R G ++K PG
Sbjct: 620 HKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQG-LRKTPGC 678
Query: 561 SWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKL 620
S V+I NE H F +HP K+IY L+ L+ IK GYVP T VL +++ +KE+L
Sbjct: 679 SMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQL 737
Query: 621 LHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHH 680
L HSE++A+++ LL + G I V+KNLRVC+DCH+A KYIS VT R I+VRD+ RFHH
Sbjct: 738 LSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHH 797
Query: 681 FSNGSCSCGDYW 692
F NG+CSCGDYW
Sbjct: 798 FKNGACSCGDYW 809
Score = 232 bits (592), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 253/490 (51%), Gaps = 18/490 (3%)
Query: 20 AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK 79
A L++ C+ KEL +Q+ + + G F L++L+ + G +D A ++F+ +
Sbjct: 41 ALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQV 139
+ V + M+ GF + +AL F +MR + + + +L+ C ++ G ++
Sbjct: 98 KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 140 HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNF 199
H L+VKSGF +LF + L +MY+KC +V++A KVF+ MP +D V W +++ GY +NG
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 200 EKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNAL 259
AL K M +N+ + S L A +AL+ S GK +H ++ GF+ I AL
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 260 TDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPN 319
D+Y+K G + +A +F RN+VS+ +++D YV+ + ++A+ F + + G++P
Sbjct: 278 VDMYAKCGSLETARQLFDGMLE-RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336
Query: 320 EFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFD 379
+ + + ACA+ LE G +H V+ DR+ V ++L+ MY KC D + +F
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 380 EIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVED 439
++++ +WN ++ FAQ+G +A+ F++M R +KP+ T+V+++ +
Sbjct: 397 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE------ 450
Query: 440 GLNYFYSMDKIYGVMPRE------EHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWC 493
L+ + I+GV+ R ++D+ + G + + I M E W
Sbjct: 451 -LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM-IARLIFDMMSERHVTTWN 508
Query: 494 SFLGACKTHG 503
+ + THG
Sbjct: 509 AMIDGYGTHG 518
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 198/384 (51%), Gaps = 5/384 (1%)
Query: 19 VAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS 78
+ ++ + + +S GK++H +R G ++ L+++Y+KCG L+ A +LFD M
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298
Query: 79 KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ 138
+RN+VSW +MI + ++ +EA+ F +M EG + ++ L ACA LG ++ G
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGN 198
+H L V+ G + + ++L MY KC EV A +F ++ + V W +MI G+ +NG
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418
Query: 199 FEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNA 258
AL + +M + V D S ++A L K +H ++++ + F+ A
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478
Query: 259 LTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEP 318
L D+Y+K G ++ A +F S R++ ++ A++DGY + AL F +++ I+P
Sbjct: 479 LVDMYAKCGAIMIARLIFDMMSE-RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 537
Query: 319 NEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFDHSIQ 376
N TF S+I AC++ +E G L ++K N+ + + A+VD+ G+ G + +
Sbjct: 538 NGVTFLSVISACSHSGLVEAG-LKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWD 596
Query: 377 LFDEIE-NPNDTAWNTLVGVFAQH 399
++ P + ++G H
Sbjct: 597 FIMQMPVKPAVNVYGAMLGACQIH 620
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 1/256 (0%)
Query: 18 AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM 77
+V + CA +L +G+ +H + G + N L+++Y KC E+D A +F ++
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
Query: 78 SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
R +VSW AMI GF ++ R +AL+ F QMR+ F SV+ A A L
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNG 197
+H +V++S +F+ + L DMY+KCG + A +F+ M + W +MIDGY +G
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 198 NFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFG-KSLHAIIVKFGFEYETFIG 256
+ AL +++M + + S +SAC+ G K + + + E
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 578
Query: 257 NALTDLYSKSGDMVSA 272
A+ DL ++G + A
Sbjct: 579 GAMVDLLGRAGRLNEA 594
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 9/203 (4%)
Query: 7 FRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGE 66
R R D+ +I A+ K +H ++R F+T L+++Y+KCG
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA 488
Query: 67 LDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQA 126
+ A +FD MS+R++ +W AMI G+ + AL+ F +M+ + SV+ A
Sbjct: 489 IMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548
Query: 127 CASLGSIQFGVQVHCL-VVKSGFGCELFLG--SNLTDMYSKCGEVSDACKVFEEMPCKDE 183
C+ G ++ G++ C ++K + EL + + D+ + G +++A +MP K
Sbjct: 549 CSHSGLVEAGLK--CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPA 606
Query: 184 V-LWTSMIDG--YVKNGNF-EKA 202
V ++ +M+ KN NF EKA
Sbjct: 607 VNVYGAMLGACQIHKNVNFAEKA 629
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 499 bits (1284), Expect = e-141, Method: Compositional matrix adjust.
Identities = 255/680 (37%), Positives = 402/680 (59%), Gaps = 3/680 (0%)
Query: 14 CDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKL 73
CD ++ T + L+ G+Q+H ++ G ++N L+N+Y K + +A +
Sbjct: 313 CDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV 372
Query: 74 FDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGS- 132
FD MS+R+++SW ++I G ++ EA+ F Q+ G Q+ ++SVL+A +SL
Sbjct: 373 FDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEG 432
Query: 133 IQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDG 192
+ QVH +K + F+ + L D YS+ + +A +FE D V W +M+ G
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAG 491
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
Y ++ + K L + M D L + C L A + GK +HA +K G++ +
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR 312
++ + + D+Y K GDM +A F S + V++T ++ G +E + E+A + F +R
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSIP-VPDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 313 NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
G+ P+EFT ++L KA + LE G +H +K N DPFV ++LVDMY KCG D
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Query: 373 HSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
+ LF IE N TAWN ++ AQHG G+ ++ F +M G+KP+ VTF+ +L CS
Sbjct: 671 DAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Query: 433 HAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGW 492
H+G+V + + SM YG+ P EHY+C+ D LGRAG +K+ E+ I SM E +A +
Sbjct: 731 HSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMY 790
Query: 493 CSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDG 552
+ L AC+ GD E K A KL++LEP +S A+VLLSN+YA +W++++ R M++
Sbjct: 791 RTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGH 850
Query: 553 NMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEM 612
+KK PG+SW+++ N+ H+F V+D S+ + + IY K+ ++ IK GYVP+T+ L+++
Sbjct: 851 KVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDV 910
Query: 613 DDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIV 672
++ KE+ L+ HSE++AVA+ LL +P PI V KNLRVC DCH+A KYI+KV R I++
Sbjct: 911 EEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVL 970
Query: 673 RDISRFHHFSNGSCSCGDYW 692
RD +RFH F +G CSCGDYW
Sbjct: 971 RDANRFHRFKDGICSCGDYW 990
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 169/353 (47%), Gaps = 3/353 (0%)
Query: 89 ITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGF 148
++ + S ++ L F M Q +L + S+ G QVHC+ +K G
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 149 GCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKK 208
L + ++L +MY K + A VF+ M +D + W S+I G +NG +A+ + +
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 209 MVTDNVFIDQHVLCSTLSACTAL-KAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSG 267
++ + DQ+ + S L A ++L + S K +H +K ++F+ AL D YS++
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 268 DMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLI 327
M A +F+ + ++V++ A++ GY + K L F + G ++FT +++
Sbjct: 467 CMKEAEILFERHN--FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVF 524
Query: 328 KACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDT 387
K C + G +H +K +D D +VSS ++DMY KCG + FD I P+D
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 584
Query: 388 AWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG 440
AW T++ ++G A F++M G+ P+ T L K S +E G
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG 637
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 188/416 (45%), Gaps = 38/416 (9%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
++ + +L GK HA+++ P FL N+L+++YSKCG L YA ++FD+M R+
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRD 104
Query: 82 MVSWTAMITGFFRSLR-----FREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFG 136
+VSW +++ + +S ++A F +R + S+ LS +L+ C G +
Sbjct: 105 LVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 137 VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKN 196
H K G + F+ L ++Y K G+V + +FEEMP +D VLW M+ Y++
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224
Query: 197 GNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIG 256
G E+A+ + + ++ L L A G A VK
Sbjct: 225 GFKEEAIDLSSAFHSSGLNPNEITL--------RLLARISGDDSDAGQVKS--------- 267
Query: 257 NALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI 316
++ D S S + + G + Y+ Q L F D+ S +
Sbjct: 268 ------FANGNDASSVSEIIFRNKG----------LSEYLHSGQYSALLKCFADMVESDV 311
Query: 317 EPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQ 376
E ++ TF ++ L G +H +K D VS++L++MY K F +
Sbjct: 312 ECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFART 371
Query: 377 LFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
+FD + + +WN+++ AQ+GL A+ F +++ GLKP+ T ++LK S
Sbjct: 372 VFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/507 (20%), Positives = 213/507 (42%), Gaps = 41/507 (8%)
Query: 19 VAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS 78
++ +++ C + + + H + G F+ L+N+Y K G++ LF+ M
Sbjct: 148 LSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP 207
Query: 79 KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ 138
R++V W M+ + EA+D + G ++ L
Sbjct: 208 YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLR----------------- 250
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGN 198
L + ++ S G+V + + + + Y+ +G
Sbjct: 251 ---------------LLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQ 295
Query: 199 FEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNA 258
+ L + MV +V DQ L+ + + + G+ +H + +K G + + N+
Sbjct: 296 YSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNS 355
Query: 259 LTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEP 318
L ++Y K A VF + S R+++S+ +++ G + +A+ F+ L G++P
Sbjct: 356 LINMYCKLRKFGFARTVFDNMSE-RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKP 414
Query: 319 NEFTFSSLIKACANQAK-LEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQL 377
+++T +S++KA ++ + L +H +K N D FVS+AL+D Y + + L
Sbjct: 415 DQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEIL 474
Query: 378 FDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMV 437
F E N + AWN ++ + Q G ++ F M +G + + T + K C +
Sbjct: 475 F-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAI 533
Query: 438 EDGLN-YFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFL 496
G + Y++ Y + + I+D+ + G + + +S+P P W + +
Sbjct: 534 NQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMI 590
Query: 497 GACKTHGDKERA--KLAAYKLMKLEPE 521
C +G++ERA + +LM + P+
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMGVLPD 617
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 3/174 (1%)
Query: 7 FRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGE 66
R L D +A L + + L +G+Q+HA ++ C F+ L+++Y+KCG
Sbjct: 609 MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGS 668
Query: 67 LDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQA 126
+D A LF R+ N+ +W AM+ G + +E L F QM++ G + VL A
Sbjct: 669 IDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728
Query: 127 CASLGSIQFGVQVHCLVVKSGFGC--ELFLGSNLTDMYSKCGEVSDACKVFEEM 178
C+ G + + H + +G E+ S L D + G V A + E M
Sbjct: 729 CSHSGLVSEAYK-HMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESM 781
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 495 bits (1275), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/662 (38%), Positives = 401/662 (60%), Gaps = 8/662 (1%)
Query: 34 KGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFF 93
+G Q+H +++ G ++N L+NLY KCG + A LFD+ +++V+W +MI+G+
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 94 RSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELF 153
+ EAL F MR S+ + +SV++ CA+L ++F Q+HC VVK GF +
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 154 LGSNLTDMYSKCGEVSDACKVFEEMPCKDEVL-WTSMIDGYVKNGNFEKALIAYKKMVTD 212
+ + L YSKC + DA ++F+E+ C V+ WT+MI G+++N E+A+ + +M
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 213 NVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSA 272
V ++ L+A + +HA +VK +E + +G AL D Y K G + A
Sbjct: 392 GVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 273 SNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACA- 331
+ VF S ++IV+++A++ GY + + E A+ F +L GI+PNEFTFSS++ CA
Sbjct: 448 AKVF-SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA 506
Query: 332 NQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNT 391
A + G HG +K D VSSAL+ MY K G + + ++F + +WN+
Sbjct: 507 TNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNS 566
Query: 392 LVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIY 451
++ +AQHG A++ F EM R +K + VTF+ + C+HAG+VE+G YF M +
Sbjct: 567 MISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDC 626
Query: 452 GVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLA 511
+ P +EH +C++DL RAG+L++ I +MP + W + L AC+ H E +LA
Sbjct: 627 KIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLA 686
Query: 512 AYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHV 571
A K++ ++PE+S A+VLLSN+YA+ W++ +RK++ + N+KK PGYSW+++ N+T+
Sbjct: 687 AEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYS 746
Query: 572 FGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVA 631
F D SHP K +IY KL+ L ++K +GY P T VL ++DD KE +L HSER+A+A
Sbjct: 747 FLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIA 806
Query: 632 YSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHF-SNGSCSCGD 690
+ L+ +P G P+++ KNLRVC DCH K I+K+ ER I+VRD +RFHHF S+G CSCGD
Sbjct: 807 FGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGD 866
Query: 691 YW 692
+W
Sbjct: 867 FW 868
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/487 (30%), Positives = 248/487 (50%), Gaps = 14/487 (2%)
Query: 35 GKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFR 94
G+QLH Q I+ G L + L++ Y K K+FD M +RN+V+WT +I+G+ R
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 95 SLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFL 154
+ E L F +M+ EG + F ++ L A G G+QVH +VVK+G + +
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 155 GSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNV 214
++L ++Y KCG V A +F++ K V W SMI GY NG +AL + M + V
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 215 FIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASN 274
+ + S + C LK F + LH +VK+GF ++ I AL YSK M+ A
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 275 VFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQA 334
+F+ N+VS+TA++ G+++ D E+A++ F +++ G+ PNEFT+S ++ A +
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS 411
Query: 335 KLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVG 394
E +H QVVK N++R V +AL+D Y K G + + ++F I++ + AW+ ++
Sbjct: 412 PSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLA 467
Query: 395 VFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVM 454
+AQ G AI+ F E+ G+KPN TF ++L C+ F+ + +
Sbjct: 468 GYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG----FAIK 523
Query: 455 PREEHYNCI----IDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKL 510
R + C+ + + + G ++ E+ E W S + HG +A L
Sbjct: 524 SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQAMKA-L 581
Query: 511 AAYKLMK 517
+K MK
Sbjct: 582 DVFKEMK 588
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 210/447 (46%), Gaps = 22/447 (4%)
Query: 70 AIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACAS 129
A LFD+ R+ S+ +++ GF R R +EA F + G SSVL+ A+
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 130 LGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSM 189
L FG Q+HC +K GF ++ +G++L D Y K D KVF+EM ++ V WT++
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 190 IDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF 249
I GY +N ++ L + +M + + + L G +H ++VK G
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 250 EYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFI 309
+ + N+L +LY K G++ A +F + +++V++ +++ GY +AL F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDK-TEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 310 DLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCG 369
+R + + +E +F+S+IK CAN +L LH VVK+ F D + +AL+ Y KC
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 370 LFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLL 428
+++LF EI N +W ++ F Q+ A++ F+EM +G++PN T+ +L
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 429 KGCS-------HAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFIN 481
HA +V+ Y G ++D + GK++E +
Sbjct: 405 TALPVISPSEVHAQVVKTN----YERSSTVG--------TALLDAYVKLGKVEEAAKVFS 452
Query: 482 SMPFEPTAFGWCSFLGACKTHGDKERA 508
+ + W + L G+ E A
Sbjct: 453 GID-DKDIVAWSAMLAGYAQTGETEAA 478
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 136/264 (51%), Gaps = 1/264 (0%)
Query: 170 DACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACT 229
+A +F++ P +D + S++ G+ ++G ++A + + + +D + S L
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 230 ALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFT 289
L FG+ LH +KFGF + +G +L D Y K + VF + RN+V++T
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFD-EMKERNVVTWT 163
Query: 290 AIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF 349
++ GY ++ L F+ ++N G +PN FTF++ + A + G +H VVK
Sbjct: 164 TLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
Query: 350 NFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETF 409
D+ VS++L+++Y KCG + LFD+ E + WN+++ +A +GL A+ F
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 283
Query: 410 NEMVDRGLKPNAVTFVNLLKGCSH 433
M ++ + +F +++K C++
Sbjct: 284 YSMRLNYVRLSESSFASVIKLCAN 307
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 97/197 (49%), Gaps = 9/197 (4%)
Query: 20 AQLIQTCAQAK-ELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS 78
+ ++ CA + +GKQ H I+ +++ LL +Y+K G ++ A ++F R
Sbjct: 498 SSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR 557
Query: 79 KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ 138
++++VSW +MI+G+ + + +ALD F +M+ V AC G ++ G +
Sbjct: 558 EKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEK 617
Query: 139 VHCLVVKSGFGCELFL----GSNLTDMYSKCGEVSDACKVFEEMP-CKDEVLWTSMIDGY 193
++V+ C++ S + D+YS+ G++ A KV E MP +W +++
Sbjct: 618 YFDIMVRD---CKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAAC 674
Query: 194 VKNGNFEKALIAYKKMV 210
+ E +A +K++
Sbjct: 675 RVHKKTELGRLAAEKII 691
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 493 bits (1269), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/689 (37%), Positives = 390/689 (56%), Gaps = 2/689 (0%)
Query: 5 NLFRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKC 64
+L R H +S V+ L+ G+ +H +++ G + N LL +Y+
Sbjct: 250 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 309
Query: 65 GELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVL 124
G A +F +M ++++SW +++ F R +AL C M + G++ + +S L
Sbjct: 310 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 369
Query: 125 QACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEV 184
AC + + G +H LVV SG +G+ L MY K GE+S++ +V +MP +D V
Sbjct: 370 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV 429
Query: 185 LWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACT-ALKAFSFGKSLHAI 243
W ++I GY ++ + +KAL A++ M + V + + S LSAC GK LHA
Sbjct: 430 AWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAY 489
Query: 244 IVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEK 303
IV GFE + + N+L +Y+K GD+ S+ ++F RNI+++ A++ E+
Sbjct: 490 IVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN-RNIITWNAMLAANAHHGHGEE 548
Query: 304 ALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVD 363
L +R+ G+ ++F+FS + A A A LE G LHG VK F+ D F+ +A D
Sbjct: 549 VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAAD 608
Query: 364 MYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVT 423
MY KCG +++ N + +WN L+ +HG TF+EM++ G+KP VT
Sbjct: 609 MYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVT 668
Query: 424 FVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
FV+LL CSH G+V+ GL Y+ + + +G+ P EH C+IDLLGR+G+L E E FI+ M
Sbjct: 669 FVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKM 728
Query: 484 PFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVR 543
P +P W S L +CK HG+ +R + AA L KLEPE+ +VL SN++A +WEDV
Sbjct: 729 PMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVE 788
Query: 544 CLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVP 603
+RK + N+KK SWV + ++ FG+ D +HP+ EIY KL+ + IK GYV
Sbjct: 789 NVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVA 848
Query: 604 QTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYIS 663
T L + D+ KE L NHSER+A+AY+L+ +P G + + KNLR+CSDCHS +K++S
Sbjct: 849 DTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVS 908
Query: 664 KVTERNIIVRDISRFHHFSNGSCSCGDYW 692
+V R I++RD RFHHF G CSC DYW
Sbjct: 909 RVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 226 bits (576), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 150/545 (27%), Positives = 257/545 (47%), Gaps = 40/545 (7%)
Query: 14 CDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKL 73
C+ +++ +I +C K+ S G+Q+ Q+++ G + N L+++ G +DYA +
Sbjct: 158 CNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYI 217
Query: 74 FDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSI 133
FD+MS+R+ +SW ++ + ++ E+ F MR + + +S++L +
Sbjct: 218 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ 277
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
++G +H LVVK GF + + + L MY+ G +A VF++MP KD + W S++ +
Sbjct: 278 KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF 337
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
V +G AL M++ ++ S L+AC F G+ LH ++V G Y
Sbjct: 338 VNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ 397
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
IGNAL +Y K G+M + V R++V++ A++ GY E + +KAL AF +R
Sbjct: 398 IIGNALVSMYGKIGEMSESRRVLLQMPR-RDVVAWNALIGGYAEDEDPDKALAAFQTMRV 456
Query: 314 SGIEPNEFTFSSLIKACANQAK-LEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
G+ N T S++ AC LE G LH +V F+ D V ++L+ MY KCG
Sbjct: 457 EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 516
Query: 373 HSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
S LF+ ++N N WN ++ A HG G ++ ++M G+ + +F L +
Sbjct: 517 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA 576
Query: 433 HAGMVEDGLNY---------------------FYS----MDKIYGVMPRE-----EHYNC 462
++E+G YS + ++ ++P +N
Sbjct: 577 KLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNI 636
Query: 463 IIDLLGRAGKLKEVEDFIN---SMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMK-- 517
+I LGR G +EV + M +P + S L AC +HG LA Y ++
Sbjct: 637 LISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC-SHGGLVDKGLAYYDMIARD 695
Query: 518 --LEP 520
LEP
Sbjct: 696 FGLEP 700
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 241/507 (47%), Gaps = 9/507 (1%)
Query: 7 FRFRHKLCD------SKAVAQLIQTCAQAKEL-SKGKQLHAQLIRGGCLPCTFLTNHLLN 59
F K+CD S +A L+ C ++ + +G Q+H + + G L +++ +L+
Sbjct: 43 MEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILH 102
Query: 60 LYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFA 119
LY G + + K+F+ M RN+VSWT+++ G+ E +D + MR EG ++ +
Sbjct: 103 LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 162
Query: 120 LSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP 179
+S V+ +C L G Q+ VVKSG +L + ++L M G V A +F++M
Sbjct: 163 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 222
Query: 180 CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKS 239
+D + W S+ Y +NG+ E++ + M + ++ + + LS + +G+
Sbjct: 223 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG 282
Query: 240 LHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMD 299
+H ++VK GF+ + N L +Y+ +G V A+ VF+ ++++S+ +++ +V
Sbjct: 283 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK-QMPTKDLISWNSLMASFVNDG 341
Query: 300 QLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS 359
+ AL + +SG N TF+S + AC E G +LHG VV + + +
Sbjct: 342 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 401
Query: 360 ALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKP 419
ALV MYGK G S ++ ++ + AWN L+G +A+ A+ F M G+
Sbjct: 402 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS 461
Query: 420 NAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDF 479
N +T V++L C G + + ++ G E N +I + + G L +D
Sbjct: 462 NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL 521
Query: 480 INSMPFEPTAFGWCSFLGACKTHGDKE 506
N + W + L A HG E
Sbjct: 522 FNGLD-NRNIITWNAMLAANAHHGHGE 547
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 136/476 (28%), Positives = 235/476 (49%), Gaps = 5/476 (1%)
Query: 60 LYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFA 119
+Y+K G + A LFD M RN VSW M++G R + E ++ F +M G S F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 120 LSSVLQACASLGSI-QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEM 178
++S++ AC GS+ + GVQVH V KSG ++++ + + +Y G VS + KVFEEM
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 179 PCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGK 238
P ++ V WTS++ GY G E+ + YK M + V +++ + +S+C LK S G+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 239 SLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEM 298
+ +VK G E + + N+L + G++ A+ +F S R+ +S+ +I Y +
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE-RDTISWNSIAAAYAQN 239
Query: 299 DQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS 358
+E++ F +R E N T S+L+ + + G +HG VVK FD V
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 359 SALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLK 418
+ L+ MY G + +F ++ + +WN+L+ F G +A+ M+ G
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 419 PNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVED 478
N VTF + L C E G + + + G+ + N ++ + G+ G++ E
Sbjct: 360 VNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 479 FINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYA 534
+ MP W + +G D ++A LAA++ M++E +S ++S + A
Sbjct: 419 VLLQMP-RRDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGVSSNYITVVSVLSA 472
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 492 bits (1266), Expect = e-139, Method: Compositional matrix adjust.
Identities = 266/725 (36%), Positives = 406/725 (56%), Gaps = 68/725 (9%)
Query: 35 GKQLHA-QLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFF 93
G LHA +L L F N +L+ YSK G++D + FD++ +R+ VSWT MI G+
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 94 RSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELF 153
++ +A+ M EG +QF L++VL + A+ ++ G +VH +VK G +
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 154 LGSNLTDMYSKCGE------------VSD-------------------ACKVFEEMPCKD 182
+ ++L +MY+KCG+ V D A FE+M +D
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 183 EVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVF-IDQHVLCSTLSACTALKAFSFGKSLH 241
V W SMI G+ + G +AL + KM+ D++ D+ L S LSAC L+ GK +H
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 242 AIIVKFGFEYETFIGNALTDLYS---------------------------------KSGD 268
+ IV GF+ + NAL +YS K GD
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 269 MVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIK 328
M A N+F S R++V++TA++ GY + +A+N F + G PN +T ++++
Sbjct: 363 MNQAKNIFVSLKD-RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLS 421
Query: 329 ACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDT- 387
++ A L HG +HG VK VS+AL+ MY K G + + FD I DT
Sbjct: 422 VASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTV 481
Query: 388 AWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSM 447
+W +++ AQHG A+E F M+ GL+P+ +T+V + C+HAG+V G YF M
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMM 541
Query: 448 DKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKER 507
+ ++P HY C++DL GRAG L+E ++FI MP EP W S L AC+ H + +
Sbjct: 542 KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDL 601
Query: 508 AKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGN 567
K+AA +L+ LEPENSGA+ L+N+Y+ +WE+ +RK ++DG +KK G+SW+++ +
Sbjct: 602 GKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKH 661
Query: 568 ETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSER 627
+ HVFGVED +HP K EIY + + D+IK +GYVP T SVL ++++ +KE++L +HSE+
Sbjct: 662 KVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEK 721
Query: 628 IAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCS 687
+A+A+ L+ +P + + KNLRVC+DCH+A K+ISK+ R IIVRD +RFHHF +G CS
Sbjct: 722 LAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCS 781
Query: 688 CGDYW 692
C DYW
Sbjct: 782 CRDYW 786
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 214/464 (46%), Gaps = 78/464 (16%)
Query: 18 AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKC------------- 64
+ ++ + A + + GK++H+ +++ G ++N LLN+Y+KC
Sbjct: 148 TLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM 207
Query: 65 ------------------GELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFC 106
G++D A+ F++M++R++V+W +MI+GF + ALD F
Sbjct: 208 VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFS 267
Query: 107 QM-RAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKC 165
+M R + +F L+SVL ACA+L + G Q+H +V +GF + + L MYS+C
Sbjct: 268 KMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRC 327
Query: 166 GEVSDACKVFEEMPCK---------------------------------DEVLWTSMIDG 192
G V A ++ E+ K D V WT+MI G
Sbjct: 328 GGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVG 387
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
Y ++G++ +A+ ++ MV + + L + LS ++L + S GK +H VK G Y
Sbjct: 388 YEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS 447
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR 312
+ NAL +Y+K+G++ SAS F R+ VS+T+++ + E+AL F +
Sbjct: 448 VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
Query: 313 NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS-----ALVDMYGK 367
G+ P+ T+ + AC + + G Q D D + + +VD++G+
Sbjct: 508 MEGLRPDHITYVGVFSACTHAGLVNQGR----QYFDMMKDVDKIIPTLSHYACMVDLFGR 563
Query: 368 CGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQH---GLGRNAIE 407
GL + + +++ P+ W +L+ H LG+ A E
Sbjct: 564 AGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAE 607
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 213/508 (41%), Gaps = 111/508 (21%)
Query: 118 FALSSVLQACASL-------GSIQFGVQ-VHCLVVKSGFGCELFLGSNLTDMYSKC---- 165
+LS++L+ C +L + +F Q VHC V+KSG ++L +NL ++YSK
Sbjct: 7 LSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYAL 66
Query: 166 ---------------------------GEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGN 198
G++ C+ F+++P +D V WT+MI GY G
Sbjct: 67 HARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQ 126
Query: 199 FEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNA 258
+ KA+ MV + + Q L + L++ A + GK +H+ IVK G + N+
Sbjct: 127 YHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNS 186
Query: 259 LTDLYSKSGDMVSASNVF----------------------QSDSGC--------RNIVSF 288
L ++Y+K GD + A VF Q D R+IV++
Sbjct: 187 LLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTW 246
Query: 289 TAIVDGYVEMDQLEKALNAFID-LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVV 347
+++ G+ + +AL+ F LR+S + P+ FT +S++ ACAN KL G +H +V
Sbjct: 247 NSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIV 306
Query: 348 KFNFDRDPFVSSALVDMYGKCG------------------------LFDHSIQL------ 377
FD V +AL+ MY +CG L D I+L
Sbjct: 307 TTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQA 366
Query: 378 ---FDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHA 434
F +++ + AW ++ + QHG AI F MV G +PN+ T +L S
Sbjct: 367 KNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSL 426
Query: 435 GMVEDGLNYFYSMDK---IYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFG 491
+ G S K IY V N +I + +AG + + + E
Sbjct: 427 ASLSHGKQIHGSAVKSGEIYSVSVS----NALITMYAKAGNITSASRAFDLIRCERDTVS 482
Query: 492 WCSFLGACKTHGDKERAKLAAYKLMKLE 519
W S + A HG E A L ++ M +E
Sbjct: 483 WTSMIIALAQHGHAEEA-LELFETMLME 509
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 492 bits (1266), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/719 (36%), Positives = 396/719 (55%), Gaps = 63/719 (8%)
Query: 36 KQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRS 95
K +H +IR P TFL N++++ Y+ YA ++FDR+ + N+ SW ++ + ++
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 96 LRFREALDTF--------------------------------CQMRAEGETASQFALSSV 123
E TF MR ++ L ++
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 124 LQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEM----- 178
L+ +S G + G Q+H V+K GF L +GS L MY+ G +SDA KVF +
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 179 -----------PC--------------KDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDN 213
C KD V W +MI G +NG ++A+ +++M
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 214 VFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSAS 273
+ +DQ+ S L AC L A + GK +HA I++ F+ ++G+AL D+Y K + A
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325
Query: 274 NVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQ 333
VF +N+VS+TA+V GY + + E+A+ F+D++ SGI+P+ +T I ACAN
Sbjct: 326 TVFDRMKQ-KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384
Query: 334 AKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLV 393
+ LE GS HG+ + VS++LV +YGKCG D S +LF+E+ + +W +V
Sbjct: 385 SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMV 444
Query: 394 GVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGV 453
+AQ G I+ F++MV GLKP+ VT ++ CS AG+VE G YF M YG+
Sbjct: 445 SAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGI 504
Query: 454 MPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAY 513
+P HY+C+IDL R+G+L+E FIN MPF P A GW + L AC+ G+ E K AA
Sbjct: 505 VPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAE 564
Query: 514 KLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFG 573
L++L+P + + LLS+IYA + +W+ V LR+ +R+ N+KK PG SW+ + H F
Sbjct: 565 SLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFS 624
Query: 574 VEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYS 633
+D S P +IY KL+ L ++I GY P T V ++++ +K K+L+ HSER+A+A+
Sbjct: 625 ADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFG 684
Query: 634 LLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
L+ P G+PI V KNLRVC DCH+A K+IS VT R I+VRD RFH F +G+CSCGD+W
Sbjct: 685 LIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 174/371 (46%), Gaps = 35/371 (9%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D ++ C +++GKQ+HA +IR ++ + L+++Y KC L YA +F
Sbjct: 269 DQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVF 328
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
DRM ++N+VSWTAM+ G+ ++ R EA+ F M+ G + L + ACA++ S++
Sbjct: 329 DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLE 388
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G Q H + SG + + ++L +Y KCG++ D+ ++F EM +D V WT+M+ Y
Sbjct: 389 EGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYA 448
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+ G + + + KMV + D L +SAC+ A +V+ G Y
Sbjct: 449 QFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS-----------RAGLVEKGQRYFKL 497
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
M S + S I ++ ++D + +LE+A+ FI+
Sbjct: 498 --------------MTSEYGIVPS------IGHYSCMIDLFSRSGRLEEAMR-FIN--GM 534
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
P+ +++L+ AC N+ LE G +++ + P + L +Y G +D
Sbjct: 535 PFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELD-PHHPAGYTLLSSIYASKGKWDSV 593
Query: 375 IQLFDEIENPN 385
QL + N
Sbjct: 594 AQLRRGMREKN 604
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 190/444 (42%), Gaps = 66/444 (14%)
Query: 124 LQACASLGS---IQFGVQVHCLVVKSGFGCELFLGSNLTD-------------------- 160
++ C LG+ ++ +H ++++ E FL +N+
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 161 -----------MYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKM 209
YSK G +S+ FE++P +D V W +I+GY +G A+ AY M
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 210 VTD-NVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGD 268
+ D + + + L + L ++ S GK +H ++K GFE +G+ L +Y+ G
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 269 MVSASNVF----------------------------QSDSGC-RNIVSFTAIVDGYVEMD 299
+ A VF Q G ++ VS+ A++ G +
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 300 QLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS 359
++A+ F +++ G++ +++ F S++ AC + G +H +++ NF +V S
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 360 ALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKP 419
AL+DMY KC ++ +FD ++ N +W +V + Q G A++ F +M G+ P
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 420 NAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDF 479
+ T + C++ +E+G + F+ G++ N ++ L G+ G + +
Sbjct: 370 DHYTLGQAISACANVSSLEEG-SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 480 INSMPFEPTAFGWCSFLGACKTHG 503
N M A W + + A G
Sbjct: 429 FNEMNVR-DAVSWTAMVSAYAQFG 451
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 488 bits (1256), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/683 (37%), Positives = 389/683 (56%), Gaps = 4/683 (0%)
Query: 13 LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLT--NHLLNLYSKCGELDYA 70
L D L+ C A + Q+HA ++ G FLT N LL Y + LD A
Sbjct: 144 LPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLA 203
Query: 71 IKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
LF+ + +++ V++ +ITG+ + + E++ F +MR G S F S VL+A L
Sbjct: 204 CVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGL 263
Query: 131 GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMI 190
G Q+H L V +GF + +G+ + D YSK V + +F+EMP D V + +I
Sbjct: 264 HDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVI 323
Query: 191 DGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFE 250
Y + +E +L +++M + LS L + G+ LH + +
Sbjct: 324 SSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATAD 383
Query: 251 YETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID 310
+GN+L D+Y+K A +F+S R VS+TA++ GYV+ L F
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAELIFKSLPQ-RTTVSWTALISGYVQKGLHGAGLKLFTK 442
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGL 370
+R S + ++ TF++++KA A+ A L G LH +++ + F S LVDMY KCG
Sbjct: 443 MRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGS 502
Query: 371 FDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKG 430
++Q+F+E+ + N +WN L+ A +G G AI F +M++ GL+P++V+ + +L
Sbjct: 503 IKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTA 562
Query: 431 CSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAF 490
CSH G VE G YF +M IYG+ P+++HY C++DLLGR G+ E E ++ MPFEP
Sbjct: 563 CSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEI 622
Query: 491 GWCSFLGACKTHGDKERAKLAAYKLMKLEP-ENSGAHVLLSNIYAKERQWEDVRCLRKMI 549
W S L AC+ H ++ A+ AA KL +E ++ A+V +SNIYA +WE VR ++K +
Sbjct: 623 MWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAM 682
Query: 550 RDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVL 609
R+ +KK+P YSWV++ ++ HVF D +HP EI K++ L +I+ GY P T SV+
Sbjct: 683 RERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVV 742
Query: 610 IEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERN 669
++D+ +K + L HSER+AVA++L+ +P G PI+V KNLR C DCH+A K ISK+ +R
Sbjct: 743 QDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKRE 802
Query: 670 IIVRDISRFHHFSNGSCSCGDYW 692
I VRD SRFHHFS G CSCGDYW
Sbjct: 803 ITVRDTSRFHHFSEGVCSCGDYW 825
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 230/489 (47%), Gaps = 31/489 (6%)
Query: 51 TFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQM-R 109
T TN +++ + K G++ A LFD M R +V+WT ++ + R+ F EA F QM R
Sbjct: 79 TVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCR 138
Query: 110 AEGET-ASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLG-SN-LTDMYSKCG 166
+ T +++L C QVH VK GF FL SN L Y +
Sbjct: 139 SSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVR 198
Query: 167 EVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLS 226
+ AC +FEE+P KD V + ++I GY K+G + +++ + KM L
Sbjct: 199 RLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLK 258
Query: 227 ACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIV 286
A L F+ G+ LHA+ V GF + +GN + D YSK D V + + + + V
Sbjct: 259 AVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKH-DRVLETRMLFDEMPELDFV 317
Query: 287 SFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQV 346
S+ ++ Y + DQ E +L+ F +++ G + F F++++ AN + L+ G LH Q
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 347 VKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAI 406
+ D V ++LVDMY KC +F+ + +F + +W L+ + Q GL +
Sbjct: 378 LLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGL 437
Query: 407 ETFNEMVDRGLKPNAVTFVNLLKGCS-----------HAGMVEDGLNYFYSMDKIYGVMP 455
+ F +M L+ + TF +LK + HA ++ G +++ ++
Sbjct: 438 KLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG-----NLENVFS--- 489
Query: 456 REEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKL 515
+ ++D+ + G +K+ MP + A W + + A +GD E A A K+
Sbjct: 490 ----GSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKM 544
Query: 516 MK--LEPEN 522
++ L+P++
Sbjct: 545 IESGLQPDS 553
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 488 bits (1256), Expect = e-138, Method: Compositional matrix adjust.
Identities = 266/717 (37%), Positives = 409/717 (57%), Gaps = 39/717 (5%)
Query: 13 LCDSKA-VAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAI 71
+ SKA + LI+ + K S+ KQLHAQ IR L T + ++++Y+ L A+
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEAL 59
Query: 72 KLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLG 131
LF + +++W ++I F F +AL +F +MRA G SVL++C +
Sbjct: 60 LLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMM 119
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSK---------CGEVSDAC---------- 172
++FG VH +V+ G C+L+ G+ L +MY+K G V D
Sbjct: 120 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 179
Query: 173 -----------------KVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVF 215
+VFE MP KD V + ++I GY ++G +E AL ++M T ++
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK 239
Query: 216 IDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNV 275
D L S L + GK +H +++ G + + +IG++L D+Y+KS + + V
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 276 FQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAK 335
F S CR+ +S+ ++V GYV+ + +AL F + + ++P FSS+I ACA+ A
Sbjct: 300 F-SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLAT 358
Query: 336 LEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGV 395
L G LHG V++ F + F++SALVDMY KCG + ++FD + ++ +W ++
Sbjct: 359 LHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMG 418
Query: 396 FAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMP 455
A HG G A+ F EM +G+KPN V FV +L CSH G+V++ YF SM K+YG+
Sbjct: 419 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 478
Query: 456 REEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKL 515
EHY + DLLGRAGKL+E +FI+ M EPT W + L +C H + E A+ A K+
Sbjct: 479 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 538
Query: 516 MKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVE 575
++ EN GA+VL+ N+YA +W+++ LR +R ++K P SW+++ N+TH F
Sbjct: 539 FTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSG 598
Query: 576 DWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLL 635
D SHP +I E L ++++Q++ GYV T VL ++D+ K +LL HSER+AVA+ ++
Sbjct: 599 DRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGII 658
Query: 636 VSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
+ G I V KN+R+C+DCH A K+ISK+TER IIVRD SRFHHF+ G+CSCGDYW
Sbjct: 659 NTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 485 bits (1248), Expect = e-137, Method: Compositional matrix adjust.
Identities = 256/683 (37%), Positives = 389/683 (56%), Gaps = 4/683 (0%)
Query: 13 LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRG-GCLPCTFLTNHLLNLYSKCGELDYAI 71
L + A+ L++ A + G+ +HA++++ P FL N+L+N+YSK + A
Sbjct: 3 LLSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESAR 62
Query: 72 KLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLG 131
+ RN+VSWT++I+G ++ F AL F +MR EG + F +A ASL
Sbjct: 63 LVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLR 122
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMID 191
G Q+H L VK G ++F+G + DMY K DA K+F+E+P ++ W + I
Sbjct: 123 LPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFIS 182
Query: 192 GYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEY 251
V +G +A+ A+ + + + C+ L+AC+ + G LH ++++ GF+
Sbjct: 183 NSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT 242
Query: 252 ETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL 311
+ + N L D Y K + S+ +F ++ G +N VS+ ++V YV+ + EKA ++
Sbjct: 243 DVSVCNGLIDFYGKCKQIRSSEIIF-TEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRS 301
Query: 312 RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLF 371
R +E ++F SS++ ACA A LE G +H VK +R FV SALVDMYGKCG
Sbjct: 302 RKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCI 361
Query: 372 DHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGL--KPNAVTFVNLLK 429
+ S Q FDE+ N N+L+G +A G A+ F EM RG PN +TFV+LL
Sbjct: 362 EDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLS 421
Query: 430 GCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTA 489
CS AG VE+G+ F SM YG+ P EHY+CI+D+LGRAG ++ +FI MP +PT
Sbjct: 422 ACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTI 481
Query: 490 FGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMI 549
W + AC+ HG + LAA L KL+P++SG HVLLSN +A +W + +R+ +
Sbjct: 482 SVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEL 541
Query: 550 RDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVL 609
+ +KK GYSW+ + N+ H F +D SH KEI L L ++++ GY P + L
Sbjct: 542 KGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSL 601
Query: 610 IEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERN 669
++++ K + +HSE++A+A+ LL P+ PI + KNLR+C DCHS FK++S +R
Sbjct: 602 YDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKRE 661
Query: 670 IIVRDISRFHHFSNGSCSCGDYW 692
IIVRD +RFH F +G CSC DYW
Sbjct: 662 IIVRDNNRFHRFKDGICSCKDYW 684
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 484 bits (1246), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/737 (36%), Positives = 397/737 (53%), Gaps = 50/737 (6%)
Query: 6 LFRFRHKLC---DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYS 62
LF H L D+ + + C + + G+ HA + G + F+ N L+ +YS
Sbjct: 114 LFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYS 173
Query: 63 KCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAE-GETASQFALS 121
+C L A K+FD MS ++VSW ++I + + + + AL+ F +M E G L
Sbjct: 174 RCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLV 233
Query: 122 SVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK 181
+VL CASLG+ G Q+HC V S +F+G+ L DMY+KCG + +A VF M K
Sbjct: 234 NVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK 293
Query: 182 DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFID------------------------ 217
D V W +M+ GY + G FE A+ ++KM + + +D
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 218 -----------QHVLCSTLSACTALKAFSFGKSLHAIIVKF-------GFEYETFIGNAL 259
+ L S LS C ++ A GK +H +K+ G E + N L
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQL 413
Query: 260 TDLYSKSGDMVSASNVFQSDSGC-RNIVSFTAIVDGYVEMDQLEKALNAFIDL--RNSGI 316
D+Y+K + +A +F S S R++V++T ++ GY + KAL ++ +
Sbjct: 414 IDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT 473
Query: 317 EPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDP-FVSSALVDMYGKCGLFDHSI 375
PN FT S + ACA+ A L G +H ++ + P FVS+ L+DMY KCG +
Sbjct: 474 RPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDAR 533
Query: 376 QLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAG 435
+FD + N+ W +L+ + HG G A+ F+EM G K + VT + +L CSH+G
Sbjct: 534 LVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSG 593
Query: 436 MVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSF 495
M++ G+ YF M ++GV P EHY C++DLLGRAG+L I MP EP W +F
Sbjct: 594 MIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAF 653
Query: 496 LGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMK 555
L C+ HG E + AA K+ +L + G++ LLSN+YA +W+DV +R ++R +K
Sbjct: 654 LSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVK 713
Query: 556 KLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDT 615
K PG SWV+ T F V D +HP KEIY+ L + +IK +GYVP+T L ++DD
Sbjct: 714 KRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDE 773
Query: 616 LKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDI 675
K+ LL HSE++A+AY +L +P G I + KNLRVC DCH+AF Y+S++ + +II+RD
Sbjct: 774 EKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDS 833
Query: 676 SRFHHFSNGSCSCGDYW 692
SRFHHF NGSCSC YW
Sbjct: 834 SRFHHFKNGSCSCKGYW 850
Score = 209 bits (531), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 150/532 (28%), Positives = 242/532 (45%), Gaps = 56/532 (10%)
Query: 28 QAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM--SKRNMVSW 85
+ K +S+ K +H +L+ G L LT+HL++ Y G L +A+ L R S + W
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLN-LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHW 95
Query: 86 TAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVK 145
++I + + + L F M + T + V +AC + S++ G H L +
Sbjct: 96 NSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 146 SGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIA 205
+GF +F+G+ L MYS+C +SDA KVF+EM D V W S+I+ Y K G + AL
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215
Query: 206 YKKMVTD-NVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYS 264
+ +M + D L + L C +L S GK LH V F+GN L D+Y+
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 265 KSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR------------ 312
K G M A+ VF S+ +++VS+ A+V GY ++ + E A+ F ++
Sbjct: 276 KCGMMDEANTVF-SNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 313 -----------------------NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF 349
+SGI+PNE T S++ CA+ L HG +H +K+
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 350 NFD-------RDPFVSSALVDMYGKCGLFDHSIQLFDEIENPND---TAWNTLVGVFAQH 399
D + V + L+DMY KC D + +FD + +P + W ++G ++QH
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL-SPKERDVVTWTVMIGGYSQH 453
Query: 400 GLGRNAIETFNEMV--DRGLKPNAVTFVNLLKGCSHAGMVEDGLN-YFYSMDKIYGVMPR 456
G A+E +EM D +PNA T L C+ + G + Y++ +P
Sbjct: 454 GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPL 513
Query: 457 EEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERA 508
NC+ID+ + G + + ++M W S + HG E A
Sbjct: 514 FVS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEA 563
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 478 bits (1230), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/676 (37%), Positives = 385/676 (56%), Gaps = 5/676 (0%)
Query: 21 QLIQTCAQAKELSKGKQLHAQLI---RGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM 77
+L++ CA + L G+ +HA LI + + N L+NLY KC E A KLFD M
Sbjct: 36 ELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLM 95
Query: 78 SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET-ASQFALSSVLQACASLGSIQFG 136
+RN+VSW AM+ G+ S E L F M GE+ ++F + V ++C++ G I+ G
Sbjct: 96 PERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEG 155
Query: 137 VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKN 196
Q H +K G F+ + L MYS C +A +V +++P D +++S + GY++
Sbjct: 156 KQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLEC 215
Query: 197 GNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIG 256
G F++ L +K ++ + S+L + L+ + +H+ +V+FGF E
Sbjct: 216 GAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEAC 275
Query: 257 NALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI 316
AL ++Y K G ++ A VF D+ +NI T I+D Y + E+ALN F + +
Sbjct: 276 GALINMYGKCGKVLYAQRVFD-DTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEV 334
Query: 317 EPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQ 376
PNE+TF+ L+ + A + L+ G LLHG V+K + V +ALV+MY K G + + +
Sbjct: 335 PPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARK 394
Query: 377 LFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGM 436
F + + WNT++ + HGLGR A+E F+ M+ G PN +TF+ +L+ CSH G
Sbjct: 395 AFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGF 454
Query: 437 VEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFL 496
VE GL+YF + K + V P +HY CI+ LL +AG K+ EDF+ + P E W + L
Sbjct: 455 VEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLL 514
Query: 497 GACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKK 556
AC + K A ++ P +SG +VLLSNI+AK R+WE V +R ++ + +KK
Sbjct: 515 NACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKK 574
Query: 557 LPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTL 616
PG SW+ I N+THVF ED HP IY K+ ++ +IK +GY P ++D+
Sbjct: 575 EPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQ 634
Query: 617 KEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDIS 676
+E L HSE++AVAY L+ +P P+ V KN+R+C DCHSA K ISK+++R I++RD +
Sbjct: 635 REDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSN 694
Query: 677 RFHHFSNGSCSCGDYW 692
RFHHF +G CSC DYW
Sbjct: 695 RFHHFLDGQCSCCDYW 710
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 3/179 (1%)
Query: 20 AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK 79
A L+ + A+ L +G LH +++ G + N L+N+Y+K G ++ A K F M+
Sbjct: 342 AILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTF 401
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ- 138
R++V+W MI+G REAL+ F +M GE ++ VLQAC+ +G ++ G+
Sbjct: 402 RDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHY 461
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMIDG-YVK 195
+ L+ K ++ + + + SK G DA P + D V W ++++ YV+
Sbjct: 462 FNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVR 520
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 5/167 (2%)
Query: 323 FSSLIKACANQAKLEHGSLLHGQVVKFNFD---RDPFVSSALVDMYGKCGLFDHSIQLFD 379
+ L+K CAN + L G +H ++ N D + ++L+++Y KC + +LFD
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 380 EIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRG-LKPNAVTFVNLLKGCSHAGMVE 438
+ N +W ++ + G ++ F M G +PN + K CS++G +E
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 439 DGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPF 485
+G + K YG++ E N ++ + E ++ +P+
Sbjct: 154 EGKQFHGCFLK-YGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPY 199
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 477 bits (1228), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/681 (36%), Positives = 384/681 (56%), Gaps = 2/681 (0%)
Query: 5 NLFRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKC 64
+L R H +S V+ L+ G+ +H +++ G + N LL +Y+
Sbjct: 233 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 292
Query: 65 GELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVL 124
G A +F +M ++++SW +++ F R +AL C M + G++ + +S L
Sbjct: 293 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 352
Query: 125 QACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEV 184
AC + + G +H LVV SG +G+ L MY K GE+S++ +V +MP +D V
Sbjct: 353 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV 412
Query: 185 LWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACT-ALKAFSFGKSLHAI 243
W ++I GY ++ + +KAL A++ M + V + + S LSAC GK LHA
Sbjct: 413 AWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAY 472
Query: 244 IVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEK 303
IV GFE + + N+L +Y+K GD+ S+ ++F RNI+++ A++ E+
Sbjct: 473 IVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN-RNIITWNAMLAANAHHGHGEE 531
Query: 304 ALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVD 363
L +R+ G+ ++F+FS + A A A LE G LHG VK F+ D F+ +A D
Sbjct: 532 VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAAD 591
Query: 364 MYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVT 423
MY KCG +++ N + +WN L+ +HG TF+EM++ G+KP VT
Sbjct: 592 MYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVT 651
Query: 424 FVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
FV+LL CSH G+V+ GL Y+ + + +G+ P EH C+IDLLGR+G+L E E FI+ M
Sbjct: 652 FVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKM 711
Query: 484 PFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVR 543
P +P W S L +CK HG+ +R + AA L KLEPE+ +VL SN++A +WEDV
Sbjct: 712 PMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVE 771
Query: 544 CLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVP 603
+RK + N+KK SWV + ++ FG+ D +HP+ EIY KL+ + IK GYV
Sbjct: 772 NVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVA 831
Query: 604 QTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYIS 663
T L + D+ KE L NHSER+A+AY+L+ +P G + + KNLR+CSDCHS +K++S
Sbjct: 832 DTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVS 891
Query: 664 KVTERNIIVRDISRFHHFSNG 684
+V R I++RD RFHHF G
Sbjct: 892 RVIGRRIVLRDQYRFHHFERG 912
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 150/545 (27%), Positives = 257/545 (47%), Gaps = 40/545 (7%)
Query: 14 CDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKL 73
C+ +++ +I +C K+ S G+Q+ Q+++ G + N L+++ G +DYA +
Sbjct: 141 CNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYI 200
Query: 74 FDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSI 133
FD+MS+R+ +SW ++ + ++ E+ F MR + + +S++L +
Sbjct: 201 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ 260
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
++G +H LVVK GF + + + L MY+ G +A VF++MP KD + W S++ +
Sbjct: 261 KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF 320
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
V +G AL M++ ++ S L+AC F G+ LH ++V G Y
Sbjct: 321 VNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ 380
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
IGNAL +Y K G+M + V R++V++ A++ GY E + +KAL AF +R
Sbjct: 381 IIGNALVSMYGKIGEMSESRRVLLQMPR-RDVVAWNALIGGYAEDEDPDKALAAFQTMRV 439
Query: 314 SGIEPNEFTFSSLIKACANQAK-LEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
G+ N T S++ AC LE G LH +V F+ D V ++L+ MY KCG
Sbjct: 440 EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 499
Query: 373 HSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
S LF+ ++N N WN ++ A HG G ++ ++M G+ + +F L +
Sbjct: 500 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA 559
Query: 433 HAGMVEDGLNY---------------------FYS----MDKIYGVMPRE-----EHYNC 462
++E+G YS + ++ ++P +N
Sbjct: 560 KLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNI 619
Query: 463 IIDLLGRAGKLKEVEDFIN---SMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMK-- 517
+I LGR G +EV + M +P + S L AC +HG LA Y ++
Sbjct: 620 LISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC-SHGGLVDKGLAYYDMIARD 678
Query: 518 --LEP 520
LEP
Sbjct: 679 FGLEP 683
Score = 205 bits (522), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 241/507 (47%), Gaps = 9/507 (1%)
Query: 7 FRFRHKLCD------SKAVAQLIQTCAQAKEL-SKGKQLHAQLIRGGCLPCTFLTNHLLN 59
F K+CD S +A L+ C ++ + +G Q+H + + G L +++ +L+
Sbjct: 26 MEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILH 85
Query: 60 LYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFA 119
LY G + + K+F+ M RN+VSWT+++ G+ E +D + MR EG ++ +
Sbjct: 86 LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 145
Query: 120 LSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP 179
+S V+ +C L G Q+ VVKSG +L + ++L M G V A +F++M
Sbjct: 146 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 205
Query: 180 CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKS 239
+D + W S+ Y +NG+ E++ + M + ++ + + LS + +G+
Sbjct: 206 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG 265
Query: 240 LHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMD 299
+H ++VK GF+ + N L +Y+ +G V A+ VF+ ++++S+ +++ +V
Sbjct: 266 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMASFVNDG 324
Query: 300 QLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS 359
+ AL + +SG N TF+S + AC E G +LHG VV + + +
Sbjct: 325 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 384
Query: 360 ALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKP 419
ALV MYGK G S ++ ++ + AWN L+G +A+ A+ F M G+
Sbjct: 385 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS 444
Query: 420 NAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDF 479
N +T V++L C G + + ++ G E N +I + + G L +D
Sbjct: 445 NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL 504
Query: 480 INSMPFEPTAFGWCSFLGACKTHGDKE 506
N + W + L A HG E
Sbjct: 505 FNGLD-NRNIITWNAMLAANAHHGHGE 530
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 225/459 (49%), Gaps = 5/459 (1%)
Query: 77 MSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSI-QF 135
M RN VSW M++G R + E ++ F +M G S F ++S++ AC GS+ +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVK 195
GVQVH V KSG ++++ + + +Y G VS + KVFEEMP ++ V WTS++ GY
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 196 NGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFI 255
G E+ + YK M + V +++ + +S+C LK S G+ + +VK G E + +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 256 GNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSG 315
N+L + G++ A+ +F S R+ +S+ +I Y + +E++ F +R
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSE-RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239
Query: 316 IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSI 375
E N T S+L+ + + G +HG VVK FD V + L+ MY G +
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 299
Query: 376 QLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAG 435
+F ++ + +WN+L+ F G +A+ M+ G N VTF + L C
Sbjct: 300 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 359
Query: 436 MVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSF 495
E G + + + G+ + N ++ + G+ G++ E + MP W +
Sbjct: 360 FFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNAL 417
Query: 496 LGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYA 534
+G D ++A LAA++ M++E +S ++S + A
Sbjct: 418 IGGYAEDEDPDKA-LAAFQTMRVEGVSSNYITVVSVLSA 455
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 476 bits (1226), Expect = e-134, Method: Compositional matrix adjust.
Identities = 260/688 (37%), Positives = 406/688 (59%), Gaps = 26/688 (3%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGG------CLPCTFLTNHLLNLYSKCGE--LDYAIKL 73
+I+ C+ + + G+ L++ G C+ C+ L++++ K GE + A K+
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCS-----LIDMFVK-GENSFENAYKV 225
Query: 74 FDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSI 133
FD+MS+ N+V+WT MIT + REA+ F M G + +F LSSV ACA L ++
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENL 285
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKC---GEVSDACKVFEEMPCKDEVLWTSMI 190
G Q+H ++SG ++ +L DMY+KC G V D KVF+ M + WT++I
Sbjct: 286 SLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALI 343
Query: 191 DGYVKNGNF-EKALIAYKKMVTD-NVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFG 248
GY+KN N +A+ + +M+T +V + S AC L GK + K G
Sbjct: 344 TGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRG 403
Query: 249 FEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAF 308
+ + N++ ++ KS M A F+S S +N+VS+ +DG E+A
Sbjct: 404 LASNSSVANSVISMFVKSDRMEDAQRAFESLSE-KNLVSYNTFLDGTCRNLNFEQAFKLL 462
Query: 309 IDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKC 368
++ + + FTF+SL+ AN + G +H QVVK + V +AL+ MY KC
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKC 522
Query: 369 GLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLL 428
G D + ++F+ +EN N +W +++ FA+HG +ETFN+M++ G+KPN VT+V +L
Sbjct: 523 GSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAIL 582
Query: 429 KGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPT 488
CSH G+V +G +F SM + + + P+ EHY C++DLL RAG L + +FIN+MPF+
Sbjct: 583 SACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD 642
Query: 489 AFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKM 548
W +FLGAC+ H + E KLAA K+++L+P A++ LSNIYA +WE+ +R+
Sbjct: 643 VLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRK 702
Query: 549 IRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESV 608
+++ N+ K G SW+++G++ H F V D +HP +IY++LD L+ +IK GYVP T+ V
Sbjct: 703 MKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLV 762
Query: 609 LIEM----DDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISK 664
L ++ D+ KE+LL+ HSE+IAVA+ L+ + +P+ V KNLRVC DCH+A KYIS
Sbjct: 763 LHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYIST 822
Query: 665 VTERNIIVRDISRFHHFSNGSCSCGDYW 692
V+ R I++RD++RFHHF +G CSC DYW
Sbjct: 823 VSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 250/500 (50%), Gaps = 17/500 (3%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS + L+++C +A++ GK +HA+LI P + L N L++LYSK G+ A +F
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 75 D---RMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLG 131
+ R KR++VSW+AM+ + + R +A+ F + G + + ++V++AC++
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 132 SIQFGVQVHCLVVKSG-FGCELFLGSNLTDMYSKCGEVS--DACKVFEEMPCKDEVLWTS 188
+ G ++K+G F ++ +G +L DM+ K GE S +A KVF++M + V WT
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVTWTL 239
Query: 189 MIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFG 248
MI ++ G +A+ + MV D+ L S SAC L+ S GK LH+ ++ G
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 249 FEYETFIGNALTDLYSK---SGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQL-EKA 304
+ + +L D+Y+K G + VF +++S+TA++ GY++ L +A
Sbjct: 300 LVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMED-HSVMSWTALITGYMKNCNLATEA 356
Query: 305 LNAFIDLRNSG-IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVD 363
+N F ++ G +EPN FTFSS KAC N + G + GQ K + V+++++
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVIS 416
Query: 364 MYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVT 423
M+ K + + + F+ + N ++NT + ++ A + +E+ +R L +A T
Sbjct: 417 MFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFT 476
Query: 424 FVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
F +LL G ++ G + G + K+ G+ + N +I + + G + N M
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKL-GLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 484 PFEPTAFGWCSFLGACKTHG 503
W S + HG
Sbjct: 536 E-NRNVISWTSMITGFAKHG 554
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 133/249 (53%), Gaps = 5/249 (2%)
Query: 189 MIDGYVKNGNFEKALIAYKKMVTDNVF-IDQHVLCSTLSACTALKAFSFGKSLHAIIVKF 247
+I ++ G+ A+ A M D + +D S L +C + F GK +HA +++F
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 248 GFEYETFIGNALTDLYSKSGDMVSASNVFQSDS--GCRNIVSFTAIVDGYVEMDQLEKAL 305
E ++ + N+L LYSKSGD A +VF++ G R++VS++A++ Y + A+
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 306 NAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF-NFDRDPFVSSALVDM 364
F++ G+ PN++ ++++I+AC+N + G + G ++K +F+ D V +L+DM
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 365 YGKC-GLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVT 423
+ K F+++ ++FD++ N W ++ Q G R AI F +MV G + + T
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 424 FVNLLKGCS 432
++ C+
Sbjct: 272 LSSVFSACA 280
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 104/193 (53%), Gaps = 2/193 (1%)
Query: 20 AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK 79
A L+ A + KG+Q+H+Q+++ G + N L+++YSKCG +D A ++F+ M
Sbjct: 478 ASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMEN 537
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ- 138
RN++SWT+MITGF + L+TF QM EG ++ ++L AC+ +G + G +
Sbjct: 538 RNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRH 597
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVL-WTSMIDGYVKNG 197
+ + ++ + + D+ + G ++DA + MP + +VL W + + +
Sbjct: 598 FNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHS 657
Query: 198 NFEKALIAYKKMV 210
N E +A +K++
Sbjct: 658 NTELGKLAARKIL 670
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 474 bits (1221), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/680 (36%), Positives = 390/680 (57%), Gaps = 10/680 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + +++ C + + G ++H ++ G + ++ L++LYS+ + A LF
Sbjct: 152 DYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF 208
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
D M R+M SW AMI+G+ +S +EAL +RA + S+L AC G
Sbjct: 209 DEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFN 264
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
GV +H +K G ELF+ + L D+Y++ G + D KVF+ M +D + W S+I Y
Sbjct: 265 RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYE 324
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
N +A+ +++M + D L S S + L +S+ ++ G+ E
Sbjct: 325 LNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDI 384
Query: 255 -IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
IGNA+ +Y+K G + SA VF +++S+ I+ GY + +A+ + +
Sbjct: 385 TIGNAVVVMYAKLGLVDSARAVFNWLPNT-DVISWNTIISGYAQNGFASEAIEMYNIMEE 443
Query: 314 SG-IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
G I N+ T+ S++ AC+ L G LHG+++K D FV ++L DMYGKCG +
Sbjct: 444 EGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLE 503
Query: 373 HSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
++ LF +I N WNTL+ HG G A+ F EM+D G+KP+ +TFV LL CS
Sbjct: 504 DALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS 563
Query: 433 HAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGW 492
H+G+V++G F M YG+ P +HY C++D+ GRAG+L+ FI SM +P A W
Sbjct: 564 HSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIW 623
Query: 493 CSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDG 552
+ L AC+ HG+ + K+A+ L ++EPE+ G HVLLSN+YA +WE V +R +
Sbjct: 624 GALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGK 683
Query: 553 NMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEM 612
++K PG+S +++ N+ VF + +HP +E+Y +L +L ++K++GYVP VL ++
Sbjct: 684 GLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDV 743
Query: 613 DDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIV 672
+D KE +L +HSER+A+A++L+ +P I + KNLRVC DCHS K+ISK+TER IIV
Sbjct: 744 EDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIV 803
Query: 673 RDISRFHHFSNGSCSCGDYW 692
RD +RFHHF NG CSCGDYW
Sbjct: 804 RDSNRFHHFKNGVCSCGDYW 823
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 246/486 (50%), Gaps = 25/486 (5%)
Query: 32 LSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITG 91
L K LHA+L+ + ++ L+NLY G + A FD + R++ +W MI+G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 92 FFRSLRFREALDTFCQ-MRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGC 150
+ R+ E + F M + G T SVL+AC ++ G ++HCL +K GF
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMW 183
Query: 151 ELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMV 210
++++ ++L +YS+ V +A +F+EMP +D W +MI GY ++GN ++AL +
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 211 TDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMV 270
+D + S LSACT F+ G ++H+ +K G E E F+ N L DLY++ G +
Sbjct: 244 A----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 271 SASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKAC 330
VF R+++S+ +I+ Y +Q +A++ F ++R S I+P+ T SL
Sbjct: 300 DCQKVFDR-MYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358
Query: 331 ANQAKLEHGSLLHGQVVKFN-FDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAW 389
+ + + G ++ F D + +A+V MY K GL D + +F+ + N + +W
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISW 418
Query: 390 NTLVGVFAQHGLGRNAIETFNEMVDRG-LKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMD 448
NT++ +AQ+G AIE +N M + G + N T+V++L CS AG + G+
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM------- 471
Query: 449 KIYGVMPREEHY------NCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTH 502
K++G + + Y + D+ G+ G+L++ +P + W + + H
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFH 530
Query: 503 GDKERA 508
G E+A
Sbjct: 531 GHGEKA 536
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 473 bits (1216), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/675 (36%), Positives = 394/675 (58%), Gaps = 16/675 (2%)
Query: 32 LSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITG 91
L GKQ+HA +R G L +F+ N L+ +Y K G+L + L R++V+W +++
Sbjct: 218 LMMGKQVHAYGLRKGELN-SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS 276
Query: 92 FFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCE 151
++ + EAL+ +M EG +F +SSVL AC+ L ++ G ++H +K+G E
Sbjct: 277 LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 336
Query: 152 -LFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMV 210
F+GS L DMY C +V +VF+ M + LW +MI GY +N + ++AL+ + M
Sbjct: 337 NSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME 396
Query: 211 -TDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDM 269
+ + + + + AC AFS +++H +VK G + + F+ N L D+YS+ G +
Sbjct: 397 ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKI 456
Query: 270 VSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN-----------SGIEP 318
A +F R++V++ ++ GYV + E AL ++N ++P
Sbjct: 457 DIAMRIFGKMED-RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKP 515
Query: 319 NEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLF 378
N T +++ +CA + L G +H +K N D V SALVDMY KCG S ++F
Sbjct: 516 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVF 575
Query: 379 DEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVE 438
D+I N WN ++ + HG G+ AI+ M+ +G+KPN VTF+++ CSH+GMV+
Sbjct: 576 DQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 635
Query: 439 DGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFG-WCSFLG 497
+GL FY M YGV P +HY C++DLLGRAG++KE +N MP + G W S LG
Sbjct: 636 EGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLG 695
Query: 498 ACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKL 557
A + H + E ++AA L++LEP + +VLL+NIY+ W+ +R+ +++ ++K
Sbjct: 696 ASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKE 755
Query: 558 PGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLK 617
PG SW++ G+E H F D SHP+ +++ L++L ++++ GYVP T VL +++ K
Sbjct: 756 PGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEK 815
Query: 618 EKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISR 677
E LL HSE++A+A+ +L + G I V KNLRVC+DCH A K+ISK+ +R II+RD+ R
Sbjct: 816 EILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRR 875
Query: 678 FHHFSNGSCSCGDYW 692
FH F NG+CSCGDYW
Sbjct: 876 FHRFKNGTCSCGDYW 890
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 149/524 (28%), Positives = 258/524 (49%), Gaps = 47/524 (8%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIR-GGCLPCTFLTNHLLNLYSKCGELDYAIKL 73
D+ A L++ A +++ GKQ+HA + + G + + N L+NLY KCG+ K+
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155
Query: 74 FDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLG-- 131
FDR+S+RN VSW ++I+ ++ AL+ F M E S F L SV+ AC++L
Sbjct: 156 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 215
Query: 132 -SIQFGVQVHCLVVKSGFGCEL--FLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTS 188
+ G QVH ++ G EL F+ + L MY K G+++ + + +D V W +
Sbjct: 216 EGLMMGKQVHAYGLRKG---ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 272
Query: 189 MIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFG 248
++ +N +AL ++MV + V D+ + S L AC+ L+ GK LHA +K G
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 249 -FEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNA 307
+ +F+G+AL D+Y ++S VF R I + A++ GY + + ++AL
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD-RKIGLWNAMIAGYSQNEHDKEALLL 391
Query: 308 FIDLRNS-GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYG 366
FI + S G+ N T + ++ AC +HG VVK DRD FV + L+DMY
Sbjct: 392 FIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYS 451
Query: 367 KCGLFDHSIQLFDEIENPNDTAWNTLVG--VFAQHG----LGRNAIETFNEMVDRG---- 416
+ G D ++++F ++E+ + WNT++ VF++H L + ++ V +G
Sbjct: 452 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 511
Query: 417 -LKPNAVTFVNLLKGCS-----------HAGMVEDGLNYFYSMDKIYGVMPREEHYNCII 464
LKPN++T + +L C+ HA +++ L + D G + ++
Sbjct: 512 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL----ATDVAVG--------SALV 559
Query: 465 DLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERA 508
D+ + G L+ + +P + W + A HG+ + A
Sbjct: 560 DMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEA 602
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 200/401 (49%), Gaps = 21/401 (5%)
Query: 85 WTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVV 144
W ++ RS REA+ T+ M G +A ++L+A A L ++ G Q+H V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 145 KSGFGCE-LFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKAL 203
K G+G + + + + L ++Y KCG+ KVF+ + +++V W S+I +E AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 204 IAYKKMVTDNVFIDQHVLCSTLSACTAL---KAFSFGKSLHAIIVKFGFEYETFIGNALT 260
A++ M+ +NV L S ++AC+ L + GK +HA ++ G E +FI N L
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243
Query: 261 DLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNE 320
+Y K G + S S V G R++V++ ++ + +QL +AL ++ G+EP+E
Sbjct: 244 AMYGKLGKLAS-SKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 321 FTFSSLIKACANQAKLEHGSLLHGQVVK-FNFDRDPFVSSALVDMYGKCGLFDHSIQLFD 379
FT SS++ AC++ L G LH +K + D + FV SALVDMY C ++FD
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 380 EIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDR-GLKPNAVTFVNLLKGCSHAGMVE 438
+ + WN ++ ++Q+ + A+ F M + GL N+ T ++ C +G
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA-- 420
Query: 439 DGLNYFYSMDKIYGVMPREEH------YNCIIDLLGRAGKL 473
F + I+G + + N ++D+ R GK+
Sbjct: 421 -----FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKI 456
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 181/380 (47%), Gaps = 53/380 (13%)
Query: 13 LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIK 72
L +S +A ++ C ++ S+ + +H +++ G F+ N L+++YS+ G++D A++
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 73 LFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQM----RAEGETASQFALS------- 121
+F +M R++V+W MITG+ S +AL +M R + AS+ +L
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 122 SVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK 181
++L +CA+L ++ G ++H +K+ ++ +GS L DMY+KCG + + KVF+++P K
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 182 DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFG-KSL 240
+ + W +I Y +GN ++A+ + M+ V ++ S +AC+ G +
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Query: 241 HAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQ 300
+ + +G E + + DL ++G I + Y M+
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGR----------------------IKEAYQLMNM 679
Query: 301 LEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS- 359
+ + D +G +SSL+ A LE G + +++ +P V+S
Sbjct: 680 MPR------DFNKAG------AWSSLLGASRIHNNLEIGEIAAQNLIQL----EPNVASH 723
Query: 360 --ALVDMYGKCGLFDHSIQL 377
L ++Y GL+D + ++
Sbjct: 724 YVLLANIYSSAGLWDKATEV 743
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 111/215 (51%), Gaps = 8/215 (3%)
Query: 272 ASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACA 331
A ++F S S R+ + ++ V + L +A+ ++D+ GI+P+ + F +L+KA A
Sbjct: 51 APSIFISQS--RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVA 108
Query: 332 NQAKLEHGSLLHGQVVKFNFDRDPF-VSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWN 390
+ +E G +H V KF + D V++ LV++Y KCG F ++FD I N +WN
Sbjct: 109 DLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWN 168
Query: 391 TLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKI 450
+L+ A+E F M+D ++P++ T V+++ CS+ M E GL +
Sbjct: 169 SLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE-GLMMGKQVHA- 226
Query: 451 YGVMPREEH---YNCIIDLLGRAGKLKEVEDFINS 482
YG+ E + N ++ + G+ GKL + + S
Sbjct: 227 YGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGS 261
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 466 bits (1200), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/679 (35%), Positives = 384/679 (56%), Gaps = 5/679 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
+S A I + ++ G+ +H Q + GC L ++++ +Y K ++ A K+F
Sbjct: 118 NSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVF 177
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETA-SQFALSSVLQACASLGSI 133
DRM +++ + W MI+G+ ++ + E++ F + E T L +L A A L +
Sbjct: 178 DRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQEL 237
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
+ G+Q+H L K+G ++ + +YSKCG++ +F E D V + +MI GY
Sbjct: 238 RLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGY 297
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
NG E +L +K+++ + L S + L ++H +K F
Sbjct: 298 TSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHA 354
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
+ ALT +YSK ++ SA +F +S +++ S+ A++ GY + E A++ F +++
Sbjct: 355 SVSTALTTVYSKLNEIESARKLFD-ESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK 413
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
S PN T + ++ ACA L G +H V +F+ +VS+AL+ MY KCG
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAE 473
Query: 374 SIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSH 433
+ +LFD + N+ WNT++ + HG G+ A+ F EM++ G+ P VTF+ +L CSH
Sbjct: 474 ARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSH 533
Query: 434 AGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWC 493
AG+V++G F SM YG P +HY C++D+LGRAG L+ FI +M EP + W
Sbjct: 534 AGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWE 593
Query: 494 SFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGN 553
+ LGAC+ H D A+ + KL +L+P+N G HVLLSNI++ +R + +R+ +
Sbjct: 594 TLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRK 653
Query: 554 MKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMD 613
+ K PGY+ ++IG HVF D SHP+ KEIYEKL+ L +++ GY P+TE L +++
Sbjct: 654 LAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVE 713
Query: 614 DTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVR 673
+ +E ++ HSER+A+A+ L+ + G I + KNLRVC DCH+ K ISK+TER I+VR
Sbjct: 714 EEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVR 773
Query: 674 DISRFHHFSNGSCSCGDYW 692
D +RFHHF +G CSCGDYW
Sbjct: 774 DANRFHHFKDGVCSCGDYW 792
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/501 (25%), Positives = 222/501 (44%), Gaps = 17/501 (3%)
Query: 28 QAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTA 87
++ +S Q HAQ+I G L L S G + YA +F + + ++ +
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88
Query: 88 MITGFFRSLRFREALDTFCQMRAEGE---TASQFALSSVLQACASLGSIQFGVQVHCLVV 144
++ GF + +L F +R + +S +A + + A + + G +H V
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA--ISAASGFRDDRAGRVIHGQAV 146
Query: 145 KSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALI 204
G EL LGSN+ MY K V DA KVF+ MP KD +LW +MI GY KN + +++
Sbjct: 147 VDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQ 206
Query: 205 AYKKMVTDN-VFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLY 263
++ ++ ++ +D L L A L+ G +H++ K G ++ LY
Sbjct: 207 VFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLY 266
Query: 264 SKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTF 323
SK G + S +F+ + +IV++ A++ GY + E +L+ F +L SG T
Sbjct: 267 SKCGKIKMGSALFR-EFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTL 325
Query: 324 SSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN 383
SL+ + + +HG +K NF VS+AL +Y K + + +LFDE
Sbjct: 326 VSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE 382
Query: 384 PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNY 443
+ +WN ++ + Q+GL +AI F EM PN VT +L C+ G + G +
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KW 441
Query: 444 FYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHG 503
+ + + +I + + G + E + M + W + + HG
Sbjct: 442 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISGYGLHG 500
Query: 504 DKERAKLAAYKLMKLEPENSG 524
+ A Y+++ NSG
Sbjct: 501 QGQEALNIFYEML-----NSG 516
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 465 bits (1196), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/656 (35%), Positives = 387/656 (58%), Gaps = 2/656 (0%)
Query: 38 LHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLR 97
LH+ +++ G F+ L+N YS CG +D A +F+ + +++V W +++ + +
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 98 FREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSN 157
F ++L MR G + + + L+A LG+ F VH ++K+ + + +G
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 158 LTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFID 217
L +Y++ G++SDA KVF EMP D V W+ MI + +NG +A+ + +M V +
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 218 QHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQ 277
+ L S L+ C K G+ LH ++VK GF+ + ++ NAL D+Y+K M +A +F
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 278 SDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLE 337
S +N VS+ ++ GY + + KA + F + + + E TFSS + ACA+ A ++
Sbjct: 408 ELSS-KNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMD 466
Query: 338 HGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFA 397
G +HG +K N + VS++L+DMY KCG + +F+E+E + +WN L+ ++
Sbjct: 467 LGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYS 526
Query: 398 QHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPRE 457
HGLGR A+ + M DR KPN +TF+ +L GCS+AG+++ G F SM + +G+ P
Sbjct: 527 THGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCL 586
Query: 458 EHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMK 517
EHY C++ LLGR+G+L + I +P+EP+ W + L A ++E A+ +A +++K
Sbjct: 587 EHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILK 646
Query: 518 LEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDW 577
+ P++ +VL+SN+YA +QW +V +RK +++ +KK PG SW++ + H F V
Sbjct: 647 INPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLS 706
Query: 578 SHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVS 637
HP K I L+ L + GYVP +VL++MDD K+K L HSER+A+AY L+
Sbjct: 707 DHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRM 766
Query: 638 PIGK-PIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
P + I++ KNLR+CSDCHSA K IS + +R++++RD++RFHHF G CSCGD+W
Sbjct: 767 PSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/546 (28%), Positives = 260/546 (47%), Gaps = 23/546 (4%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS A +++ C Q + K +H +++ G F TN LLN Y K G A+ LF
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
D M +RN VS+ + G+ ++ + + ++ EG + +S L+ SL +
Sbjct: 108 DEMPERNNVSFVTLAQGY----ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
+H +VK G+ F+G+ L + YS CG V A VFE + CKD V+W ++ YV
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+NG FE +L M + + + L A L AF F K +H I+K + +
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+G L LY++ GDM A VF ++ ++V ++ ++ + + +A++ FI +R +
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVF-NEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
+ PNEFT SS++ CA G LHG VVK FD D +VS+AL+D+Y KC D +
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTA 402
Query: 375 IQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHA 434
++LF E+ + N+ +WNT++ + G G A F E + + VTF + L C+
Sbjct: 403 VKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASL 462
Query: 435 GMVEDGLNYFYSMDKIYGVMPREEHY------NCIIDLLGRAGKLKEVEDFINSMPFEPT 488
++ G+ +++G+ + + N +ID+ + G +K + N M
Sbjct: 463 ASMDLGV-------QVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDV 515
Query: 489 AFGWCSFLGACKTHGDKERAKLAAYKLMK---LEPENSGAHVLLSNIYAKERQWEDVRCL 545
A W + + THG +A L +MK +P +LS + C
Sbjct: 516 A-SWNALISGYSTHGLGRQA-LRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECF 573
Query: 546 RKMIRD 551
MIRD
Sbjct: 574 ESMIRD 579
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 114/276 (41%), Gaps = 20/276 (7%)
Query: 216 IDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNV 275
+D H + L C K++H I+K G + F N L + Y K+G A N+
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 276 FQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAK 335
F + RN VSF + GY D + + L G E N F+S +K + K
Sbjct: 107 FD-EMPERNNVSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDK 161
Query: 336 LEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGV 395
E LH +VK +D + FV +AL++ Y CG D + +F+ I + W +V
Sbjct: 162 AEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSC 221
Query: 396 FAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG-------LNYFYSMD 448
+ ++G ++++ + M G PN TF LK G + L Y +D
Sbjct: 222 YVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLD 281
Query: 449 KIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMP 484
GV ++ L + G + + N MP
Sbjct: 282 PRVGV--------GLLQLYTQLGDMSDAFKVFNEMP 309
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 92/201 (45%), Gaps = 7/201 (3%)
Query: 9 FRHKLCDSKAVAQL-----IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSK 63
FR L + +V ++ + CA + G Q+H I+ ++N L+++Y+K
Sbjct: 437 FREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAK 496
Query: 64 CGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSV 123
CG++ +A +F+ M ++ SW A+I+G+ R+AL M+ + V
Sbjct: 497 CGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGV 556
Query: 124 LQACASLGSIQFGVQ-VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKD 182
L C++ G I G + ++ G L + + + + G++ A K+ E +P +
Sbjct: 557 LSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEP 616
Query: 183 EVL-WTSMIDGYVKNGNFEKA 202
V+ W +M+ + N E A
Sbjct: 617 SVMIWRAMLSASMNQNNEEFA 637
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 464 bits (1194), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/694 (36%), Positives = 401/694 (57%), Gaps = 11/694 (1%)
Query: 5 NLFRFRHKLCDSKAV----AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNL 60
N FR CD+ +QL++ C + +S K + A +++ G P + L++
Sbjct: 50 NQFRLLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSG-FPAEISGSKLVDA 108
Query: 61 YSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFAL 120
KCG++DYA ++FD MS+R++V+W ++I + R +EA++ + M ++ L
Sbjct: 109 SLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTL 168
Query: 121 SSVLQACASLGSIQFGVQVHCLVVKSGFGCE-LFLGSNLTDMYSKCGEVSDACKVFEEMP 179
SSV +A + L + + H L V G +F+GS L DMY K G+ +A V + +
Sbjct: 169 SSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVE 228
Query: 180 CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKS 239
KD VL T++I GY + G +A+ A++ M+ + V +++ S L +C LK GK
Sbjct: 229 EKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKL 288
Query: 240 LHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMD 299
+H ++VK GFE +L +Y + + + VF+ N VS+T+++ G V+
Sbjct: 289 IHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIE-YPNQVSWTSLISGLVQNG 347
Query: 300 QLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS 359
+ E AL F + I+PN FT SS ++ C+N A E G +HG V K+ FDRD + S
Sbjct: 348 REEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGS 407
Query: 360 ALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKP 419
L+D+YGKCG D + +FD + + + NT++ +AQ+G GR A++ F M++ GL+P
Sbjct: 408 GLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQP 467
Query: 420 NAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDF 479
N VT +++L C+++ +VE+G F S K +M +HY C++DLLGRAG+L+E E
Sbjct: 468 NDVTVLSVLLACNNSRLVEEGCELFDSFRK-DKIMLTNDHYACMVDLLGRAGRLEEAE-M 525
Query: 480 INSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQW 539
+ + P W + L ACK H E A+ K++++EP + G +L+SN+YA +W
Sbjct: 526 LTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKW 585
Query: 540 EDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVED-WSHPRKKEIYEKLDSLLDQIKI 598
V ++ ++D +KK P SWV+I ETH F D +SHP ++I E L+ L+ + K
Sbjct: 586 NRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKD 645
Query: 599 VGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSA 658
+GYV V +M++T KE+ LH HSE++A+A+++ + +G I + KNLRVC DCHS
Sbjct: 646 LGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRN-VGGSIRILKNLRVCVDCHSW 704
Query: 659 FKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
K +S+V +R II RD RFHHF +GSCSCGDYW
Sbjct: 705 IKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 461 bits (1185), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/707 (35%), Positives = 389/707 (55%), Gaps = 40/707 (5%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNL--YSKCGELDYAIKLFDRMSK 79
LI+ C ++L KQ H +IR G + + L + S L+YA K+FD + K
Sbjct: 36 LIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET-ASQFALSSVLQACASLGSIQFGVQ 138
N +W +I + ++ F M +E + +++ +++A A + S+ G
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGN 198
+H + VKS G ++F+ ++L Y CG++ ACKVF + KD V W SMI+G+V+ G+
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 199 FEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNA 258
+KAL +KKM +++V + LSAC ++ FG+ + + I + + NA
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 259 LTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKA-------------- 304
+ D+Y+K G + A +F + N V++T ++DGY + E A
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDN-VTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 305 LNAFIDLRNSGIEPNE------------------FTFSSLIKACANQAKLEHGSLLHGQV 346
NA I +PNE T S + ACA LE G +H +
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 347 VKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAI 406
K + V+SAL+ MY KCG + S ++F+ +E + W+ ++G A HG G A+
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 451
Query: 407 ETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDL 466
+ F +M + +KPN VTF N+ CSH G+V++ + F+ M+ YG++P E+HY CI+D+
Sbjct: 452 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 511
Query: 467 LGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAH 526
LGR+G L++ FI +MP P+ W + LGACK H + A++A +L++LEP N GAH
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAH 571
Query: 527 VLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIY 586
VLLSNIYAK +WE+V LRK +R +KK PG S ++I H F D +HP +++Y
Sbjct: 572 VLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVY 631
Query: 587 EKLDSLLDQIKIVGYVPQTESVL-IEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIV 645
KL +++++K GY P+ VL I ++ +KE+ L+ HSE++A+ Y L+ + K I V
Sbjct: 632 GKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRV 691
Query: 646 KKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
KNLRVC DCHS K IS++ +R IIVRD RFHHF NG CSC D+W
Sbjct: 692 IKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 458 bits (1179), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/674 (37%), Positives = 395/674 (58%), Gaps = 6/674 (0%)
Query: 25 TCAQAKELSKGKQLHAQLIRGGCLPCTF-LTNHLLNLYSKCGELDYAIKLFDRMSKRNMV 83
+ A+ L KG+++H +I G + + N L+N+Y+KCG + A ++F M+ ++ V
Sbjct: 322 SLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSV 381
Query: 84 SWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLV 143
SW +MITG ++ F EA++ + MR F L S L +CASL + G Q+H
Sbjct: 382 SWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGES 441
Query: 144 VKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKN-GNFEKA 202
+K G + + + L +Y++ G +++ K+F MP D+V W S+I ++ + +A
Sbjct: 442 LKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEA 501
Query: 203 LIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDL 262
++ + +++ S LSA ++L GK +H + +K E NAL
Sbjct: 502 VVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIAC 561
Query: 263 YSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFT 322
Y K G+M +F + R+ V++ +++ GY+ + L KAL+ + +G + F
Sbjct: 562 YGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFM 621
Query: 323 FSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE 382
+++++ A A+ A LE G +H V+ + D V SALVDMY KCG D++++ F+ +
Sbjct: 622 YATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP 681
Query: 383 NPNDTAWNTLVGVFAQHGLGRNAIETFNEM-VDRGLKPNAVTFVNLLKGCSHAGMVEDGL 441
N +WN+++ +A+HG G A++ F M +D P+ VTFV +L CSHAG++E+G
Sbjct: 682 VRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGF 741
Query: 442 NYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGA-CK 500
+F SM YG+ PR EH++C+ D+LGRAG+L ++EDFI MP +P W + LGA C+
Sbjct: 742 KHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCR 801
Query: 501 THGDK-ERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPG 559
+G K E K AA L +LEPEN+ +VLL N+YA +WED+ RK ++D ++KK G
Sbjct: 802 ANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAG 861
Query: 560 YSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEK 619
YSWV + + H+F D SHP IY+KL L +++ GYVPQT L +++ KE+
Sbjct: 862 YSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEE 921
Query: 620 LLHNHSERIAVAYSLLVSPIGK-PIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRF 678
+L HSE++AVA+ L PI + KNLRVC DCHSAFKYISK+ R II+RD +RF
Sbjct: 922 ILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRF 981
Query: 679 HHFSNGSCSCGDYW 692
HHF +G+CSC D+W
Sbjct: 982 HHFQDGACSCSDFW 995
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 226/488 (46%), Gaps = 17/488 (3%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
+Q+C + + H++L + +L N+L+N Y + G+ A K+FD M RN
Sbjct: 9 FVQSCVGHR--GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRN 66
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGS--IQFGVQV 139
VSW +++G+ R+ +EAL M EG ++Q+A SVL+AC +GS I FG Q+
Sbjct: 67 CVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQI 126
Query: 140 HCLVVKSGFGCELFLGSNLTDMYSKC-GEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGN 198
H L+ K + + + + L MY KC G V A F ++ K+ V W S+I Y + G+
Sbjct: 127 HGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGD 186
Query: 199 FEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKA--FSFGKSLHAIIVKFGFEYETFIG 256
A + M D ++ S ++ +L + + I K G + F+G
Sbjct: 187 QRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVG 246
Query: 257 NALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI 316
+ L ++KSG + A VF RN V+ ++ G V E+A F+D+ NS I
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQME-TRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMI 304
Query: 317 EPNEFTFSSLIK-----ACANQAKLEHGSLLHGQVVKFNF-DRDPFVSSALVDMYGKCGL 370
+ + ++ L+ + A + L+ G +HG V+ D + + LV+MY KCG
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 371 FDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKG 430
+ ++F + + + +WN+++ Q+G A+E + M + P + T ++ L
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424
Query: 431 CSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAF 490
C+ + G K+ G+ N ++ L G L E +SMP E
Sbjct: 425 CASLKWAKLGQQIHGESLKL-GIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQV 482
Query: 491 GWCSFLGA 498
W S +GA
Sbjct: 483 SWNSIIGA 490
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 206/432 (47%), Gaps = 25/432 (5%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM 82
+ +CA K G+Q+H + ++ G ++N L+ LY++ G L+ K+F M + +
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 83 VSWTAMITGFFRSLR-FREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
VSW ++I RS R EA+ F + G+ ++ SSVL A +SL + G Q+H
Sbjct: 482 VSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHG 541
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP-CKDEVLWTSMIDGYVKNGNFE 200
L +K+ E + L Y KCGE+ K+F M +D V W SMI GY+ N
Sbjct: 542 LALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLA 601
Query: 201 KALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALT 260
KAL M+ +D + + LSA ++ G +HA V+ E + +G+AL
Sbjct: 602 KALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALV 661
Query: 261 DLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSG-IEPN 319
D+YSK G + A F + RN S+ +++ GY Q E+AL F ++ G P+
Sbjct: 662 DMYSKCGRLDYALRFFNT-MPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPD 720
Query: 320 EFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFDHSIQL 377
TF ++ AC++ LE G H + + ++ P + S + D+ G+ G D +L
Sbjct: 721 HVTFVGVLSACSHAGLLEEG-FKHFESMSDSYGLAPRIEHFSCMADVLGRAGELD---KL 776
Query: 378 FDEIE----NPNDTAWNTLVGVFAQHG-----LGRNAIETFNEMVDRGLKP-NAVTFVNL 427
D IE PN W T++G + LG+ A E + L+P NAV +V L
Sbjct: 777 EDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQ-----LEPENAVNYVLL 831
Query: 428 LKGCSHAGMVED 439
+ G ED
Sbjct: 832 GNMYAAGGRWED 843
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 2/195 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS A ++ A L +G ++HA +R + + L+++YSKCG LDYA++ F
Sbjct: 618 DSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFF 677
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETAS-QFALSSVLQACASLGSI 133
+ M RN SW +MI+G+ R + EAL F M+ +G+T VL AC+ G +
Sbjct: 678 NTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLL 737
Query: 134 QFGVQ-VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDG 192
+ G + + G + S + D+ + GE+ E+MP K VL + G
Sbjct: 738 EEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLG 797
Query: 193 YVKNGNFEKALIAYK 207
N KA + K
Sbjct: 798 ACCRANGRKAELGKK 812
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/675 (34%), Positives = 384/675 (56%), Gaps = 7/675 (1%)
Query: 20 AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK 79
A LI + +L KQ+HA+L+ G FL L++ S G++ +A ++FD + +
Sbjct: 25 ASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPR 81
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQV 139
+ W A+I G+ R+ F++AL + M+ + F +L+AC+ L +Q G V
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 140 HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVL--WTSMIDGYVKNG 197
H V + GF ++F+ + L +Y+KC + A VFE +P + + WT+++ Y +NG
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 198 NFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGN 257
+AL + +M +V D L S L+A T L+ G+S+HA +VK G E E +
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 258 ALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIE 317
+L +Y+K G + +A +F N++ + A++ GY + +A++ F ++ N +
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKS-PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR 320
Query: 318 PNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQL 377
P+ + +S I ACA LE ++ V + ++ D F+SSAL+DM+ KCG + + +
Sbjct: 321 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLV 380
Query: 378 FDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMV 437
FD + + W+ ++ + HG R AI + M G+ PN VTF+ LL C+H+GMV
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMV 440
Query: 438 EDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLG 497
+G +F M + + P+++HY C+IDLLGRAG L + + I MP +P W + L
Sbjct: 441 REGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLS 499
Query: 498 ACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKL 557
ACK H E + AA +L ++P N+G +V LSN+YA R W+ V +R +++ + K
Sbjct: 500 ACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKD 559
Query: 558 PGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLK 617
G SWV++ F V D SHPR +EI +++ + ++K G+V ++ L +++D
Sbjct: 560 VGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEA 619
Query: 618 EKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISR 677
E+ L +HSERIA+AY L+ +P G P+ + KNLR C +CH+A K ISK+ +R I+VRD +R
Sbjct: 620 EETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNR 679
Query: 678 FHHFSNGSCSCGDYW 692
FHHF +G CSCGDYW
Sbjct: 680 FHHFKDGVCSCGDYW 694
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 198/388 (51%), Gaps = 4/388 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS L++ C+ L G+ +HAQ+ R G F+ N L+ LY+KC L A +F
Sbjct: 118 DSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177
Query: 75 D--RMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGS 132
+ + +R +VSWTA+++ + ++ EAL+ F QMR AL SVL A L
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD 237
Query: 133 IQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDG 192
++ G +H VVK G E L +L MY+KCG+V+ A +F++M + +LW +MI G
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
Y KNG +A+ + +M+ +V D + S +SAC + + +S++ + + + +
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR 312
FI +AL D+++K G + A VF R++V ++A++ GY + +A++ + +
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLD-RDVVVWSAMIVGYGLHGRAREAISLYRAME 416
Query: 313 NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
G+ PN+ TF L+ AC + + G ++ + + ++D+ G+ G D
Sbjct: 417 RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLD 476
Query: 373 HSIQLFDEIE-NPNDTAWNTLVGVFAQH 399
+ ++ + P T W L+ +H
Sbjct: 477 QAYEVIKCMPVQPGVTVWGALLSACKKH 504
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 101/219 (46%), Gaps = 2/219 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ ++ I CAQ L + + ++ + R F+++ L+++++KCG ++ A +F
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
DR R++V W+AMI G+ R REA+ + M G + +L AC G ++
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEV-LWTSMIDGY 193
G + + + + D+ + G + A +V + MP + V +W +++
Sbjct: 442 EGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Query: 194 VKNGNFEKALIAYKKMVT-DNVFIDQHVLCSTLSACTAL 231
K+ + E A +++ + D +V S L A L
Sbjct: 502 KKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARL 540
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 456 bits (1172), Expect = e-128, Method: Compositional matrix adjust.
Identities = 251/703 (35%), Positives = 390/703 (55%), Gaps = 34/703 (4%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM 82
+ CA+++ G Q+H +++ G F+ N L++ Y++CGELD A K+FD MS+RN+
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 83 VSWTAMITGFFRSLRFREALDTFCQM-RAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
VSWT+MI G+ R ++A+D F +M R E T + + V+ ACA L ++ G +V+
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
+ SG + S L DMY KC + A ++F+E + L +M YV+ G +
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
AL + M+ V D+ + S +S+C+ L+ +GKS H +++ GFE I NAL D
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 262 LYSK-------------------------------SGDMVSASNVFQSDSGCRNIVSFTA 290
+Y K +G++ +A F++ +NIVS+
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE-KNIVSWNT 439
Query: 291 IVDGYVEMDQLEKALNAFIDLRNS-GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF 349
I+ G V+ E+A+ F +++ G+ + T S+ AC + L+ ++ + K
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 350 NFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETF 409
D + + LVDM+ +CG + ++ +F+ + N + +AW +G A G AIE F
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 410 NEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGR 469
++M+++GLKP+ V FV L CSH G+V+ G FYSM K++GV P + HY C++DLLGR
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 470 AGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLL 529
AG L+E I MP EP W S L AC+ G+ E A AA K+ L PE +G++VLL
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 530 SNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKL 589
SN+YA +W D+ +R +++ ++K PG S + I +TH F D SHP I L
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
Query: 590 DSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNL 649
D + + +G+VP +VL+++D+ K +L HSE++A+AY L+ S G I + KNL
Sbjct: 740 DEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNL 799
Query: 650 RVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
RVCSDCHS K+ SKV R II+RD +RFH+ G CSCGD+W
Sbjct: 800 RVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 210/443 (47%), Gaps = 13/443 (2%)
Query: 16 SKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCG---ELDYAIK 72
+KA ++ C EL K H L + G L+ + G L +A +
Sbjct: 32 TKATPSSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKE 88
Query: 73 LFDRM-SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLG 131
+F+ S + ++I G+ S EA+ F +M G + ++ L ACA
Sbjct: 89 VFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSR 148
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMID 191
+ G+Q+H L+VK G+ +LF+ ++L Y++CGE+ A KVF+EM ++ V WTSMI
Sbjct: 149 AKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMIC 208
Query: 192 GYVKNGNFEKALIAYKKMVTDNVFIDQHV-LCSTLSACTALKAFSFGKSLHAIIVKFGFE 250
GY + + A+ + +MV D V + +SAC L+ G+ ++A I G E
Sbjct: 209 GYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE 268
Query: 251 YETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID 310
+ +AL D+Y K + A +F + G N+ A+ YV +AL F
Sbjct: 269 VNDLMVSALVDMYMKCNAIDVAKRLFD-EYGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGL 370
+ +SG+ P+ + S I +C+ + G HG V++ F+ + +AL+DMY KC
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHR 387
Query: 371 FDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKG 430
D + ++FD + N WN++V + ++G A ETF M ++ N V++ ++ G
Sbjct: 388 QDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEK----NIVSWNTIISG 443
Query: 431 CSHAGMVEDGLNYFYSMDKIYGV 453
+ E+ + F SM GV
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGV 466
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 192/413 (46%), Gaps = 35/413 (8%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
+I CA+ ++L G++++A + G + + L+++Y KC +D A +LFD N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
+ AM + + R REAL F M G + ++ S + +C+ L +I +G H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
V+++GF + + L DMY KC A ++F+ M K V W S++ GYV+NG +
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 202 ALIAYKKMVTDNVF--------------------------------IDQHVLCSTLSACT 229
A ++ M N+ D + S SAC
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 230 ALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFT 289
L A K ++ I K G + + +G L D++S+ GD SA ++F S + R++ ++T
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN-RDVSAWT 540
Query: 290 AIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF 349
A + E+A+ F D+ G++P+ F + AC++ ++ G + ++K
Sbjct: 541 AAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600
Query: 350 N-FDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHG 400
+ + +VD+ G+ GL + ++QL +++ PND WN+L+ G
Sbjct: 601 HGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 153/355 (43%), Gaps = 66/355 (18%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D ++ I +C+Q + + GK H ++R G + N L+++Y KC D A ++F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 75 DRMSKR-------------------------------NMVSWTAMITGFFRSLRFREALD 103
DRMS + N+VSW +I+G + F EA++
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 104 TFCQMRA-EGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMY 162
FC M++ EG A + S+ AC LG++ ++ + K+G ++ LG+ L DM+
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515
Query: 163 SKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLC 222
S+CG+ A +F + +D WT+ I GN E+A+ + M+ + D
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575
Query: 223 STLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGC 282
L+AC+ H +V+ G E YS M+ V D
Sbjct: 576 GALTACS-----------HGGLVQQGKEI----------FYS----MLKLHGVSPED--- 607
Query: 283 RNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLE 337
V + +VD LE+A+ D+ +EPN+ ++SL+ AC Q +E
Sbjct: 608 ---VHYGCMVDLLGRAGLLEEAVQLIEDM---PMEPNDVIWNSLLAACRVQGNVE 656
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 140/301 (46%), Gaps = 16/301 (5%)
Query: 223 STLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVS------ASNVF 276
S+L C + K H + K G + + + +T L ++S ++ + A VF
Sbjct: 37 SSLKNCKTIDEL---KMFHRSLTKQGLDNDV---STITKLVARSCELGTRESLSFAKEVF 90
Query: 277 QSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKL 336
++ + +++ GY +A+ F+ + NSGI P+++TF + ACA
Sbjct: 91 ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAK 150
Query: 337 EHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVF 396
+G +HG +VK + +D FV ++LV Y +CG D + ++FDE+ N +W +++ +
Sbjct: 151 GNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGY 210
Query: 397 AQHGLGRNAIETFNEMV-DRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMP 455
A+ ++A++ F MV D + PN+VT V ++ C+ +E G Y+ + G+
Sbjct: 211 ARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETG-EKVYAFIRNSGIEV 269
Query: 456 REEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKL 515
+ + ++D+ + + + + + + C+ + + R L + L
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDE--YGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 516 M 516
M
Sbjct: 328 M 328
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/711 (34%), Positives = 398/711 (55%), Gaps = 44/711 (6%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDY------------ 69
L+++ A+ ++L GK LHA ++ T+L+NH +NLYSKCG L Y
Sbjct: 15 LLKSVAE-RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 70 -------------------AIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRA 110
A +LFD + + + VS+ +I+G+ + A+ F +MR
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133
Query: 111 EGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSD 170
G F LS ++ AC + Q+HC V GF + + YSK G + +
Sbjct: 134 LGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLRE 191
Query: 171 ACKVFEEM-PCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACT 229
A VF M +DEV W SMI Y ++ KAL YK+M+ ID L S L+A T
Sbjct: 192 AVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251
Query: 230 ALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSG---DMVSASNVFQSDSGCRNIV 286
+L G+ H ++K GF + +G+ L D YSK G M + VFQ + ++V
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQ-EILSPDLV 310
Query: 287 SFTAIVDGYVEMDQL-EKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQ 345
+ ++ GY ++L E+A+ +F ++ G P++ +F + AC+N + +HG
Sbjct: 311 VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGL 370
Query: 346 VVKFNFDRDPF-VSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRN 404
+K + + V++AL+ +Y K G + +FD + N ++N ++ +AQHG G
Sbjct: 371 AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTE 430
Query: 405 AIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCII 464
A+ + M+D G+ PN +TFV +L C+H G V++G YF +M + + + P EHY+C+I
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMI 490
Query: 465 DLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSG 524
DLLGRAGKL+E E FI++MP++P + W + LGAC+ H + A+ AA +LM ++P +
Sbjct: 491 DLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAAT 550
Query: 525 AHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKE 584
+V+L+N+YA R+WE++ +RK +R ++K PG SW+++ + HVF EDWSHP +E
Sbjct: 551 PYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIRE 610
Query: 585 IYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKL---LHNHSERIAVAYSLLVSPIGK 641
+ E L+ ++ ++K VGYV + +++ D+ + L +HSE++AVA+ L+ + G+
Sbjct: 611 VNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGE 670
Query: 642 PIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
++V KNLR+C DCH+A K++S V R IIVRD RFH F +G CSCGDYW
Sbjct: 671 ELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 142/313 (45%), Gaps = 9/313 (2%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAI--- 71
D +A ++ L G+Q H +LI+ G + + + L++ YSKCG D
Sbjct: 239 DMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSE 298
Query: 72 KLFDRMSKRNMVSWTAMITGFFRSLRF-REALDTFCQMRAEGETASQFALSSVLQACASL 130
K+F + ++V W MI+G+ + EA+ +F QM+ G + V AC++L
Sbjct: 299 KVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNL 358
Query: 131 GSIQFGVQVHCLVVKSGFGC-ELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSM 189
S Q+H L +KS + + + L +Y K G + DA VF+ MP + V + M
Sbjct: 359 SSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCM 418
Query: 190 IDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKS-LHAIIVKFG 248
I GY ++G+ +AL+ Y++M+ + ++ + LSAC G+ + + F
Sbjct: 419 IKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFK 478
Query: 249 FEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDG---YVEMDQLEKAL 305
E E + + DL ++G + A + V++ A++ + M E+A
Sbjct: 479 IEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAA 538
Query: 306 NAFIDLRNSGIEP 318
N + ++ P
Sbjct: 539 NELMVMQPLAATP 551
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 451 bits (1159), Expect = e-127, Method: Compositional matrix adjust.
Identities = 250/702 (35%), Positives = 389/702 (55%), Gaps = 34/702 (4%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM 82
+ CA+++ G Q+H +++ G F+ N L++ Y++CGELD A K+FD MS+RN+
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 83 VSWTAMITGFFRSLRFREALDTFCQM-RAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
VSWT+MI G+ R ++A+D F +M R E T + + V+ ACA L ++ G +V+
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
+ SG + S L DMY KC + A ++F+E + L +M YV+ G +
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
AL + M+ V D+ + S +S+C+ L+ +GKS H +++ GFE I NAL D
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 262 LYSK-------------------------------SGDMVSASNVFQSDSGCRNIVSFTA 290
+Y K +G++ +A F++ +NIVS+
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE-KNIVSWNT 439
Query: 291 IVDGYVEMDQLEKALNAFIDLRNS-GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF 349
I+ G V+ E+A+ F +++ G+ + T S+ AC + L+ ++ + K
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 350 NFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETF 409
D + + LVDM+ +CG + ++ +F+ + N + +AW +G A G AIE F
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 410 NEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGR 469
++M+++GLKP+ V FV L CSH G+V+ G FYSM K++GV P + HY C++DLLGR
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 470 AGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLL 529
AG L+E I MP EP W S L AC+ G+ E A AA K+ L PE +G++VLL
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 530 SNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKL 589
SN+YA +W D+ +R +++ ++K PG S + I +TH F D SHP I L
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
Query: 590 DSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNL 649
D + + +G+VP +VL+++D+ K +L HSE++A+AY L+ S G I + KNL
Sbjct: 740 DEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNL 799
Query: 650 RVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDY 691
RVCSDCHS K+ SKV R II+RD +RFH+ G CSCGD+
Sbjct: 800 RVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 210/443 (47%), Gaps = 13/443 (2%)
Query: 16 SKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCG---ELDYAIK 72
+KA ++ C EL K H L + G L+ + G L +A +
Sbjct: 32 TKATPSSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKE 88
Query: 73 LFDRM-SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLG 131
+F+ S + ++I G+ S EA+ F +M G + ++ L ACA
Sbjct: 89 VFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSR 148
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMID 191
+ G+Q+H L+VK G+ +LF+ ++L Y++CGE+ A KVF+EM ++ V WTSMI
Sbjct: 149 AKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMIC 208
Query: 192 GYVKNGNFEKALIAYKKMVTDNVFIDQHV-LCSTLSACTALKAFSFGKSLHAIIVKFGFE 250
GY + + A+ + +MV D V + +SAC L+ G+ ++A I G E
Sbjct: 209 GYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE 268
Query: 251 YETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID 310
+ +AL D+Y K + A +F + G N+ A+ YV +AL F
Sbjct: 269 VNDLMVSALVDMYMKCNAIDVAKRLFD-EYGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGL 370
+ +SG+ P+ + S I +C+ + G HG V++ F+ + +AL+DMY KC
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHR 387
Query: 371 FDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKG 430
D + ++FD + N WN++V + ++G A ETF M ++ N V++ ++ G
Sbjct: 388 QDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEK----NIVSWNTIISG 443
Query: 431 CSHAGMVEDGLNYFYSMDKIYGV 453
+ E+ + F SM GV
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGV 466
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 192/413 (46%), Gaps = 35/413 (8%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
+I CA+ ++L G++++A + G + + L+++Y KC +D A +LFD N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
+ AM + + R REAL F M G + ++ S + +C+ L +I +G H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
V+++GF + + L DMY KC A ++F+ M K V W S++ GYV+NG +
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 202 ALIAYKKMVTDNVF--------------------------------IDQHVLCSTLSACT 229
A ++ M N+ D + S SAC
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 230 ALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFT 289
L A K ++ I K G + + +G L D++S+ GD SA ++F S + R++ ++T
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN-RDVSAWT 540
Query: 290 AIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF 349
A + E+A+ F D+ G++P+ F + AC++ ++ G + ++K
Sbjct: 541 AAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600
Query: 350 N-FDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHG 400
+ + +VD+ G+ GL + ++QL +++ PND WN+L+ G
Sbjct: 601 HGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 154/358 (43%), Gaps = 66/358 (18%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D ++ I +C+Q + + GK H ++R G + N L+++Y KC D A ++F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 75 DRMSKR-------------------------------NMVSWTAMITGFFRSLRFREALD 103
DRMS + N+VSW +I+G + F EA++
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 104 TFCQMRA-EGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMY 162
FC M++ EG A + S+ AC LG++ ++ + K+G ++ LG+ L DM+
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515
Query: 163 SKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLC 222
S+CG+ A +F + +D WT+ I GN E+A+ + M+ + D
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575
Query: 223 STLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGC 282
L+AC+ H +V+ G E YS M+ V D
Sbjct: 576 GALTACS-----------HGGLVQQGKEI----------FYS----MLKLHGVSPED--- 607
Query: 283 RNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGS 340
V + +VD LE+A+ D+ +EPN+ ++SL+ AC Q +E +
Sbjct: 608 ---VHYGCMVDLLGRAGLLEEAVQLIEDM---PMEPNDVIWNSLLAACRVQGNVEMAA 659
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 140/301 (46%), Gaps = 16/301 (5%)
Query: 223 STLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVS------ASNVF 276
S+L C + K H + K G + + + +T L ++S ++ + A VF
Sbjct: 37 SSLKNCKTIDEL---KMFHRSLTKQGLDNDV---STITKLVARSCELGTRESLSFAKEVF 90
Query: 277 QSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKL 336
++ + +++ GY +A+ F+ + NSGI P+++TF + ACA
Sbjct: 91 ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAK 150
Query: 337 EHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVF 396
+G +HG +VK + +D FV ++LV Y +CG D + ++FDE+ N +W +++ +
Sbjct: 151 GNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGY 210
Query: 397 AQHGLGRNAIETFNEMV-DRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMP 455
A+ ++A++ F MV D + PN+VT V ++ C+ +E G Y+ + G+
Sbjct: 211 ARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETG-EKVYAFIRNSGIEV 269
Query: 456 REEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKL 515
+ + ++D+ + + + + + + C+ + + R L + L
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDE--YGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 516 M 516
M
Sbjct: 328 M 328
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/638 (37%), Positives = 369/638 (57%), Gaps = 17/638 (2%)
Query: 55 NHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET 114
N +L+ Y++ G +D A +FDRM ++N VSW A+++ + ++ + EA F
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV 220
Query: 115 ASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKV 174
+ L ++ + + QF ++ V S + + Y++ G++ +A ++
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSW--------NTIITGYAQSGKIDEARQL 272
Query: 175 FEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAF 234
F+E P +D WT+M+ GY++N E+A + KM N +L + +
Sbjct: 273 FDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQG----ERM 328
Query: 235 SFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDG 294
K L ++ N + Y++ G + A N+F R+ VS+ A++ G
Sbjct: 329 EMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEAKNLFDKMPK-RDPVSWAAMIAG 383
Query: 295 YVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRD 354
Y + +AL F+ + G N +FSS + CA+ LE G LHG++VK ++
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 443
Query: 355 PFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVD 414
FV +AL+ MY KCG + + LF E+ + +WNT++ +++HG G A+ F M
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503
Query: 415 RGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLK 474
GLKP+ T V +L CSH G+V+ G YFY+M + YGVMP +HY C++DLLGRAG L+
Sbjct: 504 EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLE 563
Query: 475 EVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYA 534
+ + + +MPFEP A W + LGA + HG+ E A+ AA K+ +EPENSG +VLLSN+YA
Sbjct: 564 DAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYA 623
Query: 535 KERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLD 594
+W DV LR +RD +KK+PGYSW++I N+TH F V D HP K EI+ L+ L
Sbjct: 624 SSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDL 683
Query: 595 QIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSD 654
++K GYV +T VL ++++ KE+++ HSER+AVAY ++ G+PI V KNLRVC D
Sbjct: 684 RMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCED 743
Query: 655 CHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
CH+A KY++++T R II+RD +RFHHF +GSCSCGDYW
Sbjct: 744 CHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 143/277 (51%), Gaps = 8/277 (2%)
Query: 48 LPCTFLT--NHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTF 105
+PC ++ N ++ Y++CG++ A LFD+M KR+ VSW AMI G+ +S EAL F
Sbjct: 338 MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLF 397
Query: 106 CQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKC 165
QM EG ++ + SS L CA + +++ G Q+H +VK G+ F+G+ L MY KC
Sbjct: 398 VQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 166 GEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTL 225
G + +A +F+EM KD V W +MI GY ++G E AL ++ M + + D + + L
Sbjct: 458 GSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVL 517
Query: 226 SACTALKAFSFGKS-LHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNV-----FQSD 279
SAC+ G+ + + +G + + DL ++G + A N+ F+ D
Sbjct: 518 SACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPD 577
Query: 280 SGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI 316
+ + + V G E+ + ++ NSG+
Sbjct: 578 AAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGM 614
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 166/402 (41%), Gaps = 91/402 (22%)
Query: 55 NHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET 114
N +++ Y + GE + A KLFD M +R++VSW MI G+ R+ R G+
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRN-------------RNLGKA 145
Query: 115 ASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKV 174
F + C+ + + Y++ G V DA V
Sbjct: 146 RELFEIMPERDVCS--------------------------WNTMLSGYAQNGCVDDARSV 179
Query: 175 FEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAF 234
F+ MP K++V W +++ YV+N E+A + +K + +L + ++A
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEAR 239
Query: 235 SFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDG 294
F S++ V+ + T I Y++SG + A +F +S +++ ++TA+V G
Sbjct: 240 QFFDSMN---VRDVVSWNTIITG-----YAQSGKIDEARQLF-DESPVQDVFTWTAMVSG 290
Query: 295 YVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRD 354
Y++ +E+A F + E NE ++++++ ++E
Sbjct: 291 YIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAK-------------- 332
Query: 355 PFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVD 414
+LFD + N + WNT++ +AQ G A F++M
Sbjct: 333 ---------------------ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPK 371
Query: 415 RGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPR 456
R + V++ ++ G S +G + L F M++ G + R
Sbjct: 372 R----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 7/213 (3%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM 82
+ TCA L GKQLH +L++GG F+ N LL +Y KCG ++ A LF M+ +++
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 83 VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ-VHC 141
VSW MI G+ R AL F M+ EG + +VL AC+ G + G Q +
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYT 535
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMIDGYVKNGNFE 200
+ G + + D+ + G + DA + + MP + D +W +++ +GN E
Sbjct: 536 MTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTE 595
Query: 201 KALIAYKK---MVTDNVFIDQHVLCSTLSACTA 230
A A K M +N + +VL S L A +
Sbjct: 596 LAETAADKIFAMEPENSGM--YVLLSNLYASSG 626
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 148/353 (41%), Gaps = 49/353 (13%)
Query: 162 YSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKM-----VTDNVFI 216
Y + G ++A +VF+ MP V + MI GY++NG FE A + +M V+ NV I
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMI 133
Query: 217 DQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVF 276
+V L + L I+ E + N + Y+++G + A +VF
Sbjct: 134 KGYVRNRNLGK---------ARELFEIMP----ERDVCSWNTMLSGYAQNGCVDDARSVF 180
Query: 277 QSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKL 336
+N VS+ A++ YV+ ++E+A F N + +++ L+ + K+
Sbjct: 181 DRMPE-KNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKKKI 235
Query: 337 EHGSLLHGQVVKFNFD----RDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTL 392
FD RD + ++ Y + G D + QLFDE + W +
Sbjct: 236 VEARQF--------FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAM 287
Query: 393 VGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYG 452
V + Q+ + A E F++M +R N V++ +L G +E +++
Sbjct: 288 VSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERME-------MAKELFD 336
Query: 453 VMP--REEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHG 503
VMP +N +I + GK+ E ++ + MP + W + + G
Sbjct: 337 VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSG 388
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 257/766 (33%), Positives = 395/766 (51%), Gaps = 110/766 (14%)
Query: 32 LSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK------------ 79
L + +H +I G P + N L+++Y K EL+YA +LFD +S+
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 80 ---------------------RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQF 118
R+ V + AMITGF + A++ FC+M+ EG F
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 119 ALSSVLQACASLGSIQFG-VQVHCLVVKSGFGCELFLGSNLTDMYSKCGE----VSDACK 173
+SVL A + + VQ H +KSG G + + L +YSKC + A K
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 174 VFEEMPCKDEVLWTSMIDGYVKNGNFEKA------------LIAY--------------- 206
VF+E+ KDE WT+M+ GYVKNG F+ L+AY
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQE 269
Query: 207 -----KKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVK---FGFEYETFIGNA 258
++MV+ + +D+ S + AC GK +HA +++ F F ++ N+
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----NS 325
Query: 259 LTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQL----------------- 301
L LY K G A +F+ +++VS+ A++ GYV +
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPA-KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384
Query: 302 --------------EKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVV 347
E+ L F ++ G EP ++ FS IK+CA +G H Q++
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL 444
Query: 348 KFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIE 407
K FD +AL+ MY KCG+ + + Q+F + + +WN L+ QHG G A++
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVD 504
Query: 408 TFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLL 467
+ EM+ +G++P+ +T + +L CSHAG+V+ G YF SM+ +Y + P +HY +IDLL
Sbjct: 505 VYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLL 564
Query: 468 GRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHV 527
R+GK + E I S+PF+PTA W + L C+ HG+ E +AA KL L PE+ G ++
Sbjct: 565 CRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYM 624
Query: 528 LLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYE 587
LLSN++A QWE+V +RK++RD +KK SW+++ + H F V+D SHP + +Y
Sbjct: 625 LLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYI 684
Query: 588 KLDSLLDQIKIVGYVPQTESVLIEMD-DTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVK 646
L L +++ +GYVP T VL +++ D KE +L HSE+IAVA+ L+ P G I +
Sbjct: 685 YLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIF 744
Query: 647 KNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
KNLR C DCH+ F+++S V +R+II+RD RFHHF NG CSCG++W
Sbjct: 745 KNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 144/307 (46%), Gaps = 55/307 (17%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D +I+ CA A L GKQ+HA ++R F N L++LY KCG+ D A +F
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIF 343
Query: 75 DRMSKRNMVSWTAMITGFFRS-------LRFR------------------------EALD 103
++M +++VSW A+++G+ S L F+ E L
Sbjct: 344 EKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLK 403
Query: 104 TFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYS 163
F M+ EG +A S +++CA LG+ G Q H ++K GF L G+ L MY+
Sbjct: 404 LFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYA 463
Query: 164 KCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCS 223
KCG V +A +VF MPC D V W ++I ++G+ +A+ Y++M+ + D+ L +
Sbjct: 464 KCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLT 523
Query: 224 TLSACTALKAFSFGKSLHAIIVKFGFEY----ETFIG--------NALTDLYSKSGDMVS 271
L+AC+ HA +V G +Y ET L DL +SG
Sbjct: 524 VLTACS-----------HAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSD 572
Query: 272 ASNVFQS 278
A +V +S
Sbjct: 573 AESVIES 579
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 14/225 (6%)
Query: 14 CDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKL 73
CD A + I++CA G+Q HAQL++ G N L+ +Y+KCG ++ A ++
Sbjct: 416 CDY-AFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQV 474
Query: 74 FDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSI 133
F M + VSW A+I + EA+D + +M +G + L +VL AC+ G +
Sbjct: 475 FRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLV 534
Query: 134 QFGVQVHC---LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEV-LWTSM 189
G + V + G + + + L D+ + G+ SDA V E +P K +W ++
Sbjct: 535 DQGRKYFDSMETVYRIPPGADHY--ARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEAL 592
Query: 190 IDGYVKNGNFEKALIAYKKMVTDNVFIDQH----VLCSTLSACTA 230
+ G +GN E +IA K+ I +H +L S + A T
Sbjct: 593 LSGCRVHGNMELGIIAADKLFG---LIPEHDGTYMLLSNMHAATG 634
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/630 (36%), Positives = 369/630 (58%), Gaps = 11/630 (1%)
Query: 73 LFDR-MSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLG 131
LF+R + K ++ SW ++I RS EAL F MR ++ + ++AC+SL
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMID 191
I G Q H G+ ++F+ S L MYS CG++ DA KVF+E+P ++ V WTSMI
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 192 GYVKNGNFEKALIAYKKMVTDN------VFIDQHVLCSTLSACTALKAFSFGKSLHAIIV 245
GY NGN A+ +K ++ D +F+D L S +SAC+ + A +S+H+ ++
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 246 KFGFEYETFIGNALTDLYSKSGD--MVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEK 303
K GF+ +GN L D Y+K G+ + A +F ++ VS+ +I+ Y + +
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVD-KDRVSYNSIMSVYAQSGMSNE 269
Query: 304 ALNAFIDL-RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALV 362
A F L +N + N T S+++ A ++ L G +H QV++ + D V ++++
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329
Query: 363 DMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAV 422
DMY KCG + + + FD ++N N +W ++ + HG A+E F M+D G++PN +
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389
Query: 423 TFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINS 482
TFV++L CSHAG+ +G +F +M +GV P EHY C++DLLGRAG L++ D I
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449
Query: 483 MPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDV 542
M +P + W S L AC+ H + E A+++ +L +L+ N G ++LLS+IYA +W+DV
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDV 509
Query: 543 RCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYV 602
+R ++++ + K PG+S +++ E HVF + D HP++++IYE L L ++ GYV
Sbjct: 510 ERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV 569
Query: 603 PQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYI 662
T SV ++D+ KE L HSE++A+A+ ++ + G + V KNLRVCSDCH+ K I
Sbjct: 570 SNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLI 629
Query: 663 SKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
SK+ +R +VRD RFHHF +G CSCGDYW
Sbjct: 630 SKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 195/389 (50%), Gaps = 14/389 (3%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM 82
I+ C+ ++ GKQ H Q G F+++ L+ +YS CG+L+ A K+FD + KRN+
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 83 VSWTAMITGFFRSLRFREALDTFCQMRAEGET------ASQFALSSVLQACASLGSIQFG 136
VSWT+MI G+ + +A+ F + + L SV+ AC+ + +
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202
Query: 137 VQVHCLVVKSGFGCELFLGSNLTDMYSKCGE--VSDACKVFEEMPCKDEVLWTSMIDGYV 194
+H V+K GF + +G+ L D Y+K GE V+ A K+F+++ KD V + S++ Y
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCST-LSACTALKAFSFGKSLHAIIVKFGFEYET 253
++G +A ++++V + V + ST L A + A GK +H +++ G E +
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
+G ++ D+Y K G + +A F +N+ S+TA++ GY KAL F + +
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKN-KNVRSWTAMIAGYGMHGHAAKALELFPAMID 381
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLF 371
SG+ PN TF S++ AC+ A L +K F +P + +VD+ G+ G
Sbjct: 382 SGVRPNYITFVSVLAACS-HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 440
Query: 372 DHSIQLFDEIE-NPNDTAWNTLVGVFAQH 399
+ L ++ P+ W++L+ H
Sbjct: 441 QKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 139/267 (52%), Gaps = 4/267 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAI--K 72
DS + +I C++ + +H+ +I+ G + N LL+ Y+K GE A+ K
Sbjct: 182 DSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARK 241
Query: 73 LFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQM-RAEGETASQFALSSVLQACASLG 131
+FD++ ++ VS+ ++++ + +S EA + F ++ + + T + LS+VL A + G
Sbjct: 242 IFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG 301
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMID 191
+++ G +H V++ G ++ +G+++ DMY KCG V A K F+ M K+ WT+MI
Sbjct: 302 ALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIA 361
Query: 192 GYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFG-KSLHAIIVKFGFE 250
GY +G+ KAL + M+ V + S L+AC+ G + +A+ +FG E
Sbjct: 362 GYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVE 421
Query: 251 YETFIGNALTDLYSKSGDMVSASNVFQ 277
+ DL ++G + A ++ Q
Sbjct: 422 PGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 4/209 (1%)
Query: 4 RNLFRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSK 63
R L + + ++ ++ ++ + + L GK +H Q+IR G + ++++Y K
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334
Query: 64 CGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSV 123
CG ++ A K FDRM +N+ SWTAMI G+ +AL+ F M G + SV
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394
Query: 124 LQACASLGSIQFGVQVHCLVVKSGFGCELFLGSN--LTDMYSKCGEVSDACKVFEEMPCK 181
L AC+ G G + +K FG E L + D+ + G + A + + M K
Sbjct: 395 LAACSHAGLHVEGWRWFN-AMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 182 -DEVLWTSMIDGYVKNGNFEKALIAYKKM 209
D ++W+S++ + N E A I+ ++
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARL 482
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 444 bits (1143), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/679 (34%), Positives = 383/679 (56%), Gaps = 2/679 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS + + ++ + + + G+QLH +++ G + N L+ Y K +D A K+F
Sbjct: 194 DSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVF 253
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
D M++R+++SW ++I G+ + + L F QM G + SV CA I
Sbjct: 254 DEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLIS 313
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G VH + VK+ F E + L DMYSKCG++ A VF EM + V +TSMI GY
Sbjct: 314 LGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA 373
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+ G +A+ +++M + + D + + + L+ C + GK +H I + ++ F
Sbjct: 374 REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIF 433
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAF-IDLRN 313
+ NAL D+Y+K G M A VF S+ ++I+S+ I+ GY + +AL+ F + L
Sbjct: 434 VSNALMDMYAKCGSMQEAELVF-SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEE 492
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
P+E T + ++ ACA+ + + G +HG +++ + D V+++LVDMY KCG
Sbjct: 493 KRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLL 552
Query: 374 SIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSH 433
+ LFD+I + + +W ++ + HG G+ AI FN+M G++ + ++FV+LL CSH
Sbjct: 553 AHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSH 612
Query: 434 AGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWC 493
+G+V++G +F M + P EHY CI+D+L R G L + FI +MP P A W
Sbjct: 613 SGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWG 672
Query: 494 SFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGN 553
+ L C+ H D + A+ A K+ +LEPEN+G +VL++NIYA+ +WE V+ LRK I
Sbjct: 673 ALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRG 732
Query: 554 MKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMD 613
++K PG SW++I ++F D S+P + I L + ++ GY P T+ LI+ +
Sbjct: 733 LRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAE 792
Query: 614 DTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVR 673
+ KE+ L HSE++A+A ++ S GK I V KNLRVC DCH K++SK+T R I++R
Sbjct: 793 EMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLR 852
Query: 674 DISRFHHFSNGSCSCGDYW 692
D +RFH F +G CSC +W
Sbjct: 853 DSNRFHQFKDGHCSCRGFW 871
Score = 233 bits (593), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 152/532 (28%), Positives = 268/532 (50%), Gaps = 27/532 (5%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRG-GCLPCTFLTNHLLNLYSKCGELDYAIKL 73
D + + ++Q CA +K L GK++ IRG G + + L + L +Y+ CG+L A ++
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVD-NFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 74 FDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSI 133
FD + + W ++ +S F ++ F +M + G + S V ++ +SL S+
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
G Q+H ++KSGFG +G++L Y K V A KVF+EM +D + W S+I+GY
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
V NG EK L + +M+ + ID + S + C + S G+++H+I VK F E
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
N L D+YSK GD+ SA VF+ S R++VS+T+++ GY +A+ F ++
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSD-RSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
GI P+ +T ++++ CA L+ G +H + + + D FVS+AL+DMY KCG
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 374 SIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMV-DRGLKPNAVTFVNLLKGCS 432
+ +F E+ + +WNT++G ++++ A+ FN ++ ++ P+ T +L C+
Sbjct: 451 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 510
Query: 433 HAGMVEDGLNYFYSMDKIYGVMPREEHY------NCIIDLLGRAGKLKEVEDFINSMPFE 486
L+ F +I+G + R ++ N ++D+ + G L + M F+
Sbjct: 511 -------SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL-----LLAHMLFD 558
Query: 487 PTA----FGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYA 534
A W + HG + A +A + M+ + +S +YA
Sbjct: 559 DIASKDLVSWTVMIAGYGMHGFGKEA-IALFNQMRQAGIEADEISFVSLLYA 609
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 141/292 (48%), Gaps = 6/292 (2%)
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
+ ++GN E A+ V+ ID LCS L C K+ GK + I GF +
Sbjct: 71 FCESGNLENAVKLL--CVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVID 128
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR 312
+ +G+ L+ +Y+ GD+ AS VF + + + +++ + ++ F +
Sbjct: 129 SNLGSKLSLMYTNCGDLKEASRVFD-EVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187
Query: 313 NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
+SG+E + +TFS + K+ ++ + G LHG ++K F V ++LV Y K D
Sbjct: 188 SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD 247
Query: 373 HSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
+ ++FDE+ + +WN+++ + +GL + F +M+ G++ + T V++ GC+
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307
Query: 433 HAGMVEDGLNYFYSMDKIYGVMPREEHY-NCIIDLLGRAGKLKEVEDFINSM 483
+ ++ G +S+ + RE+ + N ++D+ + G L + M
Sbjct: 308 DSRLISLG-RAVHSIG-VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM 357
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/584 (39%), Positives = 345/584 (59%), Gaps = 1/584 (0%)
Query: 109 RAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEV 168
R E +++ + +LQ CA G++ H +++ ++ L + L + YSKCG V
Sbjct: 53 RYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFV 112
Query: 169 SDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSAC 228
A +VF+ M + V W +MI Y +N +AL + +M + + + S LSAC
Sbjct: 113 ELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
Query: 229 TALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSF 288
K LH + VK + ++G AL DLY+K G + A VF+S ++ V++
Sbjct: 173 GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQD-KSSVTW 231
Query: 289 TAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVK 348
+++V GYV+ E+AL + + +E N+FT SS+I AC+N A L G +H + K
Sbjct: 232 SSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK 291
Query: 349 FNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIET 408
F + FV+S+ VDMY KCG S +F E++ N WNT++ FA+H + +
Sbjct: 292 SGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMIL 351
Query: 409 FNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLG 468
F +M G+ PN VTF +LL C H G+VE+G +F M YG+ P HY+C++D+LG
Sbjct: 352 FEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILG 411
Query: 469 RAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVL 528
RAG L E + I S+PF+PTA W S L +C+ + + E A++AA KL +LEPEN+G HVL
Sbjct: 412 RAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVL 471
Query: 529 LSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEK 588
LSNIYA +QWE++ RK++RD ++KK+ G SW+DI ++ H F V + HPR +EI
Sbjct: 472 LSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICST 531
Query: 589 LDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKN 648
LD+L+ + + GY P E L +++ KE+LL HSE++A+ + L+ P P+ + KN
Sbjct: 532 LDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKN 591
Query: 649 LRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
LR+C DCH K S T R IIVRD++RFHHFS+G CSCGD+W
Sbjct: 592 LRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/411 (32%), Positives = 226/411 (54%), Gaps = 8/411 (1%)
Query: 8 RFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGEL 67
R+ ++ + V +++Q CA+ + + K H ++IR L N L+N YSKCG +
Sbjct: 53 RYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFV 112
Query: 68 DYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQAC 127
+ A ++FD M +R++VSW MI + R+ EALD F +MR EG S+F +SSVL AC
Sbjct: 113 ELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
Query: 128 ASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWT 187
++HCL VK+ L++G+ L D+Y+KCG + DA +VFE M K V W+
Sbjct: 173 GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWS 232
Query: 188 SMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKF 247
SM+ GYV+N N+E+AL+ Y++ ++ +Q L S + AC+ L A GK +HA+I K
Sbjct: 233 SMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKS 292
Query: 248 GFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNA 307
GF F+ ++ D+Y+K G + + +F S+ +N+ + I+ G+ + + ++ +
Sbjct: 293 GFGSNVFVASSAVDMYAKCGSLRESYIIF-SEVQEKNLELWNTIISGFAKHARPKEVMIL 351
Query: 308 FIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMY 365
F ++ G+ PNE TFSSL+ C + +E G ++++ + P V S +VD+
Sbjct: 352 FEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDIL 410
Query: 366 GKCGLFDHSIQLFDEIE-NPNDTAWNTLVG---VFAQHGLGRNAIETFNEM 412
G+ GL + +L I +P + W +L+ V+ L A E E+
Sbjct: 411 GRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFEL 461
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 251/707 (35%), Positives = 391/707 (55%), Gaps = 40/707 (5%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLN---LYSKCGELDYAIKLFDRMS 78
L+ C K L + +HAQ+I+ G + + L+ L L YAI +F +
Sbjct: 39 LLHNC---KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 95
Query: 79 KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ 138
+ N++ W M G S AL + M + G + + VL++CA + + G Q
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKV------------------------ 174
+H V+K G +L++ ++L MY + G + DA KV
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 175 -------FEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSA 227
F+E+P KD V W +MI GY + GN+++AL +K M+ NV D+ + + +SA
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 228 CTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVS 287
C + G+ +H I GF I NAL DLYSK G++ +A +F+ ++++S
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP-YKDVIS 334
Query: 288 FTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVV 347
+ ++ GY M+ ++AL F ++ SG PN+ T S++ ACA+ ++ G +H +
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 348 KF--NFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNA 405
K + ++L+DMY KCG + + Q+F+ I + + ++WN ++ FA HG +
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 454
Query: 406 IETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIID 465
+ F+ M G++P+ +TFV LL CSH+GM++ G + F +M + Y + P+ EHY C+ID
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMID 514
Query: 466 LLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGA 525
LLG +G KE E+ IN M EP WCS L ACK HG+ E + A L+K+EPEN G+
Sbjct: 515 LLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGS 574
Query: 526 HVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEI 585
+VLLSNIYA +W +V R ++ D MKK+PG S ++I + H F + D HPR +EI
Sbjct: 575 YVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 634
Query: 586 YEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIV 645
Y L+ + ++ G+VP T VL EM++ KE L +HSE++A+A+ L+ + G + +
Sbjct: 635 YGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTI 694
Query: 646 KKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
KNLRVC +CH A K ISK+ +R II RD +RFHHF +G CSC DYW
Sbjct: 695 VKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 117/228 (51%), Gaps = 2/228 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + ++ CAQ+ + G+Q+H + G + N L++LYSKCGEL+ A LF
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+R+ ++++SW +I G+ ++EAL F +M GET + + S+L ACA LG+I
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Query: 135 FGVQVHCLVVK--SGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDG 192
G +H + K G L ++L DMY+KCG++ A +VF + K W +MI G
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSL 240
+ +G + + + +M + D LSAC+ G+ +
Sbjct: 445 FAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 441 bits (1135), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/674 (35%), Positives = 368/674 (54%), Gaps = 13/674 (1%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
L + C + + LS G+ LH ++ G P L N +L +Y +C L+ A KLFD MS+ N
Sbjct: 89 LFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELN 148
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
VS T MI+ + +A+ F M A G+ +++L++ + ++ FG Q+H
Sbjct: 149 AVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHA 208
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
V+++G + + + +MY KCG + A +VF++M K V T ++ GY + G
Sbjct: 209 HVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARD 268
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
AL + +VT+ V D V L AC +L+ + GK +HA + K G E E +G L D
Sbjct: 269 ALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVD 328
Query: 262 LYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEP-NE 320
Y K SA FQ N VS++AI+ GY +M Q E+A+ F LR+ N
Sbjct: 329 FYIKCSSFESACRAFQEIRE-PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNS 387
Query: 321 FTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDE 380
FT++S+ +AC+ A G +H +K + + SAL+ MY KCG D + ++F+
Sbjct: 388 FTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFES 447
Query: 381 IENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG 440
++NP+ AW + A +G A+ F +MV G+KPN+VTF+ +L CSHAG+VE G
Sbjct: 448 MDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQG 507
Query: 441 LNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACK 500
+ +M + Y V P +HY+C+ID+ R+G L E F+ +MPFEP A W FL C
Sbjct: 508 KHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCW 567
Query: 501 THGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGY 560
TH + E ++A +L +L+PE++ +VL N+Y +WE+ + K++ + +KK
Sbjct: 568 THKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSC 627
Query: 561 SWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKL 620
SW+ + H F V D HP+ +EIYEKL + G++ E + + + T + +
Sbjct: 628 SWIQEKGKIHRFIVGDKHHPQTQEIYEKLK------EFDGFM---EGDMFQCNMTERREQ 678
Query: 621 LHNHSERIAVAYSLLV--SPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRF 678
L +HSER+A+A+ L+ PI V KNLR C DCH K++S VT I++RD RF
Sbjct: 679 LLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRF 738
Query: 679 HHFSNGSCSCGDYW 692
HHF G CSC DYW
Sbjct: 739 HHFKEGKCSCNDYW 752
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 196/377 (51%), Gaps = 4/377 (1%)
Query: 16 SKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFD 75
S L+++ + L G+Q+HA +IR G T + ++N+Y KCG L A ++FD
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 76 RMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQF 135
+M+ + V+ T ++ G+ ++ R R+AL F + EG F S VL+ACASL +
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL 303
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVK 195
G Q+H V K G E+ +G+ L D Y KC AC+ F+E+ ++V W+++I GY +
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 363
Query: 196 NGNFEKALIAYKKMVTDNVFI-DQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
FE+A+ +K + + N I + S AC+ L + G +HA +K +
Sbjct: 364 MSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 423
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+AL +YSK G + A+ VF+S +IV++TA + G+ +AL F + +
Sbjct: 424 GESALITMYSKCGCLDDANEVFESMDN-PDIVAWTAFISGHAYYGNASEALRLFEKMVSC 482
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGS-LLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
G++PN TF +++ AC++ +E G L + K+N ++D+Y + GL D
Sbjct: 483 GMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDE 542
Query: 374 SIQLFDEIE-NPNDTAW 389
+++ + P+ +W
Sbjct: 543 ALKFMKNMPFEPDAMSW 559
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 134/255 (52%), Gaps = 2/255 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS + +++ CA +EL+ GKQ+HA + + G + L++ Y KC + A + F
Sbjct: 284 DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAF 343
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETA-SQFALSSVLQACASLGSI 133
+ + N VSW+A+I+G+ + +F EA+ TF +R++ + + F +S+ QAC+ L
Sbjct: 344 QEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADC 403
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
G QVH +K + S L MYSKCG + DA +VFE M D V WT+ I G+
Sbjct: 404 NIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGH 463
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKS-LHAIIVKFGFEYE 252
GN +AL ++KMV+ + + + L+AC+ GK L ++ K+
Sbjct: 464 AYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPT 523
Query: 253 TFIGNALTDLYSKSG 267
+ + D+Y++SG
Sbjct: 524 IDHYDCMIDIYARSG 538
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 6/201 (2%)
Query: 13 LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIK 72
+ +S + Q C+ + + G Q+HA I+ + + + L+ +YSKCG LD A +
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANE 443
Query: 73 LFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGS 132
+F+ M ++V+WTA I+G EAL F +M + G + +VL AC+ G
Sbjct: 444 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 503
Query: 133 IQFGVQVHCL---VVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVLWTS 188
++ G HCL + K + + D+Y++ G + +A K + MP + D + W
Sbjct: 504 VEQG--KHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKC 561
Query: 189 MIDGYVKNGNFEKALIAYKKM 209
+ G + N E IA +++
Sbjct: 562 FLSGCWTHKNLELGEIAGEEL 582
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 66/130 (50%)
Query: 300 QLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS 359
+L +A ++ +G+ + +++ L +AC L HG LLH ++ + + +
Sbjct: 63 KLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQN 122
Query: 360 ALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKP 419
++ MY +C + + +LFDE+ N + T++ +A+ G+ A+ F+ M+ G KP
Sbjct: 123 CVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP 182
Query: 420 NAVTFVNLLK 429
+ + LLK
Sbjct: 183 PSSMYTTLLK 192
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/677 (33%), Positives = 375/677 (55%), Gaps = 1/677 (0%)
Query: 16 SKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFD 75
+ V Q+ + A ++ KQ+H LI TFL N LL + Y+ LF
Sbjct: 10 TSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFS 69
Query: 76 RMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQF 135
N+ + ++I GF + F E LD F +R G F VL+AC S +
Sbjct: 70 HTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKL 129
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVK 195
G+ +H LVVK GF ++ ++L +YS G ++DA K+F+E+P + V WT++ GY
Sbjct: 130 GIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTT 189
Query: 196 NGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFI 255
+G +A+ +KKMV V D + + LSAC + G+ + + + + +F+
Sbjct: 190 SGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV 249
Query: 256 GNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSG 315
L +LY+K G M A +VF S ++IV+++ ++ GY ++ + F+ +
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSMVE-KDIVTWSTMIQGYASNSFPKEGIELFLQMLQEN 308
Query: 316 IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSI 375
++P++F+ + +CA+ L+ G + + F + F+++AL+DMY KCG
Sbjct: 309 LKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGF 368
Query: 376 QLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAG 435
++F E++ + N + A++G + + F + G+ P+ TF+ LL GC HAG
Sbjct: 369 EVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAG 428
Query: 436 MVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSF 495
+++DGL +F ++ +Y + EHY C++DL GRAG L + I MP P A W +
Sbjct: 429 LIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGAL 488
Query: 496 LGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMK 555
L C+ D + A+ +L+ LEP N+G +V LSNIY+ +W++ +R M+ MK
Sbjct: 489 LSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMK 548
Query: 556 KLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDT 615
K+PGYSW+++ + H F +D SHP +IY KL+ L ++++++G+VP TE V ++++
Sbjct: 549 KIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEE 608
Query: 616 LKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDI 675
KE++L HSE++AVA L+ + G+ I V KNLRVC DCH K ISK+T R I+VRD
Sbjct: 609 EKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDN 668
Query: 676 SRFHHFSNGSCSCGDYW 692
+RFH F+NGSCSC DYW
Sbjct: 669 NRFHCFTNGSCSCNDYW 685
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 86/187 (45%), Gaps = 16/187 (8%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D ++ + +CA L G+ + + R L F+ N L+++Y+KCG + ++F
Sbjct: 312 DQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVF 371
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
M ++++V A I+G ++ + + F Q G + +L C G IQ
Sbjct: 372 KEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQ 431
Query: 135 FGVQ----VHCLV----VKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVL 185
G++ + C+ +GC + D++ + G + DA ++ +MP + + ++
Sbjct: 432 DGLRFFNAISCVYALKRTVEHYGC-------MVDLWGRAGMLDDAYRLICDMPMRPNAIV 484
Query: 186 WTSMIDG 192
W +++ G
Sbjct: 485 WGALLSG 491
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/598 (37%), Positives = 348/598 (58%), Gaps = 6/598 (1%)
Query: 97 RFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGS 156
R +EAL +M G ++L AC +++ G +VH ++K+ + +L +
Sbjct: 35 RLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRT 91
Query: 157 NLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFI 216
L Y KC + DA KV +EMP K+ V WT+MI Y + G+ +AL + +M+ +
Sbjct: 92 RLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKP 151
Query: 217 DQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVF 276
++ + L++C GK +H +IVK+ ++ F+G++L D+Y+K+G + A +F
Sbjct: 152 NEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIF 211
Query: 277 QSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKL 336
+ R++VS TAI+ GY ++ E+AL F L + G+ PN T++SL+ A + A L
Sbjct: 212 ECLPE-RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALL 270
Query: 337 EHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVF 396
+HG H V++ + ++L+DMY KCG ++ +LFD + +WN ++ +
Sbjct: 271 DHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGY 330
Query: 397 AQHGLGRNAIETFNEMVD-RGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSM-DKIYGVM 454
++HGLGR +E F M D + +KP+AVT + +L GCSH M + GLN F M YG
Sbjct: 331 SKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTK 390
Query: 455 PREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYK 514
P EHY CI+D+LGRAG++ E +FI MP +PTA S LGAC+ H + + +
Sbjct: 391 PGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRR 450
Query: 515 LMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGV 574
L+++EPEN+G +V+LSN+YA +W DV +R M+ + K PG SW+ H F
Sbjct: 451 LIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHA 510
Query: 575 EDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSL 634
D +HPR++E+ K+ + ++K GYVP VL ++D+ KEK+L HSE++A+ + L
Sbjct: 511 NDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGL 570
Query: 635 LVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
+ + G PI V KNLR+C DCH+ K SKV ER + +RD +RFH +G CSCGDYW
Sbjct: 571 IATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 203/401 (50%), Gaps = 12/401 (2%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
L+ C + L G+++HA +I+ LP T+L LL Y KC L+ A K+ D M ++N
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
+VSWTAMI+ + ++ EAL F +M ++F ++VL +C + G Q+H
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
L+VK + +F+GS+L DMY+K G++ +A ++FE +P +D V T++I GY + G E+
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
AL + ++ ++ + + S L+A + L GK H +++ + + N+L D
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 262 LYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSG-IEPNE 320
+YSK G++ A +F + R +S+ A++ GY + + L F +R+ ++P+
Sbjct: 298 MYSKCGNLSYARRLFDNMPE-RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 356
Query: 321 FTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFDHSIQLF 378
T +++ C++ + G + +V + P +VDM G+ G D + +
Sbjct: 357 VTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFI 416
Query: 379 DEIEN-PNDTAWNTLVGVFAQH-------GLGRNAIETFNE 411
+ + P +L+G H +GR IE E
Sbjct: 417 KRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPE 457
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 120/211 (56%), Gaps = 1/211 (0%)
Query: 20 AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK 79
A ++ +C +A L GKQ+H +++ F+ + LL++Y+K G++ A ++F+ + +
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQV 139
R++VS TA+I G+ + EAL+ F ++ +EG + + +S+L A + L + G Q
Sbjct: 217 RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQA 276
Query: 140 HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNF 199
HC V++ L ++L DMYSKCG +S A ++F+ MP + + W +M+ GY K+G
Sbjct: 277 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLG 336
Query: 200 EKALIAYKKMVTD-NVFIDQHVLCSTLSACT 229
+ L ++ M + V D L + LS C+
Sbjct: 337 REVLELFRLMRDEKRVKPDAVTLLAVLSGCS 367
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/529 (40%), Positives = 332/529 (62%), Gaps = 6/529 (1%)
Query: 168 VSDACKVFEEMPCKDEV-LWTSMIDGYVKNGNFEKALIAYKKM-VTDNVFIDQHVLCSTL 225
+S A KVF ++ V +W ++I GY + GN A Y++M V+ V D H +
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 226 SACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNI 285
A T + G+++H+++++ GF ++ N+L LY+ GD+ SA VF +++
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE-KDL 187
Query: 286 VSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQ 345
V++ ++++G+ E + E+AL + ++ + GI+P+ FT SL+ ACA L G +H
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVY 247
Query: 346 VVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNA 405
++K R+ S+ L+D+Y +CG + + LFDE+ + N +W +L+ A +G G+ A
Sbjct: 248 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 406 IETFNEM-VDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCII 464
IE F M GL P +TFV +L CSH GMV++G YF M + Y + PR EH+ C++
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 465 DLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSG 524
DLL RAG++K+ ++I SMP +P W + LGAC HGD + A+ A ++++LEP +SG
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSG 427
Query: 525 AHVLLSNIYAKERQWEDVRCLRK-MIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKK 583
+VLLSN+YA E++W DV+ +RK M+RDG +KK+PG+S V++GN H F + D SHP+
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDG-VKKVPGHSLVEVGNRVHEFLMGDKSHPQSD 486
Query: 584 EIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPI 643
IY KL + +++ GYVPQ +V +++++ KE + HSE+IA+A+ L+ +P PI
Sbjct: 487 AIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPI 546
Query: 644 IVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
V KNLRVC+DCH A K +SKV R I+VRD SRFHHF NGSCSC DYW
Sbjct: 547 TVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 195/389 (50%), Gaps = 13/389 (3%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGC-LPCTFLTNHL---LNLYSKCGELDYAIKLFDRM 77
L+QT ++K +Q+HA IR G + L HL L + YA K+F ++
Sbjct: 21 LLQTYG-VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKI 79
Query: 78 SKR-NMVSWTAMITGFFRSLRFREALDTFCQMRAEGET-ASQFALSSVLQACASLGSIQF 135
K N+ W +I G+ A + +MR G +++A ++ ++
Sbjct: 80 EKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRL 139
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVK 195
G +H +V++SGFG +++ ++L +Y+ CG+V+ A KVF++MP KD V W S+I+G+ +
Sbjct: 140 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 199
Query: 196 NGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFI 255
NG E+AL Y +M + + D + S LSAC + A + GK +H ++K G
Sbjct: 200 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 259
Query: 256 GNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS- 314
N L DLY++ G + A +F + +N VS+T+++ G ++A+ F + ++
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFD-EMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFD 372
G+ P E TF ++ AC++ ++ G + + ++ + +P + +VD+ + G
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEG-FEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 377
Query: 373 HSIQLFDEIE-NPNDTAWNTLVGVFAQHG 400
+ + + PN W TL+G HG
Sbjct: 378 KAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 131/238 (55%), Gaps = 12/238 (5%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ LI+ ++ G+ +H+ +IR G ++ N LL+LY+ CG++ A K+F
Sbjct: 120 DTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVF 179
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
D+M ++++V+W ++I GF + + EAL + +M ++G F + S+L ACA +G++
Sbjct: 180 DKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALT 239
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G +VH ++K G L + L D+Y++CG V +A +F+EM K+ V WTS+I G
Sbjct: 240 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299
Query: 195 KNGNFEKALIAYKKM-VTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEY 251
NG ++A+ +K M T+ + + L AC+ H +VK GFEY
Sbjct: 300 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS-----------HCGMVKEGFEY 346
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/682 (33%), Positives = 382/682 (56%), Gaps = 9/682 (1%)
Query: 19 VAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS 78
+ +++ C + +G Q+H L++ G +N+L+++Y KC E A K+FD M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 79 KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ 138
+RN+VSW+A+++G + + +L F +M +G ++F S+ L+AC L +++ G+Q
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGN 198
+H +K GF + +G++L DMYSKCG +++A KVF + + + W +MI G+V G
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 199 FEKALIAYKKMVTDNV--FIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFE--YETF 254
KAL + M N+ D+ L S L AC++ GK +H +V+ GF
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
I +L DLY K G + SA F + ++S+++++ GY + + +A+ F L+
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIKE-KTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
+ + F SS+I A+ A L G + VK + V +++VDMY KCGL D +
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 367
Query: 375 IQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHA 434
+ F E++ + +W ++ + +HGLG+ ++ F EM+ ++P+ V ++ +L CSH+
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427
Query: 435 GMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCS 494
GM+++G F + + +G+ PR EHY C++DLLGRAG+LKE + I++MP +P W +
Sbjct: 428 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 487
Query: 495 FLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNM 554
L C+ HGD E K L++++ +N +V++SN+Y + W + R++ +
Sbjct: 488 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 547
Query: 555 KKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIK-IVGYVPQTESVLIEMD 613
KK G SWV+I E H F + SHP I E L +++ +GYV + L ++D
Sbjct: 548 KKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDID 607
Query: 614 DTLKEKLLHNHSERIAVAYSLLVSPI---GKPIIVKKNLRVCSDCHSAFKYISKVTERNI 670
D KE+ L HSE++A+ +L + GK I V KNLRVC DCH K +SK+T+
Sbjct: 608 DESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAY 667
Query: 671 IVRDISRFHHFSNGSCSCGDYW 692
+VRD RFH F +G CSCGDYW
Sbjct: 668 VVRDAVRFHSFEDGCCSCGDYW 689
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 176/360 (48%), Gaps = 37/360 (10%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGG--CLPCTFLTNHLLNLYSKCGELDYAIK 72
D + L++ C+ + GKQ+H L+R G C +T L++LY KCG L A K
Sbjct: 209 DEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARK 268
Query: 73 LFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGS 132
FD++ ++ M+SW+++I G+ + F EA+ F +++ FALSS++ A
Sbjct: 269 AFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFAL 328
Query: 133 IQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDG 192
++ G Q+ L VK G E + +++ DMY KCG V +A K F EM KD + WT +I G
Sbjct: 329 LRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITG 388
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
Y K+G +K++ + +M+ N+ D+ + LSAC+ H+ ++K G E
Sbjct: 389 YGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS-----------HSGMIKEGEE-- 435
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR 312
L+SK + ++ + + +VD +L++A ID
Sbjct: 436 ---------LFSK---------LLETHGIKPRVEHYACVVDLLGRAGRLKEA-KHLID-- 474
Query: 313 NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
I+PN + +L+ C +E G + G+++ ++P + ++YG+ G ++
Sbjct: 475 TMPIKPNVGIWQTLLSLCRVHGDIELGKEV-GKILLRIDAKNPANYVMMSNLYGQAGYWN 533
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 431 bits (1108), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/565 (38%), Positives = 336/565 (59%), Gaps = 2/565 (0%)
Query: 121 SSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPC 180
+++L+ C + G VH +++S F ++ +G+ L +MY+KCG + +A KVFE+MP
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 181 KDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSL 240
+D V WT++I GY ++ AL+ + +M+ ++ L S + A A + G L
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 241 HAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQ 300
H VK GF+ +G+AL DLY++ G M A VF + RN VS+ A++ G+
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES-RNDVSWNALIAGHARRSG 242
Query: 301 LEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSA 360
EKAL F + G P+ F+++SL AC++ LE G +H ++K F +
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 361 LVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPN 420
L+DMY K G + ++FD + + +WN+L+ +AQHG G+ A+ F EM G++PN
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 421 AVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFI 480
++F+++L CSH+G++++G +Y+ M K G++P HY ++DLLGRAG L FI
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 481 NSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWE 540
MP EPTA W + L AC+ H + E AA + +L+P++ G HV+L NIYA +W
Sbjct: 422 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 481
Query: 541 DVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVG 600
D +RK +++ +KK P SWV+I N H+F D HP+++EI K + +L +IK +G
Sbjct: 482 DAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELG 541
Query: 601 YVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFK 660
YVP T V++ +D +E L HSE+IA+A++LL +P G I +KKN+RVC DCH+A K
Sbjct: 542 YVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIK 601
Query: 661 YISKVTERNIIVRDISRFHHFSNGS 685
SKV R IIVRD +RFHHF + S
Sbjct: 602 LASKVVGREIIVRDTNRFHHFKDAS 626
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 218/415 (52%), Gaps = 5/415 (1%)
Query: 14 CDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKL 73
D + L++ C K L +G+ +HA +++ + N LLN+Y+KCG L+ A K+
Sbjct: 58 ADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV 117
Query: 74 FDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSI 133
F++M +R+ V+WT +I+G+ + R +AL F QM G + ++F LSSV++A A+
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
G Q+H VK GF + +GS L D+Y++ G + DA VF+ + +++V W ++I G+
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 237
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
+ EKAL ++ M+ D S AC++ GK +HA ++K G +
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
F GN L D+Y+KSG + A +F + R++VS+ +++ Y + ++A+ F ++R
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAK-RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
GI PNE +F S++ AC++ L+ G + + K + + +VD+ G+ G +
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 374 SIQLFDEIE-NPNDTAWNTLVGVFAQHG---LGRNAIETFNEMVDRGLKPNAVTF 424
+++ +E+ P W L+ H LG A E E+ P+ + +
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILY 471
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 119/268 (44%), Gaps = 34/268 (12%)
Query: 310 DLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCG 369
DL S I + +++L+K C L G ++H +++ F D + + L++MY KCG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 370 LFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLK 429
+ + ++F+++ + W TL+ ++QH +A+ FN+M+ G PN T +++K
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 430 -------GCS----HAGMVEDGLN-------YFYSMDKIYGVMPREE------------H 459
GC H V+ G + + YG+M +
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 460 YNCII-DLLGRAGKLKEVEDFINSMP--FEPTAFGWCSFLGACKTHGDKERAK-LAAYKL 515
+N +I R+G K +E F + F P+ F + S GAC + G E+ K + AY +
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289
Query: 516 MKLEPENSGAHVLLSNIYAKERQWEDVR 543
E + A L ++YAK D R
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/684 (33%), Positives = 376/684 (54%), Gaps = 13/684 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS V+ ++ + +G+ LH ++ G + N L+ +Y K A ++F
Sbjct: 206 DSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVF 265
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQF-----ALSSVLQACAS 129
D M R+ VS+ MI G+ + E++ F E QF +SSVL+AC
Sbjct: 266 DEMDVRDSVSYNTMICGYLKLEMVEESVRMFL------ENLDQFKPDLLTVSSVLRACGH 319
Query: 130 LGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSM 189
L + ++ ++K+GF E + + L D+Y+KCG++ A VF M CKD V W S+
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 190 IDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF 249
I GY+++G+ +A+ +K M+ D +S T L FGK LH+ +K G
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI 439
Query: 250 EYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFI 309
+ + NAL D+Y+K G++ + +F S G + V++ ++ V L
Sbjct: 440 CIDLSVSNALIDMYAKCGEVGDSLKIFSS-MGTGDTVTWNTVISACVRFGDFATGLQVTT 498
Query: 310 DLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCG 369
+R S + P+ TF + CA+ A G +H +++F ++ + + +AL++MY KCG
Sbjct: 499 QMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCG 558
Query: 370 LFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLK 429
++S ++F+ + + W ++ + +G G A+ETF +M G+ P++V F+ ++
Sbjct: 559 CLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIY 618
Query: 430 GCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTA 489
CSH+G+V++GL F M Y + P EHY C++DLL R+ K+ + E+FI +MP +P A
Sbjct: 619 ACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDA 678
Query: 490 FGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMI 549
W S L AC+T GD E A+ + ++++L P++ G +L SN YA R+W+ V +RK +
Sbjct: 679 SIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSL 738
Query: 550 RDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVL 609
+D ++ K PGYSW+++G HVF D S P+ + IY+ L+ L + GY+P V
Sbjct: 739 KDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVS 798
Query: 610 IEM-DDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTER 668
+ ++ K +L+ HSER+A+A+ LL + G P+ V KNLRVC DCH K ISK+ R
Sbjct: 799 QNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGR 858
Query: 669 NIIVRDISRFHHFSNGSCSCGDYW 692
I+VRD +RFH F +G+CSC D W
Sbjct: 859 EILVRDANRFHLFKDGTCSCKDRW 882
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/537 (27%), Positives = 257/537 (47%), Gaps = 8/537 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D +I+ CA + G ++ Q++ G F+ N L+++YS+ G L A ++F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
D M R++VSW ++I+G+ + EAL+ + +++ F +SSVL A +L ++
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G +H +KSG + + + L MY K +DA +VF+EM +D V + +MI GY+
Sbjct: 225 QGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYL 284
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
K E+++ + + + D D + S L AC L+ S K ++ ++K GF E+
Sbjct: 285 KLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+ N L D+Y+K GDM++A +VF S C++ VS+ +I+ GY++ L +A+ F +
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSME-CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIM 402
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
+ + T+ LI A L+ G LH +K D VS+AL+DMY KCG S
Sbjct: 403 EEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDS 462
Query: 375 IQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHA 434
+++F + + WNT++ + G ++ +M + P+ TF+ L C+
Sbjct: 463 LKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASL 522
Query: 435 GMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCS 494
G + + +G + N +I++ + G L+ M W
Sbjct: 523 AAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTG 580
Query: 495 FLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQW---EDVRCLRKM 548
+ A +G+ E+A L + M+ + V ++ IYA E + C KM
Sbjct: 581 MIYAYGMYGEGEKA-LETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM 636
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 244/482 (50%), Gaps = 5/482 (1%)
Query: 24 QTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK-RNM 82
+ + + L++ +++HA +I G F + L++ YS E ++ +F R+S +N+
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 83 VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCL 142
W ++I F ++ F EAL+ + ++R + ++ SV++ACA L + G V+
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 143 VVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKA 202
++ GF +LF+G+ L DMYS+ G ++ A +VF+EMP +D V W S+I GY +G +E+A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 203 LIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDL 262
L Y ++ + D + S L A L G+ LH +K G + N L +
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 263 YSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFT 322
Y K A VF + R+ VS+ ++ GY++++ +E+++ F++ + +P+ T
Sbjct: 252 YLKFRRPTDARRVFD-EMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLT 309
Query: 323 FSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE 382
SS+++AC + L ++ ++K F + V + L+D+Y KCG + +F+ +E
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 383 NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLN 442
+ +WN+++ + Q G A++ F M+ + + +T++ L+ + ++ G
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429
Query: 443 YFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTH 502
+S G+ N +ID+ + G++ + +SM T W + + AC
Sbjct: 430 -LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTV-TWNTVISACVRF 487
Query: 503 GD 504
GD
Sbjct: 488 GD 489
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 200/405 (49%), Gaps = 9/405 (2%)
Query: 120 LSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEM- 178
+S L + ++L ++ ++H LV+ G F L D YS E + + VF +
Sbjct: 10 ISRALSSSSNLNELR---RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 179 PCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGK 238
P K+ LW S+I + KNG F +AL Y K+ V D++ S + AC L G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 239 SLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEM 298
++ I+ GFE + F+GNAL D+YS+ G + A VF + R++VS+ +++ GY
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFD-EMPVRDLVSWNSLISGYSSH 185
Query: 299 DQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS 358
E+AL + +L+NS I P+ FT SS++ A N ++ G LHG +K + V+
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 359 SALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLK 418
+ LV MY K + ++FDE++ + ++NT++ + + + ++ F E +D+ K
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FK 304
Query: 419 PNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVED 478
P+ +T ++L+ C H + Y Y+ G + N +ID+ + G + D
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLA-KYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 479 FINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENS 523
NSM + T W S + GD A + +K+M + E +
Sbjct: 364 VFNSMECKDTV-SWNSIISGYIQSGDLMEA-MKLFKMMMIMEEQA 406
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/642 (36%), Positives = 365/642 (56%), Gaps = 46/642 (7%)
Query: 94 RSLRFREALDTFCQM-----------RAEGETASQFALSSVLQACASLGSIQFGVQVHCL 142
R+ RF EA+D C RA+ AS + +++Q C+ +++ G +VH
Sbjct: 53 RANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYC--NLIQVCSQTRALEEGKKVHEH 110
Query: 143 VVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP----C------------------ 180
+ SGF + + + L MY+KCG + DA KVF+EMP C
Sbjct: 111 IRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEA 170
Query: 181 ---------KDEVLWTSMIDGYVKNGNFEKALIAYKKMV-TDNVFIDQHVLCSTLSACTA 230
KD WT+M+ GYVK E+AL+ Y M N + + ++A A
Sbjct: 171 RKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAA 230
Query: 231 LKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTA 290
+K GK +H IV+ G + + + ++L D+Y K G + A N+F +++VS+T+
Sbjct: 231 VKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVE-KDVVSWTS 289
Query: 291 IVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFN 350
++D Y + + + + F +L S PNE+TF+ ++ ACA+ E G +HG + +
Sbjct: 290 MIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVG 349
Query: 351 FDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFN 410
FD F SS+LVDMY KCG + + + D P+ +W +L+G AQ+G A++ F+
Sbjct: 350 FDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD 409
Query: 411 EMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRA 470
++ G KP+ VTFVN+L C+HAG+VE GL +FYS+ + + + +HY C++DLL R+
Sbjct: 410 LLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARS 469
Query: 471 GKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLS 530
G+ ++++ I+ MP +P+ F W S LG C T+G+ + A+ AA +L K+EPEN +V ++
Sbjct: 470 GRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMA 529
Query: 531 NIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLD 590
NIYA +WE+ +RK +++ + K PG SW +I + HVF D SHP +I E L
Sbjct: 530 NIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLR 589
Query: 591 SLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLR 650
L ++K GYVP T VL +++D KE+ L HSE++AVA+++L + G I V KNLR
Sbjct: 590 ELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLR 649
Query: 651 VCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
C DCH A K+IS +T+R I VRD +RFH F NG CSCGDYW
Sbjct: 650 SCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 235/484 (48%), Gaps = 43/484 (8%)
Query: 10 RHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGEL-- 67
R K + LIQ C+Q + L +GK++H + G +P + N LL +Y+KCG L
Sbjct: 79 RAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVD 138
Query: 68 -----------------------------DYAIKLFDRMSKRNMVSWTAMITGFFRSLRF 98
+ A KLFD M++++ SWTAM+TG+ + +
Sbjct: 139 ARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQP 198
Query: 99 REALDTFCQM-RAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSN 157
EAL + M R + F +S + A A++ I+ G ++H +V++G + L S+
Sbjct: 199 EEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSS 258
Query: 158 LTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFID 217
L DMY KCG + +A +F+++ KD V WTSMID Y K+ + + + ++V +
Sbjct: 259 LMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPN 318
Query: 218 QHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQ 277
++ L+AC L GK +H + + GF+ +F ++L D+Y+K G++ SA +V
Sbjct: 319 EYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVD 378
Query: 278 SDSGC--RNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAK 335
GC ++VS+T+++ G + Q ++AL F L SG +P+ TF +++ AC +
Sbjct: 379 ---GCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGL 435
Query: 336 LEHG-SLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLV 393
+E G + K + LVD+ + G F+ + E+ P+ W +++
Sbjct: 436 VEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVL 495
Query: 394 GVFAQHGLGRNAIETFNEMVDRGLKP-NAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYG 452
G + +G A E E+ ++P N VT+V + + AG E+ M +I G
Sbjct: 496 GGCSTYGNIDLAEEAAQELFK--IEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEI-G 552
Query: 453 VMPR 456
V R
Sbjct: 553 VTKR 556
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 173/358 (48%), Gaps = 15/358 (4%)
Query: 32 LSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITG 91
+ +GK++H ++R G L + L+++Y KCG +D A +FD++ ++++VSWT+MI
Sbjct: 234 IRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDR 293
Query: 92 FFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCE 151
+F+S R+RE F ++ E +++ + VL ACA L + + G QVH + + GF
Sbjct: 294 YFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY 353
Query: 152 LFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVT 211
F S+L DMY+KCG + A V + P D V WTS+I G +NG ++AL + ++
Sbjct: 354 SFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK 413
Query: 212 DNVFIDQHVLCSTLSACTALKAFSFG-KSLHAIIVKFGFEYETFIGNALTDLYSKSGDMV 270
D + LSACT G + ++I K + + L DL ++SG
Sbjct: 414 SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFE 473
Query: 271 SASNVFQSDSGCRNIVSFTAIVDG---YVEMDQLEKALNAFIDLRNSGIEP-NEFTFSSL 326
+V + + +++ G Y +D E+A IEP N T+ ++
Sbjct: 474 QLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK-----IEPENPVTYVTM 528
Query: 327 IKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLF---DHSIQLFDEI 381
A K E + ++ + + P S+ ++ K +F D S ++++I
Sbjct: 529 ANIYAAAGKWEEEGKMRKRMQEIGVTKRP--GSSWTEIKRKRHVFIAADTSHPMYNQI 584
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/669 (34%), Positives = 378/669 (56%), Gaps = 4/669 (0%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
+++TC +L++GK++H ++R G + N L+ +Y KCG++ A LFDRM +R+
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
++SW AMI+G+F + E L+ F MR L+SV+ AC LG + G +H
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
V+ +GF ++ + ++LT MY G +A K+F M KD V WT+MI GY N +K
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
A+ Y+ M D+V D+ + + LSAC L G LH + +K + N L +
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441
Query: 262 LYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEF 321
+YSK + A ++F + +N++S+T+I+ G ++ +AL F+ ++PN
Sbjct: 442 MYSKCKCIDKALDIFHNIPR-KNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAI 499
Query: 322 TFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEI 381
T ++ + ACA L G +H V++ D F+ +AL+DMY +CG + + F+
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS- 558
Query: 382 ENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGL 441
+ + T+WN L+ +++ G G +E F+ MV ++P+ +TF++LL GCS + MV GL
Sbjct: 559 QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL 618
Query: 442 NYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKT 501
YF M+ YGV P +HY C++DLLGRAG+L+E FI MP P W + L AC+
Sbjct: 619 MYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677
Query: 502 HGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYS 561
H + +L+A + +L+ ++ G ++LL N+YA +W +V +R+M+++ + G S
Sbjct: 678 HHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737
Query: 562 WVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLL 621
WV++ + H F +D HP+ KEI L+ +++ VG +ES ++ + ++++
Sbjct: 738 WVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIF 797
Query: 622 HNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHF 681
HSER A+A+ L+ + G PI V KNL +C +CH K+ISK R I VRD FHHF
Sbjct: 798 CGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHF 857
Query: 682 SNGSCSCGD 690
+G CSCGD
Sbjct: 858 KDGECSCGD 866
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 189/381 (49%), Gaps = 2/381 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D L++ C + +G ++++ + L N L ++ + G L A +F
Sbjct: 93 DEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVF 152
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQ-FALSSVLQACASLGSI 133
+MS+RN+ SW ++ G+ + F EA+ + +M G + VL+ C + +
Sbjct: 153 GKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDL 212
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
G +VH VV+ G+ ++ + + L MY KCG+V A +F+ MP +D + W +MI GY
Sbjct: 213 ARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGY 272
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
+NG + L + M +V D L S +SAC L G+ +HA ++ GF +
Sbjct: 273 FENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDI 332
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
+ N+LT +Y +G A +F S ++IVS+T ++ GY +KA++ + +
Sbjct: 333 SVCNSLTQMYLNAGSWREAEKLF-SRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQ 391
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
++P+E T ++++ ACA L+ G LH +K V++ L++MY KC D
Sbjct: 392 DSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDK 451
Query: 374 SIQLFDEIENPNDTAWNTLVG 394
++ +F I N +W +++
Sbjct: 452 ALDIFHNIPRKNVISWTSIIA 472
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 191/386 (49%), Gaps = 4/386 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + +I C + G+ +HA +I G + N L +Y G A KLF
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
RM ++++VSWT MI+G+ + +A+DT+ M + + +++VL ACA+LG +
Sbjct: 356 SRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLD 415
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
GV++H L +K+ + + +NL +MYSKC + A +F +P K+ + WTS+I G
Sbjct: 416 TGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLR 475
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
N +ALI ++M + + L + L+AC + A GK +HA +++ G + F
Sbjct: 476 LNNRCFEALIFLRQMKM-TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDF 534
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+ NAL D+Y + G M +A + F S +++ S+ ++ GY E Q + F + S
Sbjct: 535 LPNALLDMYVRCGRMNTAWSQFNSQK--KDVTSWNILLTGYSERGQGSMVVELFDRMVKS 592
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
+ P+E TF SL+ C+ + G + ++ + + + +VD+ G+ G +
Sbjct: 593 RVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEA 652
Query: 375 IQLFDEIE-NPNDTAWNTLVGVFAQH 399
+ ++ P+ W L+ H
Sbjct: 653 HKFIQKMPVTPDPAVWGALLNACRIH 678
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 166/346 (47%), Gaps = 2/346 (0%)
Query: 97 RFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGS 156
+ EA+ M+ + ++++ C + + G +V+ + + S + LG+
Sbjct: 74 KLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGN 133
Query: 157 NLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMV-TDNVF 215
M+ + G + DA VF +M ++ W ++ GY K G F++A+ Y +M+ V
Sbjct: 134 AFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVK 193
Query: 216 IDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNV 275
D + L C + + GK +H +V++G+E + + NAL +Y K GD+ SA +
Sbjct: 194 PDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 253
Query: 276 FQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAK 335
F R+I+S+ A++ GY E + L F +R ++P+ T +S+I AC
Sbjct: 254 FDRMPR-RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 336 LEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGV 395
G +H V+ F D V ++L MY G + + +LF +E + +W T++
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 396 FAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGL 441
+ + L AI+T+ M +KP+ +T +L C+ G ++ G+
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGV 418
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/670 (35%), Positives = 371/670 (55%), Gaps = 74/670 (11%)
Query: 1 MASRNLFRFRHKL---CDSKAVAQLIQTCAQAKELSK--GKQLHAQLIRGGCLPCTFLTN 55
MA+++ + L DS A+L+ +C ++K LS + +HA +I+ G F+ N
Sbjct: 1 MATKSFLKLAADLSSFTDSSPFAKLLDSCIKSK-LSAIYVRYVHASVIKSGFSNEIFIQN 59
Query: 56 HLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGF------------FRSL------- 96
L++ YSKCG L+ ++FD+M +RN+ +W +++TG FRS+
Sbjct: 60 RLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCT 119
Query: 97 ------------RFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVV 144
R EAL F M EG ++++ +SVL AC+ L + GVQVH L+
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 145 KSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALI 204
KS F ++++GS L DMYSKCG V+DA +VF+EM ++ V W S+I + +NG +AL
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 205 AYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFG-FEYETFIGNALTDLY 263
++ M+ V D+ L S +SAC +L A G+ +H +VK + + NA D+Y
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 264 SKSGDMVSASNVFQS------------------------------DSGCRNIVSFTAIVD 293
+K + A +F S RN+VS+ A++
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 294 GYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNF-- 351
GY + + E+AL+ F L+ + P ++F++++KACA+ A+L G H V+K F
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 352 ----DRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIE 407
+ D FV ++L+DMY KCG + +F ++ + +WN ++ FAQ+G G A+E
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 408 TFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLL 467
F EM++ G KP+ +T + +L C HAG VE+G +YF SM + +GV P +HY C++DLL
Sbjct: 480 LFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLL 539
Query: 468 GRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHV 527
GRAG L+E + I MP +P + W S L ACK H + K A KL+++EP NSG +V
Sbjct: 540 GRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYV 599
Query: 528 LLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYE 587
LLSN+YA+ +WEDV +RK +R + K PG SW+ I HVF V+D SHPRKK+I+
Sbjct: 600 LLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHS 659
Query: 588 KLDSLLDQIK 597
LD L+ +++
Sbjct: 660 LLDILIAEMR 669
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/721 (32%), Positives = 397/721 (55%), Gaps = 51/721 (7%)
Query: 16 SKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLY-------SKCGELD 68
S A +++ + K L+ KQLHA ++R + NH LN + S L
Sbjct: 9 STAANTILEKLSFCKSLNHIKQLHAHILRT-------VINHKLNSFLFNLSVSSSSINLS 61
Query: 69 YAIKLFDRM-SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQAC 127
YA+ +F + S + + + RS R + + ++R G QF+ +L+A
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 128 ASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWT 187
+ + ++ G+++H + K C+ F+ + DMY+ CG ++ A VF+EM +D V W
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 188 SMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKF 247
+MI+ Y + G ++A +++M NV D+ +LC+ +SAC + ++++ +++
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 248 GFEYETFIGNALTDLYSKSGDM---------VSASNVFQSD------SGC---------- 282
+T + AL +Y+ +G M +S N+F S S C
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 283 -----RNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLE 337
+++V +T ++ YVE D ++AL F ++ SGI+P+ + S+I ACAN L+
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 338 HGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFA 397
+H + + + +++AL++MY KCG D + +F+++ N +W++++ +
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421
Query: 398 QHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPRE 457
HG +A+ F M ++PN VTFV +L GCSH+G+VE+G F SM Y + P+
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481
Query: 458 EHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMK 517
EHY C++DL GRA L+E + I SMP W S + AC+ HG+ E K AA ++++
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541
Query: 518 LEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDW 577
LEP++ GA VL+SNIYA+E++WEDVR +R+++ + N+ K G S +D ++H F + D
Sbjct: 542 LEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDK 601
Query: 578 SHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVS 637
H + EIY KLD ++ ++K+ GYVP SVL+++++ K+ L+ HSE++A+ + L+
Sbjct: 602 RHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNE 661
Query: 638 PIGKP------IIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDY 691
+ I + KNLRVC DCH FK +SKV ER IIVRD +RFH + NG CSC DY
Sbjct: 662 EKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDY 721
Query: 692 W 692
W
Sbjct: 722 W 722
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 209/443 (47%), Gaps = 39/443 (8%)
Query: 8 RFRH--KLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCG 65
R RH D + +++ ++ L +G +LH + L F+ +++Y+ CG
Sbjct: 101 RIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCG 160
Query: 66 ELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQ 125
++YA +FD MS R++V+W MI + R EA F +M+ + L +++
Sbjct: 161 RINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVS 220
Query: 126 ACASLGSIQFGVQVHCLVVK-----------------SGFGC--------------ELFL 154
AC G++++ ++ +++ +G GC LF+
Sbjct: 221 ACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFV 280
Query: 155 GSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNV 214
+ + YSKCG + DA +F++ KD V WT+MI YV++ ++AL +++M +
Sbjct: 281 STAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGI 340
Query: 215 FIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASN 274
D + S +SAC L K +H+ I G E E I NAL ++Y+K G + + +
Sbjct: 341 KPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRD 400
Query: 275 VFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQA 334
VF+ RN+VS++++++ + AL+ F ++ +EPNE TF ++ C++
Sbjct: 401 VFEKMPR-RNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSG 459
Query: 335 KLEHGSLLHGQVV-KFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTL 392
+E G + + ++N +VD++G+ L ++++ + + N W +L
Sbjct: 460 LVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSL 519
Query: 393 VGVFAQHG---LGRNAIETFNEM 412
+ HG LG+ A + E+
Sbjct: 520 MSACRIHGELELGKFAAKRILEL 542
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/728 (30%), Positives = 380/728 (52%), Gaps = 69/728 (9%)
Query: 34 KGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFF 93
K Q HA++++ G +++ L+ YS + A + + + S++++I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 94 RSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELF 153
++ F +++ F +M + G L ++ + CA L + + G Q+HC+ SG + F
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 154 LGSNLTDMYSKCGEVSDACKVFEEMPCKDEVL---------------------------- 185
+ ++ MY +CG + DA KVF+ M KD V
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 186 -------WTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGK 238
W ++ G+ ++G ++A++ ++K+ DQ + S L + + + G+
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 239 SLHAIIVKFGFEYETFIGNALTDLYSKSG------------DMVSAS------------- 273
+H ++K G + + +A+ D+Y KSG +M+ A
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 274 ---------NVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFS 324
+F+ + N+VS+T+I+ G + + +AL F +++ +G++PN T
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 325 SLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENP 384
S++ AC N A L HG HG V+ + + V SAL+DMY KCG + S +F+ +
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 385 NDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYF 444
N WN+L+ F+ HG + + F ++ LKP+ ++F +LL C G+ ++G YF
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 445 YSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGD 504
M + YG+ PR EHY+C+++LLGRAGKL+E D I MPFEP + W + L +C+ +
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNN 572
Query: 505 KERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVD 564
+ A++AA KL LEPEN G +VLLSNIYA + W +V +R + +KK PG SW+
Sbjct: 573 VDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQ 632
Query: 565 IGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNH 624
+ N + D SHP+ +I EK+D + +++ G+ P + L ++++ +E++L H
Sbjct: 633 VKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGH 692
Query: 625 SERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNG 684
SE++AV + LL +P G P+ V KNLR+C DCH+ K+IS R I +RD +RFHHF +G
Sbjct: 693 SEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDG 752
Query: 685 SCSCGDYW 692
CSCGD+W
Sbjct: 753 ICSCGDFW 760
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 190/459 (41%), Gaps = 76/459 (16%)
Query: 9 FRHKLC-DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGEL 67
F H L DS + L + CA+ GKQ+H G F+ + ++Y +CG +
Sbjct: 108 FSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRM 167
Query: 68 DYAIKLFDRMSKR-----------------------------------NMVSWTAMITGF 92
A K+FDRMS + N+VSW +++GF
Sbjct: 168 GDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGF 227
Query: 93 FRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCEL 152
RS +EA+ F ++ G Q +SSVL + + G +H V+K G +
Sbjct: 228 NRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDK 287
Query: 153 FLGSNLTDMYSKCGEVSDACKVFEEMPCKDE----------------------------- 183
+ S + DMY K G V +F + +
Sbjct: 288 CVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQ 347
Query: 184 ------VLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFG 237
V WTS+I G +NG +AL +++M V + + S L AC + A G
Sbjct: 348 TMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG 407
Query: 238 KSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVE 297
+S H V+ +G+AL D+Y+K G ++ S + + +N+V + ++++G+
Sbjct: 408 RSTHGFAVRVHLLDNVHVGSALIDMYAKCGR-INLSQIVFNMMPTKNLVCWNSLMNGFSM 466
Query: 298 MDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFV 357
+ ++ ++ F L + ++P+ +F+SL+ AC Q L + +++ + P +
Sbjct: 467 HGKAKEVMSIFESLMRTRLKPDFISFTSLLSACG-QVGLTDEGWKYFKMMSEEYGIKPRL 525
Query: 358 S--SALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLV 393
S +V++ G+ G + L E+ P+ W L+
Sbjct: 526 EHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Query: 18 AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM 77
+ ++ C L G+ H +R L + + L+++Y+KCG ++ + +F+ M
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 78 SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
+N+V W +++ GF + +E + F + + +S+L AC +G G
Sbjct: 450 PTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGW 509
Query: 138 QVHCLVVKS-GFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMIDGYVK 195
+ ++ + G L S + ++ + G++ +A + +EMP + D +W ++++
Sbjct: 510 KYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRL 569
Query: 196 NGNFEKALIAYKKM 209
N + A IA +K+
Sbjct: 570 QNNVDLAEIAAEKL 583
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 254/666 (38%), Positives = 359/666 (53%), Gaps = 71/666 (10%)
Query: 55 NHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET 114
N L++ Y K GE+D A K+FD M +RN+VSWTA++ G+ + + A F +M + +
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV 142
Query: 115 ASQFALSSVLQ------AC------ASLGSIQFGVQVH--CLVVKSGFGCELF------- 153
+ L LQ AC +I +H C + E+F
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERS 202
Query: 154 --LGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVT 211
+ + Y + V DA K+F+ MP K EV WTSM+ GYV+NG E A ++ M
Sbjct: 203 VITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPV 262
Query: 212 DNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVS 271
V AC NA+ + G++
Sbjct: 263 KPVI-----------AC----------------------------NAMISGLGQKGEIAK 283
Query: 272 ASNVFQSDSGCRNIVSFTAIVDGYVEMDQLE-KALNAFIDLRNSGIEPNEFTFSSLIKAC 330
A VF S RN S+ ++ + E + E +AL+ FI ++ G+ P T S++ C
Sbjct: 284 ARRVFDSMKE-RNDASWQTVIKIH-ERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341
Query: 331 ANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWN 390
A+ A L HG +H Q+V+ FD D +V+S L+ MY KCG S +FD + + WN
Sbjct: 342 ASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWN 401
Query: 391 TLVGVFAQHGLGRNAIETFNEMVDRG-LKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDK 449
+++ +A HGLG A++ F EM G KPN VTFV L CS+AGMVE+GL + SM+
Sbjct: 402 SIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMES 461
Query: 450 IYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAK 509
++GV P HY C++D+LGRAG+ E + I+SM EP A W S LGAC+TH + A+
Sbjct: 462 VFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAE 521
Query: 510 LAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNET 569
A KL+++EPENSG ++LLSN+YA + +W DV LRK+++ ++K PG SW ++ N+
Sbjct: 522 FCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKV 581
Query: 570 HVF---GVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSE 626
H F G+ SHP ++ I + LD L ++ GY P L ++D+ K L HSE
Sbjct: 582 HAFTRGGIN--SHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSE 639
Query: 627 RIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSC 686
R+AVAY+LL G PI V KNLRVCSDCH+A K ISKV ER II+RD +RFHHF NG C
Sbjct: 640 RLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGEC 699
Query: 687 SCGDYW 692
SC DYW
Sbjct: 700 SCKDYW 705
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 100/193 (51%), Gaps = 5/193 (2%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
++ CA L GKQ+HAQL+R ++ + L+ +Y KCGEL + +FDR ++
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKD 396
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGET-ASQFALSSVLQACASLGSIQFGVQVH 140
++ W ++I+G+ EAL FC+M G T ++ + L AC+ G ++ G++++
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
Query: 141 CLVVKSGFGCELFLG--SNLTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMIDGYVKNG 197
++S FG + + + DM + G ++A ++ + M + D +W S++ +
Sbjct: 457 -ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHS 515
Query: 198 NFEKALIAYKKMV 210
+ A KK++
Sbjct: 516 QLDVAEFCAKKLI 528
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/610 (36%), Positives = 363/610 (59%), Gaps = 9/610 (1%)
Query: 86 TAMITGFFRSLRFRE---ALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCL 142
T +++ F R R+ A+ +++ G A S +++ C S ++ G +
Sbjct: 27 TLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRH 86
Query: 143 VVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKA 202
+ +G +FL + L +MY K ++DA ++F++MP ++ + WT+MI Y K +KA
Sbjct: 87 LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146
Query: 203 LIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDL 262
L M+ DNV + + S L +C + S + LH I+K G E + F+ +AL D+
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCNGM---SDVRMLHCGIIKEGLESDVFVRSALIDV 203
Query: 263 YSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFT 322
++K G+ A +VF IV + +I+ G+ + + + AL F ++ +G + T
Sbjct: 204 FAKLGEPEDALSVFDEMVTGDAIV-WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQAT 262
Query: 323 FSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE 382
+S+++AC A LE G H +VK+ D+D +++ALVDMY KCG + ++++F++++
Sbjct: 263 LTSVLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMK 320
Query: 383 NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLN 442
+ W+T++ AQ+G + A++ F M G KPN +T V +L CSHAG++EDG
Sbjct: 321 ERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWY 380
Query: 443 YFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTH 502
YF SM K+YG+ P EHY C+IDLLG+AGKL + +N M EP A W + LGAC+
Sbjct: 381 YFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQ 440
Query: 503 GDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSW 562
+ A+ AA K++ L+PE++G + LLSNIYA ++W+ V +R +RD +KK PG SW
Sbjct: 441 RNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSW 500
Query: 563 VDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLH 622
+++ + H F + D SHP+ E+ +KL+ L+ ++ +GYVP+T VL +++ E L
Sbjct: 501 IEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLR 560
Query: 623 NHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFS 682
+HSE++A+A+ L+ PI K I ++KNLR+C DCH K SK+ R+I++RD R+HHF
Sbjct: 561 HHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQ 620
Query: 683 NGSCSCGDYW 692
+G CSCGDYW
Sbjct: 621 DGKCSCGDYW 630
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 203/383 (53%), Gaps = 10/383 (2%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS ++LI+ C + + +G + L G P FL N L+N+Y K L+ A +LF
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
D+M +RN++SWT MI+ + + ++AL+ M + + + SSVL++C + ++
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
+HC ++K G ++F+ S L D+++K GE DA VF+EM D ++W S+I G+
Sbjct: 180 M---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+N + AL +K+M +Q L S L ACT L G H IVK ++ +
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLI 294
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+ NAL D+Y K G + A VF R++++++ ++ G + ++AL F +++S
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKE-RDVITWSTMISGLAQNGYSQEALKLFERMKSS 353
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFD 372
G +PN T ++ AC++ LE G + K + DP ++D+ GK G D
Sbjct: 354 GTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKL-YGIDPVREHYGCMIDLLGKAGKLD 412
Query: 373 HSIQLFDEIE-NPNDTAWNTLVG 394
+++L +E+E P+ W TL+G
Sbjct: 413 DAVKLLNEMECEPDAVTWRTLLG 435
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/576 (37%), Positives = 345/576 (59%), Gaps = 4/576 (0%)
Query: 120 LSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP 179
+SS++ A S SI+ +HC VVKS F+G L Y + G A K+F+EMP
Sbjct: 34 VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 180 CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFI--DQHVLCSTLSACTALKAFSFG 237
+D V W S+I GY G K +M+ V ++ S +SAC + G
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 238 KSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVE 297
+ +H +++KFG E + NA + Y K+GD+ S+ +F+ D +N+VS+ ++ +++
Sbjct: 154 RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFE-DLSIKNLVSWNTMIVIHLQ 212
Query: 298 MDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFV 357
EK L F R G EP++ TF +++++C + + +HG ++ F + +
Sbjct: 213 NGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCI 272
Query: 358 SSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGL 417
++AL+D+Y K G + S +F EI +P+ AW ++ +A HG GR+AI+ F MV G+
Sbjct: 273 TTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGI 332
Query: 418 KPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVE 477
P+ VTF +LL CSH+G+VE+G +YF +M K Y + PR +HY+C++DLLGR+G L++
Sbjct: 333 SPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAY 392
Query: 478 DFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKER 537
I MP EP++ W + LGAC+ + D + AA +L +LEP + +V+LSNIY+
Sbjct: 393 GLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASG 452
Query: 538 QWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIK 597
W+D +R +++ + + G S+++ GN+ H F V DWSHP ++I +KL + ++K
Sbjct: 453 LWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMK 512
Query: 598 I-VGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCH 656
+GY +TE VL ++ + +KE++++ HSE+IA+A+ LLV +PII++KNLR+C DCH
Sbjct: 513 SEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCH 572
Query: 657 SAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
K IS + +R II+RD RFHHF +GSCSC DYW
Sbjct: 573 ETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 209/457 (45%), Gaps = 29/457 (6%)
Query: 19 VAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS 78
V+ LI + + LH ++++ F+ + L+ Y + G A KLFD M
Sbjct: 34 VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 79 KRNMVSWTAMITGFFRSLRFREALDTFCQMRAE--GETASQFALSSVLQACASLGSIQFG 136
+R++VSW ++I+G+ + + +M G ++ S++ AC GS + G
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 137 VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKN 196
+H LV+K G E+ + + + Y K G+++ +CK+FE++ K+ V W +MI +++N
Sbjct: 154 RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQN 213
Query: 197 GNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIG 256
G EK L + DQ + L +C + + +H +I+ GF I
Sbjct: 214 GLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT 273
Query: 257 NALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI 316
AL DLYSK G + +S VF + + +++TA++ Y A+ F + + GI
Sbjct: 274 TALLDLYSKLGRLEDSSTVFHEITS-PDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGI 332
Query: 317 EPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFDHS 374
P+ TF+ L+ AC++ +E G + K + DP + S +VD+ G+ GL +
Sbjct: 333 SPDHVTFTHLLNACSHSGLVEEGKHYFETMSK-RYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Query: 375 IQLFDEIE-NPNDTAWNTLVG---VFAQHGLGRNAIETFNEMVDR--------------- 415
L E+ P+ W L+G V+ LG A E E+ R
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSAS 451
Query: 416 GLKPNAVTFVNLLKGCSHAGMVE-DGLNYFYSMDKIY 451
GL +A NL+K G+V G +Y +KI+
Sbjct: 452 GLWKDASRIRNLMK---QKGLVRASGCSYIEHGNKIH 485
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D ++++C + + +H ++ GG +T LL+LYSK G L+ + +F
Sbjct: 234 DQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVF 293
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
++ + ++WTAM+ + R+A+ F M G + + +L AC+ G ++
Sbjct: 294 HEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVE 353
Query: 135 FGVQ-VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP 179
G + + L S + D+ + G + DA + +EMP
Sbjct: 354 EGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMP 399
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 246/701 (35%), Positives = 391/701 (55%), Gaps = 30/701 (4%)
Query: 12 KLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGG-CLP-CTFLTNHLLNLYSKCGELDY 69
+L +A A L Q CA+ + L G LH ++ C L N L+N+Y+KCG + Y
Sbjct: 55 ELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILY 114
Query: 70 AIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACAS 129
A ++FD M +RN+VSWTA+ITG+ ++ +E F M + ++F LSSVL +C
Sbjct: 115 ARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHC-FPNEFTLSSVLTSC-- 171
Query: 130 LGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKC---GEVSDACKVFEEMPCKDEVLW 186
+ G QVH L +K G C +++ + + MY +C +A VFE + K+ V W
Sbjct: 172 --RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTW 229
Query: 187 TSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVL---CSTLSACTALKAFSFGK---SL 240
SMI + +KA+ + +M +D V D+ L CS+L + L K L
Sbjct: 230 NSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQL 289
Query: 241 HAIIVKFGFEYETFIGNALTDLYSKS-GDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMD 299
H++ VK G +T + AL +YS+ D +F S CR+IV++ I+ + D
Sbjct: 290 HSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD 349
Query: 300 QLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS 359
E+A++ F LR + P+ +TFSS++KACA H +H QV+K F D +++
Sbjct: 350 P-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNN 408
Query: 360 ALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKP 419
+L+ Y KCG D +++FD++++ + +WN+++ ++ HG + + F +M + P
Sbjct: 409 SLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINP 465
Query: 420 NAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDF 479
++ TF+ LL CSHAG VE+GL F SM + +P+ HY C+ID+L RA + E E+
Sbjct: 466 DSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEV 525
Query: 480 INSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKL-EPENSGAHVLLSNIYAKERQ 538
I MP +P A W + LG+C+ HG+ KLAA KL +L EP NS +++ +SNIY E
Sbjct: 526 IKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGS 585
Query: 539 WEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKI 598
+ + K + ++K P SW +IGN+ H F P K+ +Y +L L+ +K
Sbjct: 586 FNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKE 645
Query: 599 VGYVPQ--TESVLIEMDDTLKEKLLHNHSERIAVAYSLL----VSPIGKPII-VKKNLRV 651
+GYVP+ + S IE ++ ++ LLH HSE++A+A++++ S G +I + KN R+
Sbjct: 646 MGYVPEMRSASQDIEDEEQEEDNLLH-HSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRI 704
Query: 652 CSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
C DCH+ K SK+ + I++RD +RFHHF + SCSC DYW
Sbjct: 705 CIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/585 (36%), Positives = 336/585 (57%), Gaps = 3/585 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D L+ TCA + +L G Q H+ +I+ F+ N L+++Y+KCG L+ A ++F
Sbjct: 427 DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIF 486
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+RM R+ V+W +I + + EA D F +M G + L+S L+AC + +
Sbjct: 487 ERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLY 546
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G QVHCL VK G +L GS+L DMYSKCG + DA KVF +P V ++I GY
Sbjct: 547 QGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS 606
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYE-T 253
+N N E+A++ +++M+T V + + + AC ++ + G H I K GF E
Sbjct: 607 QN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGE 665
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
++G +L +Y S M A +F S ++IV +T ++ G+ + E+AL + ++R+
Sbjct: 666 YLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH 725
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
G+ P++ TF ++++ C+ + L G +H + D D S+ L+DMY KCG
Sbjct: 726 DGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKG 785
Query: 374 SIQLFDEIEN-PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
S Q+FDE+ N +WN+L+ +A++G +A++ F+ M + P+ +TF+ +L CS
Sbjct: 786 SSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACS 845
Query: 433 HAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGW 492
HAG V DG F M YG+ R +H C++DLLGR G L+E +DFI + +P A W
Sbjct: 846 HAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLW 905
Query: 493 CSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDG 552
S LGAC+ HGD R +++A KL++LEP+NS A+VLLSNIYA + WE LRK++RD
Sbjct: 906 SSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDR 965
Query: 553 NMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIK 597
+KK+PGYSW+D+ TH+F D SH +I L+ L D +K
Sbjct: 966 GVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 246/479 (51%), Gaps = 5/479 (1%)
Query: 32 LSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITG 91
L G +HA+ I+ G ++ + L+++YSKC +++ A K+F+ + ++N V W AMI G
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402
Query: 92 FFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCE 151
+ + + ++ F M++ G F +S+L CA+ ++ G Q H +++K
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462
Query: 152 LFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVT 211
LF+G+ L DMY+KCG + DA ++FE M +D V W ++I YV++ N +A +K+M
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL 522
Query: 212 DNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVS 271
+ D L STL ACT + GK +H + VK G + + G++L D+YSK G +
Sbjct: 523 CGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKD 582
Query: 272 ASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACA 331
A VF S ++VS A++ GY + + LE+A+ F ++ G+ P+E TF+++++AC
Sbjct: 583 ARKVFSSLPEW-SVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACH 640
Query: 332 NQAKLEHGSLLHGQVVKFNFDRD-PFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTA-W 389
L G+ HGQ+ K F + ++ +L+ MY + LF E+ +P W
Sbjct: 641 KPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLW 700
Query: 390 NTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDK 449
++ +Q+G A++ + EM G+ P+ TFV +L+ CS + +G +S+
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG-RAIHSLIF 759
Query: 450 IYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERA 508
E N +ID+ + G +K + M W S + +G E A
Sbjct: 760 HLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDA 818
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 194/375 (51%), Gaps = 2/375 (0%)
Query: 57 LLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETAS 116
++N Y + G+L A LF MS ++V+W MI+G + A++ F MR ++
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 117 QFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFE 176
+ L SVL A + ++ G+ VH +K G +++GS+L MYSKC ++ A KVFE
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 177 EMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSF 236
+ K++V W +MI GY NG K + + M + ID S LS C A
Sbjct: 387 ALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEM 446
Query: 237 GKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYV 296
G H+II+K F+GNAL D+Y+K G + A +F+ R+ V++ I+ YV
Sbjct: 447 GSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD-RDNVTWNTIIGSYV 505
Query: 297 EMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPF 356
+ + +A + F + GI + +S +KAC + L G +H VK DRD
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLH 565
Query: 357 VSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRG 416
S+L+DMY KCG+ + ++F + + + N L+ ++Q+ L A+ F EM+ RG
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRG 624
Query: 417 LKPNAVTFVNLLKGC 431
+ P+ +TF +++ C
Sbjct: 625 VNPSEITFATIVEAC 639
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 222/464 (47%), Gaps = 39/464 (8%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
++ TCA+ + G+Q+H +I+ G ++ L+++Y+KC + A ++F+ + N
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPN 225
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
V WT + +G+ ++ EA+ F +MR EG A +V+
Sbjct: 226 TVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVI----------------- 268
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
+ Y + G++ DA +F EM D V W MI G+ K G
Sbjct: 269 ------------------NTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETV 310
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
A+ + M +V + L S LSA + G +HA +K G ++G++L
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 262 LYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEF 321
+YSK M +A+ VF++ +N V + A++ GY + K + F+D+++SG ++F
Sbjct: 371 MYSKCEKMEAAAKVFEALEE-KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDF 429
Query: 322 TFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEI 381
TF+SL+ CA LE GS H ++K ++ FV +ALVDMY KCG + + Q+F+ +
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 382 ENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGL 441
+ ++ WNT++G + Q A + F M G+ + + LK C+H + G
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG- 548
Query: 442 NYFYSMDKIYGVMPREEHY-NCIIDLLGRAGKLKEVEDFINSMP 484
+ + G + R+ H + +ID+ + G +K+ +S+P
Sbjct: 549 KQVHCLSVKCG-LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 216/455 (47%), Gaps = 38/455 (8%)
Query: 29 AKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAM 88
A L GK +H++ + G L N +++LY+KC ++ YA K FD + K ++ +W +M
Sbjct: 73 ALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSM 131
Query: 89 ITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGF 148
++ + + + L +F + ++F S VL CA +++FG Q+HC ++K G
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 149 GCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKK 208
+ G L DMY+KC +SDA +VFE + + V WT + GYVK G E+A++ +++
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 209 MVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGD 268
M + D L+ T + + ++ G L D G+
Sbjct: 252 MRDEGHRPDH------LAFVTVINTY----------IRLG---------KLKDARLLFGE 286
Query: 269 MVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIK 328
M S ++V++ ++ G+ + A+ F ++R S ++ T S++
Sbjct: 287 MSSP-----------DVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 329 ACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTA 388
A A L+ G ++H + +K + +V S+LV MY KC + + ++F+ +E ND
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF 395
Query: 389 WNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMD 448
WN ++ +A +G +E F +M G + TF +LL C+ + +E G + F+S+
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQFHSII 454
Query: 449 KIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
+ N ++D+ + G L++ M
Sbjct: 455 IKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 193/455 (42%), Gaps = 29/455 (6%)
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMID 191
+++ G VH + G E LG+ + D+Y+KC +VS A K F+ + KD W SM+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 192 GYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEY 251
Y G K L ++ + + +F ++ LS C FG+ +H ++K G E
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 252 ETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL 311
++ G AL D+Y+K + A VF+ N V +T + GYV+ E+A+ F +
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVD-PNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 312 RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLF 371
R+ G P+ F ++I KL+ LL G++ D + ++ +GK G
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----PDVVAWNVMISGHGKRGCE 308
Query: 372 DHSIQLF-----DEIENPNDTAWNTL--VGVFAQHGLGRNAIETFNEMVDRGLKPNAVTF 424
+I+ F +++ T + L +G+ A LG + E + GL N
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG---LVVHAEAIKLGLASNIYVG 365
Query: 425 VNLLKGCSHAGMVEDGLNYFYSM----DKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFI 480
+L+ S +E F ++ D + M R +N G + K+ E+ +
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN------GESHKVMELFMDM 419
Query: 481 NSMPFEPTAFGWCSFLGACKTHGDKER-AKLAAYKLMKLEPENSGAHVLLSNIYAKERQW 539
S + F + S L C D E ++ + + K +N L ++YAK
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479
Query: 540 EDVRCL--RKMIRDGNMKKLPGYSWVDIGNETHVF 572
ED R + R RD S+V NE+ F
Sbjct: 480 EDARQIFERMCDRDNVTWNTIIGSYVQDENESEAF 514
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/570 (39%), Positives = 343/570 (60%), Gaps = 2/570 (0%)
Query: 123 VLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKD 182
+L + A S G+Q+H VVKSG + +NL + YSK D+ + FE+ P K
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 183 EVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHA 242
W+S+I + +N +L KKM+ N+ D HVL S +C L G+S+H
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHC 140
Query: 243 IIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLE 302
+ +K G++ + F+G++L D+Y+K G++V A +F + RN+V+++ ++ GY +M + E
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFD-EMPQRNVVTWSGMMYGYAQMGENE 199
Query: 303 KALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALV 362
+AL F + + N+++FSS+I CAN LE G +HG +K +FD FV S+LV
Sbjct: 200 EALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLV 259
Query: 363 DMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAV 422
+Y KCG+ + + Q+F+E+ N WN ++ +AQH + IE F M G+KPN +
Sbjct: 260 SLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFI 319
Query: 423 TFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINS 482
TF+N+L CSHAG+V++G YF M K + P ++HY ++D+LGRAG+L+E + I +
Sbjct: 320 TFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITN 378
Query: 483 MPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDV 542
MP +PT W + L +C H + E A AA K+ +L P +SG H+ LSN YA + ++ED
Sbjct: 379 MPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDA 438
Query: 543 RCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYV 602
RK++RD KK G SWV+ N+ H F + H + KEIYEKL L ++++ GY+
Sbjct: 439 AKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYI 498
Query: 603 PQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYI 662
T VL E+D K + + HSER+A+A+ L+ P +PI V KNLRVC DCH+A K++
Sbjct: 499 ADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFM 558
Query: 663 SKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
S T R IIVRD +RFH F +G CSC DYW
Sbjct: 559 SVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 203/376 (53%), Gaps = 2/376 (0%)
Query: 19 VAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS 78
+ L+ + A+ + KG QLH +++ G + N+L+N YSK + + F+
Sbjct: 18 ICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSP 77
Query: 79 KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ 138
+++ +W+++I+ F ++ +L+ +M A L S ++CA L G
Sbjct: 78 QKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRS 137
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGN 198
VHCL +K+G+ ++F+GS+L DMY+KCGE+ A K+F+EMP ++ V W+ M+ GY + G
Sbjct: 138 VHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGE 197
Query: 199 FEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNA 258
E+AL +K+ + +N+ ++ + S +S C G+ +H + +K F+ +F+G++
Sbjct: 198 NEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSS 257
Query: 259 LTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEP 318
L LYSK G A VF ++ +N+ + A++ Y + +K + F ++ SG++P
Sbjct: 258 LVSLYSKCGVPEGAYQVF-NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKP 316
Query: 319 NEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLF 378
N TF +++ AC++ ++ G Q+ + + ++LVDM G+ G ++++
Sbjct: 317 NFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVI 376
Query: 379 DEIE-NPNDTAWNTLV 393
+ +P ++ W L+
Sbjct: 377 TNMPIDPTESVWGALL 392
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 171/365 (46%), Gaps = 42/365 (11%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + ++CA G+ +H ++ G F+ + L+++Y+KCGE+ YA K+F
Sbjct: 115 DDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMF 174
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
D M +RN+V+W+ M+ G+ + EAL F + E + ++ SSV+ CA+ ++
Sbjct: 175 DEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLE 234
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G Q+H L +KS F F+GS+L +YSKCG A +VF E+P K+ +W +M+ Y
Sbjct: 235 LGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYA 294
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
++ + +K + +K+M + + + L+AC+ HA +V G Y
Sbjct: 295 QHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS-----------HAGLVDEGRYY--- 340
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
D + S + +D + ++VD +L++AL + N
Sbjct: 341 ------------FDQMKESRIEPTDK------HYASLVDMLGRAGRLQEALEV---ITNM 379
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS---ALVDMYGKCGLF 371
I+P E + +L+ +C E + +V F+ P S +L + Y G F
Sbjct: 380 PIDPTESVWGALLTSCTVHKNTELAAFAADKV----FELGPVSSGMHISLSNAYAADGRF 435
Query: 372 DHSIQ 376
+ + +
Sbjct: 436 EDAAK 440
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 6/210 (2%)
Query: 6 LFRFRHKLCDSKAV-----AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNL 60
L+ F+ L ++ AV + +I CA + L G+Q+H I+ +F+ + L++L
Sbjct: 202 LWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSL 261
Query: 61 YSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFAL 120
YSKCG + A ++F+ + +N+ W AM+ + + ++ ++ F +M+ G +
Sbjct: 262 YSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITF 321
Query: 121 SSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPC 180
+VL AC+ G + G + +S ++L DM + G + +A +V MP
Sbjct: 322 LNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPI 381
Query: 181 -KDEVLWTSMIDGYVKNGNFEKALIAYKKM 209
E +W +++ + N E A A K+
Sbjct: 382 DPTESVWGALLTSCTVHKNTELAAFAADKV 411
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/584 (35%), Positives = 342/584 (58%), Gaps = 2/584 (0%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
++ CA + G QLH ++ G + N LL++YSKCG D A KLF MS+ +
Sbjct: 245 VLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRAD 304
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
V+W MI+G+ +S E+L F +M + G SS+L + + ++++ Q+HC
Sbjct: 305 TVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHC 364
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
+++ ++FL S L D Y KC VS A +F + D V++T+MI GY+ NG +
Sbjct: 365 YIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYID 424
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
+L ++ +V + ++ L S L L A G+ LH I+K GF+ IG A+ D
Sbjct: 425 SLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVID 484
Query: 262 LYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEF 321
+Y+K G M A +F+ S R+IVS+ +++ + D A++ F + SGI +
Sbjct: 485 MYAKCGRMNLAYEIFERLSK-RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCV 543
Query: 322 TFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEI 381
+ S+ + ACAN G +HG ++K + D + S L+DMY KCG ++ +F +
Sbjct: 544 SISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM 603
Query: 382 ENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDR-GLKPNAVTFVNLLKGCSHAGMVEDG 440
+ N +WN+++ HG ++++ F+EMV++ G++P+ +TF+ ++ C H G V++G
Sbjct: 604 KEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEG 663
Query: 441 LNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACK 500
+ +F SM + YG+ P++EHY C++DL GRAG+L E + + SMPF P A W + LGAC+
Sbjct: 664 VRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACR 723
Query: 501 THGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGY 560
H + E A++A+ KLM L+P NSG +VL+SN +A R+WE V +R ++++ ++K+PGY
Sbjct: 724 LHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGY 783
Query: 561 SWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQ 604
SW++I TH+F D +HP IY L+SLL ++++ GY+PQ
Sbjct: 784 SWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQ 827
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 228/489 (46%), Gaps = 17/489 (3%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCT-FLTNHLLNLYSKCGELDYAIKLFDRMSKR 80
L++ C K KG + + + C F+ + L+ Y + G++D KLFDR+ ++
Sbjct: 144 LVKACVALKNF-KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK 202
Query: 81 NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVH 140
+ V W M+ G+ + + F MR + + + VL CAS I GVQ+H
Sbjct: 203 DCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLH 262
Query: 141 CLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFE 200
LVV SG E + ++L MYSKCG DA K+F M D V W MI GYV++G E
Sbjct: 263 GLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLME 322
Query: 201 KALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALT 260
++L + +M++ V D S L + + + + K +H I++ + F+ +AL
Sbjct: 323 ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Query: 261 DLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNE 320
D Y K + A N+F S ++V FTA++ GY+ +L F L I PNE
Sbjct: 383 DAYFKCRGVSMAQNIF-SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNE 441
Query: 321 FTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDE 380
T S++ L+ G LHG ++K FD + A++DMY KCG + + ++F+
Sbjct: 442 ITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFER 501
Query: 381 IENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG 440
+ + +WN+++ AQ AI+ F +M G+ + V+ L C++ G
Sbjct: 502 LSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFG 561
Query: 441 LNYFYSMDKIYGVMPREE------HYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCS 494
I+G M + + +ID+ + G LK + +M E W S
Sbjct: 562 -------KAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNS 613
Query: 495 FLGACKTHG 503
+ AC HG
Sbjct: 614 IIAACGNHG 622
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 216/428 (50%), Gaps = 6/428 (1%)
Query: 4 RNLFRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSK 63
RN RF + + ++ L+Q C+ L +GKQ+HA LI ++ +L +Y+
Sbjct: 24 RNSSRFLEETIPRR-LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAM 82
Query: 64 CGELDYAIKLFDRMSKR--NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALS 121
CG K+F R+ R ++ W ++I+ F R+ +AL + +M G +
Sbjct: 83 CGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFP 142
Query: 122 SVLQACASLGSIQFGVQVHCLVVKS-GFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPC 180
+++AC +L + + G+ V S G C F+ S+L Y + G++ K+F+ +
Sbjct: 143 CLVKACVALKNFK-GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQ 201
Query: 181 KDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSL 240
KD V+W M++GY K G + + + M D + + LS C + G L
Sbjct: 202 KDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 261
Query: 241 HAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQ 300
H ++V G ++E I N+L +YSK G AS +F+ S + V++ ++ GYV+
Sbjct: 262 HGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRA-DTVTWNCMISGYVQSGL 320
Query: 301 LEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSA 360
+E++L F ++ +SG+ P+ TFSSL+ + + LE+ +H +++ + D F++SA
Sbjct: 321 MEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSA 380
Query: 361 LVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPN 420
L+D Y KC + +F + + + + ++ + +GL +++E F +V + PN
Sbjct: 381 LIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPN 440
Query: 421 AVTFVNLL 428
+T V++L
Sbjct: 441 EITLVSIL 448
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 200/390 (51%), Gaps = 4/390 (1%)
Query: 13 LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIK 72
L D+ + L+ + ++ + L KQ+H ++R FLT+ L++ Y KC + A
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396
Query: 73 LFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGS 132
+F + + ++V +TAMI+G+ + + ++L+ F + + ++ L S+L L +
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA 456
Query: 133 IQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDG 192
++ G ++H ++K GF +G + DMY+KCG ++ A ++FE + +D V W SMI
Sbjct: 457 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITR 516
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
++ N A+ +++M + D + + LSAC L + SFGK++H ++K +
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASD 576
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL- 311
+ + L D+Y+K G++ +A NVF++ +NIVS+ +I+ +L+ +L F ++
Sbjct: 577 VYSESTLIDMYAKCGNLKAAMNVFKTMKE-KNIVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 312 RNSGIEPNEFTFSSLIKACANQAKLEHG-SLLHGQVVKFNFDRDPFVSSALVDMYGKCGL 370
SGI P++ TF +I +C + ++ G + + +VD++G+ G
Sbjct: 636 EKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGR 695
Query: 371 FDHSIQLFDEIENPNDTA-WNTLVGVFAQH 399
+ + + P D W TL+G H
Sbjct: 696 LTEAYETVKSMPFPPDAGVWGTLLGACRLH 725
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 156/315 (49%), Gaps = 3/315 (0%)
Query: 120 LSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP 179
LS +LQAC++ ++ G QVH ++ + + + + MY+ CG SD K+F +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 180 CKDEVL--WTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFG 237
+ + W S+I +V+NG +AL Y KM+ V D + AC ALK F
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 238 KSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVE 297
L + G + F+ ++L Y + G + S +F ++ V + +++GY +
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQ-KDCVIWNVMLNGYAK 216
Query: 298 MDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFV 357
L+ + F +R I PN TF ++ CA++ ++ G LHG VV D + +
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 358 SSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGL 417
++L+ MY KCG FD + +LF + + WN ++ + Q GL ++ F EM+ G+
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 418 KPNAVTFVNLLKGCS 432
P+A+TF +LL S
Sbjct: 337 LPDAITFSSLLPSVS 351
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 133/310 (42%), Gaps = 8/310 (2%)
Query: 199 FEKALIAYKK---MVTDNVFIDQHV---LCSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
F A+ YKK + + F+++ + L L AC+ GK +HA ++ +
Sbjct: 10 FAPAIAPYKKSLPLRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGD 69
Query: 253 TFIGNALTDLYSKSGDMVSASNVF-QSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL 311
++ + +Y+ G +F + D +I + +I+ +V L +AL + +
Sbjct: 70 SYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKM 129
Query: 312 RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLF 371
G+ P+ TF L+KAC + L V D + FV+S+L+ Y + G
Sbjct: 130 LCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKI 189
Query: 372 DHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGC 431
D +LFD + + WN ++ +A+ G + I+ F+ M + PNAVTF +L C
Sbjct: 190 DVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVC 249
Query: 432 SHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFG 491
+ +++ G+ + + + GV N ++ + + G+ + M T
Sbjct: 250 ASKLLIDLGVQ-LHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTW 308
Query: 492 WCSFLGACKT 501
C G ++
Sbjct: 309 NCMISGYVQS 318
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/640 (36%), Positives = 354/640 (55%), Gaps = 45/640 (7%)
Query: 55 NHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET 114
N +++ +CG+++ A+KLFD M +R++VSWTAM+ G FRS + +A F QM + +T
Sbjct: 101 NSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-DT 159
Query: 115 ASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKV 174
A A +S++ G +QFG +V DA K+
Sbjct: 160 A---AWNSMVH-----GYLQFG------------------------------KVDDALKL 181
Query: 175 FEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAF 234
F++MP K+ + WT+MI G +N +AL +K M+ + ++AC AF
Sbjct: 182 FKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAF 241
Query: 235 SFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDG 294
G +H +I+K GF YE ++ +L Y+ + + VF + +TA++ G
Sbjct: 242 HMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVH-EQVAVWTALLSG 300
Query: 295 YVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRD 354
Y + E AL+ F + + I PN+ TF+S + +C+ L+ G +HG VK + D
Sbjct: 301 YSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETD 360
Query: 355 PFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVD 414
FV ++LV MY G + ++ +F +I + +WN+++ AQHG G+ A F +M+
Sbjct: 361 AFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIR 420
Query: 415 RGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPRE-EHYNCIIDLLGRAGKL 473
+P+ +TF LL CSH G +E G FY M + R+ +HY C++D+LGR GKL
Sbjct: 421 LNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKL 480
Query: 474 KEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIY 533
KE E+ I M +P W + L AC+ H D +R + AA + L+ ++S A+VLLSNIY
Sbjct: 481 KEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIY 540
Query: 534 AKERQWEDVRCLR-KMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSL 592
A +W +V LR KM ++G MKK PG SWV I + H F D P IYEKL+ L
Sbjct: 541 ASAGRWSNVSKLRVKMKKNGIMKK-PGSSWVVIRGKKHEFFSGD--QPHCSRIYEKLEFL 597
Query: 593 LDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVC 652
+++K +GY P S L +++D KE++L HSER+A+A+ L+ + G + V KNLRVC
Sbjct: 598 REKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVC 657
Query: 653 SDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
DCH+ K IS V R I++RD RFHHF NG+CSCGDYW
Sbjct: 658 EDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 169/377 (44%), Gaps = 39/377 (10%)
Query: 5 NLFRFRHKLC---DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLY 61
+LF+ + C S+ +I CA A G Q+H +I+ G L +++ L+ Y
Sbjct: 211 DLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFY 270
Query: 62 SKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALS 121
+ C + + K+FD + WTA+++G+ + + +AL F M +Q +
Sbjct: 271 ANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFA 330
Query: 122 SVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK 181
S L +C++LG++ +G ++H + VK G + F+G++L MYS G V+DA VF ++ K
Sbjct: 331 SGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKK 390
Query: 182 DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLH 241
V W S+I G ++G + A + + +M+ N D+ LSAC+ G+ L
Sbjct: 391 SIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKL- 449
Query: 242 AIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQL 301
F Y M S N R I +T +VD +L
Sbjct: 450 -------FYY-----------------MSSGINHID-----RKIQHYTCMVDILGRCGKL 480
Query: 302 EKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSAL 361
++A + ++PNE + +L+ AC + ++ G + FN D + L
Sbjct: 481 KEAEEL---IERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAI--FNLDSKSSAAYVL 535
Query: 362 V-DMYGKCGLFDHSIQL 377
+ ++Y G + + +L
Sbjct: 536 LSNIYASAGRWSNVSKL 552
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 166/379 (43%), Gaps = 28/379 (7%)
Query: 167 EVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKM-----VTDNVFIDQHVL 221
+ +A +VF ++P L+T MI GY ++ AL + +M V+ N I V
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVE 109
Query: 222 CSTLSACTAL-----------------KAFSFGKSLHAIIVKFGFEY-ETFIGNALTDLY 263
C ++ L F GK A + + +T N++ Y
Sbjct: 110 CGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGY 169
Query: 264 SKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTF 323
+ G + A +F+ G +N++S+T ++ G + ++ +AL+ F ++ I+ F
Sbjct: 170 LQFGKVDDALKLFKQMPG-KNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPF 228
Query: 324 SSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN 383
+ +I ACAN G +HG ++K F + +VS++L+ Y C S ++FDE +
Sbjct: 229 TCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVH 288
Query: 384 PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNY 443
W L+ ++ + +A+ F+ M+ + PN TF + L CS G ++ G
Sbjct: 289 EQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEM 348
Query: 444 FYSMDKIYGVMPREEHYNCIIDLLGRAGKLKE-VEDFINSMPFEPTAFGWCSFLGACKTH 502
K+ G+ N ++ + +G + + V FI F+ + W S + C H
Sbjct: 349 HGVAVKL-GLETDAFVGNSLVVMYSDSGNVNDAVSVFIK--IFKKSIVSWNSIIVGCAQH 405
Query: 503 GDKERAKLAAYKLMKLEPE 521
G + A + ++++L E
Sbjct: 406 GRGKWAFVIFGQMIRLNKE 424
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/616 (35%), Positives = 353/616 (57%), Gaps = 11/616 (1%)
Query: 83 VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCL 142
+S +I + + ++A+ Q + SQ ++ C S+ ++VH
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 143 VVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKA 202
++ +G + FL + L MYS G V A KVF++ + +W ++ G+ E+
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 203 LIAYKKMVTDNVFIDQHVLCSTLSACTA----LKAFSFGKSLHAIIVKFGFEYETFIGNA 258
L Y KM V D+ L AC A + GK +HA + + G+ +I
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 259 LTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIE- 317
L D+Y++ G + AS VF RN+VS++A++ Y + + +AL F ++ +
Sbjct: 223 LVDMYARFGCVDYASYVF-GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDS 281
Query: 318 -PNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQ 376
PN T S+++ACA+ A LE G L+HG +++ D V SALV MYG+CG + +
Sbjct: 282 SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQR 341
Query: 377 LFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGM 436
+FD + + + +WN+L+ + HG G+ AI+ F EM+ G P VTFV++L CSH G+
Sbjct: 342 VFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGL 401
Query: 437 VEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFL 496
VE+G F +M + +G+ P+ EHY C++DLLGRA +L E + M EP W S L
Sbjct: 402 VEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL 461
Query: 497 GACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKK 556
G+C+ HG+ E A+ A+ +L LEP+N+G +VLL++IYA+ + W++V+ ++K++ ++K
Sbjct: 462 GSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQK 521
Query: 557 LPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTL 616
LPG W+++ + + F D +P ++I+ L L + +K GY+PQT+ VL E++
Sbjct: 522 LPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEE 581
Query: 617 KEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDIS 676
KE+++ HSE++A+A+ L+ + G+PI + KNLR+C DCH K+ISK E+ I+VRD++
Sbjct: 582 KERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVN 641
Query: 677 RFHHFSNGSCSCGDYW 692
RFH F NG CSCGDYW
Sbjct: 642 RFHRFKNGVCSCGDYW 657
Score = 169 bits (427), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 189/388 (48%), Gaps = 11/388 (2%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
LI C LS ++H ++ G FL L+ +YS G +DYA K+FD+ KR
Sbjct: 83 LILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRT 142
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACA----SLGSIQFGV 137
+ W A+ + E L + +M G + +F + VL+AC ++ + G
Sbjct: 143 IYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGK 202
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNG 197
++H + + G+ +++ + L DMY++ G V A VF MP ++ V W++MI Y KNG
Sbjct: 203 EIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNG 262
Query: 198 NFEKALIAYKKMV--TDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFI 255
+AL +++M+ T + + + S L AC +L A GK +H I++ G + +
Sbjct: 263 KAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPV 322
Query: 256 GNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSG 315
+AL +Y + G + VF R++VS+ +++ Y +KA+ F ++ +G
Sbjct: 323 ISALVTMYGRCGKLEVGQRVFDRMHD-RDVVSWNSLISSYGVHGYGKKAIQIFEEMLANG 381
Query: 316 IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFDH 373
P TF S++ AC+++ +E G L + + + P + + +VD+ G+ D
Sbjct: 382 ASPTPVTFVSVLGACSHEGLVEEGKRLFETMWR-DHGIKPQIEHYACMVDLLGRANRLDE 440
Query: 374 SIQLFDEIEN-PNDTAWNTLVGVFAQHG 400
+ ++ ++ P W +L+G HG
Sbjct: 441 AAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 102/197 (51%), Gaps = 2/197 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
+S + ++Q CA L +GK +H ++R G + + L+ +Y +CG+L+ ++F
Sbjct: 284 NSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVF 343
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
DRM R++VSW ++I+ + ++A+ F +M A G + + SVL AC+ G ++
Sbjct: 344 DRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403
Query: 135 FGVQV-HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKD-EVLWTSMIDG 192
G ++ + G ++ + + D+ + + +A K+ ++M + +W S++
Sbjct: 404 EGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463
Query: 193 YVKNGNFEKALIAYKKM 209
+GN E A A +++
Sbjct: 464 CRIHGNVELAERASRRL 480
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 194/459 (42%), Positives = 299/459 (65%), Gaps = 4/459 (0%)
Query: 236 FGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGY 295
G+++H+++++ GF ++ N+L LY+ GD+ SA VF +++V++ ++++G+
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE-KDLVAWNSVINGF 64
Query: 296 VEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDP 355
E + E+AL + ++ + GI+P+ FT SL+ ACA L G +H ++K R+
Sbjct: 65 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 124
Query: 356 FVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEM-VD 414
S+ L+D+Y +CG + + LFDE+ + N +W +L+ A +G G+ AIE F M
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 184
Query: 415 RGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLK 474
GL P +TFV +L CSH GMV++G YF M + Y + PR EH+ C++DLL RAG++K
Sbjct: 185 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 244
Query: 475 EVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYA 534
+ ++I SMP +P W + LGAC HGD + A+ A ++++LEP +SG +VLLSN+YA
Sbjct: 245 KAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA 304
Query: 535 KERQWEDVRCLRK-MIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLL 593
E++W DV+ +RK M+RDG +KK+PG+S V++GN H F + D SHP+ IY KL +
Sbjct: 305 SEQRWSDVQKIRKQMLRDG-VKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT 363
Query: 594 DQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCS 653
+++ GYVPQ +V +++++ KE + HSE+IA+A+ L+ +P PI V KNLRVC+
Sbjct: 364 GRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 423
Query: 654 DCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
DCH A K +SKV R I+VRD SRFHHF NGSCSC DYW
Sbjct: 424 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 147/275 (53%), Gaps = 6/275 (2%)
Query: 130 LGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSM 189
+ ++ G +H +V++SGFG +++ ++L +Y+ CG+V+ A KVF++MP KD V W S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 190 IDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF 249
I+G+ +NG E+AL Y +M + + D + S LSAC + A + GK +H ++K G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 250 EYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFI 309
N L DLY++ G + A +F +N VS+T+++ G ++A+ F
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD-KNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 310 DLRNS-GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYG 366
+ ++ G+ P E TF ++ AC++ ++ G + + ++ + +P + +VD+
Sbjct: 180 YMESTEGLLPCEITFVGILYACSHCGMVKEG-FEYFRRMREEYKIEPRIEHFGCMVDLLA 238
Query: 367 KCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHG 400
+ G + + + PN W TL+G HG
Sbjct: 239 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 143/273 (52%), Gaps = 28/273 (10%)
Query: 35 GKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFR 94
G+ +H+ +IR G ++ N LL+LY+ CG++ A K+FD+M ++++V+W ++I GF
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 95 SLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFL 154
+ + EAL + +M ++G F + S+L ACA +G++ G +VH ++K G L
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 155 GSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKM-VTDN 213
+ L D+Y++CG V +A +F+EM K+ V WTS+I G NG ++A+ +K M T+
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 214 VFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEY--------------ETFIGNAL 259
+ + L AC+ H +VK GFEY E F +
Sbjct: 187 LLPCEITFVGILYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEHF--GCM 233
Query: 260 TDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIV 292
DL +++G + A +S N+V + ++
Sbjct: 234 VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 334 AKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLV 393
A + G +H V++ F +V ++L+ +Y CG + ++FD++ + AWN+++
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 61
Query: 394 GVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGV 453
FA++G A+ + EM +G+KP+ T V+LL C+ G + G M K+ G+
Sbjct: 62 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-GL 120
Query: 454 MPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHG-DKERAKLAA 512
N ++DL R G+++E + + M + + W S + +G KE +L
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 513 Y 513
Y
Sbjct: 180 Y 180
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + L+ CA+ L+ GK++H +I+ G +N LL+LY++CG ++ A LF
Sbjct: 88 DGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 147
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRA-EGETASQFALSSVLQACASLGSI 133
D M +N VSWT++I G + +EA++ F M + EG + +L AC+ G +
Sbjct: 148 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMV 207
Query: 134 QFGVQVHCLVVK--------SGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEV 184
+ G + + + FGC + D+ ++ G+V A + + MP + + V
Sbjct: 208 KEGFEYFRRMREEYKIEPRIEHFGC-------MVDLLARAGQVKKAYEYIKSMPMQPNVV 260
Query: 185 LWTSMIDGYVKNGNFEKALIA 205
+W +++ +G+ + A A
Sbjct: 261 IWRTLLGACTVHGDSDLAEFA 281
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/679 (33%), Positives = 366/679 (53%), Gaps = 42/679 (6%)
Query: 19 VAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS 78
+ Q++ T + L + +H+++I + L L+ Y+ ++ A K+FD +
Sbjct: 45 LGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIP 101
Query: 79 KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ 138
+RN++ MI + + + E + F M + VL+AC+ G+I G +
Sbjct: 102 ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRK 161
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGN 198
+H K G LF+G+ L MY KCG +S+A V +EM +D V W S++ GY +N
Sbjct: 162 IHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQR 221
Query: 199 FEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNA 258
F+ AL ++M + + D + S L A S + + + VK
Sbjct: 222 FDDALEVCREMESVKISHDAGTMASLLPA------VSNTTTENVMYVK------------ 263
Query: 259 LTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEP 318
D++ K G +++VS+ ++ Y++ +A+ + + G EP
Sbjct: 264 --DMFFKMGK--------------KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEP 307
Query: 319 NEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLF 378
+ + +S++ AC + + L G +HG + + + + +AL+DMY KCG + + +F
Sbjct: 308 DAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVF 367
Query: 379 DEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVE 438
+ +++ + +W ++ + G G +A+ F+++ D GL P+++ FV L CSHAG++E
Sbjct: 368 ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLE 427
Query: 439 DGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGA 498
+G + F M Y + PR EH C++DLLGRAGK+KE FI M EP W + LGA
Sbjct: 428 EGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
Query: 499 CKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLP 558
C+ H D + LAA KL +L PE SG +VLLSNIYAK +WE+V +R +++ +KK P
Sbjct: 488 CRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNP 547
Query: 559 GYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKE 618
G S V++ H F V D SHP+ EIY +LD L+ ++K +GYVP +ES L ++++ KE
Sbjct: 548 GASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKE 607
Query: 619 KLLHNHSERIAVAYSLLVSP-----IGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVR 673
L HSE++A+ ++L+ + I + KNLR+C DCH A K IS++T R II+R
Sbjct: 608 THLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIR 667
Query: 674 DISRFHHFSNGSCSCGDYW 692
D +RFH F G CSCGDYW
Sbjct: 668 DTNRFHVFRFGVCSCGDYW 686
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ ++ ++ C LS GK++H + R +P L N L+++Y+KCG L+ A +F
Sbjct: 308 DAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVF 367
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ M R++VSWTAMI+ + S R +A+ F +++ G A + L AC+ G ++
Sbjct: 368 ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLE 427
Query: 135 FGVQVHCLVVKS-GFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMIDG 192
G L+ L + + D+ + G+V +A + ++M + +E +W +++
Sbjct: 428 EGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
Query: 193 YVKNGNFEKALIAYKKM 209
+ + + L+A K+
Sbjct: 488 CRVHSDTDIGLLAADKL 504
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/604 (35%), Positives = 342/604 (56%), Gaps = 14/604 (2%)
Query: 93 FRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCEL 152
++SL F E++ + M G + F+ +L++CASL G Q+HC V K G E
Sbjct: 30 YQSL-FSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEP 88
Query: 153 FLGSNLTDMYSKCGEVSDACKVFEEMPCKDE--VLWTSMIDGYVKNGNFEKALIAYKKMV 210
F+ + L MY KCG V+DA KVFEE P + V + ++I GY N A +++M
Sbjct: 89 FVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMK 148
Query: 211 TDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMV 270
V +D + + CT + G+SLH VK G + E + N+ +Y K G +
Sbjct: 149 ETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVE 208
Query: 271 SASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKAC 330
+ +F + + ++++ A++ GY + L + +++SG+ P+ FT S++ +C
Sbjct: 209 AGRRLFD-EMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSC 267
Query: 331 ANQAKLEHGSLLHGQVVKFN-FDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAW 389
A+ + G + G++V+ N F + FVS+A + MY +CG + +FD + + +W
Sbjct: 268 AHLGAKKIGHEV-GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSW 326
Query: 390 NTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDK 449
++G + HG+G + F++M+ RG++P+ FV +L CSH+G+ + GL F +M +
Sbjct: 327 TAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKR 386
Query: 450 IYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAK 509
Y + P EHY+C++DLLGRAG+L E +FI SMP EP W + LGACK H + + A+
Sbjct: 387 EYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAE 446
Query: 510 LAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNET 569
LA K+++ EP N G +VL+SNIY+ + E + +R M+R+ +K PGYS+V+
Sbjct: 447 LAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRV 506
Query: 570 HVFGVEDWSHPRKKEIYEKLDSLLDQI-KIVGYVPQTESVLIEMDDTLKEKLLHNHSERI 628
H+F D SH + +E++ LD L + ++ G + E+ T +E HSER+
Sbjct: 507 HLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGE--EVSSTTRE-----HSERL 559
Query: 629 AVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSC 688
A+A+ +L S G I+V KNLRVC DCH K +SK+ +R +VRD SRFH+F +G CSC
Sbjct: 560 AIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSC 619
Query: 689 GDYW 692
DYW
Sbjct: 620 KDYW 623
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 200/418 (47%), Gaps = 7/418 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ + ++++CA G+QLH + +GGC F+ L+++Y KCG + A K+F
Sbjct: 52 DAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVF 111
Query: 75 DRMSKRNMVS--WTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGS 132
+ + + +S + A+I+G+ + + +A F +M+ G + + ++ C
Sbjct: 112 EENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEY 171
Query: 133 IQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDG 192
+ G +H VK G E+ + ++ MY KCG V ++F+EMP K + W ++I G
Sbjct: 172 LWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISG 231
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
Y +NG L Y++M + V D L S LS+C L A G + ++ GF
Sbjct: 232 YSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPN 291
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR 312
F+ NA +Y++ G++ A VF +++VS+TA++ Y E L F D+
Sbjct: 292 VFVSNASISMYARCGNLAKARAVFDIMP-VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMI 350
Query: 313 NSGIEPNEFTFSSLIKACANQAKLEHG-SLLHGQVVKFNFDRDPFVSSALVDMYGKCGLF 371
GI P+ F ++ AC++ + G L ++ + P S LVD+ G+ G
Sbjct: 351 KRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRL 410
Query: 372 DHSIQLFDEIE-NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLL 428
D +++ + + P+ W L+G H A F ++++ +PN + + L+
Sbjct: 411 DEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGYYVLM 466
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/588 (35%), Positives = 345/588 (58%), Gaps = 5/588 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D ++ ++ C+ L GKQ+HA ++R G L N L++ Y KCG + A KLF
Sbjct: 248 DGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLF 307
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ M +N++SWT +++G+ ++ +EA++ F M G +A SS+L +CASL ++
Sbjct: 308 NGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALG 367
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
FG QVH +K+ G + ++ ++L DMY+KC ++DA KVF+ D VL+ +MI+GY
Sbjct: 368 FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYS 427
Query: 195 KNGN---FEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEY 251
+ G +AL ++ M + S L A +L + K +H ++ K+G
Sbjct: 428 RLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL 487
Query: 252 ETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL 311
+ F G+AL D+YS + + VF + +++V + ++ GYV+ + E+ALN F++L
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFD-EMKVKDLVIWNSMFAGYVQQSENEEALNLFLEL 546
Query: 312 RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLF 371
+ S P+EFTF++++ A N A ++ G H Q++K + +P++++AL+DMY KCG
Sbjct: 547 QLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSP 606
Query: 372 DHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGC 431
+ + + FD + + WN+++ +A HG G+ A++ +M+ G++PN +TFV +L C
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC 666
Query: 432 SHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFG 491
SHAG+VEDGL F M + +G+ P EHY C++ LLGRAG+L + + I MP +P A
Sbjct: 667 SHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIV 725
Query: 492 WCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRD 551
W S L C G+ E A+ AA + +P++SG+ +LSNIYA + W + + +R+ ++
Sbjct: 726 WRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKV 785
Query: 552 GNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIV 599
+ K PG SW+ I E H+F +D SH + +IYE LD LL QI+ V
Sbjct: 786 EGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGV 833
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/444 (31%), Positives = 251/444 (56%), Gaps = 14/444 (3%)
Query: 17 KAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDR 76
+ A+L+Q A L +H Q+I G T+L+N L+NLYS+ G + YA K+F++
Sbjct: 45 REFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEK 104
Query: 77 MSKRNMVSWTAMITGFFRSLRFREALDTFCQM-RAEGETASQFALSSVLQACASL-GSIQ 134
M +RN+VSW+ M++ + E+L F + R ++ +++ LSS +QAC+ L G +
Sbjct: 105 MPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGR 164
Query: 135 FGV-QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
+ V Q+ +VKSGF ++++G+ L D Y K G + A VF+ +P K V WT+MI G
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
VK G +L + +++ DNV D ++L + LSAC+ L GK +HA I+++G E +
Sbjct: 225 VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
+ N L D Y K G +++A +F +NI+S+T ++ GY + ++A+ F +
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPN-KNIISWTTLLSGYKQNALHKEAMELFTSMSK 343
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
G++P+ + SS++ +CA+ L G+ +H +K N D +V+++L+DMY KC
Sbjct: 344 FGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403
Query: 374 SIQLFDEIENPNDTAWNTLVGVFAQHGLG---RNAIETFNEMVDRGLKPNAVTFVNLLKG 430
+ ++FD + +N ++ +++ G A+ F +M R ++P+ +TFV+LL+
Sbjct: 404 ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLR- 462
Query: 431 CSHAGMVEDGLNYFYSMDKIYGVM 454
+ A + GL+ +I+G+M
Sbjct: 463 -ASASLTSLGLS-----KQIHGLM 480
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 143/523 (27%), Positives = 258/523 (49%), Gaps = 14/523 (2%)
Query: 7 FRFRHKLCDSKAVAQLIQTCAQAKELSKGK----QLHAQLIRGGCLPCTFLTNHLLNLYS 62
+R R + ++ IQ C+ +G+ QL + L++ G ++ L++ Y
Sbjct: 137 WRTRKDSPNEYILSSFIQACSGLD--GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYL 194
Query: 63 KCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSS 122
K G +DYA +FD + +++ V+WT MI+G + R +L F Q+ + + LS+
Sbjct: 195 KDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILST 254
Query: 123 VLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKD 182
VL AC+ L ++ G Q+H +++ G + L + L D Y KCG V A K+F MP K+
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKN 314
Query: 183 EVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHA 242
+ WT+++ GY +N ++A+ + M + D + S L++C +L A FG +HA
Sbjct: 315 IISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHA 374
Query: 243 IIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMD--- 299
+K ++++ N+L D+Y+K + A VF + ++V F A+++GY +
Sbjct: 375 YTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAA-DVVLFNAMIEGYSRLGTQW 433
Query: 300 QLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS 359
+L +ALN F D+R I P+ TF SL++A A+ L +HG + K+ + D F S
Sbjct: 434 ELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGS 493
Query: 360 ALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKP 419
AL+D+Y C S +FDE++ + WN++ + Q A+ F E+ +P
Sbjct: 494 ALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERP 553
Query: 420 NAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDF 479
+ TF N++ + V+ G + + K G+ N ++D+ + G ++
Sbjct: 554 DEFTFANMVTAAGNLASVQLGQEFHCQLLK-RGLECNPYITNALLDMYAKCGSPEDAHKA 612
Query: 480 INSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMK--LEP 520
+S W S + + HG+ ++A K+M +EP
Sbjct: 613 FDSAASRDVV-CWNSVISSYANHGEGKKALQMLEKMMSEGIEP 654
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 93/199 (46%), Gaps = 7/199 (3%)
Query: 323 FSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE 382
F+ L++ A+ L + +++HGQ++ + + D ++S+ L+++Y + G ++ ++F+++
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 383 NPNDTAWNTLVGVFAQHGLGRNAIETFNEM-VDRGLKPNAVTFVNLLKGCSHAGMVEDGL 441
N +W+T+V HG+ ++ F E R PN + ++ CS G+ G
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGR 164
Query: 442 NYFYSMDK--IYGVMPREEHY-NCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGA 498
+ + + R+ + +ID + G + +++P E + W + +
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISG 223
Query: 499 CKTHGDKERAKLAAYKLMK 517
C G + Y+LM+
Sbjct: 224 CVKMGRSYVSLQLFYQLME 242
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/680 (32%), Positives = 369/680 (54%), Gaps = 20/680 (2%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
+I++ A L +GK++HA +I+ G + ++ N L++LY K G A K+F+ M +R+
Sbjct: 136 VIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERD 195
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
+VSW +MI+G+ +L F +M G +F+ S L AC+ + S + G ++HC
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC 255
Query: 142 LVVKSGFGC-ELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFE 200
V+S ++ + +++ DMYSK GEVS A ++F M ++ V W MI Y +NG
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315
Query: 201 KALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALT 260
A + ++KM N + L +A+ G+++H ++ GF + AL
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPASAILE---GRTIHGYAMRRGFLPHMVLETALI 372
Query: 261 DLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNE 320
D+Y + G + SA +F + +N++S+ +I+ YV+ + AL F +L +S + P+
Sbjct: 373 DMYGECGQLKSAEVIFDRMAE-KNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDS 431
Query: 321 FTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDE 380
T +S++ A A L G +H +VK + + + ++LV MY CG + + + F+
Sbjct: 432 TTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNH 491
Query: 381 IENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG 440
I + +WN+++ +A HG GR ++ F+EM+ + PN TF +LL CS +GMV++G
Sbjct: 492 ILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEG 551
Query: 441 LNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACK 500
YF SM + YG+ P EHY C++DL+GR G + F+ MPF PTA W S L A +
Sbjct: 552 WEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASR 611
Query: 501 THGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGY 560
H D A+ AA ++ K+E +N+G +VLL N+YA+ +WEDV ++ ++ + +
Sbjct: 612 NHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSR 671
Query: 561 SWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKL 620
S V+ ++HVF D SH +IYE LD +V + E + + L+ +
Sbjct: 672 STVEAKGKSHVFTNGDRSHVATNKIYEVLD-------VVSRMVGEEDIYVHCVSRLRPET 724
Query: 621 L--------HNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIV 672
L HS R+A + L+ + G+ + V+ N R+C CH + S++T R I+V
Sbjct: 725 LVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVV 784
Query: 673 RDISRFHHFSNGSCSCGDYW 692
D FHHFSNG CSCG+YW
Sbjct: 785 GDSKIFHHFSNGRCSCGNYW 804
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 224/445 (50%), Gaps = 21/445 (4%)
Query: 67 LDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQA 126
++ A++LFD M+K + W MI GF + EA+ + +M G A F V+++
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 127 CASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLW 186
A + S++ G ++H +V+K GF ++++ ++L +Y K G DA KVFEEMP +D V W
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 187 TSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVK 246
SMI GY+ G+ +L+ +K+M+ D+ S L AC+ + + GK +H V+
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 247 FGFEY-ETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKAL 305
E + + ++ D+YSK G++ A +F RNIV++ ++ Y ++ A
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQ-RNIVAWNVMIGCYARNGRVTDAF 318
Query: 306 NAFIDL-RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDM 364
F + +G++P+ T +L+ A A + G +HG ++ F + +AL+DM
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDM 374
Query: 365 YGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTF 424
YG+CG + +FD + N +WN+++ + Q+G +A+E F E+ D L P++ T
Sbjct: 375 YGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTI 434
Query: 425 VNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHY------NCIIDLLGRAGKLKEVED 478
++L + + + +G +I+ + + ++ N ++ + G L++
Sbjct: 435 ASILPAYAESLSLSEG-------REIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARK 487
Query: 479 FINSMPFEPTAFGWCSFLGACKTHG 503
N + + W S + A HG
Sbjct: 488 CFNHILLKDVV-SWNSIIMAYAVHG 511
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 104/207 (50%), Gaps = 7/207 (3%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS +A ++ A++ LS+G+++HA +++ T + N L+++Y+ CG+L+ A K F
Sbjct: 430 DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCF 489
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ + +++VSW ++I + R ++ F +M A ++ +S+L AC+ G +
Sbjct: 490 NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVD 549
Query: 135 FGVQVHCLVVKSGFGCELFLGSN--LTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDG 192
G + + +K +G + + + D+ + G S A + EEMP + T+ I G
Sbjct: 550 EGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP----FVPTARIWG 604
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQH 219
+ N + I + + +F +H
Sbjct: 605 SLLNASRNHKDITIAEFAAEQIFKMEH 631
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 354 DPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMV 413
DP ++ AL + L + ++QLFDE+ + WN ++ F GL A++ ++ MV
Sbjct: 64 DPALTRALRG-FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 414 DRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKL 473
G+K + T+ ++K + +E+G ++M G + N +I L + G
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEG-KKIHAMVIKLGFVSDVYVCNSLISLYMKLGCA 181
Query: 474 KEVEDFINSMPFEPTAFGWCSFLGACKTHGD 504
+ E MP E W S + GD
Sbjct: 182 WDAEKVFEEMP-ERDIVSWNSMISGYLALGD 211
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 234/648 (36%), Positives = 352/648 (54%), Gaps = 40/648 (6%)
Query: 18 AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM 77
+ +++ C L +G+Q+H I+ G + N LL +Y++C + A LF+ M
Sbjct: 127 TLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETM 186
Query: 78 S-KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFG 136
++N V+WT+M+TG+ ++ +A++ F +R EG ++Q+ SVL ACAS+ + + G
Sbjct: 187 EGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVG 246
Query: 137 VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKN 196
VQVHC +VKSGF +++ S L DMY+KC E+ A + E M D V W SMI G V+
Sbjct: 247 VQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQ 306
Query: 197 GNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALK--AFSFGKSLHAIIVKFGFEYETF 254
G +AL + +M ++ ID + S L+ C AL S H +IVK G+
Sbjct: 307 GLIGEALSMFGRMHERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKL 365
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+ NAL D+Y+K G M SA VF+ ++++S+TA+V G ++AL F ++R
Sbjct: 366 VNNALVDMYAKRGIMDSALKVFEGMIE-KDVISWTALVTGNTHNGSYDEALKLFCNMRVG 424
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
GI P++ +S++ A A LE G +HG +K F V+++LV MY KCG + +
Sbjct: 425 GITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDA 484
Query: 375 IQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHA 434
N I FN M R L +T+ L+ G +
Sbjct: 485 -----------------------------NVI--FNSMEIRDL----ITWTCLIVGYAKN 509
Query: 435 GMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCS 494
G++ED YF SM +YG+ P EHY C+IDL GR+G +VE ++ M EP A W +
Sbjct: 510 GLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKA 569
Query: 495 FLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNM 554
L A + HG+ E + AA LM+LEP N+ +V LSN+Y+ + ++ +R++++ N+
Sbjct: 570 ILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNI 629
Query: 555 KKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDD 614
K PG SWV+ + H F ED HPR EIY K+D ++ IK GY L ++D
Sbjct: 630 SKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDK 689
Query: 615 TLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYI 662
KE L HSE++AVA+ LLV P G PI + KNLRVC DCHSA K +
Sbjct: 690 EGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 232/455 (50%), Gaps = 12/455 (2%)
Query: 52 FLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAE 111
F N ++ YS L A KLF +N +SW A+I+G+ +S EA + F +M+++
Sbjct: 60 FTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSD 119
Query: 112 GETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDA 171
G +++ L SVL+ C SL + G Q+H +K+GF ++ + + L MY++C +S+A
Sbjct: 120 GIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEA 179
Query: 172 CKVFEEMPC-KDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTA 230
+FE M K+ V WTSM+ GY +NG KA+ ++ + + +Q+ S L+AC +
Sbjct: 180 EYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACAS 239
Query: 231 LKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTA 290
+ A G +H IVK GF+ ++ +AL D+Y+K +M SA + + ++VS+ +
Sbjct: 240 VSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGME-VDDVVSWNS 298
Query: 291 IVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACA-NQAKLEHGSLLHGQVVKF 349
++ G V + +AL+ F + ++ ++FT S++ A ++ +++ S H +VK
Sbjct: 299 MIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKT 358
Query: 350 NFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETF 409
+ V++ALVDMY K G+ D ++++F+ + + +W LV +G A++ F
Sbjct: 359 GYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLF 418
Query: 410 NEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGL----NYFYSMDKIYGVMPREEHYNCIID 465
M G+ P+ + ++L + ++E G NY S G N ++
Sbjct: 419 CNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKS-----GFPSSLSVNNSLVT 473
Query: 466 LLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACK 500
+ + G L++ NSM C +G K
Sbjct: 474 MYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAK 508
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 35/197 (17%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D A ++ A+ L G+Q+H I+ G + N L+ +Y+KCG L+ A +F
Sbjct: 429 DKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIF 488
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ M R++++WT +I G+ ++ +A F MR ++ I
Sbjct: 489 NSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMR-------------------TVYGIT 529
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMIDGY 193
G + + C + D++ + G+ ++ +M + D +W +++
Sbjct: 530 PGPE--------HYAC-------MIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAAS 574
Query: 194 VKNGNFEKALIAYKKMV 210
K+GN E A K ++
Sbjct: 575 RKHGNIENGERAAKTLM 591
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 26/199 (13%)
Query: 323 FSSLIKACANQAKLEHGSLLHGQVVKFN--------FD----RDPFVSSALVDMYGKCGL 370
F S I + A++ KL H +LL G + K FD RD F + ++ Y
Sbjct: 16 FGSCIHSYADRTKL-HSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRR 74
Query: 371 FDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKG 430
+ +LF N +WN L+ + + G A F EM G+KPN T ++L+
Sbjct: 75 LSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRM 134
Query: 431 CSHAGMVEDGLNYFYSMDKIYGVMPRE------EHYNCIIDLLGRAGKLKEVEDFINSMP 484
C+ ++ G ++I+G + N ++ + + ++ E E +M
Sbjct: 135 CTSLVLLLRG-------EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME 187
Query: 485 FEPTAFGWCSFLGACKTHG 503
E W S L +G
Sbjct: 188 GEKNNVTWTSMLTGYSQNG 206
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/542 (37%), Positives = 317/542 (58%), Gaps = 3/542 (0%)
Query: 153 FLGSN-LTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVT 211
++ SN L + Y + G++ +A KVF+EMP + W +MI G ++ E+ L +++M
Sbjct: 25 YMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHG 84
Query: 212 DNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVS 271
D++ L S S L++ S G+ +H +K+G E + + ++L +Y ++G +
Sbjct: 85 LGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQD 144
Query: 272 ASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACA 331
V +S RN+V++ ++ G + E L + ++ SG PN+ TF +++ +C+
Sbjct: 145 GEIVIRS-MPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Query: 332 NQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNT 391
+ A G +H + +K V S+L+ MY KCG + + F E E+ ++ W++
Sbjct: 204 DLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSS 263
Query: 392 LVGVFAQHGLGRNAIETFNEMVDR-GLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKI 450
++ + HG G AIE FN M ++ ++ N V F+NLL CSH+G+ + GL F M +
Sbjct: 264 MISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK 323
Query: 451 YGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKL 510
YG P +HY C++DLLGRAG L + E I SMP + W + L AC H + E A+
Sbjct: 324 YGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQR 383
Query: 511 AAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETH 570
++++++P +S +VLL+N++A ++W DV +RK +RD N+KK G SW + E H
Sbjct: 384 VFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVH 443
Query: 571 VFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAV 630
F + D S + KEIY L L ++K+ GY P T SVL +MD+ KE L HSE++AV
Sbjct: 444 QFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAV 503
Query: 631 AYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGD 690
A++L++ P G PI + KNLRVCSDCH AFKYIS + R I +RD SRFHHF NG CSCGD
Sbjct: 504 AFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGD 563
Query: 691 YW 692
YW
Sbjct: 564 YW 565
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 173/370 (46%), Gaps = 6/370 (1%)
Query: 54 TNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGE 113
+N L+N Y + G+L A K+FD M R + +W AMI G + E L F +M G
Sbjct: 28 SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87
Query: 114 TASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACK 173
+ ++ L SV A L S+ G Q+H +K G +L + S+L MY + G++ D
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 174 VFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKA 233
V MP ++ V W ++I G +NG E L YK M ++ + LS+C+ L
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207
Query: 234 FSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVD 293
G+ +HA +K G + ++L +YSK G + A+ F S+ + V +++++
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF-SEREDEDEVMWSSMIS 266
Query: 294 GYVEMDQLEKALNAFIDL-RNSGIEPNEFTFSSLIKACANQAKLEHG-SLLHGQVVKFNF 351
Y Q ++A+ F + + +E NE F +L+ AC++ + G L V K+ F
Sbjct: 267 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGF 326
Query: 352 DRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTA-WNTLVGVFAQHGLGRNAIETFN 410
+ +VD+ G+ G D + + + D W TL+ H A F
Sbjct: 327 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 386
Query: 411 EMVDRGLKPN 420
E++ + PN
Sbjct: 387 EILQ--IDPN 394
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 148/321 (46%), Gaps = 7/321 (2%)
Query: 5 NLFRFRHKL---CDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLY 61
+LFR H L D + + A + +S G+Q+H I+ G + + L ++Y
Sbjct: 77 SLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMY 136
Query: 62 SKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALS 121
+ G+L + M RN+V+W +I G ++ L + M+ G ++
Sbjct: 137 MRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFV 196
Query: 122 SVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK 181
+VL +C+ L G Q+H +K G + + S+L MYSKCG + DA K F E +
Sbjct: 197 TVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE 256
Query: 182 DEVLWTSMIDGYVKNGNFEKALIAYKKMVTD-NVFIDQHVLCSTLSACTALKAFSFGKSL 240
DEV+W+SMI Y +G ++A+ + M N+ I++ + L AC+ G L
Sbjct: 257 DEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLEL 316
Query: 241 HAIIV-KFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMD 299
++V K+GF+ + DL ++G + A + +S +IV + ++
Sbjct: 317 FDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHK 376
Query: 300 QLEKALNAFIDLRNSGIEPNE 320
E A F ++ I+PN+
Sbjct: 377 NAEMAQRVFKEILQ--IDPND 395
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/582 (36%), Positives = 333/582 (57%), Gaps = 9/582 (1%)
Query: 115 ASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKV 174
A+ A ++++A + +Q QVH ++ +G+G L + L + ++ +
Sbjct: 7 ANSAAYEAIVRAGPRVKQLQ---QVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLL 63
Query: 175 FEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAF 234
F +P D+ L+ S+I K + Y++M++ NV + S + +C L A
Sbjct: 64 FLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSAL 123
Query: 235 SFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDG 294
GK +H V GF +T++ AL YSK GDM A VF ++IV++ ++V G
Sbjct: 124 RIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPE-KSIVAWNSLVSG 182
Query: 295 YVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRD 354
+ + ++A+ F +R SG EP+ TF SL+ ACA + GS +H ++ D +
Sbjct: 183 FEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLN 242
Query: 355 PFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVD 414
+ +AL+++Y +CG + ++FD+++ N AW ++ + HG G+ A+E FN+M D
Sbjct: 243 VKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMED 302
Query: 415 R-GLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKL 473
G PN VTFV +L C+HAG+VE+G + + M K Y ++P EH+ C++D+LGRAG L
Sbjct: 303 DCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFL 362
Query: 474 KEVEDFINSMPFEPTAFG---WCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLS 530
E FI+ + A W + LGACK H + + A +L+ LEP+N G HV+LS
Sbjct: 363 DEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLS 422
Query: 531 NIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLD 590
NIYA + ++V +R + N++K GYS +++ N+T++F + D SH EIY L+
Sbjct: 423 NIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLE 482
Query: 591 SLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLR 650
+L+ + K +GY P +E V+ ++++ KE L HSE++AVA+ LL + I + KNLR
Sbjct: 483 TLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLL-KTVDVAITIVKNLR 541
Query: 651 VCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
+C DCHSAFKYIS V+ R I VRD RFHHF NGSCSC DYW
Sbjct: 542 ICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 187/392 (47%), Gaps = 12/392 (3%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
+S A +++ + K+L +Q+HA LI G L L+ L + Y LF
Sbjct: 8 NSAAYEAIVRAGPRVKQL---QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLF 64
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ + + ++I + + + +M + + S + +SV+++CA L +++
Sbjct: 65 LSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALR 124
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G VHC V SGFG + ++ + L YSKCG++ A +VF+ MP K V W S++ G+
Sbjct: 125 IGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFE 184
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+NG ++A+ + +M D S LSAC A S G +H I+ G +
Sbjct: 185 QNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVK 244
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+G AL +LYS+ GD+ A VF N+ ++TA++ Y ++A+ F + +
Sbjct: 245 LGTALINLYSRCGDVGKAREVFDKMKET-NVAAWTAMISAYGTHGYGQQAVELFNKMEDD 303
Query: 315 -GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS--ALVDMYGKCGLF 371
G PN TF +++ ACA+ +E G ++ ++ K ++ P V +VDM G+ G
Sbjct: 304 CGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTK-SYRLIPGVEHHVCMVDMLGRAGFL 362
Query: 372 DHSIQLFDEIENPNDTA----WNTLVGVFAQH 399
D + + +++ W ++G H
Sbjct: 363 DEAYKFIHQLDATGKATAPALWTAMLGACKMH 394
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/681 (32%), Positives = 361/681 (53%), Gaps = 4/681 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + ++ CA+ +E+ GK +H ++ L N L+++YSKCG + A +F
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 350
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGE--TASQFALSSVLQACASLGS 132
+ +N+VSW M+ GF D QM A GE A + + + + C
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Query: 133 IQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDG 192
+ ++HC +K F + + Y+KCG +S A +VF + K W ++I G
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
+ ++ + +L A+ +M + D +CS LSAC+ LK+ GK +H I++ E +
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR 312
F+ ++ LY G++ + +F + +++VS+ ++ GY++ ++AL F +
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMED-KSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Query: 313 NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
GI+ + + AC+ L G H +K + D F++ +L+DMY K G
Sbjct: 590 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 649
Query: 373 HSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
S ++F+ ++ + +WN ++ + HGL + AI+ F EM G P+ +TF+ +L C+
Sbjct: 650 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709
Query: 433 HAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKL-KEVEDFINSMPFEPTAFG 491
H+G++ +GL Y M +G+ P +HY C+ID+LGRAG+L K + M E
Sbjct: 710 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGI 769
Query: 492 WCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRD 551
W S L +C+ H + E + A KL +LEPE +VLLSN+YA +WEDVR +R+ + +
Sbjct: 770 WKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNE 829
Query: 552 GNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIE 611
+++K G SW+++ + F V + +EI L +I +GY P T SV +
Sbjct: 830 MSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHD 889
Query: 612 MDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNII 671
+ + K + L HSE++A+ Y L+ + G I V KNLR+C DCH+A K ISKV ER I+
Sbjct: 890 LSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIV 949
Query: 672 VRDISRFHHFSNGSCSCGDYW 692
VRD RFHHF NG CSCGDYW
Sbjct: 950 VRDNKRFHHFKNGVCSCGDYW 970
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 250/517 (48%), Gaps = 26/517 (5%)
Query: 17 KAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCT--FLTNHLLNLYSKCGELDYAIKLF 74
+A+ L+Q + K++ G+++H QL+ G L ++ +Y+ CG D + +F
Sbjct: 85 EALGLLLQASGKRKDIEMGRKIH-QLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVF 143
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET-ASQFALSSVLQACASLGSI 133
D + +N+ W A+I+ + R+ + E L+TF +M + + F V++ACA + +
Sbjct: 144 DALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 203
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
G+ VH LVVK+G ++F+G+ L Y G V+DA ++F+ MP ++ V W SMI +
Sbjct: 204 GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 263
Query: 194 VKNGNFEKALIAYKKMVTDN----VFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF 249
NG E++ + +M+ +N D L + L C + GK +H VK
Sbjct: 264 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRL 323
Query: 250 EYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFI 309
+ E + NAL D+YSK G + +A +F+ ++ +N+VS+ +V G+ +
Sbjct: 324 DKELVLNNALMDMYSKCGCITNAQMIFKMNNN-KNVVSWNTMVGGFSAEGDTHGTFDVLR 382
Query: 310 DLRNSG--IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGK 367
+ G ++ +E T + + C +++ L LH +K F + V++A V Y K
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 368 CGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNL 427
CG ++ ++F I + +WN L+G AQ R +++ +M GL P++ T +L
Sbjct: 443 CGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSL 502
Query: 428 LKGCSHAGMVEDGLNYFYSMDKIYGVMPREEH------YNCIIDLLGRAGKLKEVEDFIN 481
L CS + G +++G + R Y ++ L G+L V+ +
Sbjct: 503 LSACSKLKSLRLG-------KEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 555
Query: 482 SMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKL 518
+M + + W + + +G +RA L ++ M L
Sbjct: 556 AME-DKSLVSWNTVITGYLQNGFPDRA-LGVFRQMVL 590
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 156/358 (43%), Gaps = 36/358 (10%)
Query: 13 LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIK 72
L DS V L+ C++ K L GK++H +IR F+ +L+LY CGEL
Sbjct: 493 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQA 552
Query: 73 LFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGS 132
LFD M +++VSW +ITG+ ++ AL F QM G ++ V AC+ L S
Sbjct: 553 LFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS 612
Query: 133 IQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDG 192
++ G + H +K + F+ +L DMY+K G ++ + KVF + K W +MI G
Sbjct: 613 LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 672
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
Y +G ++A+ +++M D L+AC H+ ++ G Y
Sbjct: 673 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN-----------HSGLIHEGLRY- 720
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQSDSGCR-NIVSFTAIVDGYVEMDQLEKALNAFIDL 311
+ +S G + N+ + ++D QL+KAL +
Sbjct: 721 --------------------LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEE 760
Query: 312 RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCG 369
+ E + + SL+ +C LE G + ++ + ++ P L ++Y G
Sbjct: 761 MSE--EADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEK-PENYVLLSNLYAGLG 815
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 13/255 (5%)
Query: 190 IDGYVKNGNFEKALIAYKKMVTDN------VFIDQHVLCSTLSACTALKAFSFGKSLHAI 243
I + + G+ +K+ ++ V D+ + + L L A K G+ +H +
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 244 IV-KFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLE 302
+ + + + +Y+ G + VF + +N+ + A++ Y + +
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS-KNLFQWNAVISSYSRNELYD 168
Query: 303 KALNAFIDL-RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSAL 361
+ L FI++ + + P+ FT+ +IKACA + + G +HG VVK D FV +AL
Sbjct: 169 EVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNAL 228
Query: 362 VDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMV----DRGL 417
V YG G ++QLFD + N +WN+++ VF+ +G + EM+ D
Sbjct: 229 VSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAF 288
Query: 418 KPNAVTFVNLLKGCS 432
P+ T V +L C+
Sbjct: 289 MPDVATLVTVLPVCA 303
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/719 (30%), Positives = 378/719 (52%), Gaps = 74/719 (10%)
Query: 12 KLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAI 71
K DS V +L+Q C+ + ++G+Q+H ++R G + N L+ +YS+ G+L+ +
Sbjct: 86 KAYDSTMV-KLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSR 144
Query: 72 KLFDRMSKRNM-----------------------------------VSWTAMITGFFRSL 96
K+F+ M RN+ V+W ++++G+
Sbjct: 145 KVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKG 204
Query: 97 RFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGS 156
++A+ +M+ G S ++SS+LQA A G ++ G +H ++++ ++++ +
Sbjct: 205 LSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVET 264
Query: 157 NLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFI 216
L DMY K G + A VF+ M K+ V W S++ G ++Y ++ D
Sbjct: 265 TLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSG-----------LSYACLLKD---- 309
Query: 217 DQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNV- 275
++L + K G + + N+L Y+ G A +V
Sbjct: 310 --------------------AEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 276 --FQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQ 333
+ N+VS+TAI G + AL FI ++ G+ PN T S+L+K
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCL 409
Query: 334 AKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLV 393
+ L G +HG ++ N D +V++ALVDMYGK G +I++F I+N + +WN ++
Sbjct: 410 SLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCML 469
Query: 394 GVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGV 453
+A G G I F+ M++ G++P+A+TF ++L C ++G+V++G YF M YG+
Sbjct: 470 MGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGI 529
Query: 454 MPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAY 513
+P EH +C++DLLGR+G L E DFI +M +P A W +FL +CK H D E A++A
Sbjct: 530 IPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWK 589
Query: 514 KLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFG 573
+L LEP NS ++++ N+Y+ +WEDV +R ++R+ ++ +SW+ I H+F
Sbjct: 590 RLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFY 649
Query: 574 VEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYS 633
E +HP + +IY +L L+ ++K GYVP T + ++ D+ KEKLL H+E++A+ Y
Sbjct: 650 AEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYG 709
Query: 634 LLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
L+ PI V KN +CSD H+ KY+S + R I++++ +R HHF +G CSC D W
Sbjct: 710 LIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 177/376 (47%), Gaps = 38/376 (10%)
Query: 135 FGVQVHCLVVKSGF-GCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
G+ +H ++K G + + S Y +C + A K+F+EMP +D++ W ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
+++GN+EKA+ +++M + L C+ + F+ G+ +H +++ G E
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVD-----GYVE-----MDQLE- 302
+ N+L +YS++G + + VF S RN+ S+ +I+ GYV+ +D++E
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKD-RNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 303 ------------------------KALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEH 338
A+ ++ +G++P+ + SSL++A A L+
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 339 GSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQ 398
G +HG +++ D +V + L+DMY K G ++ +FD ++ N AWN+LV +
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 399 HGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREE 458
L ++A M G+KP+A+T+ +L G + G E L+ M K GV P
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM-KEKGVAPNVV 362
Query: 459 HYNCIIDLLGRAGKLK 474
+ I + G +
Sbjct: 363 SWTAIFSGCSKNGNFR 378
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/603 (35%), Positives = 330/603 (54%), Gaps = 34/603 (5%)
Query: 124 LQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDE 183
LQ CA ++ +H +VK G L + L ++Y KCG S A +VF+EMP +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 184 VLWTSMIDGYVKNGNFEKALIAYKKMVTDNVF-IDQHVLCSTLSACTALKAFSFGKSLHA 242
+ W S++ + K L + + + + D V + + AC L + G+ +H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 243 IIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS-----------------DSG---- 281
+ + + + ++L D+Y+K G + SA VF S SG
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 282 ---------CRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEP-NEFTFSSLIKACA 331
+N+ S+TA++ G+V+ + +A + F ++R ++ + SS++ ACA
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 332 NQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNT 391
N A G +HG V+ FD F+S+AL+DMY KC + +F + + + +W +
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 392 LVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIY 451
L+ AQHG A+ +++MV G+KPN VTFV L+ CSH G VE G F SM K Y
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 452 GVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERA-KL 510
G+ P +HY C++DLLGR+G L E E+ I++MPF P W + L ACK G + ++
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Query: 511 AAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETH 570
A + + + ++ ++LLSNIYA W V R+ + + ++K PG+S V++ ET
Sbjct: 430 ADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETE 489
Query: 571 VFGVEDWSHPRKKEIYEKLDSLLDQIKIV-GYVPQTESVLIEMDDTLKEKLLHNHSERIA 629
VF + SHP K++I+ L L ++++I GYVP T +L +MD+ KEKLL HSER A
Sbjct: 490 VFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSA 549
Query: 630 VAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCG 689
VAY LL + G PI + KNLRVC DCH K+IS++TER IIVRD +R+HHF G CSC
Sbjct: 550 VAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCN 609
Query: 690 DYW 692
D+W
Sbjct: 610 DFW 612
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 231/441 (52%), Gaps = 38/441 (8%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM 82
+Q CA+ + L+ K LHA +++ G + C L N L+N+Y KCG +A+++FD M R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 83 VSWTAMITGFFRS-LRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
++W +++T ++ L + + G F S++++ACA+LGSI G QVHC
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
+ S + + + S+L DMY+KCG ++ A VF+ + K+ + WT+M+ GY K+G E+
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 202 ALIAYKKMVTDNVF--------------------------------IDQHVLCSTLSACT 229
AL ++ + N++ +D VL S + AC
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 230 ALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFT 289
L A G+ +H +++ GF+ FI NAL D+Y+K D+++A ++F S R++VS+T
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIF-SRMRHRDVVSWT 308
Query: 290 AIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF 349
+++ G + Q EKAL + D+ + G++PNE TF LI AC++ +E G L + K
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTK- 367
Query: 350 NFDRDPFVS--SALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHGLGRNAI 406
++ P + + L+D+ G+ GL D + L + P++ W L+ + G G+ I
Sbjct: 368 DYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGI 427
Query: 407 ETFNEMVDRGLKPNAVTFVNL 427
+ +V + T++ L
Sbjct: 428 RIADHLVSSFKLKDPSTYILL 448
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 68/390 (17%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + L++ CA + G+Q+H I + + L+++Y+KCG L+ A +F
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALD------------------------------- 103
D + +N +SWTAM++G+ +S R EAL+
Sbjct: 164 DSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFS 223
Query: 104 TFCQMRAEG-ETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMY 162
F +MR E + LSS++ ACA+L + G QVH LV+ GF +F+ + L DMY
Sbjct: 224 VFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMY 283
Query: 163 SKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLC 222
+KC +V A +F M +D V WTS+I G ++G EKAL Y MV+ V ++
Sbjct: 284 AKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFV 343
Query: 223 STLSACTALKAFSFGKSLHAIIVK-FGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSG 281
+ AC+ + G+ L + K +G L DL +SG + A N+ +
Sbjct: 344 GLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT--- 400
Query: 282 CRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSL 341
P+E T+++L+ AC Q + + G
Sbjct: 401 --------------------------------MPFPPDEPTWAALLSACKRQGRGQMGIR 428
Query: 342 LHGQVVKFNFDRDPFVSSALVDMYGKCGLF 371
+ +V +DP L ++Y L+
Sbjct: 429 IADHLVSSFKLKDPSTYILLSNIYASASLW 458
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 110/228 (48%), Gaps = 4/228 (1%)
Query: 8 RFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGEL 67
R R + D ++ ++ CA G+Q+H +I G C F++N L+++Y+KC ++
Sbjct: 230 RERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDV 289
Query: 68 DYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQAC 127
A +F RM R++VSWT++I G + + +AL + M + G ++ ++ AC
Sbjct: 290 IAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYAC 349
Query: 128 ASLGSIQFGVQVHCLVVKS-GFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP-CKDEVL 185
+ +G ++ G ++ + K G L + L D+ + G + +A + MP DE
Sbjct: 350 SHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPT 409
Query: 186 WTSMIDGYVKNGNFEKALIAYKKMVTDNVFID--QHVLCSTLSACTAL 231
W +++ + G + + +V+ D ++L S + A +L
Sbjct: 410 WAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASL 457
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/647 (35%), Positives = 354/647 (54%), Gaps = 34/647 (5%)
Query: 55 NHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET 114
N L++ Y K + A +F+ M +RN+VSWTAM+ G+ + EA F +M E
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV 142
Query: 115 ASQFALSSVLQACASLGSIQFGVQVHCLV-VKSGFGCELFLGSNLTDMYSKCGEVSDACK 173
+ ++ G I +++ ++ VK ++ +N+ + G V +A
Sbjct: 143 SWTVMFGGLIDD----GRIDKARKLYDMMPVK-----DVVASTNMIGGLCREGRVDEARL 193
Query: 174 VFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDN-VFIDQHVLCSTLSA-CTAL 231
+F+EM ++ V WT+MI GY +N + A ++ M V +L TLS
Sbjct: 194 IFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDA 253
Query: 232 KAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAI 291
+ F + +I NA+ + + G++ A VF R+ ++ +
Sbjct: 254 EEFFEVMPMKPVIA----------CNAMIVGFGEVGEISKARRVFDLMED-RDNATWRGM 302
Query: 292 VDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNF 351
+ Y +AL+ F ++ G+ P+ + S++ CA A L++G +H +V+ F
Sbjct: 303 IKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQF 362
Query: 352 DRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNE 411
D D +V+S L+ MY KCG + +FD + + WN+++ +A HGLG A++ F+E
Sbjct: 363 DDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHE 422
Query: 412 MVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAG 471
M G PN VT + +L CS+AG +E+GL F SM+ + V P EHY+C +D+LGRAG
Sbjct: 423 MPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAG 482
Query: 472 KLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSN 531
++ + + I SM +P A W + LGACKTH + A++AA KL + EP+N+G +VLLS+
Sbjct: 483 QVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSS 542
Query: 532 IYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVF---GVEDWSHPRKKEI--- 585
I A +W DV +RK +R N+ K PG SW+++G + H+F G+++ HP + I
Sbjct: 543 INASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKN--HPEQAMILMM 600
Query: 586 YEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIV 645
EK D LL + GY P VL ++D+ K L HSER+AVAY LL P G PI V
Sbjct: 601 LEKTDGLLRE---AGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRV 657
Query: 646 KKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
KNLRVC DCH+A K ISKVTER II+RD +RFHHF+NG CSC DYW
Sbjct: 658 MKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 7/215 (3%)
Query: 18 AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM 77
++ ++ CA L G+Q+HA L+R ++ + L+ +Y KCGEL A +FDR
Sbjct: 333 SLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRF 392
Query: 78 SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
S ++++ W ++I+G+ EAL F +M + G ++ L ++L AC+ G ++ G+
Sbjct: 393 SSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGL 452
Query: 138 QV-HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMIDGYVK 195
++ + K + S DM + G+V A ++ E M K D +W +++
Sbjct: 453 EIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKT 512
Query: 196 NGNFEKALIAYKKMV---TDNVFIDQHVLCSTLSA 227
+ + A +A KK+ DN +VL S+++A
Sbjct: 513 HSRLDLAEVAAKKLFENEPDNA--GTYVLLSSINA 545
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 103/234 (44%), Gaps = 22/234 (9%)
Query: 257 NALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI 316
N++ Y +G A +F S RN+VS+ +V GY++ + +A N F +
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSE-RNVVSWNGLVSGYIKNRMIVEARNVFELMP---- 106
Query: 317 EPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQ 376
E N ++++++K + + L ++ + N + L+D G D + +
Sbjct: 107 ERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLID----DGRIDKARK 162
Query: 377 LFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGM 436
L+D + + A ++G + G A F+EM +R N VT+ ++ G
Sbjct: 163 LYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRER----NVVTWTTMITGYRQNNR 218
Query: 437 VEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGR--AGKLKEVEDFINSMPFEPT 488
V+ K++ VMP + + LLG +G++++ E+F MP +P
Sbjct: 219 VDVA-------RKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPV 265
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/649 (34%), Positives = 347/649 (53%), Gaps = 62/649 (9%)
Query: 52 FLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSL-RFREALDTFCQMRA 110
F N ++ + G++D A+++F M +N ++W +++ G + R EA F ++
Sbjct: 62 FPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEI-P 120
Query: 111 EGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSD 170
E +T S + + + C V F
Sbjct: 121 EPDTFS------------------YNIMLSCYVRNVNF--------------------EK 142
Query: 171 ACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKM-----VTDNVFIDQHVLCSTL 225
A F+ MP KD W +MI GY + G EKA + M V+ N I ++ C L
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDL 202
Query: 226 SACTALKAFSFGK--SLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCR 283
KA F K + ++ A+ Y K+ + A +F+ + +
Sbjct: 203 E-----KASHFFKVAPVRGVVA----------WTAMITGYMKAKKVELAEAMFKDMTVNK 247
Query: 284 NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLH 343
N+V++ A++ GYVE + E L F + GI PN SS + C+ + L+ G +H
Sbjct: 248 NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIH 307
Query: 344 GQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGR 403
V K D ++L+ MY KCG + +LF+ ++ + AWN ++ +AQHG
Sbjct: 308 QIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNAD 367
Query: 404 NAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCI 463
A+ F EM+D ++P+ +TFV +L C+HAG+V G+ YF SM + Y V P+ +HY C+
Sbjct: 368 KALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCM 427
Query: 464 IDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENS 523
+DLLGRAGKL+E I SMPF P A + + LGAC+ H + E A+ AA KL++L +N+
Sbjct: 428 VDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNA 487
Query: 524 GAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKK 583
+V L+NIYA + +WEDV +RK +++ N+ K+PGYSW++I N+ H F D HP
Sbjct: 488 AGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELD 547
Query: 584 EIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPI 643
I++KL L ++K+ GY P+ E L +++ KEKLL HSE++AVA+ + P G I
Sbjct: 548 SIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQI 607
Query: 644 IVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
V KNLR+C DCH A K+IS++ +R IIVRD +RFHHF +GSCSCGDYW
Sbjct: 608 QVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 173/374 (46%), Gaps = 13/374 (3%)
Query: 29 AKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAM 88
+K+ S+ + H QL P TF N +L+ Y + + A FDRM ++ SW M
Sbjct: 103 SKDPSRMMEAH-QLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTM 161
Query: 89 ITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGF 148
ITG+ R +A + F M + E + +S ++ C L H V
Sbjct: 162 ITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIE-CGDLEKAS-----HFFKVAPVR 215
Query: 149 GCELFLGSNLTDMYSKCGEVSDACKVFEEMPC-KDEVLWTSMIDGYVKNGNFEKALIAYK 207
G + + + Y K +V A +F++M K+ V W +MI GYV+N E L ++
Sbjct: 216 G--VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFR 273
Query: 208 KMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSG 267
M+ + + + L S L C+ L A G+ +H I+ K + +L +Y K G
Sbjct: 274 AMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCG 333
Query: 268 DMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLI 327
++ A +F+ +++V++ A++ GY + +KAL F ++ ++ I P+ TF +++
Sbjct: 334 ELGDAWKLFEVMKK-KDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVL 392
Query: 328 KACANQAKLEHG-SLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE-NPN 385
AC + + G + V + + P + +VD+ G+ G + +++L + P+
Sbjct: 393 LACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPH 452
Query: 386 DTAWNTLVGVFAQH 399
+ TL+G H
Sbjct: 453 AAVFGTLLGACRVH 466
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 4/202 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGG-CLPCTFLTNHLLNLYSKCGELDYAIKL 73
+S ++ + C++ L G+Q+H + + C T LT+ L+++Y KCGEL A KL
Sbjct: 283 NSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTS-LISMYCKCGELGDAWKL 341
Query: 74 FDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSI 133
F+ M K+++V+W AMI+G+ + +AL F +M +VL AC G +
Sbjct: 342 FEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLV 401
Query: 134 QFGVQ-VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDE-VLWTSMID 191
G+ +V + + + D+ + G++ +A K+ MP + ++ +++
Sbjct: 402 NIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLG 461
Query: 192 GYVKNGNFEKALIAYKKMVTDN 213
+ N E A A +K++ N
Sbjct: 462 ACRVHKNVELAEFAAEKLLQLN 483
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/609 (35%), Positives = 328/609 (53%), Gaps = 57/609 (9%)
Query: 138 QVHCLVVKSG------FGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMID 191
Q+H + +KSG E+ +D++ + ++ A K+F +MP ++ W ++I
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFNQMPQRNCFSWNTIIR 98
Query: 192 GYVKNGNFEKALIA----YKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKF 247
G+ ++ +KALIA Y+ M + V ++ S L AC GK +H + +K+
Sbjct: 99 GFSESDE-DKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKY 157
Query: 248 GFEYETFIGNALTDLYSKSGDMVSA-----SNVFQSD----------------------- 279
GF + F+ + L +Y G M A N+ + D
Sbjct: 158 GFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDG 217
Query: 280 ----SGC------------RNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTF 323
C R++VS+ ++ GY + A+ F +++ I PN T
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 324 SSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN 383
S++ A + LE G LH D + SAL+DMY KCG+ + +I +F+ +
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR 337
Query: 384 PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNY 443
N W+ ++ FA HG +AI+ F +M G++P+ V ++NLL CSH G+VE+G Y
Sbjct: 338 ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRY 397
Query: 444 FYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHG 503
F M + G+ PR EHY C++DLLGR+G L E E+FI +MP +P W + LGAC+ G
Sbjct: 398 FSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Query: 504 DKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWV 563
+ E K A LM + P +SGA+V LSN+YA + W +V +R +++ +++K PG S +
Sbjct: 458 NVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLI 517
Query: 564 DIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHN 623
DI H F VED SHP+ KEI L + D++++ GY P T VL+ +++ KE +LH
Sbjct: 518 DIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHY 577
Query: 624 HSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSN 683
HSE+IA A+ L+ + GKPI + KNLR+C DCHS+ K ISKV +R I VRD RFHHF +
Sbjct: 578 HSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQD 637
Query: 684 GSCSCGDYW 692
GSCSC DYW
Sbjct: 638 GSCSCMDYW 646
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 210/449 (46%), Gaps = 63/449 (14%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCG----ELDYAIKLFDRMS 78
I C ++LS Q+HA I+ G + T +L + +LDYA K+F++M
Sbjct: 30 INNCRTIRDLS---QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP 86
Query: 79 KRNMVSWTAMITGFFRSLRFRE--ALDTFCQMRA-EGETASQFALSSVLQACASLGSIQF 135
+RN SW +I GF S + A+ F +M + E ++F SVL+ACA G IQ
Sbjct: 87 QRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDA------------------------ 171
G Q+H L +K GFG + F+ SNL MY CG + DA
Sbjct: 147 GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDG 206
Query: 172 -----------------CK----VFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMV 210
CK +F++M + V W +MI GY NG F+ A+ +++M
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 211 TDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMV 270
++ + L S L A + L + G+ LH G + +G+AL D+YSK G +
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 326
Query: 271 SASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKAC 330
A +VF+ N+++++A+++G+ Q A++ F +R +G+ P++ + +L+ AC
Sbjct: 327 KAIHVFERLPR-ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTAC 385
Query: 331 ANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFDHSIQLFDEIE-NPNDT 387
++ +E G Q+V + +P + +VD+ G+ GL D + + + P+D
Sbjct: 386 SHGGLVEEGRRYFSQMVSVD-GLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDV 444
Query: 388 AWNTLVGVFAQHG---LGRNAIETFNEMV 413
W L+G G +G+ +MV
Sbjct: 445 IWKALLGACRMQGNVEMGKRVANILMDMV 473
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 146/321 (45%), Gaps = 43/321 (13%)
Query: 53 LTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEG 112
L N +++ Y + G+ A LFD+M +R++VSW MI+G+ + F++A++ F +M+
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 113 ETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDAC 172
+ L SVL A + LGS++ G +H SG + LGS L DMYSKCG + A
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 173 KVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALK 232
VFE +P ++ + W++MI+G+ +G A+ + KM V + L+AC+
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389
Query: 233 AFSFGKSLHAIIVKF-GFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAI 291
G+ + +V G E + DL +SG
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSG------------------------ 425
Query: 292 VDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNF 351
+D+ E+ FI N I+P++ + +L+ AC Q +E G +V
Sbjct: 426 -----LLDEAEE----FI--LNMPIKPDDVIWKALLGACRMQGNVEMGK----RVANILM 470
Query: 352 DRDPFVSSALV---DMYGKCG 369
D P S A V +MY G
Sbjct: 471 DMVPHDSGAYVALSNMYASQG 491
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 149/339 (43%), Gaps = 66/339 (19%)
Query: 221 LCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGN------ALTDLYSKSGDMVSASN 274
L ++ C ++ S +HA+ +K G +T A +DL+ + D+ A
Sbjct: 26 LFPQINNCRTIRDLS---QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHK 80
Query: 275 VFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNA----FIDLRNSGIEPNEFTFSSLIKAC 330
+F RN S+ I+ G+ E D+ +KAL A + + + +EPN FTF S++KAC
Sbjct: 81 IFNQMPQ-RNCFSWNTIIRGFSESDE-DKALIAITLFYEMMSDEFVEPNRFTFPSVLKAC 138
Query: 331 ANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCG-------LFDHSI-------- 375
A K++ G +HG +K+ F D FV S LV MY CG LF +I
Sbjct: 139 AKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVM 198
Query: 376 ------------------------------QLFDEIENPNDTAWNTLVGVFAQHGLGRNA 405
LFD++ + +WNT++ ++ +G ++A
Sbjct: 199 TDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDA 258
Query: 406 IETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG-LNYFYSMDKIYGVMPREEHYNCII 464
+E F EM ++PN VT V++L S G +E G + Y+ D G+ + + +I
Sbjct: 259 VEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDS--GIRIDDVLGSALI 316
Query: 465 DLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHG 503
D+ + G +++ +P E W + + HG
Sbjct: 317 DMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIHG 354
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 2/185 (1%)
Query: 18 AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM 77
+ ++ ++ L G+ LH G L + L+++YSKCG ++ AI +F+R+
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335
Query: 78 SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
+ N+++W+AMI GF + +A+D FC+MR G S A ++L AC+ G ++ G
Sbjct: 336 PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395
Query: 138 QVHCLVVK-SGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMIDGYVK 195
+ +V G + + D+ + G + +A + MP K D+V+W +++
Sbjct: 396 RYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRM 455
Query: 196 NGNFE 200
GN E
Sbjct: 456 QGNVE 460
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/585 (35%), Positives = 322/585 (55%), Gaps = 10/585 (1%)
Query: 26 CAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSW 85
C + +L G+ LH ++ G FL N L+++YSKCG+LD A+ LFDR +R+ VSW
Sbjct: 158 CGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSW 217
Query: 86 TAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACA---SLGSIQFGVQVHCL 142
++I+G+ R E L+ +M +G + +AL SVL+AC + G I+ G+ +HC
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCY 277
Query: 143 VVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNF--- 199
K G ++ + + L DMY+K G + +A K+F MP K+ V + +MI G+++
Sbjct: 278 TAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDE 337
Query: 200 --EKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGN 257
+A + M + L AC+A K +G+ +HA+I K F+ + FIG+
Sbjct: 338 ASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGS 397
Query: 258 ALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIE 317
AL +LY+ G F S S ++I S+T+++D +V+ +QLE A + F L +S I
Sbjct: 398 ALIELYALMGSTEDGMQCFASTSK-QDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIR 456
Query: 318 PNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQL 377
P E+T S ++ ACA+ A L G + G +K D V ++ + MY K G + Q+
Sbjct: 457 PEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQV 516
Query: 378 FDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMV 437
F E++NP+ ++ ++ AQHG A+ F M G+KPN F+ +L C H G+V
Sbjct: 517 FIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLV 576
Query: 438 EDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLG 497
GL YF M Y + P E+H+ C++DLLGR G+L + E+ I S F+ W + L
Sbjct: 577 TQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLS 636
Query: 498 ACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKL 557
+C+ + D K A +LM+LEPE SG++VLL NIY +R+++RD +KK
Sbjct: 637 SCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKE 696
Query: 558 PGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYV 602
P SW+ IGN+TH F V D SHP + IY L++ +D + V Y
Sbjct: 697 PALSWIVIGNQTHSFAVADLSHPSSQMIYTMLET-MDNVDFVDYT 740
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 159/559 (28%), Positives = 271/559 (48%), Gaps = 50/559 (8%)
Query: 7 FRFRHKLC-------DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLN 59
+RF LC DS+ L QT A++ + GK H +I+ PC +L N+LLN
Sbjct: 31 YRFLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLN 90
Query: 60 LYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFA 119
+Y KC EL +A +LFDRM +RN++S+ ++I+G+ + + +A++ F + R +F
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 120 LSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP 179
+ L C + G +H LVV +G ++FL + L DMYSKCG++ A +F+
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 180 CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSF--- 236
+D+V W S+I GYV+ G E+ L KM D + + + L S L AC F
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 237 GKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYV 296
G ++H K G E++ + AL D+Y+K+G + A +F S +N+V++ A++ G++
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLF-SLMPSKNVVTYNAMISGFL 329
Query: 297 EMDQL-----EKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNF 351
+MD++ +A F+D++ G+EP+ TFS ++KAC+ LE+G +H + K NF
Sbjct: 330 QMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 389
Query: 352 DRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNE 411
D F+ SAL+++Y G + +Q F + +W +++ Q+ +A + F +
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449
Query: 412 MVDRGLKPNAVTFVNLLKGCS-----------HAGMVEDGLNYF-------YSMDKIYGV 453
+ ++P T ++ C+ ++ G++ F SM G
Sbjct: 450 LFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGN 509
Query: 454 MPREEH------------YNCIIDLLGRAGKLKEVEDFINSMP---FEPTAFGWCSFLGA 498
MP Y+ +I L + G E + SM +P + L A
Sbjct: 510 MPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIA 569
Query: 499 CKTHGDKERAKLAAYKLMK 517
C HG L ++ MK
Sbjct: 570 C-CHGGLVTQGLKYFQCMK 587
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/609 (33%), Positives = 334/609 (54%), Gaps = 45/609 (7%)
Query: 122 SVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKC--GEVSD----ACKVF 175
S LQ C+ ++ Q+H ++K+G + + +T S C SD A VF
Sbjct: 19 SCLQRCSKQEELK---QIHARMLKTGLMQDSY---AITKFLSFCISSTSSDFLPYAQIVF 72
Query: 176 EEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFS 235
+ D LW MI G+ + E++L+ Y++M+ + + + S L AC+ L AF
Sbjct: 73 DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132
Query: 236 FGKSLHAIIVKFGFEYETFIGNALTDLYS------------------------------- 264
+HA I K G+E + + N+L + Y+
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 265 KSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFS 324
K+G M A +F+ + +N +S+T ++ GYV+ D ++AL F +++NS +EP+ + +
Sbjct: 193 KAGKMDIALTLFRKMAE-KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLA 251
Query: 325 SLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENP 384
+ + ACA LE G +H + K D + L+DMY KCG + ++++F I+
Sbjct: 252 NALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 311
Query: 385 NDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYF 444
+ AW L+ +A HG GR AI F EM G+KPN +TF +L CS+ G+VE+G F
Sbjct: 312 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 371
Query: 445 YSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGD 504
YSM++ Y + P EHY CI+DLLGRAG L E + FI MP +P A W + L AC+ H +
Sbjct: 372 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 431
Query: 505 KERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVD 564
E + L+ ++P + G +V +NI+A +++W+ R+++++ + K+PG S +
Sbjct: 432 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTIS 491
Query: 565 IGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEM-DDTLKEKLLHN 623
+ TH F D SHP ++I K + +++ GYVP+ E +L+++ DD +E ++H
Sbjct: 492 LEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQ 551
Query: 624 HSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSN 683
HSE++A+ Y L+ + G I + KNLRVC DCH K ISK+ +R+I++RD +RFHHF +
Sbjct: 552 HSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRD 611
Query: 684 GSCSCGDYW 692
G CSCGDYW
Sbjct: 612 GKCSCGDYW 620
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 204/424 (48%), Gaps = 45/424 (10%)
Query: 7 FRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNL---YSK 63
F H L ++ + +Q C++ +EL KQ+HA++++ G + ++ L+ +
Sbjct: 8 FSLEHNLYETMSC---LQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTS 61
Query: 64 CGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSV 123
L YA +FD + + W MI GF S +L + +M + + S+
Sbjct: 62 SDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSL 121
Query: 124 LQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDE 183
L+AC++L + + Q+H + K G+ +++ ++L + Y+ G A +F+ +P D+
Sbjct: 122 LKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDD 181
Query: 184 VLWTSMIDGYVKNGNFEKALIAYKKMVTDN------------------------------ 213
V W S+I GYVK G + AL ++KM N
Sbjct: 182 VSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNS 241
Query: 214 -VFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSA 272
V D L + LSAC L A GK +H+ + K ++ +G L D+Y+K G+M A
Sbjct: 242 DVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEA 301
Query: 273 SNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACAN 332
VF++ +++ ++TA++ GY +A++ F++++ GI+PN TF++++ AC+
Sbjct: 302 LEVFKNIKK-KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSY 360
Query: 333 QAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFDHSIQLFDEIE-NPNDTAW 389
+E G L+ + + +++ P + +VD+ G+ GL D + + E+ PN W
Sbjct: 361 TGLVEEGKLIFYSMER-DYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIW 419
Query: 390 NTLV 393
L+
Sbjct: 420 GALL 423
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 129/271 (47%), Gaps = 36/271 (13%)
Query: 4 RNLFRFRHKLCDSK-----AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLL 58
R+L ++ LC S L++ C+ + Q+HAQ+ + G + N L+
Sbjct: 98 RSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLI 157
Query: 59 NLYS-------------------------------KCGELDYAIKLFDRMSKRNMVSWTA 87
N Y+ K G++D A+ LF +M+++N +SWT
Sbjct: 158 NSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTT 217
Query: 88 MITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSG 147
MI+G+ ++ +EAL F +M+ +L++ L ACA LG+++ G +H + K+
Sbjct: 218 MISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTR 277
Query: 148 FGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYK 207
+ LG L DMY+KCGE+ +A +VF+ + K WT++I GY +G+ +A+ +
Sbjct: 278 IRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFM 337
Query: 208 KMVTDNVFIDQHVLCSTLSACTALKAFSFGK 238
+M + + + L+AC+ GK
Sbjct: 338 EMQKMGIKPNVITFTAVLTACSYTGLVEEGK 368
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/571 (36%), Positives = 320/571 (56%), Gaps = 36/571 (6%)
Query: 154 LGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDN 213
L L Y+ G++ + +F + D L+T+ I+ NG ++A + Y ++++
Sbjct: 66 LNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSE 125
Query: 214 VFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSAS 273
+ ++ S L +C+ GK +H ++KFG + ++ L D+Y+K GD+VSA
Sbjct: 126 INPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQ 181
Query: 274 NVFQS-----------------------------DSGC-RNIVSFTAIVDGYVEMDQLEK 303
VF DS C R+IVS+ ++DGY +
Sbjct: 182 KVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPND 241
Query: 304 ALNAFIDLRNSG-IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALV 362
AL F L G +P+E T + + AC+ LE G +H V + V + L+
Sbjct: 242 ALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLI 301
Query: 363 DMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVD-RGLKPNA 421
DMY KCG + ++ +F++ + AWN ++ +A HG ++A+ FNEM GL+P
Sbjct: 302 DMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTD 361
Query: 422 VTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFIN 481
+TF+ L+ C+HAG+V +G+ F SM + YG+ P+ EHY C++ LLGRAG+LK + I
Sbjct: 362 ITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIK 421
Query: 482 SMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWED 541
+M + + W S LG+CK HGD K A L+ L +NSG +VLLSNIYA +E
Sbjct: 422 NMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEG 481
Query: 542 VRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGY 601
V +R ++++ + K PG S ++I N+ H F D H + KEIY L + ++IK GY
Sbjct: 482 VAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGY 541
Query: 602 VPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKY 661
VP T +VL ++++T KE+ L HSER+A+AY L+ + G P+ + KNLRVCSDCH+ K
Sbjct: 542 VPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKL 601
Query: 662 ISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
ISK+T R I++RD +RFHHF++GSCSCGD+W
Sbjct: 602 ISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 204/446 (45%), Gaps = 63/446 (14%)
Query: 10 RHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCL-----PCTFLTNHLLNLYSKC 64
R +L + +A LI E+ Q+HA ++R L P L H Y+
Sbjct: 23 RFRLPPPEKLAVLIDKSQSVDEV---LQIHAAILRHNLLLHPRYPVLNLKLH--RAYASH 77
Query: 65 GELDYAIKLFDRMSKRNMVSWTAMI-TGFFRSLRFREALDTFCQMRAEGETASQFALSSV 123
G++ +++ LF + ++ +TA I T L+ +A + Q+ + ++F SS+
Sbjct: 78 GKIRHSLALFHQTIDPDLFLFTAAINTASINGLK-DQAFLLYVQLLSSEINPNEFTFSSL 136
Query: 124 LQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDE 183
L++C S + G +H V+K G G + ++ + L D+Y+K G+V A KVF+ MP +
Sbjct: 137 LKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSL 192
Query: 184 VLWTSMIDGYVKNGNFEKALIAYKKM-----VTDNVFID---QH---------------- 219
V T+MI Y K GN E A + M V+ NV ID QH
Sbjct: 193 VSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE 252
Query: 220 --------VLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVS 271
+ + LSAC+ + A G+ +H + + L D+YSK G +
Sbjct: 253 GKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEE 312
Query: 272 ASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN-SGIEPNEFTFSSLIKAC 330
A VF +D+ ++IV++ A++ GY + AL F +++ +G++P + TF ++AC
Sbjct: 313 AVLVF-NDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQAC 371
Query: 331 ANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFDHSIQLFDEIENPNDTA 388
A+ + G + + + + P + LV + G+ G + ++ I+N N A
Sbjct: 372 AHAGLVNEGIRIFESMGQ-EYGIKPKIEHYGCLVSLLGRAGQLKRA---YETIKNMNMDA 427
Query: 389 ----WNTLVGVFAQHG---LGRNAIE 407
W++++G HG LG+ E
Sbjct: 428 DSVLWSSVLGSCKLHGDFVLGKEIAE 453
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/602 (32%), Positives = 337/602 (55%), Gaps = 8/602 (1%)
Query: 97 RFREALDTF--CQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFL 154
RFREA + F ++R + ++++AC L SI+ +V+ ++ +GF E ++
Sbjct: 102 RFREAFELFEILEIRCSFKVGVS-TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYM 160
Query: 155 GSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNV 214
+ + M+ KCG + DA ++F+E+P ++ + S+I G+V GN+ +A +K M +
Sbjct: 161 MNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELS 220
Query: 215 FIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASN 274
+ H L A L + GK LH +K G TF+ L D+YSK GD+ A
Sbjct: 221 DCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARC 280
Query: 275 VFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQA 334
F+ + V++ ++ GY E+AL D+R+SG+ ++FT S +I+ A
Sbjct: 281 AFECMPE-KTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLA 339
Query: 335 KLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVG 394
KLE H +++ F+ + ++ALVD Y K G D + +FD++ N +WN L+G
Sbjct: 340 KLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMG 399
Query: 395 VFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVM 454
+A HG G +A++ F +M+ + PN VTF+ +L C+++G+ E G F SM +++G+
Sbjct: 400 GYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIK 459
Query: 455 PREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYK 514
PR HY C+I+LLGR G L E FI P + T W + L AC+ + E ++ A K
Sbjct: 460 PRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEK 519
Query: 515 LMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGV 574
L + PE G +V++ N+Y + + + + + + +P +WV++G++TH F
Sbjct: 520 LYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLS 579
Query: 575 ED----WSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAV 630
D ++ K++IY+K+D L+++I GY + + +L ++D+ +E++ HSE++A+
Sbjct: 580 GDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAI 639
Query: 631 AYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGD 690
AY L+ +P P+ + +N R+C +CH ++IS VT R ++VRD SRFHHF G CSCG
Sbjct: 640 AYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGG 699
Query: 691 YW 692
YW
Sbjct: 700 YW 701
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 177/361 (49%), Gaps = 14/361 (3%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
L++ C + K + K+++ ++ G P ++ N +L ++ KCG + A +LFD + +RN
Sbjct: 129 LVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERN 188
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
+ S+ ++I+GF + EA + F M E + +L+A A LGSI G Q+H
Sbjct: 189 LYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHV 248
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
+K G F+ L DMYSKCG++ DA FE MP K V W ++I GY +G E+
Sbjct: 249 CALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEE 308
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
AL M V IDQ L + T L K HA +++ GFE E AL D
Sbjct: 309 ALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVD 368
Query: 262 LYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEF 321
YSK G + +A VF +NI+S+ A++ GY + A+ F + + + PN
Sbjct: 369 FYSKWGRVDTARYVFDKLPR-KNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHV 427
Query: 322 TFSSLIKACANQAKLEHG-------SLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
TF +++ ACA E G S +HG + ++++ G+ GL D +
Sbjct: 428 TFLAVLSACAYSGLSEQGWEIFLSMSEVHG------IKPRAMHYACMIELLGRDGLLDEA 481
Query: 375 I 375
I
Sbjct: 482 I 482
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 115/216 (53%)
Query: 14 CDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKL 73
C++ A +++ A + GKQLH ++ G + TF++ L+++YSKCG+++ A
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 74 FDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSI 133
F+ M ++ V+W +I G+ EAL MR G + QF LS +++ L +
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKL 341
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
+ Q H ++++GF E+ + L D YSK G V A VF+++P K+ + W +++ GY
Sbjct: 342 ELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGY 401
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACT 229
+G A+ ++KM+ NV + + LSAC
Sbjct: 402 ANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACA 437
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 2/197 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D ++ +I+ + +L KQ HA LIR G L++ YSK G +D A +F
Sbjct: 324 DQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVF 383
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
D++ ++N++SW A++ G+ R +A+ F +M A + +VL ACA G +
Sbjct: 384 DKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSE 443
Query: 135 FGVQVHCLVVK-SGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEV-LWTSMIDG 192
G ++ + + G + + ++ + G + +A P K V +W ++++
Sbjct: 444 QGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNA 503
Query: 193 YVKNGNFEKALIAYKKM 209
N E + +K+
Sbjct: 504 CRMQENLELGRVVAEKL 520
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/615 (33%), Positives = 335/615 (54%), Gaps = 21/615 (3%)
Query: 20 AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK 79
A ++++CA EL G QLHA ++ + L++Y+KC + A LFD
Sbjct: 285 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 344
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQV 139
N S+ AMITG+ + +AL F ++ + G + +LS V +ACA + + G+Q+
Sbjct: 345 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQI 404
Query: 140 HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNF 199
+ L +KS ++ + + DMY KC +++A +VF+EM +D V W ++I + +NG
Sbjct: 405 YGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKG 464
Query: 200 EKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNAL 259
+ L + M+ + D+ S L ACT + +G +H+ IVK G + +G +L
Sbjct: 465 YETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSL 523
Query: 260 TDLYSKSGDMVSA----SNVFQSDSGCRNI---------------VSFTAIVDGYVEMDQ 300
D+YSK G + A S FQ + + VS+ +I+ GYV +Q
Sbjct: 524 IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 583
Query: 301 LEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSA 360
E A F + GI P++FT+++++ CAN A G +H QV+K D ++ S
Sbjct: 584 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICST 643
Query: 361 LVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPN 420
LVDMY KCG S +F++ + WN ++ +A HG G AI+ F M+ +KPN
Sbjct: 644 LVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPN 703
Query: 421 AVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFI 480
VTF+++L+ C+H G+++ GL YFY M + YG+ P+ HY+ ++D+LG++GK+K + I
Sbjct: 704 HVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELI 763
Query: 481 NSMPFEPTAFGWCSFLGACKTHGDK-ERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQW 539
MPFE W + LG C H + E A+ A L++L+P++S A+ LLSN+YA W
Sbjct: 764 REMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMW 823
Query: 540 EDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIV 599
E V LR+ +R +KK PG SWV++ +E HVF V D +HPR +EIYE+L + ++K
Sbjct: 824 EKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPF 883
Query: 600 GYVPQTESVLIEMDD 614
V +E +D
Sbjct: 884 DDSSFVRGVEVEEED 898
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 139/488 (28%), Positives = 236/488 (48%), Gaps = 36/488 (7%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLL----------------------- 58
+ + CA+ L GKQ HA +I G P TF+ N LL
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 59 --------NLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRA 110
N YSK ++ A F+ M R++VSW +M++G+ ++ ++++ F M
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 111 EGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSD 170
EG + +L+ C+ L G+Q+H +VV+ G ++ S L DMY+K +
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233
Query: 171 ACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTA 230
+ +VF+ +P K+ V W+++I G V+N AL +K+M N + Q + S L +C A
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293
Query: 231 LKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTA 290
L G LHA +K F + + A D+Y+K +M A +F + N S+ A
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL-NRQSYNA 352
Query: 291 IVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFN 350
++ GY + + KAL F L +SG+ +E + S + +ACA L G ++G +K +
Sbjct: 353 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 351 FDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFN 410
D V++A +DMYGKC + ++FDE+ + +WN ++ Q+G G + F
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 472
Query: 411 EMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNC-IIDLLGR 469
M+ ++P+ TF ++LK C+ G + G+ S+ K M C +ID+ +
Sbjct: 473 SMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVK--SGMASNSSVGCSLIDMYSK 529
Query: 470 AGKLKEVE 477
G ++E E
Sbjct: 530 CGMIEEAE 537
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/535 (25%), Positives = 258/535 (48%), Gaps = 45/535 (8%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + A +++ C+ ++ S G Q+H ++R GC + LL++Y+K ++++F
Sbjct: 179 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 238
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ ++N VSW+A+I G ++ AL F +M+ SQ +SVL++CA+L ++
Sbjct: 239 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR 298
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G Q+H +KS F + + + DMY+KC + DA +F+ + + +MI GY
Sbjct: 299 LGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYS 358
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+ + KAL+ + ++++ + D+ L AC +K S G ++ + +K +
Sbjct: 359 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC 418
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+ NA D+Y K + A VF + R+ VS+ AI+ + + + + L F+ + S
Sbjct: 419 VANAAIDMYGKCQALAEAFRVFD-EMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 477
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
IEP+EFTF S++KAC L +G +H +VK + V +L+DMY KCG+ + +
Sbjct: 478 RIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Query: 375 IQL-------------FDEIENPND-------TAWNTLVGVFAQHGLGRNAIETFNEMVD 414
++ +E+E ++ +WN+++ + +A F M++
Sbjct: 537 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 596
Query: 415 RGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEH----YNC--IIDLLG 468
G+ P+ T+ +L C A + GL +I+ + ++E Y C ++D+
Sbjct: 597 MGITPDKFTYATVLDTC--ANLASAGLG-----KQIHAQVIKKELQSDVYICSTLVDMYS 649
Query: 469 RAGKLKEVEDFINSMPFEPTA----FGWCSFLGACKTHGDKERAKLAAYKLMKLE 519
+ G L + + + FE + W + + HG E A + ++ M LE
Sbjct: 650 KCGDLHD-----SRLMFEKSLRRDFVTWNAMICGYAHHGKGEEA-IQLFERMILE 698
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 211/461 (45%), Gaps = 47/461 (10%)
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQV 139
R++VS+ +T S R + F + + S S V + CA G+++ G Q
Sbjct: 12 RSVVSFNRCLTEKI-SYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQA 70
Query: 140 HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNF 199
H ++ SGF F+ + L +Y+ + A VF++MP +D V W MI+GY K+ +
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDM 130
Query: 200 EKA-----------LIAYKKMVTD-----------NVFIDQ---------HVLCSTLSAC 228
KA ++++ M++ VF+D L C
Sbjct: 131 FKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVC 190
Query: 229 TALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSF 288
+ L+ S G +H I+V+ G + + +AL D+Y+K V + VFQ +N VS+
Sbjct: 191 SFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE-KNSVSW 249
Query: 289 TAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVK 348
+AI+ G V+ + L AL F +++ ++ ++S++++CA ++L G LH +K
Sbjct: 250 SAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALK 309
Query: 349 FNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIET 408
+F D V +A +DMY KC + LFD EN N ++N ++ ++Q G A+
Sbjct: 310 SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLL 369
Query: 409 FNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEH------YNC 462
F+ ++ GL + ++ + + C+ + +GL +IYG+ + N
Sbjct: 370 FHRLMSSGLGFDEISLSGVFRACALVKGLSEGL-------QIYGLAIKSSLSLDVCVANA 422
Query: 463 IIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHG 503
ID+ G+ L E + M A W + + A + +G
Sbjct: 423 AIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNG 462
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D A ++ TCA GKQ+HAQ+I+ ++ + L+++YSKCG+L + +F
Sbjct: 602 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF 661
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
++ +R+ V+W AMI G+ + EA+ F +M E + S+L+ACA +G I
Sbjct: 662 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID 721
Query: 135 FGVQVHCLVVKS-GFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMI 190
G++ ++ + G +L SN+ D+ K G+V A ++ EMP + D+V+W +++
Sbjct: 722 KGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 779
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/561 (34%), Positives = 328/561 (58%), Gaps = 5/561 (0%)
Query: 52 FLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAE 111
L +L+ Y + G ++ A LFD M R++V+WTAMITG+ S A + F +M +
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 112 GETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCG-EVSD 170
G + ++F LSSVL++C ++ + +G VH +VVK G L++ + + +MY+ C +
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 171 ACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTA 230
AC +F ++ K++V WT++I G+ G+ L YK+M+ +N + + + + A +
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 231 LKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTA 290
+ + + GK +HA ++K GF+ + N++ DLY + G + A + F ++++++
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMED-KDLITWNT 284
Query: 291 IVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFN 350
++ D E AL F + G PN +TF+SL+ ACAN A L G LHG++ +
Sbjct: 285 LISELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG 343
Query: 351 FDRDPFVSSALVDMYGKCGLFDHSIQLFDEI-ENPNDTAWNTLVGVFAQHGLGRNAIETF 409
F+++ +++AL+DMY KCG S ++F EI + N +W +++ + HG G A+E F
Sbjct: 344 FNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELF 403
Query: 410 NEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGR 469
++MV G++P+ + F+ +L C HAG+VE GL YF M+ YG+ P + YNC++DLLGR
Sbjct: 404 DKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 470 AGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKER-AKLAAYKLMKLEPENSGAHVL 528
AGK+ E + + MPF+P W + LGACK H ++LAA K+M+L+P+ G +V+
Sbjct: 464 AGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVM 523
Query: 529 LSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEK 588
LS IYA E +W D +RKM+R KK G SW+ + N+ F V D P +Y
Sbjct: 524 LSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSV 583
Query: 589 LDSLLDQIKIVGYVPQTESVL 609
L L+++ + GYVP+ +S++
Sbjct: 584 LGLLIEETREAGYVPELDSLV 604
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 204/387 (52%), Gaps = 10/387 (2%)
Query: 19 VAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCG-ELDYAIKLFDRM 77
++ ++++C K L+ G +H +++ G ++ N ++N+Y+ C ++ A +F +
Sbjct: 114 LSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDI 173
Query: 78 SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
+N V+WT +ITGF L + QM E + + ++ ++A AS+ S+ G
Sbjct: 174 KVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGK 233
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNG 197
Q+H V+K GF L + +++ D+Y +CG +S+A F EM KD + W ++I ++
Sbjct: 234 QIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD 293
Query: 198 NFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGN 257
+ E AL+ +++ + + + S ++AC + A + G+ LH I + GF + N
Sbjct: 294 SSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELAN 352
Query: 258 ALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIE 317
AL D+Y+K G++ + VF RN+VS+T+++ GY +A+ F + +SGI
Sbjct: 353 ALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIR 412
Query: 318 PNEFTFSSLIKACANQAKLEHGSLLHGQVVK----FNFDRDPFVSSALVDMYGKCGLFDH 373
P+ F +++ AC + +E G L + V++ N DRD + + +VD+ G+ G
Sbjct: 413 PDRIVFMAVLSACRHAGLVEKG-LKYFNVMESEYGINPDRD--IYNCVVDLLGRAGKIGE 469
Query: 374 SIQLFDEIE-NPNDTAWNTLVGVFAQH 399
+ +L + + P+++ W ++G H
Sbjct: 470 AYELVERMPFKPDESTWGAILGACKAH 496
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 109/212 (51%), Gaps = 7/212 (3%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM-SKR 80
L+ CA L+ G+QLH ++ R G L N L+++Y+KCG + + ++F + +R
Sbjct: 319 LVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRR 378
Query: 81 NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ-V 139
N+VSWT+M+ G+ EA++ F +M + G + +VL AC G ++ G++
Sbjct: 379 NLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYF 438
Query: 140 HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMI---DGYVK 195
+ + + G + + + + D+ + G++ +A ++ E MP K DE W +++ +
Sbjct: 439 NVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKH 498
Query: 196 NGNFEKALIAYKKMVTDNVFIDQHVLCSTLSA 227
NG + L A K M + +V+ S + A
Sbjct: 499 NGLISR-LAARKVMELKPKMVGTYVMLSYIYA 529
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/576 (32%), Positives = 325/576 (56%), Gaps = 1/576 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ ++ +++ C Q+ ++ G+ LHA ++ L ++ + LL++Y + G++D + ++F
Sbjct: 107 DTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVF 166
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
M RN V+WTA+ITG + R++E L F +M E + + + L+ACA L ++
Sbjct: 167 SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVK 226
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
+G +H V+ GF L + ++L MY++CGE+ D +FE M +D V WTS+I Y
Sbjct: 227 YGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYK 286
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+ G KA+ + KM V ++ S SAC +L +G+ LH ++ G
Sbjct: 287 RIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLS 346
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+ N++ +YS G++VSAS +FQ CR+I+S++ I+ GY + E+ F +R S
Sbjct: 347 VSNSMMKMYSTCGNLVSASVLFQGMR-CRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQS 405
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
G +P +F +SL+ N A +E G +H + F +++ V S+L++MY KCG +
Sbjct: 406 GTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Query: 375 IQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHA 434
+F E + + + ++ +A+HG + AI+ F + + G +P++VTF+++L C+H+
Sbjct: 466 SMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHS 525
Query: 435 GMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCS 494
G ++ G +YF M + Y + P +EHY C++DLL RAG+L + E IN M ++ W +
Sbjct: 526 GQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTT 585
Query: 495 FLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNM 554
L ACK GD ER + AA ++++L+P + A V L+NIY+ E+ +RK ++ +
Sbjct: 586 LLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGV 645
Query: 555 KKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLD 590
K PG+S + I + F D HP+ ++IY L+
Sbjct: 646 IKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 223/423 (52%), Gaps = 5/423 (1%)
Query: 55 NHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET 114
+HL +L + G L A ++FD+M ++VSWT++I + + EAL F MR
Sbjct: 45 SHLRSLIN-AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 115 AS--QFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDAC 172
S LS VL+AC +I +G +H VK+ +++GS+L DMY + G++ +C
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 173 KVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALK 232
+VF EMP ++ V WT++I G V G +++ L + +M D + L AC L+
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 233 AFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIV 292
+GK++H ++ GF + N+L +Y++ G+M +F++ S R++VS+T+++
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSE-RDVVSWTSLI 282
Query: 293 DGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFD 352
Y + Q KA+ FI +RNS + PNE TF+S+ ACA+ ++L G LH V+ +
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN 342
Query: 353 RDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEM 412
VS++++ MY CG + LF + + +W+T++G + Q G G + F+ M
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM 402
Query: 413 VDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGK 472
G KP +LL + ++E G +++ +G+ + +I++ + G
Sbjct: 403 RQSGTKPTDFALASLLSVSGNMAVIEGG-RQVHALALCFGLEQNSTVRSSLINMYSKCGS 461
Query: 473 LKE 475
+KE
Sbjct: 462 IKE 464
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 243/485 (50%), Gaps = 25/485 (5%)
Query: 11 HKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYA 70
+L D+ A ++ CA +++ GK +H +I G + + N L +Y++CGE+
Sbjct: 204 EELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDG 263
Query: 71 IKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
+ LF+ MS+R++VSWT++I + R + +A++TF +MR ++ +S+ ACASL
Sbjct: 264 LCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASL 323
Query: 131 GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMI 190
+ +G Q+HC V+ G L + +++ MYS CG + A +F+ M C+D + W+++I
Sbjct: 324 SRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTII 383
Query: 191 DGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFE 250
GY + G E+ + M L S LS + G+ +HA+ + FG E
Sbjct: 384 GGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLE 443
Query: 251 YETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID 310
+ + ++L ++YSK G + AS +F ++ +IVS TA+++GY E + ++A++ F
Sbjct: 444 QNSTVRSSLINMYSKCGSIKEASMIF-GETDRDDIVSLTAMINGYAEHGKSKEAIDLFEK 502
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKC 368
G P+ TF S++ AC + +L+ G + +++ ++ P +VD+ +
Sbjct: 503 SLKVGFRPDSVTFISVLTACTHSGQLDLG-FHYFNMMQETYNMRPAKEHYGCMVDLLCRA 561
Query: 369 GLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHG---LGRNAIETFNEMVDRGLKPN-AVT 423
G + ++ +E+ +D W TL+ G GR A E E L P A
Sbjct: 562 GRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILE-----LDPTCATA 616
Query: 424 FVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKE-VEDFINS 482
V L S G +E+ N +M K GV+ +E ++ I K+K+ V F++
Sbjct: 617 LVTLANIYSSTGNLEEAANVRKNM-KAKGVI-KEPGWSSI--------KIKDCVSAFVSG 666
Query: 483 MPFEP 487
F P
Sbjct: 667 DRFHP 671
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 5/245 (2%)
Query: 266 SGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR--NSGIEPNEFTF 323
+G++ +A VF +IVS+T+I+ YV + ++AL F +R + + P+
Sbjct: 53 AGNLRAARQVFDKMPH-GDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVL 111
Query: 324 SSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN 383
S ++KAC + + +G LH VK + +V S+L+DMY + G D S ++F E+
Sbjct: 112 SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 384 PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNY 443
N W ++ G + + F+EM + TF LK C+ V+ G
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYG-KA 230
Query: 444 FYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHG 503
++ + G + N + + G++++ +M E W S + A K G
Sbjct: 231 IHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLIVAYKRIG 289
Query: 504 DKERA 508
+ +A
Sbjct: 290 QEVKA 294
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/579 (35%), Positives = 325/579 (56%), Gaps = 6/579 (1%)
Query: 119 ALSSVLQACASLGSIQFGVQVHCLVVKS-GFGCELFLGSNLTDMYSKCGEVSDACKVFEE 177
A + +L AC S S+ G+++ L++ + L S L ++S C + A K+F++
Sbjct: 133 AYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDD 192
Query: 178 MPCKD---EVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAF 234
+ E +W +M GY +NG+ ALI Y M+ + + L AC LK
Sbjct: 193 VTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDL 252
Query: 235 SFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDG 294
G+ +HA IVK + + + N L LY +SG A VF S RN+V++ +++
Sbjct: 253 RVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSE-RNVVTWNSLISV 311
Query: 295 YVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRD 354
+ ++ + N F ++ I + T ++++ AC+ A L G +H Q++K D
Sbjct: 312 LSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPD 371
Query: 355 PFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVD 414
+ ++L+DMYGKCG ++S ++FD + + +WN ++ +A +G I F M++
Sbjct: 372 VPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE 431
Query: 415 RGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLK 474
G+ P+ +TFV LL GCS G+ E GL+ F M + V P EHY C++D+LGRAGK+K
Sbjct: 432 SGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIK 491
Query: 475 EVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYA 534
E I +MPF+P+A W S L +C+ HG+ ++AA +L LEP N G +V++SNIYA
Sbjct: 492 EAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYA 551
Query: 535 KERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKL-DSLL 593
+ W++V +R+M++ +KK G SWV + ++ +F R + Y+K+ L
Sbjct: 552 DAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQ 611
Query: 594 DQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCS 653
+ I+ GY P T VL ++D+ K + HSER+A YSL+ + G PI + KNLRVC+
Sbjct: 612 EAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCA 671
Query: 654 DCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
DCHS K +S+VT R I++RD RFHHF +G CSC DYW
Sbjct: 672 DCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 190/391 (48%), Gaps = 9/391 (2%)
Query: 17 KAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTF-LTNHLLNLYSKCGELDYAIKLFD 75
+A L+ C AK L G ++ + ++ L L + L+ L+S C LD A K+FD
Sbjct: 132 EAYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFD 191
Query: 76 RMSKRNMVS---WTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGS 132
++ ++++ W AM G+ R+ R+AL + M F++S L+AC L
Sbjct: 192 DVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKD 251
Query: 133 IQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDG 192
++ G +H +VK + + + L +Y + G DA KVF+ M ++ V W S+I
Sbjct: 252 LRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISV 311
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
K + ++KM + + L + L AC+ + A GK +HA I+K + +
Sbjct: 312 LSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPD 371
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR 312
+ N+L D+Y K G++ + VF +++ S+ +++ Y +E+ +N F +
Sbjct: 372 VPLLNSLMDMYGKCGEVEYSRRVFDV-MLTKDLASWNIMLNCYAINGNIEEVINLFEWMI 430
Query: 313 NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGL 370
SG+ P+ TF +L+ C++ E+G L + +K F P + + LVD+ G+ G
Sbjct: 431 ESGVAPDGITFVALLSGCSDTGLTEYGLSLF-ERMKTEFRVSPALEHYACLVDILGRAGK 489
Query: 371 FDHSIQLFDEIE-NPNDTAWNTLVGVFAQHG 400
++++ + + P+ + W +L+ HG
Sbjct: 490 IKEAVKVIETMPFKPSASIWGSLLNSCRLHG 520
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/589 (36%), Positives = 333/589 (56%), Gaps = 9/589 (1%)
Query: 108 MRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGE 167
M A+ ++ LS +L+A +S + ++H +V+++GF + L + L + G+
Sbjct: 1 MLAKQTPLTKQMLSELLRASSS--KPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGD 58
Query: 168 VSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSA 227
+ A +VF+EM LW ++ GYV+N ++L+ YKKM V D+ + A
Sbjct: 59 MCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKA 118
Query: 228 CTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVS 287
+ L FS G +LHA +VK+GF + L +Y K G++ SA +F+S +++V+
Sbjct: 119 ISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQ-VKDLVA 177
Query: 288 FTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVV 347
+ A + V+ AL F + ++ + FT S++ AC LE G ++ +
Sbjct: 178 WNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRAR 237
Query: 348 KFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIE 407
K D + V +A +DM+ KCG + + LF+E++ N +W+T++ +A +G R A+
Sbjct: 238 KEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALT 297
Query: 408 TFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSM----DKIYGVMPREEHYNCI 463
F M + GL+PN VTF+ +L CSHAG+V +G YF M DK + PR+EHY C+
Sbjct: 298 LFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDK--NLEPRKEHYACM 355
Query: 464 IDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENS 523
+DLLGR+G L+E +FI MP EP W + LGAC H D + A L++ P+
Sbjct: 356 VDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIG 415
Query: 524 GAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKK 583
HVLLSNIYA +W+ V +R +R KK+ YS V+ + H F D SHP+ K
Sbjct: 416 SYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSK 475
Query: 584 EIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPI 643
IYEKLD +L +I+ +GYVP T SV +++ KE L +HSE++A+A+ L+ G PI
Sbjct: 476 AIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPI 535
Query: 644 IVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
V KNLR C DCH+ K++S +T II+RD +RFHHF NG CSC ++W
Sbjct: 536 RVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 182/377 (48%), Gaps = 5/377 (1%)
Query: 27 AQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWT 86
A + + + K++HA ++R G L LL G++ YA ++FD M K + W
Sbjct: 19 ASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWN 78
Query: 87 AMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKS 146
+ G+ R+ E+L + +MR G +F V++A + LG G +H VVK
Sbjct: 79 TLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKY 138
Query: 147 GFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAY 206
GFGC + + L MY K GE+S A +FE M KD V W + + V+ GN AL +
Sbjct: 139 GFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYF 198
Query: 207 KKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKS 266
KM D V D + S LSAC L + G+ ++ K + + NA D++ K
Sbjct: 199 NKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKC 258
Query: 267 GDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSL 326
G+ +A +F+ + RN+VS++ ++ GY +AL F ++N G+ PN TF +
Sbjct: 259 GNTEAARVLFE-EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGV 317
Query: 327 IKACANQAKLEHGSLLHGQVVKF---NFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN 383
+ AC++ + G +V+ N + + +VD+ G+ GL + + + ++
Sbjct: 318 LSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPV 377
Query: 384 PNDTA-WNTLVGVFAQH 399
DT W L+G A H
Sbjct: 378 EPDTGIWGALLGACAVH 394
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 114/225 (50%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
+++ +Q + S G LHA +++ G + L+ +Y K GEL A LF+ M ++
Sbjct: 115 VVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKD 174
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
+V+W A + ++ AL+ F +M A+ F + S+L AC LGS++ G +++
Sbjct: 175 LVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYD 234
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
K C + + + DM+ KCG A +FEEM ++ V W++MI GY NG+ +
Sbjct: 235 RARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSRE 294
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVK 246
AL + M + + + LSAC+ + GK +++V+
Sbjct: 295 ALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQ 339
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/584 (33%), Positives = 328/584 (56%), Gaps = 3/584 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D A +I+ CA + ++ GKQLHAQ+I+ N L+ +Y + ++ A ++F
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVF 226
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFR-EALDTFCQMRAEGE-TASQFALSSVLQACASLGS 132
+ ++++SW+++I GF L F EAL +M + G +++ S L+AC+SL
Sbjct: 227 YGIPMKDLISWSSIIAGF-SQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLR 285
Query: 133 IQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDG 192
+G Q+H L +KS G +L DMY++CG ++ A +VF+++ D W +I G
Sbjct: 286 PDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAG 345
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
NG ++A+ + +M + D L S L A T A S G +H+ I+K+GF +
Sbjct: 346 LANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLAD 405
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR 312
+ N+L +Y+ D+ N+F+ + VS+ I+ ++ +Q + L F +
Sbjct: 406 LTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLML 465
Query: 313 NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
S EP+ T +L++ C + L+ GS +H +K + F+ + L+DMY KCG
Sbjct: 466 VSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLG 525
Query: 373 HSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
+ ++FD ++N + +W+TL+ +AQ G G A+ F EM G++PN VTFV +L CS
Sbjct: 526 QARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACS 585
Query: 433 HAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGW 492
H G+VE+GL + +M +G+ P +EH +C++DLL RAG+L E E FI+ M EP W
Sbjct: 586 HVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVW 645
Query: 493 CSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDG 552
+ L ACKT G+ A+ AA ++K++P NS AHVLL +++A WE+ LR ++
Sbjct: 646 KTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKH 705
Query: 553 NMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQI 596
++KK+PG SW++I ++ H+F ED HP + +IY L ++ Q+
Sbjct: 706 DVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/507 (29%), Positives = 260/507 (51%), Gaps = 11/507 (2%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
LI C+ ++ L++G+++H ++ C T L NH+L++Y KCG L A ++FD M +RN
Sbjct: 73 LICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERN 132
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
+VS+T++ITG+ ++ + EA+ + +M E QFA S+++ACAS + G Q+H
Sbjct: 133 LVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHA 192
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
V+K L + L MY + ++SDA +VF +P KD + W+S+I G+ + G +
Sbjct: 193 QVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFE 252
Query: 202 ALIAYKKMVTDNVF-IDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALT 260
AL K+M++ VF ++++ S+L AC++L +G +H + +K G +L
Sbjct: 253 ALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLC 312
Query: 261 DLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNE 320
D+Y++ G + SA VF + S+ I+ G ++A++ F +R+SG P+
Sbjct: 313 DMYARCGFLNSARRVFDQIER-PDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDA 371
Query: 321 FTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDE 380
+ SL+ A L G +H ++K+ F D V ++L+ MY C LF++
Sbjct: 372 ISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFED 431
Query: 381 IENPNDT-AWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVED 439
N D+ +WNT++ QH + F M+ +P+ +T NLL+GC ++
Sbjct: 432 FRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKL 491
Query: 440 GLN-YFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGA 498
G + YS+ G+ P + N +ID+ + G L + +SM W + +
Sbjct: 492 GSQVHCYSLKT--GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD-NRDVVSWSTLIVG 548
Query: 499 CKTHGDKERAKLAAYKLMK---LEPEN 522
G E A L +K MK +EP +
Sbjct: 549 YAQSGFGEEA-LILFKEMKSAGIEPNH 574
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 257/534 (48%), Gaps = 43/534 (8%)
Query: 89 ITGFFRSLRFREALDTFCQMRAEGETASQFALS---SVLQACASLGSIQFGVQVHCLVVK 145
I +S +REAL+ F A+ ++ + L S++ AC+S S+ G ++H ++
Sbjct: 38 INSLCKSNFYREALEAF--DFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILN 95
Query: 146 SGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIA 205
S + L +++ MY KCG + DA +VF+ MP ++ V +TS+I GY +NG +A+
Sbjct: 96 SNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRL 155
Query: 206 YKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSK 265
Y KM+ +++ DQ S + AC + GK LHA ++K NAL +Y +
Sbjct: 156 YLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR 215
Query: 266 SGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI-EPNEFTFS 324
M AS VF ++++S+++I+ G+ ++ +AL+ ++ + G+ PNE+ F
Sbjct: 216 FNQMSDASRVFYGIP-MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 325 SLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENP 384
S +KAC++ + ++GS +HG +K + +L DMY +CG + + ++FD+IE P
Sbjct: 275 SSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP 334
Query: 385 NDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYF 444
+ +WN ++ A +G A+ F++M G P+A++ +LL + + G+
Sbjct: 335 DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIH 394
Query: 445 YSMDKIYGVMPREEHYNCIIDLLGRAGKL----KEVEDFINSMPFEPTAFGWCSFLGACK 500
+ K +G + N ++ + L EDF N+ + W + L AC
Sbjct: 395 SYIIK-WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNN----ADSVSWNTILTACL 449
Query: 501 THGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGY 560
H ++ L +KLM L E H+ + N+ LR + ++K
Sbjct: 450 QH-EQPVEMLRLFKLM-LVSECEPDHITMGNL------------LRGCVEISSLK----- 490
Query: 561 SWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDD 614
+G++ H + ++ P E + K + L+D G + Q + MD+
Sbjct: 491 ----LGSQVHCYSLKTGLAP---EQFIK-NGLIDMYAKCGSLGQARRIFDSMDN 536
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/515 (36%), Positives = 301/515 (58%), Gaps = 4/515 (0%)
Query: 179 PCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGK 238
PC + + +MI GYV +FE+AL Y +M+ D L ACT LK+ GK
Sbjct: 95 PCTFD--FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGK 152
Query: 239 SLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEM 298
+H + K G E + F+ N+L ++Y + G+M +S VF+ + S++++V M
Sbjct: 153 QIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLES-KTAASWSSMVSARAGM 211
Query: 299 DQLEKALNAFIDL-RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFV 357
+ L F + + ++ E S + ACAN L G +HG +++ + + V
Sbjct: 212 GMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIV 271
Query: 358 SSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGL 417
++LVDMY KCG D ++ +F ++E N+ ++ ++ A HG G +A+ F++M+ GL
Sbjct: 272 QTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGL 331
Query: 418 KPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVE 477
+P+ V +V++L CSH+G+V++G F M K V P EHY C++DLLGRAG L+E
Sbjct: 332 EPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEAL 391
Query: 478 DFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKER 537
+ I S+P E W +FL C+ + E ++AA +L+KL N G ++L+SN+Y++ +
Sbjct: 392 ETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQ 451
Query: 538 QWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIK 597
W+DV R I +K+ PG+S V++ +TH F +D SHP+ KEIY+ L + Q+K
Sbjct: 452 MWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLK 511
Query: 598 IVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHS 657
GY P +L+ +D+ K++ L HS+++A+A+ LL +P G I + +NLR+CSDCH+
Sbjct: 512 FEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHT 571
Query: 658 AFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
K IS + ER I+VRD +RFH F G+CSC DYW
Sbjct: 572 YTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 184/382 (48%), Gaps = 17/382 (4%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGE------LDYAIKLFD 75
L++ C E KQ+HA+ I+ + ++ +KC ++YA +F
Sbjct: 36 LLKRCHNIDEF---KQVHARFIKL--SLFYSSSFSASSVLAKCAHSGWENSMNYAASIFR 90
Query: 76 RMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQF 135
+ + MI G+ + F EAL + +M G F +L+AC L SI+
Sbjct: 91 GIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIRE 150
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVK 195
G Q+H V K G ++F+ ++L +MY +CGE+ + VFE++ K W+SM+
Sbjct: 151 GKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAG 210
Query: 196 NGNFEKALIAYKKMVTD-NVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
G + + L+ ++ M ++ N+ ++ + S L AC A + G S+H +++ E
Sbjct: 211 MGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNII 270
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+ +L D+Y K G + A ++FQ RN ++++A++ G + E AL F +
Sbjct: 271 VQTSLVDMYVKCGCLDKALHIFQKMEK-RNNLTYSAMISGLALHGEGESALRMFSKMIKE 329
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFD 372
G+EP+ + S++ AC++ ++ G + +++K +P LVD+ G+ GL +
Sbjct: 330 GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLK-EGKVEPTAEHYGCLVDLLGRAGLLE 388
Query: 373 HSIQLFDEIE-NPNDTAWNTLV 393
+++ I ND W T +
Sbjct: 389 EALETIQSIPIEKNDVIWRTFL 410
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/527 (34%), Positives = 304/527 (57%), Gaps = 4/527 (0%)
Query: 168 VSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSA 227
+S A +FE M D V++ SM GY + N + + +++ D + D + S L A
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 228 CTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSD-SGCRNIV 286
C KA G+ LH + +K G + ++ L ++Y++ D+ SA VF C +V
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPC--VV 196
Query: 287 SFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQV 346
+ A++ GY ++ +AL+ F +++ ++PNE T S++ +CA L+ G +H
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 347 VKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAI 406
K +F + V++AL+DM+ KCG D ++ +F+++ + AW+ ++ +A HG ++
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSM 316
Query: 407 ETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDL 466
F M ++P+ +TF+ LL CSH G VE+G YF M +G++P +HY ++DL
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
Query: 467 LGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAH 526
L RAG L++ +FI+ +P PT W L AC +H + + A+ + ++ +L+ + G +
Sbjct: 377 LSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDY 436
Query: 527 VLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIY 586
V+LSN+YA+ ++WE V LRK+++D K+PG S +++ N H F D +++
Sbjct: 437 VILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLH 496
Query: 587 EKLDSLLDQIKIVGYVPQTESVL-IEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIV 645
LD ++ ++K+ GYVP T V+ M+D KE L HSE++A+ + LL +P G I V
Sbjct: 497 RALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRV 556
Query: 646 KKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
KNLRVC DCH+A K IS + R +++RD+ RFHHF +G CSCGD+W
Sbjct: 557 VKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 144/261 (55%), Gaps = 1/261 (0%)
Query: 13 LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIK 72
L D+ L++ CA AK L +G+QLH ++ G ++ L+N+Y++C ++D A
Sbjct: 126 LPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARC 185
Query: 73 LFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGS 132
+FDR+ + +V + AMITG+ R R EAL F +M+ + ++ L SVL +CA LGS
Sbjct: 186 VFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGS 245
Query: 133 IQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDG 192
+ G +H K F + + + L DM++KCG + DA +FE+M KD W++MI
Sbjct: 246 LDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVA 305
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFG-KSLHAIIVKFGFEY 251
Y +G EK+++ +++M ++NV D+ L+AC+ G K ++ KFG
Sbjct: 306 YANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVP 365
Query: 252 ETFIGNALTDLYSKSGDMVSA 272
++ DL S++G++ A
Sbjct: 366 SIKHYGSMVDLLSRAGNLEDA 386
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 189/386 (48%), Gaps = 14/386 (3%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKC---GELDYAIKLFDRMS 78
LI C +EL Q+ A I+ +F+ L+N ++ + YA LF+ MS
Sbjct: 35 LISKCNSLREL---MQIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMS 90
Query: 79 KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ 138
+ ++V + +M G+ R E F ++ +G + S+L+ACA +++ G Q
Sbjct: 91 EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQ 150
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEM--PCKDEVLWTSMIDGYVKN 196
+HCL +K G +++ L +MY++C +V A VF+ + PC V + +MI GY +
Sbjct: 151 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCV--VCYNAMITGYARR 208
Query: 197 GNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIG 256
+AL +++M + ++ L S LS+C L + GK +H K F +
Sbjct: 209 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 268
Query: 257 NALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI 316
AL D+++K G + A ++F+ ++ +++A++ Y + EK++ F +R+ +
Sbjct: 269 TALIDMFAKCGSLDDAVSIFEK-MRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENV 327
Query: 317 EPNEFTFSSLIKACANQAKLEHGSLLHGQVV-KFNFDRDPFVSSALVDMYGKCGLFDHSI 375
+P+E TF L+ AC++ ++E G Q+V KF ++VD+ + G + +
Sbjct: 328 QPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAY 387
Query: 376 QLFDEIE-NPNDTAWNTLVGVFAQHG 400
+ D++ +P W L+ + H
Sbjct: 388 EFIDKLPISPTPMLWRILLAACSSHN 413
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/612 (33%), Positives = 332/612 (54%), Gaps = 43/612 (7%)
Query: 119 ALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSD--ACKVFE 176
+L S L C +L I+ Q+H V++ G ++ + L +K G D A +V E
Sbjct: 51 SLISKLDDCINLNQIK---QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 177 EMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSF 236
+ ++ LWT++I GY G F++A+ Y M + + + L AC +K +
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 237 GKSLHAIIVKF-GFEYETFIGNALTDLY-------------------------------S 264
G+ HA + GF + ++GN + D+Y +
Sbjct: 168 GRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYA 226
Query: 265 KSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFS 324
+ G+M A+ +F+S +++V++TA+V G+ + + ++AL F + SGI +E T +
Sbjct: 227 RVGNMECAAELFESLP-TKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVA 285
Query: 325 SLIKACAN--QAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE 382
I ACA +K ++ Q ++ + SAL+DMY KCG + ++ +F +
Sbjct: 286 GYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN 345
Query: 383 NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRG-LKPNAVTFVNLLKGCSHAGMVEDGL 441
N N +++++ A HG + A+ F+ MV + +KPN VTFV L CSH+G+V+ G
Sbjct: 346 NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGR 405
Query: 442 NYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKT 501
F SM + +GV P +HY C++DLLGR G+L+E + I +M EP W + LGAC+
Sbjct: 406 QVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRI 465
Query: 502 HGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYS 561
H + E A++AA L +LEP+ G ++LLSN+YA W V +RK+I++ +KK P S
Sbjct: 466 HNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVS 525
Query: 562 W-VDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKL 620
W VD + H F + +HP +I +KL+ L++++ ++GY P SV ++ D K +
Sbjct: 526 WVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLI 585
Query: 621 LHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHH 680
L H+E++A+A+SLL + I + KNLR+C DCH + S+VT + II+RD RFHH
Sbjct: 586 LIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHH 645
Query: 681 FSNGSCSCGDYW 692
F +G CSCGD+W
Sbjct: 646 FRSGDCSCGDFW 657
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 197/421 (46%), Gaps = 43/421 (10%)
Query: 19 VAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCG-ELD-YAIKLFDR 76
V+ LI L++ KQ+H ++R G ++ L+ +K G +D YA ++ +
Sbjct: 49 VSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEP 108
Query: 77 MSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFG 136
+ RN WTA+I G+ +F EA+ + MR E T F S++L+AC ++ + G
Sbjct: 109 VQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLG 168
Query: 137 VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKN 196
Q H + C +++G+ + DMY KC + A KVF+EMP +D + WT +I Y +
Sbjct: 169 RQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARV 228
Query: 197 GNFE-----------KALIAYKKMVT--------------------DNVFIDQHVLCSTL 225
GN E K ++A+ MVT + D+ + +
Sbjct: 229 GNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYI 288
Query: 226 SACTALKAFSFGKSLHAIIVKFGFEY--ETFIGNALTDLYSKSGDMVSASNVFQSDSGCR 283
SAC L A + I K G+ IG+AL D+YSK G++ A NVF S + +
Sbjct: 289 SACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNN-K 347
Query: 284 NIVSFTAIVDGYVEMDQLEKALNAF-IDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLL 342
N+ ++++++ G + ++AL+ F + + I+PN TF + AC++ ++ G +
Sbjct: 348 NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
Query: 343 HG---QVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQ 398
Q RD + + +VD+ G+ G +++L + P+ W L+G
Sbjct: 408 FDSMYQTFGVQPTRDHY--TCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRI 465
Query: 399 H 399
H
Sbjct: 466 H 466
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/610 (32%), Positives = 333/610 (54%), Gaps = 43/610 (7%)
Query: 122 SVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNL-------TDMYSKCGEVSDACKV 174
++LQ+C+S ++ +H ++++ ++F+ S L + + A +
Sbjct: 17 ALLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 175 FEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAF 234
F ++ + ++ +I + KA Y +M+ ++ D + A + ++
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECV 133
Query: 235 SFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIV-- 292
G+ H+ IV+FGF+ + ++ N+L +Y+ G + +A +F G R++VS+T++V
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF-GQMGFRDVVSWTSMVAG 192
Query: 293 -----------------------------DGYVEMDQLEKALNAFIDLRNSGIEPNEFTF 323
+GY + + EKA++ F ++ G+ NE
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 324 SSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN 383
S+I +CA+ LE G + VVK + + + +ALVDM+ +CG + +I +F+ +
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 384 PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNY 443
+ +W++++ A HG A+ F++M+ G P VTF +L CSH G+VE GL
Sbjct: 313 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 444 FYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHG 503
+ +M K +G+ PR EHY CI+D+LGRAGKL E E+FI M +P A + LGACK +
Sbjct: 373 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 432
Query: 504 DKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWV 563
+ E A+ L+K++PE+SG +VLLSNIYA QW+ + LR M+++ +KK PG+S +
Sbjct: 433 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLI 492
Query: 564 DIGNETHVFGV-EDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLH 622
+I + + F + +D HP +I K + +L +I+++GY T ++D+ KE +H
Sbjct: 493 EIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIH 552
Query: 623 NHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFS 682
HSE++A+AY ++ + G I + KNLRVC DCH+ K IS+V R +IVRD +RFHHF
Sbjct: 553 MHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFR 612
Query: 683 NGSCSCGDYW 692
NG CSC DYW
Sbjct: 613 NGVCSCRDYW 622
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 163/354 (46%), Gaps = 37/354 (10%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYS------------ 62
D+ LI+ ++ + + G+Q H+Q++R G ++ N L+++Y+
Sbjct: 116 DNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF 175
Query: 63 -------------------KCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALD 103
KCG ++ A ++FD M RN+ +W+ MI G+ ++ F +A+D
Sbjct: 176 GQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAID 235
Query: 104 TFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYS 163
F M+ EG A++ + SV+ +CA LG+++FG + + VVKS L LG+ L DM+
Sbjct: 236 LFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFW 295
Query: 164 KCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCS 223
+CG++ A VFE +P D + W+S+I G +G+ KA+ + +M++ +
Sbjct: 296 RCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTA 355
Query: 224 TLSACTALKAFSFGKSLHAIIVK-FGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGC 282
LSAC+ G ++ + K G E + D+ ++G + A N
Sbjct: 356 VLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVK 415
Query: 283 RNIVSFTAIVDG---YVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQ 333
N A++ Y + E+ N I ++ + S I ACA Q
Sbjct: 416 PNAPILGALLGACKIYKNTEVAERVGNMLIKVKPE--HSGYYVLLSNIYACAGQ 467
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 195/431 (45%), Gaps = 52/431 (12%)
Query: 5 NLFRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNL---- 60
N RF+H L+Q+C+ +L K +H L+R + F+ + LL L
Sbjct: 7 NTLRFKH------PKLALLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALCVDD 57
Query: 61 --YSKCGEL-DYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQ 117
++K L YA +F ++ N+ + +I F +A + QM
Sbjct: 58 STFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDN 117
Query: 118 FALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEE 177
+++A + + + G Q H +V+ GF ++++ ++L MY+ CG ++ A ++F +
Sbjct: 118 ITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQ 177
Query: 178 MPCKDEVLWTSMI-------------------------------DGYVKNGNFEKALIAY 206
M +D V WTSM+ +GY KN FEKA+ +
Sbjct: 178 MGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLF 237
Query: 207 KKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKS 266
+ M + V ++ V+ S +S+C L A FG+ + +VK +G AL D++ +
Sbjct: 238 EFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRC 297
Query: 267 GDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSL 326
GD+ A +VF+ ++ S+++I+ G KA++ F + + G P + TF+++
Sbjct: 298 GDIEKAIHVFEGLPETDSL-SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAV 356
Query: 327 IKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFDHSIQLFDEIE-N 383
+ AC++ +E G ++ + +K + +P + +VDM G+ G + ++
Sbjct: 357 LSACSHGGLVEKGLEIY-ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVK 415
Query: 384 PNDTAWNTLVG 394
PN L+G
Sbjct: 416 PNAPILGALLG 426
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/676 (31%), Positives = 350/676 (51%), Gaps = 48/676 (7%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLL--NLYSKCGELDYAIKLFDRMSK 79
L+ +C + L+ Q+H I+ G ++ T L+ S L YA +L +
Sbjct: 11 LLNSCKNLRALT---QIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPE 67
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET-ASQFALSSVLQACASLGSIQFGVQ 138
+ + ++ G+ S ++ F +M +G F+ + V++A + S++ G Q
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGN 198
+HC +K G LF+G+ L MY CG V A KVF+EM + V W ++I + +
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 199 FEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNA 258
+A + + D + + H N
Sbjct: 188 -----VAGAREIFDKMLVRNHTSW----------------------------------NV 208
Query: 259 LTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEP 318
+ Y K+G++ SA +F S+ R+ VS++ ++ G ++ F +L+ +G+ P
Sbjct: 209 MLAGYIKAGELESAKRIF-SEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSP 267
Query: 319 NEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLF 378
NE + + ++ AC+ E G +LHG V K + V++AL+DMY +CG + +F
Sbjct: 268 NEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVF 327
Query: 379 DEIENPN-DTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMV 437
+ ++ +W +++ A HG G A+ FNEM G+ P+ ++F++LL CSHAG++
Sbjct: 328 EGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLI 387
Query: 438 EDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLG 497
E+G +YF M ++Y + P EHY C++DL GR+GKL++ DFI MP PTA W + LG
Sbjct: 388 EEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLG 447
Query: 498 ACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKL 557
AC +HG+ E A+ +L +L+P NSG VLLSN YA +W+DV +RK + +KK
Sbjct: 448 ACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKT 507
Query: 558 PGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIK-IVGYVPQTESVLIEMDDTL 616
+S V++G + F + E +EKL ++ ++K GY P+ S L ++++
Sbjct: 508 TAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEE 567
Query: 617 KEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDIS 676
KE + HSE++A+A++L G I + KNLR+C DCH+ K SKV I+VRD +
Sbjct: 568 KEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRN 627
Query: 677 RFHHFSNGSCSCGDYW 692
RFH F +GSCSC DYW
Sbjct: 628 RFHSFKDGSCSCRDYW 643
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 193/412 (46%), Gaps = 51/412 (12%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS + A +I+ + L G Q+H Q ++ G F+ L+ +Y CG +++A K+F
Sbjct: 105 DSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVF 164
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
D M + N+V+W A+IT FR A + F +M T+ L+
Sbjct: 165 DEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAG------------ 212
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
Y K GE+ A ++F EMP +D+V W++MI G
Sbjct: 213 ---------------------------YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 245
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
NG+F ++ + ++++ + ++ L LSAC+ +F FGK LH + K G+ +
Sbjct: 246 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVS 305
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+ NAL D+YS+ G++ A VF+ R IVS+T+++ G Q E+A+ F ++
Sbjct: 306 VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAY 365
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFD 372
G+ P+ +F SL+ AC++ +E G ++ + + +P + +VD+YG+ G
Sbjct: 366 GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRV-YHIEPEIEHYGCMVDLYGRSGKLQ 424
Query: 373 HSIQLFDEIE-NPNDTAWNTLVGVFAQHG---LGRNAIETFNEMVDRGLKPN 420
+ ++ P W TL+G + HG L + NE L PN
Sbjct: 425 KAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNE-----LDPN 471
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 130/302 (43%), Gaps = 21/302 (6%)
Query: 216 IDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET-FIGNALTDLYSKSGDMVSASN 274
I H S L++C L+A + +H + +K+G + ++ F G + D + +
Sbjct: 3 IAIHHCLSLLNSCKNLRALT---QIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYAR 59
Query: 275 VFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSG-IEPNEFTFSSLIKACANQ 333
+ F +V GY E D+ ++ F+++ G + P+ F+F+ +IKA N
Sbjct: 60 RLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENF 119
Query: 334 AKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLV 393
L G +H Q +K + FV + L+ MYG CG + + ++FDE+ PN AWN ++
Sbjct: 120 RSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVI 179
Query: 394 GVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGV 453
+ A E F++M+ R N ++ +L G AG +E S +I+
Sbjct: 180 TACFRGNDVAGAREIFDKMLVR----NHTSWNVMLAGYIKAGELE-------SAKRIFSE 228
Query: 454 MPREEHYNCIIDLLGRAGKLKEVEDF-----INSMPFEPTAFGWCSFLGACKTHGDKERA 508
MP + + ++G A E F + P L AC G E
Sbjct: 229 MPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG 288
Query: 509 KL 510
K+
Sbjct: 289 KI 290
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 207/616 (33%), Positives = 324/616 (52%), Gaps = 50/616 (8%)
Query: 123 VLQACASLGSIQFGVQVHCLVVKSGF--GCELFLGSNLTDMYSKCGEVSDACKVFEEMPC 180
+L+ CA ++ G ++H ++ SG +L + L Y+ GE+ A K+F+E+P
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 181 --KDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGK 238
KD V WT+++ + + G ++ + +M V ID + C L+ F +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 239 SLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEM 298
H + VK G + NAL D+Y K G + +F+ +++VS+T ++D V+
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEE-KSVVSWTVVLDTVVKW 190
Query: 299 DQLEKALNAFIDL--RNS------------------------------GIEPNEFTFSSL 326
+ LE+ F ++ RN+ G N T S+
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 327 IKACANQAKLEHGSLLHGQVVK--------FNFDRDPFVSSALVDMYGKCGLFDHSIQLF 378
+ ACA L G +H +K ++D D V +ALVDMY KCG D S+ +F
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYD-DVMVGTALVDMYAKCGNIDSSMNVF 309
Query: 379 DEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVE 438
+ N WN L A HG GR I+ F +M+ R +KP+ +TF +L CSH+G+V+
Sbjct: 310 RLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMI-REVKPDDLTFTAVLSACSHSGIVD 368
Query: 439 DGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGA 498
+G F+S+ + YG+ P+ +HY C++DLLGRAG ++E E + MP P S LG+
Sbjct: 369 EGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGS 427
Query: 499 CKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLP 558
C HG E A+ +L+++ P N+ +L+SN+Y E + + LR +R ++K+P
Sbjct: 428 CSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIP 487
Query: 559 GYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTL-- 616
G S + + + H F D SHPR KEIY KL+ ++++I+ GYVP ++ + L
Sbjct: 488 GLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEE 547
Query: 617 KEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDIS 676
KE+ L HSE++AV + LL + P++V KNLR+C DCHSA K +SKV +R II+RD +
Sbjct: 548 KEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRN 607
Query: 677 RFHHFSNGSCSCGDYW 692
RFH F GSCSC DYW
Sbjct: 608 RFHQFKGGSCSCSDYW 623
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 200/432 (46%), Gaps = 54/432 (12%)
Query: 17 KAVAQLIQTCAQAKELSKGKQLHAQLIRGGC--LPCTFLTNHLLNLYSKCGELDYAIKLF 74
+ V L++ CA L GK+LHA L G P ++L+N L Y+ GE+ A KLF
Sbjct: 7 QKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLF 66
Query: 75 DR--MSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGS 132
D +S+++ V WT +++ F R ++ F +MR + ++ + CA L
Sbjct: 67 DEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLED 126
Query: 133 IQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFE---------------- 176
+ F Q H + VK G + + + L DMY KCG VS+ ++FE
Sbjct: 127 LGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDT 186
Query: 177 ---------------EMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQH-- 219
EMP ++ V WT M+ GY+ G + L +++ + VF H
Sbjct: 187 VVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVL----ELLAEMVFRCGHGL 242
Query: 220 ---VLCSTLSACTALKAFSFGKSLHAIIVK----FGFEY---ETFIGNALTDLYSKSGDM 269
LCS LSAC G+ +H +K G E + +G AL D+Y+K G++
Sbjct: 243 NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNI 302
Query: 270 VSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKA 329
S+ NVF+ RN+V++ A+ G + ++ F + ++P++ TF++++ A
Sbjct: 303 DSSMNVFRLMRK-RNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSA 360
Query: 330 CANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE-NPNDTA 388
C++ ++ G + + + + +VD+ G+ GL + + L E+ PN+
Sbjct: 361 CSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVV 420
Query: 389 WNTLVGVFAQHG 400
+L+G + HG
Sbjct: 421 LGSLLGSCSVHG 432
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 358 bits (920), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 189/552 (34%), Positives = 306/552 (55%), Gaps = 42/552 (7%)
Query: 182 DEVLWTSMIDGYVKNGNFEK---ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGK 238
+ LW +I V N + + + Y +M V D H L + G+
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 239 SLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGC---------------- 282
HA I+ FG + + F+ +L ++YS GD+ SA VF DSG
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFD-DSGSKDLPAWNSVVNAYAKA 141
Query: 283 ---------------RNIVSFTAIVDGYVEMDQLEKALNAFIDLR-----NSGIEPNEFT 322
RN++S++ +++GYV + ++AL+ F +++ + + PNEFT
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 323 FSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE 382
S+++ AC LE G +H + K++ + D + +AL+DMY KCG + + ++F+ +
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 383 NPNDT-AWNTLVGVFAQHGLGRNAIETFNEMVDR-GLKPNAVTFVNLLKGCSHAGMVEDG 440
+ D A++ ++ A +GL + F+EM + PN+VTFV +L C H G++ +G
Sbjct: 262 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 321
Query: 441 LNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACK 500
+YF M + +G+ P +HY C++DL GR+G +KE E FI SMP EP W S L +
Sbjct: 322 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 381
Query: 501 THGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGY 560
GD + + A +L++L+P NSGA+VLLSN+YAK +W +V+C+R + + K+PG
Sbjct: 382 MLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGC 441
Query: 561 SWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKL 620
S+V++ H F V D S + IY LD ++ +++ GYV T+ VL+++++ KE
Sbjct: 442 SYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIA 501
Query: 621 LHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHH 680
L HSE++A+A+ L+ + G P+ + KNLR+C DCH K ISK+ R I+VRD +RFHH
Sbjct: 502 LSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHH 561
Query: 681 FSNGSCSCGDYW 692
F +GSCSC D+W
Sbjct: 562 FRDGSCSCRDFW 573
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 153/328 (46%), Gaps = 44/328 (13%)
Query: 32 LSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGEL------------------------ 67
L G++ HAQ++ G F+ LLN+YS CG+L
Sbjct: 78 LPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA 137
Query: 68 -------DYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET-----A 115
D A KLFD M +RN++SW+ +I G+ +++EALD F +M+
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 116 SQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVF 175
++F +S+VL AC LG+++ G VH + K ++ LG+ L DMY+KCG + A +VF
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 176 EEMPCKDEV-LWTSMIDGYVKNGNFEKALIAYKKMVT-DNVFIDQHVLCSTLSACTALKA 233
+ K +V +++MI G ++ + +M T DN+ + L AC
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 234 FSFGKSLHAIIV-KFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIV 292
+ GKS +++ +FG + DLY +SG + A + S +++ + +++
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Query: 293 DGYVEMDQL---EKALNAFIDL--RNSG 315
G + + E AL I+L NSG
Sbjct: 378 SGSRMLGDIKTCEGALKRLIELDPMNSG 405
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 140/301 (46%), Gaps = 41/301 (13%)
Query: 133 IQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGE------------------------- 167
+ G + H ++ G + F+ ++L +MYS CG+
Sbjct: 78 LPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA 137
Query: 168 ------VSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMV---TDNVFI-- 216
+ DA K+F+EMP ++ + W+ +I+GYV G +++AL +++M + F+
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 217 DQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVF 276
++ + + LSAC L A GK +HA I K+ E + +G AL D+Y+K G + A VF
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 277 QSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS-GIEPNEFTFSSLIKACANQAK 335
+ +++ +++A++ ++ F ++ S I PN TF ++ AC ++
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 336 LEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTL 392
+ G +++ F P + +VD+YG+ GL + + P+ W +L
Sbjct: 318 INEGKSYFKMMIE-EFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSL 376
Query: 393 V 393
+
Sbjct: 377 L 377
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 358 bits (919), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 203/687 (29%), Positives = 350/687 (50%), Gaps = 48/687 (6%)
Query: 10 RHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDY 69
R D LI C K+ + + +HAQ++R G L + + L++ S DY
Sbjct: 23 RQASPDESHFISLIHAC---KDTASLRHVHAQILRRGVL-SSRVAAQLVSCSSLLKSPDY 78
Query: 70 AIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACAS 129
++ +F +RN A+I G + RF ++ F M G + VL++ +
Sbjct: 79 SLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSK 138
Query: 130 LGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP--CKDE--VL 185
LG G +H +K+ C+ F+ +L DMY+K G++ A +VFEE P K E ++
Sbjct: 139 LGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILI 198
Query: 186 WTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIV 245
W +I+GY + + A ++ M N + S T +K
Sbjct: 199 WNVLINGYCRAKDMHMATTLFRSMPERN----------SGSWSTLIKG------------ 236
Query: 246 KFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKAL 305
Y SG++ A +F+ +N+VS+T +++G+ + E A+
Sbjct: 237 -----------------YVDSGELNRAKQLFELMPE-KNVVSWTTLINGFSQTGDYETAI 278
Query: 306 NAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMY 365
+ + ++ G++PNE+T ++++ AC+ L G +HG ++ D + +ALVDMY
Sbjct: 279 STYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMY 338
Query: 366 GKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFV 425
KCG D + +F + + + +W ++ +A HG AI+ F +M+ G KP+ V F+
Sbjct: 339 AKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFL 398
Query: 426 NLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPF 485
+L C ++ V+ GLN+F SM Y + P +HY ++DLLGRAGKL E + + +MP
Sbjct: 399 AVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPI 458
Query: 486 EPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCL 545
P W + ACK H RA+ + L++L+PE G+++ L +A + +DV
Sbjct: 459 NPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKR 518
Query: 546 RKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQT 605
R ++ ++ G+S++++ + + F D+SH +EI KLD ++ GY P
Sbjct: 519 RLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGA 578
Query: 606 ESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKV 665
+ + ++++ KE + HSE++A+ L + G I + KNLR+C DCHS KY+SK+
Sbjct: 579 DWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKI 638
Query: 666 TERNIIVRDISRFHHFSNGSCSCGDYW 692
++R+I++RD +FHHF +G CSCGDYW
Sbjct: 639 SQRDILLRDARQFHHFKDGRCSCGDYW 665
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 358 bits (918), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 207/591 (35%), Positives = 329/591 (55%), Gaps = 25/591 (4%)
Query: 122 SVLQACASLGSIQFGVQVHCLVVKSGFGCE---LFLGSNLTDMYSKCGEVSDACKVFEEM 178
S+ + C+ + ++ Q+H +++ + E LFL + + S +V+ A +VF+ +
Sbjct: 53 SLAETCSDMSQLK---QLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSI 109
Query: 179 PCKDEVLWTSMIDGYVKN-GNFEKALIAYKKMVT-DNVFIDQHVLCSTLSACTALKAFSF 236
+W ++I + E+A + Y+KM+ D+H L AC + FS
Sbjct: 110 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSE 169
Query: 237 GKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYV 296
GK +H IVK GF + ++ N L LY G + A VF + R++VS+ +++D V
Sbjct: 170 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFD-EMPERSLVSWNSMIDALV 228
Query: 297 EMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVK---FNFDR 353
+ + AL F +++ S EP+ +T S++ ACA L G+ H +++ +
Sbjct: 229 RFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAM 287
Query: 354 DPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMV 413
D V ++L++MY KCG + Q+F ++ + +WN ++ FA HG A+ F+ MV
Sbjct: 288 DVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
Query: 414 DR--GLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAG 471
D+ ++PN+VTFV LL C+H G V G YF M + Y + P EHY CI+DL+ RAG
Sbjct: 348 DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAG 407
Query: 472 KLKEVEDFINSMPFEPTAFGWCSFLGAC-KTHGDKERAKLAAYKLMKLEPEN-------S 523
+ E D + SMP +P A W S L AC K E ++ A ++ + +N S
Sbjct: 408 YITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCS 467
Query: 524 GAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKK 583
GA+VLLS +YA +W DV +RK++ + ++K PG S ++I +H F D SHP+ K
Sbjct: 468 GAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTK 527
Query: 584 EIYEKLDSLLDQIKIVGYVP-QTESVLIE-MDDTLKEKLLHNHSERIAVAYSLLVSPIGK 641
+IY++L + D+++ +GY+P ++++ L++ +D KE L HSER+A+A+ L+ P
Sbjct: 528 QIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQT 587
Query: 642 PIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
PI + KNLRVC+DCH K ISKV IIVRD RFHHF +GSCSC DYW
Sbjct: 588 PIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 205/414 (49%), Gaps = 29/414 (7%)
Query: 17 KAVAQLIQTCAQAKELSKGKQLHAQLIRGGCL--PCT-FLTNHLLNLYSKCGELDYAIKL 73
+ + L +TC+ ++S+ KQLHA +R P T FL +L L S +++YA ++
Sbjct: 49 QRIFSLAETCS---DMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRV 105
Query: 74 FDRMSKRNMVSWTAMITGFFRSL-RFREALDTFCQMRAEGETAS-QFALSSVLQACASLG 131
FD + + W +I + R EA + +M GE++ + VL+ACA +
Sbjct: 106 FDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF 165
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMID 191
G QVHC +VK GFG ++++ + L +Y CG + A KVF+EMP + V W SMID
Sbjct: 166 GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMID 225
Query: 192 GYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVK---FG 248
V+ G ++ AL +++M + D + + S LSAC L + S G HA +++
Sbjct: 226 ALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVD 284
Query: 249 FEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAF 308
+ + N+L ++Y K G + A VFQ R++ S+ A++ G+ + E+A+N F
Sbjct: 285 VAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQK-RDLASWNAMILGFATHGRAEEAMNFF 343
Query: 309 ---IDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVD 363
+D R + + PN TF L+ AC ++ + G +V+ ++ +P + +VD
Sbjct: 344 DRMVDKREN-VRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR-DYCIEPALEHYGCIVD 401
Query: 364 MYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHG--------LGRNAIET 408
+ + G +I + + P+ W +L+ + G + RN I T
Sbjct: 402 LIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGT 455
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 21/197 (10%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPC---TFLTNHLLNLYSKCGELDYAI 71
D + ++ CA LS G HA L+R + + N L+ +Y KCG L A
Sbjct: 250 DGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAE 309
Query: 72 KLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQM--RAEGETASQFALSSVLQACAS 129
++F M KR++ SW AMI GF R EA++ F +M + E + +L AC
Sbjct: 310 QVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNH 369
Query: 130 LGSIQFGVQVHCLVVK--------SGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK 181
G + G Q ++V+ +GC + D+ ++ G +++A + MP K
Sbjct: 370 RGFVNKGRQYFDMMVRDYCIEPALEHYGC-------IVDLIARAGYITEAIDMVMSMPMK 422
Query: 182 -DEVLWTSMIDGYVKNG 197
D V+W S++D K G
Sbjct: 423 PDAVIWRSLLDACCKKG 439
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 356 bits (913), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 193/610 (31%), Positives = 329/610 (53%), Gaps = 3/610 (0%)
Query: 7 FRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGE 66
R + L ++ +A + + + + + G+Q HA +++ ++ L+ +Y K G
Sbjct: 109 MRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGL 168
Query: 67 LDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQ--FALSSVL 124
++ +K+F M +RN +W+ M++G+ R EA+ F E E S + ++VL
Sbjct: 169 VEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVL 228
Query: 125 QACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEV 184
+ A+ + G Q+HC+ +K+G + L + L MYSKC +++ACK+F+ ++ +
Sbjct: 229 SSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSI 288
Query: 185 LWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAII 244
W++M+ GY +NG +A+ + +M + + ++ + L+AC+ + GK LH+ +
Sbjct: 289 TWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFL 348
Query: 245 VKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKA 304
+K GFE F AL D+Y+K+G + A F R++ +T+++ GYV+ E+A
Sbjct: 349 LKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE-RDVALWTSLISGYVQNSDNEEA 407
Query: 305 LNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDM 364
L + ++ +GI PN+ T +S++KAC++ A LE G +HG +K F + + SAL M
Sbjct: 408 LILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTM 467
Query: 365 YGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTF 424
Y KCG + +F N + +WN ++ + +G G A+E F EM+ G++P+ VTF
Sbjct: 468 YSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTF 527
Query: 425 VNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMP 484
VN++ CSH G VE G YF M G+ P+ +HY C++DLL RAG+LKE ++FI S
Sbjct: 528 VNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESAN 587
Query: 485 FEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRC 544
+ W L ACK HG E A KLM L S +V LS IY + DV
Sbjct: 588 IDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVER 647
Query: 545 LRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQ 604
+ K +R + K G SW+++ N+ HVF V D HP +E + + + Q+ G+V
Sbjct: 648 VWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTV 707
Query: 605 TESVLIEMDD 614
+S +E ++
Sbjct: 708 LDSSFVEEEE 717
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 229/426 (53%), Gaps = 20/426 (4%)
Query: 27 AQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWT 86
+Q + L G+ +H Q+IR G C N L+N Y+KCG+L A +F+ + +++VSW
Sbjct: 25 SQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWN 84
Query: 87 AMITGFFRSLRFREA---LDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLV 143
++ITG+ ++ + + F +MRA+ + + L+ + +A +SL S G Q H LV
Sbjct: 85 SLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALV 144
Query: 144 VK-SGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKA 202
VK S FG ++++ ++L MY K G V D KVF MP ++ W++M+ GY G E+A
Sbjct: 145 VKMSSFG-DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEA 203
Query: 203 LIAYKKMVTDNVFIDQ--------HVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+ + N+F+ + +V + LS+ A G+ +H I +K G
Sbjct: 204 IKVF------NLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVA 257
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+ NAL +YSK + A +F S SG RN ++++A+V GY + + +A+ F + ++
Sbjct: 258 LSNALVTMYSKCESLNEACKMFDS-SGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
GI+P+E+T ++ AC++ LE G LH ++K F+R F ++ALVDMY K G +
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 375 IQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHA 434
+ FD ++ + W +L+ + Q+ A+ + M G+ PN T ++LK CS
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSL 436
Query: 435 GMVEDG 440
+E G
Sbjct: 437 ATLELG 442
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 15/201 (7%)
Query: 316 IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSI 375
+ P+ T + + Q L G +HGQ+++ ++ LV+ Y KCG +
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 376 QLFDEIENPNDTAWNTLVGVFAQHG---LGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
+F+ I + +WN+L+ ++Q+G ++ F EM + + PNA T + K
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA-- 127
Query: 433 HAGMVEDGLNYFYSMDKIYGVMPREEHYNCI---IDLLGRAGKLKEVEDFINSMPFEP-- 487
E L + + ++ + + I L+G K VED + + P
Sbjct: 128 -----ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
Query: 488 TAFGWCSFLGACKTHGDKERA 508
+ W + + T G E A
Sbjct: 183 NTYTWSTMVSGYATRGRVEEA 203
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 355 bits (911), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 211/710 (29%), Positives = 352/710 (49%), Gaps = 39/710 (5%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSK--CGELDYAIKLFDRMSK 79
++ C + S G Q+H +++ G L F++N L++LY K D +KLFD + +
Sbjct: 187 ILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQ 246
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQM-RAEGETASQFALSSVLQACASLGSIQFGVQ 138
R++ SW +++ + + +A D F +M R EG F LS++L +C + G +
Sbjct: 247 RDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRE 306
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV---- 194
+H ++ G EL + + L YSK ++ ++E M +D V +T MI Y+
Sbjct: 307 LHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGM 366
Query: 195 ---------------------------KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSA 227
+NG+ KAL + M+ V + L S + A
Sbjct: 367 VDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDA 426
Query: 228 CTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVF-QSDSGCRNIV 286
C + + +H +KFG + I AL D+ ++ M A +F Q S +
Sbjct: 427 CGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSK 486
Query: 287 SFTAIVDGYVEMDQLEKALNAF-IDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQ 345
+ T+I+ GY +KA++ F L + +E + + ++ C E G +H
Sbjct: 487 ATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCY 546
Query: 346 VVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNA 405
+K + D + ++L+ MY KC D +I++F+ + + +WN+L+ + G A
Sbjct: 547 ALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEA 606
Query: 406 IETFNEMVDRGLKPNAVTFVNLLKG--CSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCI 463
+ ++ M ++ +KP+ +T ++ + + + + F SM IY + P EHY
Sbjct: 607 LALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAF 666
Query: 464 IDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENS 523
+ +LG G L+E ED INSMP +P + L +C+ H + AK A ++ +PE
Sbjct: 667 VRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETP 726
Query: 524 GAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKK 583
++L SNIY+ W +R+ +R+ +K P SW+ N+ H F D SHP++K
Sbjct: 727 SEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEK 786
Query: 584 EIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPI-GKP 642
+IY L+ L+ + VGY P TE VL E+D+ +K+ L +HS ++AV Y +L S GKP
Sbjct: 787 DIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKP 846
Query: 643 IIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
+ V KN+ +C DCH FKYIS V +R I++RD S FHHF NG CSC D W
Sbjct: 847 VRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 218/456 (47%), Gaps = 38/456 (8%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
L++ AQ ++ K +HA ++ T L N L++ Y K G AI +F +S
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPT 144
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGET-ASQFALSSVLQACASLGSIQFGVQVH 140
+VS+TA+I+GF R EAL F +MR G +++ ++L AC + G+Q+H
Sbjct: 145 VVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIH 204
Query: 141 CLVVKSGFGCELFLGSNLTDMYSKCGEVS--DACKVFEEMPCKDEVLWTSMIDGYVKNGN 198
L+VKSGF +F+ ++L +Y K S D K+F+E+P +D W +++ VK G
Sbjct: 205 GLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGK 264
Query: 199 FEKALIAYKKMVTDNVF-IDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGN 257
KA + +M F +D L + LS+CT G+ LH ++ G E + N
Sbjct: 265 SHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNN 324
Query: 258 ALTDLYSKSGDMVSASNVFQS----------------------DSGC--------RNIVS 287
AL YSK DM ++++ DS +N ++
Sbjct: 325 ALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTIT 384
Query: 288 FTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVV 347
+ A++ G+ KAL F D+ G+E +F+ +S + AC ++ + +HG +
Sbjct: 385 YNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCI 444
Query: 348 KFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDT--AWNTLVGVFAQHGLGRNA 405
KF +P + +AL+DM +C + ++FD+ + D+ A +++G +A++GL A
Sbjct: 445 KFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKA 504
Query: 406 IETFNE-MVDRGLKPNAVTFVNLLKGCSHAGMVEDG 440
+ F+ + ++ L + V+ +L C G E G
Sbjct: 505 VSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG 540
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 197/451 (43%), Gaps = 66/451 (14%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSK----------- 63
DS ++ L+ +C + L +G++LH + IR G + + N L+ YSK
Sbjct: 284 DSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLY 343
Query: 64 --------------------CGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALD 103
G +D A+++F ++++N +++ A++ GF R+ +AL
Sbjct: 344 EMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALK 403
Query: 104 TFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYS 163
F M G + F+L+S + AC + + Q+H +K G + + L DM +
Sbjct: 404 LFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCT 463
Query: 164 KCGEVSDACKVFEEMPCK--DEVLWTSMIDGYVKNGNFEKAL-IAYKKMVTDNVFIDQHV 220
+C ++DA ++F++ P TS+I GY +NG +KA+ + ++ + +F+D+
Sbjct: 464 RCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVS 523
Query: 221 LCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDS 280
L L+ C L G +H +K G+ + +GN+L +Y+K D A +F +
Sbjct: 524 LTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMR 583
Query: 281 GCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGS 340
+++S+ +++ Y+ ++AL + + I+P+ T + +I A
Sbjct: 584 E-HDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISA----------- 631
Query: 341 LLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHG 400
+ + K + RD F+ S++ +IE P + V V G
Sbjct: 632 FRYTESNKLSSCRDLFL----------------SMKTIYDIE-PTTEHYTAFVRVLGHWG 674
Query: 401 LGRNAIETFNEMVDRGLKPNAVTFVNLLKGC 431
L A +T N M ++P LL C
Sbjct: 675 LLEEAEDTINSM---PVQPEVSVLRALLDSC 702
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 126/253 (49%), Gaps = 13/253 (5%)
Query: 238 KSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVE 297
K++HA +K E +T +GNAL Y K G A VF S S +VS+TA++ G+
Sbjct: 100 KAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSS-PTVVSYTALISGFSR 157
Query: 298 MDQLEKALNAFIDLRNSG-IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPF 356
++ +AL F +R +G ++PNE+TF +++ AC ++ G +HG +VK F F
Sbjct: 158 LNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVF 217
Query: 357 VSSALVDMYGK-----CGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNE 411
VS++L+ +Y K C D ++LFDEI + +WNT+V + G A + F E
Sbjct: 218 VSNSLMSLYDKDSGSSC---DDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYE 274
Query: 412 MVD-RGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRA 470
M G ++ T LL C+ + ++ G +I G+M N +I +
Sbjct: 275 MNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRI-GLMQELSVNNALIGFYSKF 333
Query: 471 GKLKEVEDFINSM 483
+K+VE M
Sbjct: 334 WDMKKVESLYEMM 346
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 9 FRHKLCDSK------AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYS 62
F LC+ K ++ ++ C G Q+H ++ G L N L+++Y+
Sbjct: 508 FHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYA 567
Query: 63 KCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSS 122
KC + D AIK+F+ M + +++SW ++I+ + EAL + +M + L+
Sbjct: 568 KCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTL 627
Query: 123 VLQA 126
V+ A
Sbjct: 628 VISA 631
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 355 bits (910), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 199/568 (35%), Positives = 322/568 (56%), Gaps = 16/568 (2%)
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGN 198
+H L +K GF + F ++L Y K E++ A K+F+EM + V WTS+I GY G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 199 FEKALIAYKKMVTDN-VFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGN 257
+ AL ++KM D V +++ S AC+AL GK++HA + G + +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 258 ALTDLYSKSGDMVSASNVFQSDSG-CRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI 316
+L D+Y K D+ +A VF S G RN+VS+T+++ Y + + +A+ F N+ +
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSF-NAAL 229
Query: 317 ---EPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
N+F +S+I AC++ +L+ G + HG V + ++ + V+++L+DMY KCG
Sbjct: 230 TSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 374 SIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSH 433
+ ++F I + ++ +++ A+HGLG A++ F+EMV + PN VT + +L CSH
Sbjct: 290 AEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSH 349
Query: 434 AGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPF--EPTAFG 491
+G+V +GL Y M + YGV+P HY C++D+LGR G++ E + ++ E A
Sbjct: 350 SGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALL 409
Query: 492 WCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLR-KMIR 550
W + L A + HG E A+ +L++ + + A++ LSN YA WED LR +M R
Sbjct: 410 WGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKR 469
Query: 551 DGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGY------VPQ 604
GN+K+ SW++ + +VF D S EI L L ++K G+ +
Sbjct: 470 SGNVKE-RACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITT 528
Query: 605 TESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISK 664
+ SV +++D+ K++++ H ER+A+AY LL P G I + NLR+C DCH AFK IS+
Sbjct: 529 SSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISE 588
Query: 665 VTERNIIVRDISRFHHFSNGSCSCGDYW 692
+ ER I+VRD++RFH F NGSC+C DYW
Sbjct: 589 IVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 204/415 (49%), Gaps = 18/415 (4%)
Query: 17 KAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDR 76
K A L+ +++ + LH ++ G TF NHL+ Y K E++ A KLFD
Sbjct: 30 KTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDE 89
Query: 77 MSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET-ASQFALSSVLQACASLGSIQF 135
M + N+VSWT++I+G+ + + AL F +M + +++ +SV +AC++L +
Sbjct: 90 MCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRI 149
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP--CKDEVLWTSMIDGY 193
G +H + SG + + S+L DMY KC +V A +VF+ M ++ V WTSMI Y
Sbjct: 150 GKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAY 209
Query: 194 VKNGNFEKALIAYKK----MVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF 249
+N +A+ ++ + +D +Q +L S +SAC++L +GK H ++ + G+
Sbjct: 210 AQNARGHEAIELFRSFNAALTSDRA--NQFMLASVISACSSLGRLQWGKVAHGLVTRGGY 267
Query: 250 EYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFI 309
E T + +L D+Y+K G + A +F C +++S+T+++ + E A+ F
Sbjct: 268 ESNTVVATSLLDMYAKCGSLSCAEKIFLRIR-CHSVISYTSMIMAKAKHGLGEAAVKLFD 326
Query: 310 DLRNSGIEPNEFTFSSLIKACANQAKLEHG-SLLHGQVVKFNFDRDPFVSSALVDMYGKC 368
++ I PN T ++ AC++ + G L K+ D + +VDM G+
Sbjct: 327 EMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRF 386
Query: 369 GLFDHSIQLFDEIENPNDTA---WNTLVGVFAQHGLGRNAIETFNEMVDRGLKPN 420
G D + +L IE + W L+ HG +E +E R ++ N
Sbjct: 387 GRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHG----RVEIVSEASKRLIQSN 437
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/596 (31%), Positives = 337/596 (56%), Gaps = 6/596 (1%)
Query: 6 LFRFRH---KLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCT-FLTNHLLNLY 61
LFR H +S + + C GK++HA +++ ++ N L+ +Y
Sbjct: 271 LFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMY 330
Query: 62 SKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALS 121
++CG++ A ++ +M+ ++V+W ++I G+ ++L ++EAL+ F M A G + + +++
Sbjct: 331 TRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMT 390
Query: 122 SVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK 181
S++ A L ++ G+++H V+K G+ L +G+ L DMYSKC + F M K
Sbjct: 391 SIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK 450
Query: 182 DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLH 241
D + WT++I GY +N +AL ++ + + ID+ +L S L A + LK+ K +H
Sbjct: 451 DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIH 510
Query: 242 AIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQL 301
I++ G +T I N L D+Y K +M A+ VF+S G +++VS+T+++
Sbjct: 511 CHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKG-KDVVSWTSMISSSALNGNE 568
Query: 302 EKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSAL 361
+A+ F + +G+ + ++ A A+ + L G +H +++ F + ++ A+
Sbjct: 569 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 628
Query: 362 VDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNA 421
VDMY CG + +FD IE + +++ + HG G+ A+E F++M + P+
Sbjct: 629 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDH 688
Query: 422 VTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFIN 481
++F+ LL CSHAG++++G + M+ Y + P EHY C++D+LGRA + E +F+
Sbjct: 689 ISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVK 748
Query: 482 SMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWED 541
M EPTA WC+ L AC++H +KE ++AA +L++LEP+N G VL+SN++A++ +W D
Sbjct: 749 MMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWND 808
Query: 542 VRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIK 597
V +R ++ M+K PG SW+++ + H F D SHP KEIYEKL + +++
Sbjct: 809 VEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 220/419 (52%), Gaps = 4/419 (0%)
Query: 17 KAVAQLIQTCAQAKELSKGKQLHAQLIRG-GCLPCTFLTNHLLNLYSKCGELDYAIKLFD 75
+A A +++ C + + +S+G+QLH+++ + FL L+ +Y KCG LD A K+FD
Sbjct: 81 EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 76 RMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQF 135
M R +W MI + + AL + MR EG + ++L+ACA L I+
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMIDGYV 194
G ++H L+VK G+ F+ + L MY+K ++S A ++F+ K D VLW S++ Y
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFG-FEYET 253
+G + L +++M + + + S L+AC GK +HA ++K E
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
++ NAL +Y++ G M A + + + ++V++ +++ GYV+ ++AL F D+
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNA-DVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
+G + +E + +S+I A + L G LH V+K +D + V + L+DMY KC L +
Sbjct: 380 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 439
Query: 374 SIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
+ F + + + +W T++ +AQ+ A+E F ++ + ++ + + ++L+ S
Sbjct: 440 MGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 132/305 (43%), Gaps = 34/305 (11%)
Query: 313 NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF--NFDRDPFVSSALVDMYGKCGL 370
NS +E F+ +++ C + + G LH ++ K +F+ D F++ LV MYGKCG
Sbjct: 77 NSPVE----AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGS 131
Query: 371 FDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKG 430
D + ++FDE+ + AWNT++G + +G +A+ + M G+ +F LLK
Sbjct: 132 LDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKA 191
Query: 431 CSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAF 490
C+ + G + +S+ G N ++ + + L + + A
Sbjct: 192 CAKLRDIRSG-SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAV 250
Query: 491 GWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIR 550
W S L + T G K L ++ M + ++ ++S + A +
Sbjct: 251 LWNSILSSYSTSG-KSLETLELFREMHMTGPAPNSYTIVSALTACD-------------- 295
Query: 551 DGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLI 610
G+S+ +G E H ++ +H E+Y ++L+ G +PQ E +L
Sbjct: 296 --------GFSYAKLGKEIHASVLKSSTH--SSELY-VCNALIAMYTRCGKMPQAERILR 344
Query: 611 EMDDT 615
+M++
Sbjct: 345 QMNNA 349
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 185/548 (33%), Positives = 312/548 (56%), Gaps = 9/548 (1%)
Query: 19 VAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF---D 75
V +I C + + + Q+HA + + G + + L+++YSK G++D + ++F D
Sbjct: 354 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD 413
Query: 76 RMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQF 135
+ ++N+V+ MIT F +S + +A+ F +M EG +F++ S+L L +
Sbjct: 414 DIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNL 468
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVK 195
G QVH +KSG +L +GS+L +YSKCG + ++ K+F+ +P KD W SMI G+ +
Sbjct: 469 GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNE 528
Query: 196 NGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFI 255
G +A+ + +M+ D D+ L + L+ C++ + GK +H ++ G + +
Sbjct: 529 YGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL 588
Query: 256 GNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSG 315
G+AL ++YSK G + A V+ + VS ++++ GY + ++ F D+ SG
Sbjct: 589 GSALVNMYSKCGSLKLARQVYDRLPEL-DPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG 647
Query: 316 IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSI 375
+ F SS++KA A + G+ +H + K +P V S+L+ MY K G D
Sbjct: 648 FTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCC 707
Query: 376 QLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAG 435
+ F +I P+ AW L+ +AQHG A++ +N M ++G KP+ VTFV +L CSH G
Sbjct: 708 KAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGG 767
Query: 436 MVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSF 495
+VE+ + SM K YG+ P HY C++D LGR+G+L+E E FIN+M +P A W +
Sbjct: 768 LVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTL 827
Query: 496 LGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMK 555
L ACK HG+ E K+AA K ++LEP ++GA++ LSNI A+ +W++V RK+++ ++
Sbjct: 828 LAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQ 887
Query: 556 KLPGYSWV 563
K PG+S V
Sbjct: 888 KEPGWSSV 895
Score = 200 bits (508), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 146/484 (30%), Positives = 239/484 (49%), Gaps = 13/484 (2%)
Query: 24 QTCAQAKELSKGKQLHAQLIRGGCLPC-TFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM 82
Q+ ++ L K L A L+R LP FLT LL+ YS G + A KLFD + + ++
Sbjct: 56 QSNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDV 115
Query: 83 VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCL 142
VS MI+G+ + F E+L F +M G A++ + SV+ AC++L + F V C
Sbjct: 116 VSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCH 175
Query: 143 VVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKA 202
+K G+ + S L D++SK DA KVF + + W ++I G ++N N+
Sbjct: 176 TIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAV 235
Query: 203 LIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDL 262
+ +M D + S L+AC +L+ FGK + A ++K G E + F+ A+ DL
Sbjct: 236 FDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDL 294
Query: 263 YSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFT 322
Y+K G M A VF S ++VS+T ++ GY + + AL F ++R+SG+E N T
Sbjct: 295 YAKCGHMAEAMEVF-SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCT 353
Query: 323 FSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE 382
+S+I AC + + S +H V K F D V++AL+ MY K G D S Q+F++++
Sbjct: 354 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD 413
Query: 383 N-PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLK--GCSHAGMVED 439
+ N ++ F+Q AI F M+ GL+ + + +LL C + G
Sbjct: 414 DIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVH 473
Query: 440 GLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGAC 499
G Y++ G++ + + L + G L+E +PF+ A W S +
Sbjct: 474 G----YTLKS--GLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNA-CWASMISGF 526
Query: 500 KTHG 503
+G
Sbjct: 527 NEYG 530
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 131/260 (50%), Gaps = 3/260 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D +A ++ C+ L +GK++H +R G L + L+N+YSKCG L A +++
Sbjct: 550 DESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVY 609
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
DR+ + + VS +++I+G+ + ++ F M G T FA+SS+L+A A
Sbjct: 610 DRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESS 669
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G QVH + K G E +GS+L MYSK G + D CK F ++ D + WT++I Y
Sbjct: 670 LGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYA 729
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACT--ALKAFSFGKSLHAIIVKFGFEYE 252
++G +AL Y M D+ LSAC+ L S+ L++++ +G E E
Sbjct: 730 QHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFH-LNSMVKDYGIEPE 788
Query: 253 TFIGNALTDLYSKSGDMVSA 272
+ D +SG + A
Sbjct: 789 NRHYVCMVDALGRSGRLREA 808
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 348 bits (893), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 329/580 (56%), Gaps = 9/580 (1%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLP-CTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
+Q CAQ K+ G+Q+H ++R G L L+N+Y+KCG + A+ +F S+R+
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERD 125
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
+ + A+I+GF + +A++T+ +MRA G ++ S+L+ ++ + +VH
Sbjct: 126 VFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVHG 184
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDE-VLWTSMIDGYVKNGNFE 200
L K GF + ++GS L YSK V DA KVF+E+P +D+ VLW ++++GY + FE
Sbjct: 185 LAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFE 244
Query: 201 KALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALT 260
AL+ + KM + V + +H + S LSA T G+S+H + VK G + + NAL
Sbjct: 245 DALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALI 304
Query: 261 DLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNE 320
D+Y KS + A+++F++ R++ ++ +++ + + L F + SGI P+
Sbjct: 305 DMYGKSKWLEEANSIFEAMDE-RDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDI 363
Query: 321 FTFSSLIKACANQAKLEHGSLLHG-QVVKFNFDR---DPFVSSALVDMYGKCGLFDHSIQ 376
T ++++ C A L G +HG +V +R + F+ ++L+DMY KCG +
Sbjct: 364 VTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARM 423
Query: 377 LFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGM 436
+FD + + +WN ++ + G A++ F+ M G+KP+ +TFV LL+ CSH+G
Sbjct: 424 VFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGF 483
Query: 437 VEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFL 496
+ +G N+ M+ +Y ++P +HY C+ID+LGRA KL+E + S P W S L
Sbjct: 484 LNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSIL 543
Query: 497 GACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKK 556
+C+ HG+K+ A +A +L +LEPE+ G +VL+SN+Y + ++E+V +R +R N+KK
Sbjct: 544 SSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKK 603
Query: 557 LPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQI 596
PG SW+ + N H F + +HP K I++ L ++ +
Sbjct: 604 TPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHM 643
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 182/373 (48%), Gaps = 8/373 (2%)
Query: 122 SVLQACASLGSIQFGVQVHCLVVKSGF-GCELFLGSNLTDMYSKCGEVSDACKVFEEMPC 180
+ LQ CA G Q+H +V+ GF G++L +MY+KCG + A VF
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE- 123
Query: 181 KDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSL 240
+D + ++I G+V NG+ A+ Y++M + + D++ S L A++ S K +
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAME-LSDVKKV 182
Query: 241 HAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQ 300
H + K GF+ + ++G+ L YSK + A VF + V + A+V+GY ++ +
Sbjct: 183 HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFR 242
Query: 301 LEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSA 360
E AL F +R G+ + T +S++ A +++G +HG VK D VS+A
Sbjct: 243 FEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNA 302
Query: 361 LVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPN 420
L+DMYGK + + +F+ ++ + WN+++ V G + F M+ G++P+
Sbjct: 303 LIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPD 362
Query: 421 AVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEH----YNCIIDLLGRAGKLKEV 476
VT +L C + G M + G++ R+ +N ++D+ + G L++
Sbjct: 363 IVTLTTVLPTCGRLASLRQGREIHGYM-IVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDA 421
Query: 477 EDFINSMPFEPTA 489
+SM + +A
Sbjct: 422 RMVFDSMRVKDSA 434
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 4/216 (1%)
Query: 18 AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM 77
+ ++ + ++ G+ +H ++ G ++N L+++Y K L+ A +F+ M
Sbjct: 264 TITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAM 323
Query: 78 SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
+R++ +W +++ L F +M G L++VL C L S++ G
Sbjct: 324 DERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGR 383
Query: 138 QVHCLVVKSGF----GCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
++H ++ SG F+ ++L DMY KCG++ DA VF+ M KD W MI+GY
Sbjct: 384 EIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGY 443
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACT 229
E AL + M V D+ L AC+
Sbjct: 444 GVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACS 479
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 25/219 (11%)
Query: 9 FRHKLC-----DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCL----PCTFLTNHLLN 59
F LC D + ++ TC + L +G+++H +I G L F+ N L++
Sbjct: 351 FERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMD 410
Query: 60 LYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFA 119
+Y KCG+L A +FD M ++ SW MI G+ ALD F M G +
Sbjct: 411 MYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEIT 470
Query: 120 LSSVLQACASLGSI--------QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDA 171
+LQAC+ G + Q + L + C + DM + ++ +A
Sbjct: 471 FVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYAC-------VIDMLGRADKLEEA 523
Query: 172 CKVFEEMP-CKDEVLWTSMIDGYVKNGNFEKALIAYKKM 209
++ P C + V+W S++ +GN + AL+A K++
Sbjct: 524 YELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRL 562
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 348 bits (893), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 184/558 (32%), Positives = 311/558 (55%), Gaps = 8/558 (1%)
Query: 9 FRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELD 68
FR+ D ++ ++ C + ++L GK++H QL++ LT LL++Y+KCGE+
Sbjct: 138 FRY---DDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG-LLDMYAKCGEIK 193
Query: 69 YAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACA 128
A K+F+ ++ RN+V WT+MI G+ ++ E L F +MR +++ +++ AC
Sbjct: 194 SAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACT 253
Query: 129 SLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTS 188
L ++ G H +VKSG L ++L DMY KCG++S+A +VF E D V+WT+
Sbjct: 254 KLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTA 313
Query: 189 MIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFG 248
MI GY NG+ +AL ++KM + + + S LS C ++ G+S+H + +K G
Sbjct: 314 MIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVG 373
Query: 249 FEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAF 308
++T + NAL +Y+K A VF+ +S ++IV++ +I+ G+ + + +AL F
Sbjct: 374 I-WDTNVANALVHMYAKCYQNRDAKYVFEMESE-KDIVAWNSIISGFSQNGSIHEALFLF 431
Query: 309 IDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNF--DRDPFVSSALVDMYG 366
+ + + PN T +SL ACA+ L GS LH VK F V +AL+D Y
Sbjct: 432 HRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYA 491
Query: 367 KCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVN 426
KCG + +FD IE N W+ ++G + + G ++E F EM+ + KPN TF +
Sbjct: 492 KCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTS 551
Query: 427 LLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFE 486
+L C H GMV +G YF SM K Y P +HY C++D+L RAG+L++ D I MP +
Sbjct: 552 ILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQ 611
Query: 487 PTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLR 546
P + +FL C H + ++ K++ L P+++ +VL+SN+YA + +W + +R
Sbjct: 612 PDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVR 671
Query: 547 KMIRDGNMKKLPGYSWVD 564
+++ + K+ G+S ++
Sbjct: 672 NLMKQRGLSKIAGHSTME 689
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 227/484 (46%), Gaps = 8/484 (1%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
L+ C L +Q H L G + + L++LY G A +FD++ + +
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
W M+ + + E + + + G S L+AC L + G ++HC
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
+VK + L + L DMY+KCGE+ A KVF ++ ++ V WTSMI GYVKN E+
Sbjct: 167 QLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
L+ + +M +NV +++ + + ACT L A GK H +VK G E + + +L D
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLD 285
Query: 262 LYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEF 321
+Y K GD+ +A VF S ++V +TA++ GY + +AL+ F ++ I+PN
Sbjct: 286 MYVKCGDISNARRVFNEHSHV-DLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCV 344
Query: 322 TFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEI 381
T +S++ C LE G +HG +K D V++ALV MY KC + +F+
Sbjct: 345 TIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEME 403
Query: 382 ENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGL 441
+ AWN+++ F+Q+G A+ F+ M + PN VT +L C+ G + G
Sbjct: 404 SEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGS 463
Query: 442 NYFYSMDKIYGVMPREEHY-NCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACK 500
+ K+ + H ++D + G + +++ E W + +G
Sbjct: 464 SLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE-EKNTITWSAMIGGYG 522
Query: 501 THGD 504
GD
Sbjct: 523 KQGD 526
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 214/430 (49%), Gaps = 12/430 (2%)
Query: 5 NLFRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKC 64
N R + L + LI C + L +GK H L++ G + L LL++Y KC
Sbjct: 231 NRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKC 290
Query: 65 GELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVL 124
G++ A ++F+ S ++V WTAMI G+ + EAL F +M+ + ++SVL
Sbjct: 291 GDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVL 350
Query: 125 QACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEV 184
C + +++ G VH L +K G + + + L MY+KC + DA VFE KD V
Sbjct: 351 SGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIV 409
Query: 185 LWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAII 244
W S+I G+ +NG+ +AL + +M +++V + + S SAC +L + + G SLHA
Sbjct: 410 AWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYS 469
Query: 245 VKFGF--EYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLE 302
VK GF +G AL D Y+K GD SA +F + +N ++++A++ GY +
Sbjct: 470 VKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEE-KNTITWSAMIGGYGKQGDTI 528
Query: 303 KALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVK-FNFDRDPFVSSAL 361
+L F ++ +PNE TF+S++ AC + + G + K +NF + +
Sbjct: 529 GSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCM 588
Query: 362 VDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDR---GLK 418
VDM + G + ++ + +++ D G F HG G ++ E+V + L
Sbjct: 589 VDMLARAGELEQALDIIEKMPIQPDV---RCFGAFL-HGCGMHSRFDLGEIVIKKMLDLH 644
Query: 419 PNAVTFVNLL 428
P+ ++ L+
Sbjct: 645 PDDASYYVLV 654
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 348 bits (892), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 338/594 (56%), Gaps = 18/594 (3%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + ++L++ A K G+Q+H +I+GG ++ + L+++Y+KC ++ A + F
Sbjct: 100 DGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAF 159
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREA--LDTFCQMRAE-----GETASQFALSSVLQAC 127
+S+ N VSW A+I GF + + A L +M+A G A L C
Sbjct: 160 KEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFC 219
Query: 128 ASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP-CKDEVLW 186
L QVH V+K G E+ + + + Y+ CG VSDA +VF+ + KD + W
Sbjct: 220 NLLK------QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISW 273
Query: 187 TSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVK 246
SMI G+ K+ E A + +M V D + LSAC+ + FGKSLH +++K
Sbjct: 274 NSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIK 333
Query: 247 FGFEYETFIGNALTDLYSK--SGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKA 304
G E T NAL +Y + +G M A ++F+S ++++S+ +I+ G+ + E A
Sbjct: 334 KGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKS-KDLISWNSIITGFAQKGLSEDA 392
Query: 305 LNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDM 364
+ F LR+S I+ +++ FS+L+++C++ A L+ G +H K F + FV S+L+ M
Sbjct: 393 VKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVM 452
Query: 365 YGKCGLFDHSIQLFDEIENPNDT-AWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVT 423
Y KCG+ + + + F +I + + T AWN ++ +AQHGLG+ +++ F++M ++ +K + VT
Sbjct: 453 YSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVT 512
Query: 424 FVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
F +L CSH G++++GL M+ +Y + PR EHY +DLLGRAG + + ++ I SM
Sbjct: 513 FTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESM 572
Query: 484 PFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVR 543
P P +FLG C+ G+ E A A L+++EPE+ +V LS++Y+ ++WE+
Sbjct: 573 PLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKA 632
Query: 544 CLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIK 597
++KM+++ +KK+PG+SW++I N+ F ED S+P ++IY + L +++
Sbjct: 633 SVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 216 bits (551), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 241/480 (50%), Gaps = 28/480 (5%)
Query: 39 HAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRF 98
H I+ G + +++N +L+ Y K G L YA LFD M KR+ VSW MI+G+ +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 99 REALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNL 158
+A F M+ G ++ S +L+ AS+ G QVH LV+K G+ C +++GS+L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 159 TDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKA-----LIAYKKMVTDN 213
DMY+KC V DA + F+E+ + V W ++I G+V+ + + A L+ K VT +
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 214 --------VFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSK 265
+D + C+ L K +HA ++K G ++E I NA+ Y+
Sbjct: 203 AGTFAPLLTLLDDPMFCNLL------------KQVHAKVLKLGLQHEITICNAMISSYAD 250
Query: 266 SGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSS 325
G + A VF G ++++S+ +++ G+ + + E A FI ++ +E + +T++
Sbjct: 251 CGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTG 310
Query: 326 LIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGK--CGLFDHSIQLFDEIEN 383
L+ AC+ + G LHG V+K ++ ++AL+ MY + G + ++ LF+ +++
Sbjct: 311 LLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKS 370
Query: 384 PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNY 443
+ +WN+++ FAQ GL +A++ F+ + +K + F LL+ CS ++ G
Sbjct: 371 KDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG-QQ 429
Query: 444 FYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHG 503
+++ G + E + +I + + G ++ + + + W + + HG
Sbjct: 430 IHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 149/297 (50%), Gaps = 5/297 (1%)
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGN 198
HC +K G ++++ + + D Y K G + A +F+EMP +D V W +MI GY G
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 199 FEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNA 258
E A + M +D + L ++K F G+ +H +++K G+E ++G++
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 259 LTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKA--LNAFIDLRNSGI 316
L D+Y+K + A F+ S N VS+ A++ G+V++ ++ A L ++++ + +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISE-PNSVSWNALIAGFVQVRDIKTAFWLLGLMEMK-AAV 199
Query: 317 EPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQ 376
+ TF+ L+ + +H +V+K + + +A++ Y CG + +
Sbjct: 200 TMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKR 259
Query: 377 LFDEIENPND-TAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
+FD + D +WN+++ F++H L +A E F +M ++ + T+ LL CS
Sbjct: 260 VFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 346 bits (888), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 197/579 (34%), Positives = 326/579 (56%), Gaps = 5/579 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ + +++ CA+ L + +H Q+ R L N LL +YSKCG+L + ++F
Sbjct: 201 DAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIF 260
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
++++K+N VSWTAMI+ + R +AL +F +M G + L SVL +C +G I+
Sbjct: 261 EKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIR 320
Query: 135 FGVQVHCLVVKSGFGCEL-FLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
G VH V+ L L ++Y++CG++SD V + ++ V W S+I Y
Sbjct: 321 EGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLY 380
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
G +AL +++MVT + D L S++SAC GK +H +++ E
Sbjct: 381 AHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE- 439
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
F+ N+L D+YSKSG + SAS VF R++V++ +++ G+ + +A++ F + +
Sbjct: 440 FVQNSLIDMYSKSGSVDSASTVFNQIKH-RSVVTWNSMLCGFSQNGNSVEAISLFDYMYH 498
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
S +E NE TF ++I+AC++ LE G +H +++ +D F +AL+DMY KCG +
Sbjct: 499 SYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNA 557
Query: 374 SIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSH 433
+ +F + + + +W++++ + HG +AI TFN+MV+ G KPN V F+N+L C H
Sbjct: 558 AETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGH 617
Query: 434 AGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWC 493
+G VE+G Y++++ K +GV P EH+ C IDLL R+G LKE I MPF A W
Sbjct: 618 SGSVEEG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWG 676
Query: 494 SFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGN 553
S + C+ H + K L + +++G + LLSNIYA+E +WE+ R LR ++ N
Sbjct: 677 SLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSN 736
Query: 554 MKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSL 592
+KK+PGYS ++I + FG + + + EIY L +L
Sbjct: 737 LKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 244/465 (52%), Gaps = 8/465 (1%)
Query: 22 LIQTCAQAKE-LSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKR 80
+++ CA ++E LS G ++H ++I+GG + LL +Y + G L A K+FD M R
Sbjct: 106 VLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVR 165
Query: 81 NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVH 140
++V+W+ +++ + +AL F M +G + SV++ CA LG ++ VH
Sbjct: 166 DLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVH 225
Query: 141 CLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFE 200
+ + F + L ++L MYSKCG++ + ++FE++ K+ V WT+MI Y + E
Sbjct: 226 GQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSE 285
Query: 201 KALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFE--YETFIGNA 258
KAL ++ +M+ + + L S LS+C + GKS+H V+ + YE+ + A
Sbjct: 286 KALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYES-LSLA 344
Query: 259 LTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEP 318
L +LY++ G + V + S RNIV++ +++ Y + +AL F + I+P
Sbjct: 345 LVELYAECGKLSDCETVLRVVSD-RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKP 403
Query: 319 NEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLF 378
+ FT +S I AC N + G +HG V++ + D FV ++L+DMY K G D + +F
Sbjct: 404 DAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVF 462
Query: 379 DEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVE 438
++I++ + WN+++ F+Q+G AI F+ M L+ N VTF+ +++ CS G +E
Sbjct: 463 NQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLE 522
Query: 439 DGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
G + + I + +ID+ + G L E +M
Sbjct: 523 KGKWVHHKL--IISGLKDLFTDTALIDMYAKCGDLNAAETVFRAM 565
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 247/499 (49%), Gaps = 28/499 (5%)
Query: 22 LIQTCAQAKELSKGKQLHAQLI-----RGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDR 76
L ++C+ + +S QLHA L+ R LP T L+ Y+ G D + +F+
Sbjct: 7 LFRSCSSLRLVS---QLHAHLLVTGRLRRDPLPVT----KLIESYAFMGSPDSSRLVFEA 59
Query: 77 MSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACA-SLGSIQF 135
+ + +I A+D + ++ +E S+F SVL+ACA S +
Sbjct: 60 FPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSV 119
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVK 195
G +VH ++K G + + ++L MY + G +SDA KVF+ MP +D V W++++ ++
Sbjct: 120 GGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLE 179
Query: 196 NGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFI 255
NG KAL +K MV D V D + S + C L +S+H I + F+ + +
Sbjct: 180 NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETL 239
Query: 256 GNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSG 315
N+L +YSK GD++S+ +F+ + +N VS+TA++ Y + EKAL +F ++ SG
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAK-KNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG 298
Query: 316 IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRD-PFVSSALVDMYGKCGLFDHS 374
IEPN T S++ +C + G +HG V+ D + +S ALV++Y +CG
Sbjct: 299 IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDC 358
Query: 375 IQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHA 434
+ + + N AWN+L+ ++A G+ A+ F +MV + +KP+A T + + C +A
Sbjct: 359 ETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENA 418
Query: 435 GMVEDGLNYFYSMDKIYGVMPR-----EEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTA 489
G+V G +I+G + R E N +ID+ ++G + N + +
Sbjct: 419 GLVPLG-------KQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHR-SV 470
Query: 490 FGWCSFLGACKTHGDKERA 508
W S L +G+ A
Sbjct: 471 VTWNSMLCGFSQNGNSVEA 489
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 201/586 (34%), Positives = 321/586 (54%), Gaps = 23/586 (3%)
Query: 120 LSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTD--MYSKCGEVSDACKVFEE 177
+ +++Q C S I+ Q+ + +G FL S L + S G++S A ++F
Sbjct: 6 METMIQKCVSFSQIK---QLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRY 62
Query: 178 MPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVF------IDQHVLCSTLSACTAL 231
+P W ++I G+ + + A Y+ M+ + +D TL AC
Sbjct: 63 IPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARA 122
Query: 232 KAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAI 291
S LH I + G ++ + L D YSK+GD++SA +F + R++ S+ A+
Sbjct: 123 LCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFD-EMPVRDVASWNAL 181
Query: 292 VDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHG-SLLHGQVVKFN 350
+ G V ++ +A+ + + GI +E T + + AC++ ++ G ++ HG
Sbjct: 182 IAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS---- 237
Query: 351 FDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDT-AWNTLVGVFAQHGLGRNAIETF 409
+ + VS+A +DMY KCG D + Q+F++ WNT++ FA HG A+E F
Sbjct: 238 -NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIF 296
Query: 410 NEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGR 469
+++ D G+KP+ V+++ L C HAG+VE GL+ F +M GV +HY C++DLL R
Sbjct: 297 DKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNM-ACKGVERNMKHYGCVVDLLSR 355
Query: 470 AGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLL 529
AG+L+E D I SM P W S LGA + + D E A++A+ ++ ++ N G VLL
Sbjct: 356 AGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLL 415
Query: 530 SNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKL 589
SN+YA + +W+DV +R + +KK+PG S+++ H F D SH + +EIYEK+
Sbjct: 416 SNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKI 475
Query: 590 DSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLV---SPIGKPIIVK 646
D + +I+ GYV QT VL ++ + KE L HSE++AVAY L++ + P+ V
Sbjct: 476 DEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVI 535
Query: 647 KNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
NLR+C DCH FK+ISK+ +R IIVRD RFH F +GSCSC D+W
Sbjct: 536 NNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 179/383 (46%), Gaps = 18/383 (4%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLN--LYSKCGELDYAIKLFDRMSK 79
+IQ C S+ KQL + + G +FL + LL S G+L +A+++F + K
Sbjct: 9 MIQKCVS---FSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPK 65
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET------ASQFALSSVLQACASLGSI 133
W A+I GF S A + M + + S L+ACA
Sbjct: 66 PLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCS 125
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
Q+HC + + G + L + L D YSK G++ A K+F+EMP +D W ++I G
Sbjct: 126 SAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGL 185
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
V +A+ YK+M T+ + + + + L AC+ L G+++ G+ +
Sbjct: 186 VSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIF-----HGYSNDN 240
Query: 254 FI-GNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR 312
I NA D+YSK G + A VF+ +G +++V++ ++ G+ + +AL F L
Sbjct: 241 VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLE 300
Query: 313 NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
++GI+P++ ++ + + AC + +E+G + + +R+ +VD+ + G
Sbjct: 301 DNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLR 360
Query: 373 HSIQLFDEIEN-PNDTAWNTLVG 394
+ + + P+ W +L+G
Sbjct: 361 EAHDIICSMSMIPDPVLWQSLLG 383
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 151/315 (47%), Gaps = 8/315 (2%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM 82
++ CA+A S QLH Q+ R G + L LL+ YSK G+L A KLFD M R++
Sbjct: 116 LKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDV 175
Query: 83 VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCL 142
SW A+I G R EA++ + +M EG S+ + + L AC+ LG ++ G +
Sbjct: 176 ASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIF-- 233
Query: 143 VVKSGFGCELFLGSNLT-DMYSKCGEVSDACKVFEEMPCKDEVL-WTSMIDGYVKNGNFE 200
G+ + + SN DMYSKCG V A +VFE+ K V+ W +MI G+ +G
Sbjct: 234 ---HGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAH 290
Query: 201 KALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALT 260
+AL + K+ + + D + L+AC +G S+ + G E +
Sbjct: 291 RALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVV 350
Query: 261 DLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNE 320
DL S++G + A ++ S S + V + +++ +E A A +++ G+ N+
Sbjct: 351 DLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVN-ND 409
Query: 321 FTFSSLIKACANQAK 335
F L A Q +
Sbjct: 410 GDFVLLSNVYAAQGR 424
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 202/658 (30%), Positives = 347/658 (52%), Gaps = 19/658 (2%)
Query: 35 GKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFR 94
GK +H+ +I G L L++ YS+ +++ A+++ + ++++ WT++++GF R
Sbjct: 243 GKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVR 302
Query: 95 SLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFL 154
+LR +EA+ TF +MR+ G + F S++L C+++ S+ FG Q+H +K GF +
Sbjct: 303 NLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV 362
Query: 155 GSNLTDMYSKCGEVS-DACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDN 213
G+ L DMY KC +A +VF M + V WT++I G V +G + +MV
Sbjct: 363 GNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422
Query: 214 VFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSAS 273
V + L L AC+ L+ +HA +++ + E +GN+L D Y+ S + A
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW 482
Query: 274 NVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQ 333
NV +S R+ +++T++V + E+ + E AL+ + GI ++ + I A AN
Sbjct: 483 NVIRSMKR-RDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANL 541
Query: 334 AKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLV 393
LE G LH VK F V ++LVDMY KCG + + ++F+EI P+ +WN LV
Sbjct: 542 GALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLV 601
Query: 394 GVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGV 453
A +G +A+ F EM + +P++VTF+ LL CS+ + + GL YF M KIY +
Sbjct: 602 SGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNI 661
Query: 454 MPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAY 513
P+ EHY ++ +LGRAG+L+E + +M +P A + + L AC+ G+ + A
Sbjct: 662 EPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMAN 721
Query: 514 KLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFG 573
K + L P + ++LL+++Y + + E + R ++ + + K G S V++ + H F
Sbjct: 722 KGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFV 781
Query: 574 VEDWSHPRKKE-IYEKLDSLLDQIKIVG--YVPQTESVLIEMDDTLKEKLLHNHSERIAV 630
ED + K IY +++S+ ++IK G Y + HS + AV
Sbjct: 782 SEDVTRVDKTNGIYAEIESIKEEIKRFGSPYRGNENASF--------------HSAKQAV 827
Query: 631 AYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSC 688
Y + + P+ V KN +C DCH ++++ ++ I VRD ++ H F NG CSC
Sbjct: 828 VYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 223/399 (55%), Gaps = 3/399 (0%)
Query: 35 GKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFR 94
G +H +I+ G L L N+LL+LY K + A KLFD MS R + +WT MI+ F +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 95 SLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFL 154
S F AL F +M A G ++F SSV+++CA L I +G +VH V+K+GF +
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 155 GSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNV 214
GS+L+D+YSKCG+ +AC++F + D + WT MI V + +AL Y +MV V
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
Query: 215 FIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASN 274
++ L A + L FGK++H+ I+ G + +L D YS+ M A
Sbjct: 222 PPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVR 280
Query: 275 VFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQA 334
V S SG +++ +T++V G+V + ++A+ F+++R+ G++PN FT+S+++ C+
Sbjct: 281 VLNS-SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVR 339
Query: 335 KLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD-HSIQLFDEIENPNDTAWNTLV 393
L+ G +H Q +K F+ V +ALVDMY KC + + ++F + +PN +W TL+
Sbjct: 340 SLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLI 399
Query: 394 GVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
HG ++ EMV R ++PN VT +L+ CS
Sbjct: 400 LGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 145/297 (48%), Gaps = 6/297 (2%)
Query: 236 FGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGY 295
G +H ++KFG + N L LY K+ + +A +F S R + ++T ++ +
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH-RTVFAWTVMISAF 99
Query: 296 VEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDP 355
+ + AL+ F ++ SG PNEFTFSS++++CA + +G +HG V+K F+ +
Sbjct: 100 TKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS 159
Query: 356 FVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDR 415
V S+L D+Y KCG F + +LF ++N + +W ++ R A++ ++EMV
Sbjct: 160 VVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKA 219
Query: 416 GLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKE 475
G+ PN TFV LL S G+ E G +S + G+ ++D + K+++
Sbjct: 220 GVPPNEFTFVKLLGASSFLGL-EFG-KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMED 277
Query: 476 VEDFINSMPFEPTAFGWCSFL-GACKTHGDKER-AKLAAYKLMKLEPENSGAHVLLS 530
+NS E F W S + G + KE + + L+P N +LS
Sbjct: 278 AVRVLNSSG-EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS 333
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D ++ I A L GK LH ++ G + N L+++YSKCG L+ A K+F
Sbjct: 527 DQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVF 586
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ ++ ++VSW +++G + AL F +MR + +L AC++
Sbjct: 587 EEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTD 646
Query: 135 FGVQVHCLVVKSGFGCELFLGS--NLTDMYSKCGEVSDACKVFEEMPCKDEVL 185
G++ + V+K + E + +L + + G + +A V E M K +
Sbjct: 647 LGLE-YFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAM 698
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 338 bits (868), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 313/584 (53%), Gaps = 54/584 (9%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
L+++CA+ ++ +G+ LHAQ+++ G F L+++Y K ++ A+K+ D M +R
Sbjct: 37 LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERG 96
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
+ S A ++G + R+A F R G + ++SVL C G I+ G+Q+HC
Sbjct: 97 IASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHC 153
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
L +KSGF E+++G++L MYS+CGE A ++FE++P K V + + I G ++NG
Sbjct: 154 LAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNL 213
Query: 202 ALIAYKKM-------VTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+ M D F++ ++AC +L +G+ LH +++K F++ET
Sbjct: 214 VPSVFNLMRKFSSEEPNDVTFVN------AITACASLLNLQYGRQLHGLVMKKEFQFETM 267
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+G AL D+YSK SA VF RN++S+ +++ G + Q E A+ F L +
Sbjct: 268 VGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSE 327
Query: 315 GIEPNEFTFSSLIK-----------------------------------ACANQAKLEHG 339
G++P+ T++SLI AC++ L++G
Sbjct: 328 GLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNG 387
Query: 340 SLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE-NPNDTA-WNTLVGVFA 397
+HG V+K +RD FV ++L+DMY KCGL + ++FD E P D WN ++ +
Sbjct: 388 KEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYG 447
Query: 398 QHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPRE 457
+HG +AIE F + + ++P+ TF +L CSH G VE G F M + YG P
Sbjct: 448 KHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPST 507
Query: 458 EHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMK 517
EH C+IDLLGR+G+L+E ++ I+ M ++ S LG+C+ H D + AA KL +
Sbjct: 508 EHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAE 566
Query: 518 LEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYS 561
LEPEN V+LS+IYA +WEDV +R++I + KLPG S
Sbjct: 567 LEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 185/356 (51%), Gaps = 10/356 (2%)
Query: 114 TASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACK 173
+ ++F +L++CA LG + G +H VVK+GF ++F + L MY K +V+DA K
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 174 VFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKA 233
V +EMP + + + G ++NG A + ++ + S L C ++
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG 147
Query: 234 FSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVD 293
G LH + +K GFE E ++G +L +YS+ G+ V A+ +F+ +++V++ A +
Sbjct: 148 ---GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPH-KSVVTYNAFIS 203
Query: 294 GYVEMDQLEKALNAFIDLRN-SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFD 352
G +E + + F +R S EPN+ TF + I ACA+ L++G LHG V+K F
Sbjct: 204 GLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQ 263
Query: 353 RDPFVSSALVDMYGKCGLFDHSIQLFDEIENP-NDTAWNTLVGVFAQHGLGRNAIETFNE 411
+ V +AL+DMY KC + + +F E+++ N +WN+++ +G A+E F +
Sbjct: 264 FETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEK 323
Query: 412 MVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLL 467
+ GLKP++ T+ +L+ G S G V + +F M + V C+ LL
Sbjct: 324 LDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV----PSLKCLTSLL 375
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 82/165 (49%), Gaps = 3/165 (1%)
Query: 17 KAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDR 76
K + L+ C+ L GK++H +I+ F+ L+++Y KCG +A ++FDR
Sbjct: 369 KCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDR 428
Query: 77 MS--KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
++ V W MI+G+ + A++ F +R E S ++VL AC+ G+++
Sbjct: 429 FEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVE 488
Query: 135 FGVQVHCLVVKS-GFGCELFLGSNLTDMYSKCGEVSDACKVFEEM 178
G Q+ L+ + G+ + D+ + G + +A +V ++M
Sbjct: 489 KGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 338 bits (867), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 323/580 (55%), Gaps = 19/580 (3%)
Query: 123 VLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDM--YSKCGEVSDACKVFEEM-- 178
+LQ C S+ ++ ++H V+ +G + ++L S G +S A +F+
Sbjct: 11 MLQGCNSMKKLR---KIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 179 -PCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVF-IDQHVLCSTLSACTALKAFSF 236
P + W +I G+ + + +++ Y +M+ +V D L +C +K+
Sbjct: 68 DPSTSD--WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPK 125
Query: 237 GKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYV 296
+H +++ GF + + +L YS +G + AS VF + R++VS+ ++ +
Sbjct: 126 CLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFD-EMPVRDLVSWNVMICCFS 184
Query: 297 EMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPF 356
+ +AL+ + + N G+ + +T +L+ +CA+ + L G +LH + F
Sbjct: 185 HVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVF 244
Query: 357 VSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRG 416
VS+AL+DMY KCG +++I +F+ + + WN+++ + HG G AI F +MV G
Sbjct: 245 VSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG 304
Query: 417 LKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEV 476
++PNA+TF+ LL GCSH G+V++G+ +F M + + P +HY C++DL GRAG+L+
Sbjct: 305 VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS 364
Query: 477 EDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKE 536
+ I + W + LG+CK H + E ++A KL++LE N+G +VL+++IY+
Sbjct: 365 LEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAA 424
Query: 537 RQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQI 596
+ +RK+IR +++ +PG+SW++IG++ H F V+D HP IY +L ++++
Sbjct: 425 NDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRA 484
Query: 597 KIVGYVPQTESVLIEMDDTLKEKLL----HNHSERIAVAYSLLVSPIGKPIIVKKNLRVC 652
+ GY P+ + TL ++ L +HSE++A+AY L+ + G + + KNLRVC
Sbjct: 485 ILAGYKPEDSN---RTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVC 541
Query: 653 SDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
DCHS KY+SK R IIVRD RFHHF++G CSC DYW
Sbjct: 542 RDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 192/386 (49%), Gaps = 12/386 (3%)
Query: 16 SKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNL--YSKCGELDYAIKL 73
++ + +++Q C K+L +++H+ +I G + NHLL S G L +A L
Sbjct: 5 ARVIVRMLQGCNSMKKL---RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLL 61
Query: 74 FDRM-SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQ-FALSSVLQACASLG 131
FD S + W +I GF S ++ + +M + F + L++C +
Sbjct: 62 FDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIK 121
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMID 191
SI +++H V++SGF + + ++L YS G V A KVF+EMP +D V W MI
Sbjct: 122 SIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMIC 181
Query: 192 GYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEY 251
+ G +AL YK+M + V D + L + LS+C + A + G LH I E
Sbjct: 182 CFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCES 241
Query: 252 ETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL 311
F+ NAL D+Y+K G + +A VF R+++++ +++ GY +A++ F +
Sbjct: 242 CVFVSNALIDMYAKCGSLENAIGVFNGMRK-RDVLTWNSMIIGYGVHGHGVEAISFFRKM 300
Query: 312 RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCG 369
SG+ PN TF L+ C++Q ++ G + H +++ F P V +VD+YG+ G
Sbjct: 301 VASGVRPNAITFLGLLLGCSHQGLVKEG-VEHFEIMSSQFHLTPNVKHYGCMVDLYGRAG 359
Query: 370 LFDHSIQLFDEIENPNDTA-WNTLVG 394
++S+++ D W TL+G
Sbjct: 360 QLENSLEMIYASSCHEDPVLWRTLLG 385
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/551 (33%), Positives = 303/551 (54%), Gaps = 8/551 (1%)
Query: 17 KAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGE-LDYAIKLFD 75
K A L+QTC + G Q HA +++ G + N LL+LY K G + ++FD
Sbjct: 62 KLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFD 121
Query: 76 RMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQF 135
++ +SWT+M++G+ +AL+ F +M + G A++F LSS ++AC+ LG ++
Sbjct: 122 GRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRL 181
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVK 195
G H +V+ GF F+ S L +Y E DA +VF+EMP D + WT+++ + K
Sbjct: 182 GRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 196 NGNFEKALIAYKKMVTDNVFI-DQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
N +E+AL + M + D + L+AC L+ GK +H ++ G
Sbjct: 242 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV 301
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+ ++L D+Y K G + A VF S +N VS++A++ GY + + EKA+ F ++
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSK-KNSVSWSALLGGYCQNGEHEKAIEIFREME-- 358
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
E + + F +++KACA A + G +HGQ V+ + V SAL+D+YGK G D +
Sbjct: 359 --EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSA 416
Query: 375 IQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHA 434
+++ ++ N WN ++ AQ+G G A+ FN+MV +G+KP+ ++F+ +L C H
Sbjct: 417 SRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHT 476
Query: 435 GMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCS 494
GMV++G NYF M K YG+ P EHY+C+IDLLGRAG +E E+ + A W
Sbjct: 477 GMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGV 536
Query: 495 FLGACKTHGDKER-AKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGN 553
LG C + D R A+ A ++M+LEP+ ++VLLSN+Y + D +RK++
Sbjct: 537 LLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRG 596
Query: 554 MKKLPGYSWVD 564
+ K G SW+D
Sbjct: 597 VAKTVGQSWID 607
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 167/339 (49%), Gaps = 7/339 (2%)
Query: 6 LFRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCG 65
+ R + + D ++ C + L +GK++H +LI G + + LL++Y KCG
Sbjct: 255 MHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCG 314
Query: 66 ELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQ 125
+ A ++F+ MSK+N VSW+A++ G+ ++ +A++ F +M E + +VL+
Sbjct: 315 SVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLK 370
Query: 126 ACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVL 185
ACA L +++ G ++H V+ G + + S L D+Y K G + A +V+ +M ++ +
Sbjct: 371 ACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMIT 430
Query: 186 WTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIV 245
W +M+ +NG E+A+ + MV + D + L+AC G++ ++
Sbjct: 431 WNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMA 490
Query: 246 K-FGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKA 304
K +G + T + + DL ++G A N+ + + CRN S ++ G +
Sbjct: 491 KSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLER-AECRNDASLWGVLLGPCAANADASR 549
Query: 305 LNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLH 343
+ I R +EP ++ S ++ + +A HG L+
Sbjct: 550 VAERIAKRMMELEP-KYHMSYVLLSNMYKAIGRHGDALN 587
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 150/315 (47%), Gaps = 3/315 (0%)
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
K G +A+ + + + S L C + +F G HA +VK G E +
Sbjct: 38 KLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN 97
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+GN+L LY K G + + ++ +S+T+++ GYV + KAL F+++ +
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF 157
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
G++ NEFT SS +KAC+ ++ G HG V+ F+ + F+SS L +YG +
Sbjct: 158 GLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDA 217
Query: 375 IQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEM-VDRGLKPNAVTFVNLLKGCSH 433
++FDE+ P+ W ++ F+++ L A+ F M +GL P+ TF +L C +
Sbjct: 218 RRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGN 277
Query: 434 AGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWC 493
++ G + G+ + ++D+ G+ G ++E N M + + W
Sbjct: 278 LRRLKQG-KEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWS 335
Query: 494 SFLGACKTHGDKERA 508
+ LG +G+ E+A
Sbjct: 336 ALLGGYCQNGEHEKA 350
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 190/579 (32%), Positives = 310/579 (53%), Gaps = 3/579 (0%)
Query: 16 SKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFD 75
S + + C+Q++ G+Q+H +++ G ++ LL++YSKCG + A +F
Sbjct: 272 STSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFS 331
Query: 76 RMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQF 135
+ + + W AM+ + + ALD F MR + F LS+V+ C+ LG +
Sbjct: 332 CVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNY 391
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVK 195
G VH + K + S L +YSKCG DA VF+ M KD V W S+I G K
Sbjct: 392 GKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCK 451
Query: 196 NGNFEKALIAYKKMVTDNVFI--DQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
NG F++AL + M D+ + D ++ S +AC L+A FG +H ++K G
Sbjct: 452 NGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNV 511
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
F+G++L DLYSK G A VF S S N+V++ +++ Y + E +++ F + +
Sbjct: 512 FVGSSLIDLYSKCGLPEMALKVFTSMS-TENMVAWNSMISCYSRNNLPELSIDLFNLMLS 570
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
GI P+ + +S++ A ++ A L G LHG ++ D + +AL+DMY KCG +
Sbjct: 571 QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKY 630
Query: 374 SIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSH 433
+ +F ++++ + WN ++ + HG A+ F+EM G P+ VTF++L+ C+H
Sbjct: 631 AENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNH 690
Query: 434 AGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWC 493
+G VE+G N F M + YG+ P EHY ++DLLGRAG L+E FI +MP E + W
Sbjct: 691 SGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWL 750
Query: 494 SFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGN 553
L A +TH + E L+A KL+++EPE +V L N+Y + + L ++++
Sbjct: 751 CLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKG 810
Query: 554 MKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSL 592
+ K PG SW+++ + T+VF S P K EI+ L+ L
Sbjct: 811 LHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRL 849
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 144/505 (28%), Positives = 254/505 (50%), Gaps = 9/505 (1%)
Query: 34 KGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS-KRNMVSWTAMITGF 92
+GKQ+H ++R +FL L+++Y K G A ++F + K N+V W MI GF
Sbjct: 188 EGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGF 247
Query: 93 FRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCEL 152
S +LD + + + + L AC+ + FG Q+HC VVK G +
Sbjct: 248 GGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDP 307
Query: 153 FLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTD 212
++ ++L MYSKCG V +A VF + K +W +M+ Y +N AL + M
Sbjct: 308 YVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQK 367
Query: 213 NVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSA 272
+V D L + +S C+ L +++GKS+HA + K + + I +AL LYSK G A
Sbjct: 368 SVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDA 427
Query: 273 SNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR--NSGIEPNEFTFSSLIKAC 330
VF+S +++V++ +++ G + + ++AL F D++ + ++P+ +S+ AC
Sbjct: 428 YLVFKSMEE-KDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNAC 486
Query: 331 ANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWN 390
A L G +HG ++K + FV S+L+D+Y KCGL + ++++F + N AWN
Sbjct: 487 AGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWN 546
Query: 391 TLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKI 450
+++ ++++ L +I+ FN M+ +G+ P++V+ ++L S + G +
Sbjct: 547 SMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKG-KSLHGYTLR 605
Query: 451 YGVMPREEHY-NCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAK 509
G+ P + H N +ID+ + G K E+ M + + W + +HGD A
Sbjct: 606 LGI-PSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK-SLITWNLMIYGYGSHGDCITA- 662
Query: 510 LAAYKLMKLEPENSGAHVLLSNIYA 534
L+ + MK E+ LS I A
Sbjct: 663 LSLFDEMKKAGESPDDVTFLSLISA 687
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 247/479 (51%), Gaps = 37/479 (7%)
Query: 2 ASRNLFRF-RHK--LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLL 58
++ +LF F R K L DS ++ +I C+ + GK +HA+L + + + + LL
Sbjct: 356 SALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALL 415
Query: 59 NLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQF 118
LYSKCG A +F M +++MV+W ++I+G ++ +F+EAL F M+ + ++
Sbjct: 416 TLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPD 475
Query: 119 A--LSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFE 176
+ ++SV ACA L +++FG+QVH ++K+G +F+GS+L D+YSKCG A KVF
Sbjct: 476 SDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFT 535
Query: 177 EMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSF 236
M ++ V W SMI Y +N E ++ + M++ +F D + S L A ++ +
Sbjct: 536 SMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLK 595
Query: 237 GKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYV 296
GKSLH ++ G +T + NAL D+Y K G A N+F+ ++++++ ++ GY
Sbjct: 596 GKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQH-KSLITWNLMIYGYG 654
Query: 297 EMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPF 356
AL+ F +++ +G P++ TF SLI AC + +E G + + +K ++ +P
Sbjct: 655 SHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIF-EFMKQDYGIEPN 713
Query: 357 VS--SALVDMYGKCGLFDHSIQLFDEIENPNDTA-W-----------NTLVGVFAQHGL- 401
+ + +VD+ G+ GL + + + D++ W N +G+ + L
Sbjct: 714 MEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLL 773
Query: 402 ------GRNAIETFNEMVDRGLKPNAVTFVNLLK--------GCSHAGMVEDGLNYFYS 446
G ++ N ++ GLK A + L+K GCS V D N F+S
Sbjct: 774 RMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIE-VSDRTNVFFS 831
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 240/508 (47%), Gaps = 16/508 (3%)
Query: 21 QLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFD----- 75
L++ C+ LS GK +H ++ G F+ L+N+Y KCG LDYA+++FD
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQS 124
Query: 76 --RMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSI 133
+S R++ W +MI G+F+ RF+E + F +M G F+LS V+ G+
Sbjct: 125 QSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNF 184
Query: 134 --QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDE-VLWTSMI 190
+ G Q+H ++++ + FL + L DMY K G DA +VF E+ K VLW MI
Sbjct: 185 RREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI 244
Query: 191 DGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFE 250
G+ +G E +L Y ++V + L AC+ + FG+ +H +VK G
Sbjct: 245 VGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLH 304
Query: 251 YETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID 310
+ ++ +L +YSK G + A VF R + + A+V Y E D AL+ F
Sbjct: 305 NDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKR-LEIWNAMVAAYAENDYGYSALDLFGF 363
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGL 370
+R + P+ FT S++I C+ +G +H ++ K + SAL+ +Y KCG
Sbjct: 364 MRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGC 423
Query: 371 FDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMV--DRGLKPNAVTFVNLL 428
+ +F +E + AW +L+ ++G + A++ F +M D LKP++ ++
Sbjct: 424 DPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVT 483
Query: 429 KGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPT 488
C+ + GL SM K G++ + +IDL + G + SM E
Sbjct: 484 NACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-N 541
Query: 489 AFGWCSFLGACKTHGDKERAKLAAYKLM 516
W S + +C + + + + LM
Sbjct: 542 MVAWNSMI-SCYSRNNLPELSIDLFNLM 568
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 169/335 (50%), Gaps = 9/335 (2%)
Query: 115 ASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKV 174
S F S+L+AC++L ++ +G +H VV G+ + F+ ++L +MY KCG + A +V
Sbjct: 58 TSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQV 117
Query: 175 FE-------EMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSA 227
F+ + +D +W SMIDGY K F++ + +++M+ V D L +S
Sbjct: 118 FDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSV 177
Query: 228 CTALKAFSF--GKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNI 285
F GK +H +++ + ++F+ AL D+Y K G + A VF N+
Sbjct: 178 MCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNV 237
Query: 286 VSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQ 345
V + ++ G+ E +L+ ++ +N+ ++ +F+ + AC+ G +H
Sbjct: 238 VLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCD 297
Query: 346 VVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNA 405
VVK DP+V ++L+ MY KCG+ + +F + + WN +V +A++ G +A
Sbjct: 298 VVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSA 357
Query: 406 IETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG 440
++ F M + + P++ T N++ CS G+ G
Sbjct: 358 LDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYG 392
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 133/257 (51%), Gaps = 10/257 (3%)
Query: 188 SMIDGYVKNGNFEKALIAYKKMVTDNVF-IDQHVLCSTLSACTALKAFSFGKSLHAIIVK 246
S I ++ G + +AL Y K + F S L AC+AL S+GK++H +V
Sbjct: 29 SGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVV 88
Query: 247 FGFEYETFIGNALTDLYSKSGDMVSASNVF----QSDSG--CRNIVSFTAIVDGYVEMDQ 300
G+ Y+ FI +L ++Y K G + A VF QS SG R++ + +++DGY + +
Sbjct: 89 LGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRR 148
Query: 301 LEKALNAFIDLRNSGIEPNEFTFSSLIKACANQA--KLEHGSLLHGQVVKFNFDRDPFVS 358
++ + F + G+ P+ F+ S ++ + + E G +HG +++ + D D F+
Sbjct: 149 FKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLK 208
Query: 359 SALVDMYGKCGLFDHSIQLFDEIENPNDTA-WNTLVGVFAQHGLGRNAIETFNEMVDRGL 417
+AL+DMY K GL + ++F EIE+ ++ WN ++ F G+ ++++ + + +
Sbjct: 209 TALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSV 268
Query: 418 KPNAVTFVNLLKGCSHA 434
K + +F L CS +
Sbjct: 269 KLVSTSFTGALGACSQS 285
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 336 bits (862), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 189/555 (34%), Positives = 297/555 (53%), Gaps = 2/555 (0%)
Query: 55 NHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET 114
N LL+LY+KCG+L AIKLFD M R+++S + GF R+ +M G
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-G 152
Query: 115 ASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKV 174
L+ VL C + +H L + SG+ E+ +G+ L Y KCG V
Sbjct: 153 FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGV 212
Query: 175 FEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAF 234
F+ M ++ + T++I G ++N E L + M V + S L+AC+ +
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRI 272
Query: 235 SFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDG 294
G+ +HA++ K+G E E I +AL D+YSK G + A +F+S + VS T I+ G
Sbjct: 273 VEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDE-VSMTVILVG 331
Query: 295 YVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRD 354
+ E+A+ FI + +G+E + S+++ L G LH V+K F +
Sbjct: 332 LAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGN 391
Query: 355 PFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVD 414
FV++ L++MY KCG S +F + N +WN+++ FA+HG G A++ + EM
Sbjct: 392 TFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTT 451
Query: 415 RGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLK 474
+KP VTF++LL CSH G+++ G M +++G+ PR EHY CIID+LGRAG LK
Sbjct: 452 LEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLK 511
Query: 475 EVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYA 534
E + FI+S+P +P W + LGAC HGD E + AA +L + P++S AH+L++NIY+
Sbjct: 512 EAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYS 571
Query: 535 KERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLD 594
+W++ K ++ + K G S ++I ++TH F VED HP+ + IY+ L L
Sbjct: 572 SRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFP 631
Query: 595 QIKIVGYVPQTESVL 609
+ GY P +L
Sbjct: 632 VMVDEGYRPDKRFIL 646
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 188/389 (48%), Gaps = 5/389 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + ++ C + K +HA I G + N L+ Y KCG +F
Sbjct: 154 DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVF 213
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
D MS RN+++ TA+I+G + + L F MR + S L AC+ I
Sbjct: 214 DGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIV 273
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G Q+H L+ K G EL + S L DMYSKCG + DA +FE DEV T ++ G
Sbjct: 274 EGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLA 333
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+NG+ E+A+ + +M+ V ID +V+ + L + GK LH++++K F TF
Sbjct: 334 QNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+ N L ++YSK GD+ + VF+ RN VS+ +++ + AL + ++
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRRMPK-RNYVSWNSMIAAFARHGHGLAALKLYEEMTTL 452
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFD 372
++P + TF SL+ AC++ ++ G L ++ + + +P + ++DM G+ GL
Sbjct: 453 EVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVH-GIEPRTEHYTCIIDMLGRAGLLK 511
Query: 373 HSIQLFDEIE-NPNDTAWNTLVGVFAQHG 400
+ D + P+ W L+G + HG
Sbjct: 512 EAKSFIDSLPLKPDCKIWQALLGACSFHG 540
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 177/369 (47%), Gaps = 18/369 (4%)
Query: 152 LFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVT 211
L + ++L +Y+KCG++ DA K+F+EMP +D + + G+++N E + K+M+
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 212 DNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVS 271
F D L LS C + K +HA+ + G++ E +GN L Y K G VS
Sbjct: 150 SGGF-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS 208
Query: 272 ASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACA 331
VF S RN+++ TA++ G +E + E L F +R + PN T+ S + AC+
Sbjct: 209 GRGVFDGMSH-RNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACS 267
Query: 332 NQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNT 391
++ G +H + K+ + + + SAL+DMY KCG + + +F+ ++ +
Sbjct: 268 GSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTV 327
Query: 392 LVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIY 451
++ AQ+G AI+ F M+ G++ +A N++ +++ L + +
Sbjct: 328 ILVGLAQNGSEEEAIQFFIRMLQAGVEIDA----NVVSAVLGVSFIDNSLGLGKQLHSL- 382
Query: 452 GVMPREEHYNC-----IIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKE 506
V+ R+ N +I++ + G L + + MP + W S + A HG
Sbjct: 383 -VIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGH-- 438
Query: 507 RAKLAAYKL 515
LAA KL
Sbjct: 439 --GLAALKL 445
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ V+ ++ L GKQLH+ +I+ TF+ N L+N+YSKCG+L + +F
Sbjct: 356 DANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVF 415
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
RM KRN VSW +MI F R AL + +M + S+L AC+ +G I
Sbjct: 416 RRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLID 475
Query: 135 FG-------VQVHCLVVKS-GFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEV-L 185
G +VH + ++ + C + DM + G + +A + +P K + +
Sbjct: 476 KGRELLNEMKEVHGIEPRTEHYTC-------IIDMLGRAGLLKEAKSFIDSLPLKPDCKI 528
Query: 186 WTSMIDGYVKNGNFEKALIAYKKM 209
W +++ +G+ E A +++
Sbjct: 529 WQALLGACSFHGDTEVGEYAAEQL 552
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 335 bits (860), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 175/550 (31%), Positives = 312/550 (56%), Gaps = 6/550 (1%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS--K 79
L+ +QAK L+ +Q+HA++I G L + L N Y + LD+A F+R+ K
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 80 RNMVSWTAMITGFFRSLR--FREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
RN SW +++G+ +S + + L + +MR + F L ++AC LG ++ G+
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGI 129
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNG 197
+H L +K+G + ++ +L +MY++ G + A KVF+E+P ++ VLW ++ GY+K
Sbjct: 130 LIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS 189
Query: 198 NFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF-EYETFIG 256
+ + M + +D L + AC + A GK +H + ++ F + ++
Sbjct: 190 KDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQ 249
Query: 257 NALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI 316
++ D+Y K + +A +F++ S RN+V +T ++ G+ + ++ +A + F + I
Sbjct: 250 ASIIDMYVKCRLLDNARKLFET-SVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESI 308
Query: 317 EPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQ 376
PN+ T ++++ +C++ L HG +HG +++ + D ++ +DMY +CG +
Sbjct: 309 LPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMART 368
Query: 377 LFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGM 436
+FD + N +W++++ F +GL A++ F++M + + PN+VTFV+LL CSH+G
Sbjct: 369 VFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGN 428
Query: 437 VEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFL 496
V++G F SM + YGV+P EEHY C++DLLGRAG++ E + FI++MP +P A W + L
Sbjct: 429 VKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALL 488
Query: 497 GACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKK 556
AC+ H + + A A KL+ +EPE S +VLLSNIYA WE V C+R+ + +K
Sbjct: 489 SACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRK 548
Query: 557 LPGYSWVDIG 566
G S ++G
Sbjct: 549 HVGQSATEVG 558
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 193/388 (49%), Gaps = 4/388 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS + I+ C L G +H ++ G ++ L+ +Y++ G ++ A K+F
Sbjct: 108 DSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVF 167
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
D + RN V W ++ G+ + + E FC MR G L +++AC ++ + +
Sbjct: 168 DEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGK 227
Query: 135 FGVQVHCLVVKSGFGCEL-FLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
G VH + ++ F + +L +++ DMY KC + +A K+FE ++ V+WT++I G+
Sbjct: 228 VGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGF 287
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
K +A +++M+ +++ +Q L + L +C++L + GKS+H +++ G E +
Sbjct: 288 AKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDA 347
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
+ D+Y++ G++ A VF RN++S++++++ + E+AL+ F +++
Sbjct: 348 VNFTSFIDMYARCGNIQMARTVFDMMPE-RNVISWSSMINAFGINGLFEEALDCFHKMKS 406
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHG-SLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
+ PN TF SL+ AC++ ++ G + + + +VD+ G+ G
Sbjct: 407 QNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIG 466
Query: 373 HSIQLFDEIE-NPNDTAWNTLVGVFAQH 399
+ D + P +AW L+ H
Sbjct: 467 EAKSFIDNMPVKPMASAWGALLSACRIH 494
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/548 (33%), Positives = 305/548 (55%), Gaps = 6/548 (1%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
+++ CA + + GK +H+ + ++ L++ Y+KCGEL+ AIK+FD M KR+
Sbjct: 109 VLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRD 168
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMR-AEGETASQFALSSVLQACASLGSIQFGVQVH 140
MV+W AMI+GF + + F MR +G + + + + A G+++ G VH
Sbjct: 169 MVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVH 228
Query: 141 CLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFE 200
+ GF +L + + + D+Y+K + A +VF+ K+EV W++MI GYV+N +
Sbjct: 229 GYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIK 288
Query: 201 KA-LIAYKKMVTDNVFIDQHVLCS-TLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNA 258
+A + ++ +V DNV + V L C S G+ +H VK GF + + N
Sbjct: 289 EAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNT 348
Query: 259 LTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEP 318
+ Y+K G + A F S+ G ++++S+ +++ G V + E++ F ++R SGI P
Sbjct: 349 IISFYAKYGSLCDAFRQF-SEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRP 407
Query: 319 NEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLF 378
+ T ++ AC++ A L HGS HG V + + + +AL+DMY KCG D + ++F
Sbjct: 408 DITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVF 467
Query: 379 DEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVE 438
D + + +WNT++ F HGLG+ A+ FN M + G+ P+ VT + +L CSH+G+V+
Sbjct: 468 DTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVD 527
Query: 439 DGLNYFYSMDK-IYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLG 497
+G F SM + + V+PR +HYNC+ DLL RAG L E DF+N MPFEP + L
Sbjct: 528 EGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLS 587
Query: 498 ACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKL 557
AC T+ + E + K+ L E + + VLLSN Y+ +WED +R + + + K
Sbjct: 588 ACWTYKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKT 646
Query: 558 PGYSWVDI 565
PGYSWVD+
Sbjct: 647 PGYSWVDV 654
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 242/520 (46%), Gaps = 10/520 (1%)
Query: 21 QLIQTCAQAKELSKGKQLHAQLI-RGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS- 78
L++TC +++ L G+ +H L+ R L + + +L LY+ C E++ A +FD +
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 79 -KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
+ N ++W MI + + +ALD + +M G +++ VL+ACA L +I G
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNG 197
+H V S F ++++ + L D Y+KCGE+ A KVF+EMP +D V W +MI G+ +
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 198 NFEKALIAYKKM-VTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIG 256
+ + M D + + + A A GK++H + GF + +
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 257 NALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID-LRNSG 315
+ D+Y+KS ++ A VF D +N V+++A++ GYVE + +++A F L N
Sbjct: 244 TGILDVYAKSKCIIYARRVFDLDFK-KNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDN 302
Query: 316 IE-PNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
+ ++ CA L G +H VK F D V + ++ Y K G +
Sbjct: 303 VAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDA 362
Query: 375 IQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHA 434
+ F EI + ++N+L+ + + F+EM G++P+ T + +L CSH
Sbjct: 363 FRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHL 422
Query: 435 GMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCS 494
+ G + + ++G N ++D+ + GKL + ++M + W +
Sbjct: 423 AALGHG-SSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTM-HKRDIVSWNT 480
Query: 495 FLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYA 534
L HG + A L+ + M+ N LL+ + A
Sbjct: 481 MLFGFGIHGLGKEA-LSLFNSMQETGVNPDEVTLLAILSA 519
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 190/381 (49%), Gaps = 6/381 (1%)
Query: 18 AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM 77
+ + +A L +GK +H R G + +L++Y+K + YA ++FD
Sbjct: 207 TIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLD 266
Query: 78 SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETA--SQFALSSVLQACASLGSIQF 135
K+N V+W+AMI G+ + +EA + F QM A + A+ +L CA G +
Sbjct: 267 FKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSG 326
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVK 195
G VHC VK+GF +L + + + Y+K G + DA + F E+ KD + + S+I G V
Sbjct: 327 GRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVV 386
Query: 196 NGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFI 255
N E++ + +M T + D L L+AC+ L A G S H V G+ T I
Sbjct: 387 NCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSI 446
Query: 256 GNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSG 315
NAL D+Y+K G + A VF + R+IVS+ ++ G+ ++AL+ F ++ +G
Sbjct: 447 CNALMDMYTKCGKLDVAKRVFDTMHK-RDIVSWNTMLFGFGIHGLGKEALSLFNSMQETG 505
Query: 316 IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFDH 373
+ P+E T +++ AC++ ++ G L + + +F+ P + + + D+ + G D
Sbjct: 506 VNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDE 565
Query: 374 SIQLFDEIE-NPNDTAWNTLV 393
+ +++ P+ TL+
Sbjct: 566 AYDFVNKMPFEPDIRVLGTLL 586
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 8/186 (4%)
Query: 7 FRFRHKL------CDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNL 60
FR H++ D + ++ C+ L G H + G T + N L+++
Sbjct: 394 FRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDM 453
Query: 61 YSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFAL 120
Y+KCG+LD A ++FD M KR++VSW M+ GF +EAL F M+ G + L
Sbjct: 454 YTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTL 513
Query: 121 SSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLG--SNLTDMYSKCGEVSDACKVFEEM 178
++L AC+ G + G Q+ + + F + + +TD+ ++ G + +A +M
Sbjct: 514 LAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKM 573
Query: 179 PCKDEV 184
P + ++
Sbjct: 574 PFEPDI 579
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 188/592 (31%), Positives = 319/592 (53%), Gaps = 8/592 (1%)
Query: 9 FRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELD 68
F + +S L+Q CA +++ G L++Q+I+ G + +L +YS CG+L+
Sbjct: 192 FEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLE 251
Query: 69 YAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACA 128
A ++FD ++ R+ V+W MI G ++ + + L F M G +QF S VL C+
Sbjct: 252 SARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCS 311
Query: 129 SLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTS 188
LGS G +H ++ S +L L + L DMY CG++ +A VF + + V W S
Sbjct: 312 KLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNS 371
Query: 189 MIDGYVKNGNFEKALIAYKKMV-TDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKF 247
+I G +NG E+A++ Y++++ D++ + +SA + F GK LH + K
Sbjct: 372 IISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKL 431
Query: 248 GFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNA 307
G+E F+G L +Y K+ + SA VF R++V +T ++ G+ + E A+
Sbjct: 432 GYERSVFVGTTLLSMYFKNREAESAQKVFDVMKE-RDVVLWTEMIVGHSRLGNSELAVQF 490
Query: 308 FIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGK 367
FI++ + F+ SS+I AC++ A L G + H ++ FD V ALVDMYGK
Sbjct: 491 FIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGK 550
Query: 368 CGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNL 427
G ++ + +F NP+ WN+++G ++QHG+ A+ F ++++ G P+AVT+++L
Sbjct: 551 NGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSL 610
Query: 428 LKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFI-NSMPFE 486
L CSH G G + ++ K G+ +HY+C+++L+ +AG + E + I S P
Sbjct: 611 LAACSHRGSTLQG-KFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGN 669
Query: 487 PTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLR 546
A W + L AC + + AA +++KL+PE++ H+LLSN+YA +WEDV +R
Sbjct: 670 NQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMR 729
Query: 547 KMIRDGNMKKLPGYSWVDI-GNETHVFGVEDWSHPRKKEIYEKLDSLLDQIK 597
+ IR K PG SW+++ N T VF D S+P E+ + L+++K
Sbjct: 730 RKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNP---EVVSQAQDELNRLK 778
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/505 (28%), Positives = 252/505 (49%), Gaps = 22/505 (4%)
Query: 16 SKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCT---FLTNHLLNLYSKCGELDYAIK 72
+ +V +L + C L + +Q+HA ++ G T + N+L+++Y +CG L+ A K
Sbjct: 94 ASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARK 153
Query: 73 LFDRMSKRNMVSWTAMITGFFRSLRFRE-ALDTFCQMRAEGETASQFALSSVLQACASLG 131
+FD+M RN+VS+ A+ + + R+ F A M E + +S++Q CA L
Sbjct: 154 VFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLE 213
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMID 191
+ G ++ ++K G+ + + +++ MYS CG++ A ++F+ + +D V W +MI
Sbjct: 214 DVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIV 273
Query: 192 GYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEY 251
G +KN E L+ ++ M+ V Q L+ C+ L ++S GK +HA I+
Sbjct: 274 GSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLA 333
Query: 252 ETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID- 310
+ + NAL D+Y GDM A VF N+VS+ +I+ G E E+A+ +
Sbjct: 334 DLPLDNALLDMYCSCGDMREAFYVFGRIHN-PNLVSWNSIISGCSENGFGEQAMLMYRRL 392
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGL 370
LR S P+E+TFS+ I A A + HG LLHGQV K ++R FV + L+ MY K
Sbjct: 393 LRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNRE 452
Query: 371 FDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKG 430
+ + ++FD ++ + W ++ ++ G A++ F EM + + + +++
Sbjct: 453 AESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGA 512
Query: 431 CSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCI-------IDLLGRAGKLKEVEDFINSM 483
CS M+ G +++ + ++C+ +D+ G+ GK + E I S+
Sbjct: 513 CSDMAMLRQG--------EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAET-IFSL 563
Query: 484 PFEPTAFGWCSFLGACKTHGDKERA 508
P W S LGA HG E+A
Sbjct: 564 ASNPDLKCWNSMLGAYSQHGMVEKA 588
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 198/387 (51%), Gaps = 18/387 (4%)
Query: 52 FLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAE 111
+ N+L+++Y +C L+ A K+FD+M +RN+V+ + + F + +L + Q+
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGL-SAVFEYVSMGSSLHS--QIIKL 79
Query: 112 GETASQFAL------SSVLQ---ACASLGSIQFGVQVHCLVVKSGFGCEL---FLGSNLT 159
G F + SSV++ C S+ ++ Q+H LV+ +G G + +NL
Sbjct: 80 GSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI 139
Query: 160 DMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK-ALIAYKKMVTDNVFIDQ 218
MY +CG + A KVF++MP ++ V + ++ Y +N +F A M + V +
Sbjct: 140 SMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNS 199
Query: 219 HVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS 278
S + C L+ G SL++ I+K G+ + ++ +YS GD+ SA +F
Sbjct: 200 STFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDC 259
Query: 279 DSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEH 338
+ R+ V++ ++ G ++ D++E L F ++ SG++P +FT+S ++ C+
Sbjct: 260 VNN-RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSL 318
Query: 339 GSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQ 398
G L+H +++ + D + +AL+DMY CG + +F I NPN +WN+++ ++
Sbjct: 319 GKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSE 378
Query: 399 HGLGRNAIETFNEMVDRGL-KPNAVTF 424
+G G A+ + ++ +P+ TF
Sbjct: 379 NGFGEQAMLMYRRLLRMSTPRPDEYTF 405
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 167/379 (44%), Gaps = 35/379 (9%)
Query: 4 RNLFRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSK 63
R L R D + I A+ + GK LH Q+ + G F+ LL++Y K
Sbjct: 390 RRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFK 449
Query: 64 CGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSV 123
E + A K+FD M +R++V WT MI G R A+ F +M E + F+LSSV
Sbjct: 450 NREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSV 509
Query: 124 LQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDE 183
+ AC+ + ++ G HCL +++GF C + + L DMY K G+ A +F D
Sbjct: 510 IGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDL 569
Query: 184 VLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAI 243
W SM+ Y ++G EKAL +++++ + D S L+AC+ + GK
Sbjct: 570 KCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGK----- 624
Query: 244 IVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEK 303
F+ N + + K+G F+ S N+VS +VD +E+ +
Sbjct: 625 ----------FLWNQMKEQGIKAG--------FKHYSCMVNLVSKAGLVDEALELIEQSP 666
Query: 304 ALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVD 363
N +L + +L+ AC N L+ G Q++K + D L +
Sbjct: 667 PGNNQAEL-----------WRTLLSACVNTRNLQIGLYAAEQILKLD-PEDTATHILLSN 714
Query: 364 MYGKCGLFDHSIQLFDEIE 382
+Y G ++ ++ +I
Sbjct: 715 LYAVNGRWEDVAEMRRKIR 733
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 330 bits (847), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 182/546 (33%), Positives = 298/546 (54%), Gaps = 5/546 (0%)
Query: 24 QTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMV 83
+ + K + G +H +++R ++ N LL +Y G+++ A +FD M R+++
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 84 SWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLV 143
SW MI+G++R+ +AL F M E + S+L C L ++ G VH LV
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV 244
Query: 144 VKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKAL 203
+ G ++ + + L +MY KCG + +A VF+ M +D + WT MI+GY ++G+ E AL
Sbjct: 245 EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENAL 304
Query: 204 IAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLY 263
+ M + V + + S +S C + GK LH V+ + I +L +Y
Sbjct: 305 ELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMY 364
Query: 264 SKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTF 323
+K + VF S + + ++AI+ G V+ + + AL F +R +EPN T
Sbjct: 365 AKCKRVDLCFRVF-SGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATL 423
Query: 324 SSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN 383
+SL+ A A A L +H + K F ++ LV +Y KCG + + ++F+ I+
Sbjct: 424 NSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQE 483
Query: 384 PNDTA----WNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVED 439
+ + W L+ + HG G NA++ F EMV G+ PN +TF + L CSH+G+VE+
Sbjct: 484 KHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEE 543
Query: 440 GLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGAC 499
GL F M + Y + R HY CI+DLLGRAG+L E + I ++PFEPT+ W + L AC
Sbjct: 544 GLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAAC 603
Query: 500 KTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPG 559
TH + + ++AA KL +LEPEN+G +VLL+NIYA +W+D+ +R M+ + ++K PG
Sbjct: 604 VTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPG 663
Query: 560 YSWVDI 565
+S ++I
Sbjct: 664 HSTIEI 669
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 240/511 (46%), Gaps = 8/511 (1%)
Query: 3 SRNLFRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYS 62
S L R + L K L+ A + +SK K LH +I GG + L+ L Y+
Sbjct: 2 SEVLRRANNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILST-LSVTYA 60
Query: 63 KCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGE--TASQFAL 120
CG + YA KLF+ M + +++S+ +I + R + +A+ F +M +EG +
Sbjct: 61 LCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTY 120
Query: 121 SSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPC 180
V +A L S++ G+ VH +++S FG + ++ + L MY G+V A VF+ M
Sbjct: 121 PFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKN 180
Query: 181 KDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSL 240
+D + W +MI GY +NG AL+ + MV ++V +D + S L C LK G+++
Sbjct: 181 RDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNV 240
Query: 241 HAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQ 300
H ++ + + + NAL ++Y K G M A VF R+++++T +++GY E
Sbjct: 241 HKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMER-RDVITWTCMINGYTEDGD 299
Query: 301 LEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSA 360
+E AL ++ G+ PN T +SL+ C + K+ G LHG V+ D + ++
Sbjct: 300 VENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETS 359
Query: 361 LVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPN 420
L+ MY KC D ++F + W+ ++ Q+ L +A+ F M ++PN
Sbjct: 360 LISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPN 419
Query: 421 AVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFI 480
T +LL + + +N + K G M + ++ + + G L+
Sbjct: 420 IATLNSLLPAYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIF 478
Query: 481 NSMPFEPTA---FGWCSFLGACKTHGDKERA 508
N + + + W + + HGD A
Sbjct: 479 NGIQEKHKSKDVVLWGALISGYGMHGDGHNA 509
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 154/340 (45%), Gaps = 38/340 (11%)
Query: 6 LFRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCG 65
L +F ++ +A L+ C A +++ GK LH +R + L+++Y+KC
Sbjct: 309 LMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCK 368
Query: 66 ELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQ 125
+D ++F SK + W+A+I G ++ +AL F +MR E + L+S+L
Sbjct: 369 RVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLP 428
Query: 126 ACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVF----EEMPCK 181
A A+L ++ + +HC + K+GF L + L +YSKCG + A K+F E+ K
Sbjct: 429 AYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSK 488
Query: 182 DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLH 241
D VLW ++I GY +G+ AL + +MV V ++ S L+AC+ H
Sbjct: 489 DVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACS-----------H 537
Query: 242 AIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQL 301
+ +V+ G F+ L + SN +T IVD +L
Sbjct: 538 SGLVEEGLTLFRFMLEHYKTL--------ARSN------------HYTCIVDLLGRAGRL 577
Query: 302 EKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSL 341
++A N + EP + +L+ AC ++ G +
Sbjct: 578 DEAYNLITTI---PFEPTSTVWGALLAACVTHENVQLGEM 614
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 197/635 (31%), Positives = 323/635 (50%), Gaps = 37/635 (5%)
Query: 16 SKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSK--CGELDYAIKL 73
S ++ I K + KQLH+Q I G P L + G + YA KL
Sbjct: 31 SNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKL 90
Query: 74 FDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACA-SLGS 132
F ++ + ++V W MI G+ + E + + M EG T +L G+
Sbjct: 91 FVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGA 150
Query: 133 IQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVL-WTSMID 191
+ G ++HC VVK G G L++ + L MYS CG + A VF+ CK++V W MI
Sbjct: 151 LACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRR-CKEDVFSWNLMIS 209
Query: 192 GYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEY 251
GY + +E+++ +M + V L LSAC+ +K K +H + + E
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 252 ETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLE--------- 302
+ NAL + Y+ G+M A +F+S R+++S+T+IV GYVE L+
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKA-RDVISWTSIVKGYVERGNLKLARTYFDQM 328
Query: 303 ----------------------KALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGS 340
++L F +++++G+ P+EFT S++ ACA+ LE G
Sbjct: 329 PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE 388
Query: 341 LLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHG 400
+ + K D V +AL+DMY KCG + + ++F +++ + W +V A +G
Sbjct: 389 WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNG 448
Query: 401 LGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHY 460
G+ AI+ F +M D ++P+ +T++ +L C+H+GMV+ +F M + + P HY
Sbjct: 449 QGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHY 508
Query: 461 NCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEP 520
C++D+LGRAG +KE + + MP P + W + LGA + H D+ A+LAA K+++LEP
Sbjct: 509 GCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEP 568
Query: 521 ENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHP 580
+N + LL NIYA ++W+D+R +R+ I D +KK PG+S +++ H F D SH
Sbjct: 569 DNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHL 628
Query: 581 RKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDT 615
+ +EIY KL+ L + Y+P T +L E D
Sbjct: 629 QSEEIYMKLEELAQESTFAAYLPDTSELLFEAGDA 663
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 20/230 (8%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + ++ CA L G+ + + + + N L+++Y KCG + A K+F
Sbjct: 367 DEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVF 426
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
M +R+ +WTAM+ G + + +EA+ F QM+ VL AC G +
Sbjct: 427 HDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVD 486
Query: 135 FGVQVHCLVVKS--------GFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVL 185
+ + +GC + DM + G V +A ++ +MP + ++
Sbjct: 487 QARKFFAKMRSDHRIEPSLVHYGC-------MVDMLGRAGLVKEAYEILRKMPMNPNSIV 539
Query: 186 WTSMIDGYVKNGNFEKALIAYKKMV---TDNVFIDQHVLCSTLSACTALK 232
W +++ + + A +A KK++ DN + +LC+ + C K
Sbjct: 540 WGALLGASRLHNDEPMAELAAKKILELEPDNGAV-YALLCNIYAGCKRWK 588
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 328 bits (842), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 180/596 (30%), Positives = 319/596 (53%), Gaps = 10/596 (1%)
Query: 6 LFRFRHKLCDSK-----AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPC-TFLTNHLLN 59
L+ F H D + + ++ C + +E++ G+ +H + + L ++ + L+
Sbjct: 45 LYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIY 104
Query: 60 LYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQM-RAEGETASQF 118
+Y KCG + A+++FD + K ++V+W++M++GF ++ +A++ F +M A T +
Sbjct: 105 MYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRV 164
Query: 119 ALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEM 178
L +++ AC L + + G VH V++ GF +L L ++L + Y+K +A +F+ +
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 179 PCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGK 238
KD + W+++I YV+NG +AL+ + M+ D + + L AC A G+
Sbjct: 225 AEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGR 284
Query: 239 SLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEM 298
H + ++ G E E + AL D+Y K A VF S +++VS+ A++ G+
Sbjct: 285 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVF-SRIPRKDVVSWVALISGFTLN 343
Query: 299 DQLEKALNAF-IDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFV 357
+++ F I L + P+ ++ +C+ LE H V+K+ FD +PF+
Sbjct: 344 GMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFI 403
Query: 358 SSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRG- 416
++LV++Y +CG ++ ++F+ I + W +L+ + HG G A+ETFN MV
Sbjct: 404 GASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSE 463
Query: 417 LKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEV 476
+KPN VTF+++L CSHAG++ +GL F M Y + P EHY ++DLLGR G L
Sbjct: 464 VKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 523
Query: 477 EDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKE 536
+ MPF PT + LGAC+ H + E A+ A KL +LE ++G ++L+SN+Y +
Sbjct: 524 IEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVK 583
Query: 537 RQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSL 592
+WE+V LR ++ +KK S ++I + H F +D HP K+ +Y L L
Sbjct: 584 GEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKEL 639
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 224/442 (50%), Gaps = 6/442 (1%)
Query: 70 AIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACAS 129
A ++F M+KR++ W ++ R ++ E L F M + E F L L+AC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 130 LGSIQFGVQVHCLVVKS-GFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTS 188
L + +G +H V K G +L++GS+L MY KCG + +A ++F+E+ D V W+S
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 189 MIDGYVKNGNFEKALIAYKKMV-TDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKF 247
M+ G+ KNG+ +A+ +++MV +V D+ L + +SACT L G+ +H +++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 248 GFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNA 307
GF + + N+L + Y+KS A N+F+ + ++++S++ ++ YV+ +AL
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAE-KDVISWSTVIACYVQNGAAAEALLV 251
Query: 308 FIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGK 367
F D+ + G EPN T +++ACA LE G H ++ + + VS+ALVDMY K
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 311
Query: 368 CGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEM-VDRGLKPNAVTFVN 426
C + + +F I + +W L+ F +G+ +IE F+ M ++ +P+A+ V
Sbjct: 312 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVK 371
Query: 427 LLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFE 486
+L CS G +E F+S YG +++L R G L N + +
Sbjct: 372 VLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK 430
Query: 487 PTAFGWCSFLGACKTHGDKERA 508
T W S + HG +A
Sbjct: 431 DTVV-WTSLITGYGIHGKGTKA 451
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 328 bits (842), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 164/437 (37%), Positives = 264/437 (60%), Gaps = 5/437 (1%)
Query: 257 NALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN-SG 315
N + + K G+ A V ++ S +N++++ ++ GYV Q E+AL A ++ + +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASD-QNVITWNLMIGGYVRNVQYEEALKALKNMLSFTD 160
Query: 316 IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSI 375
I+PN+F+F+S + ACA L H +H ++ + + +SSALVD+Y KCG S
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 376 QLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAG 435
++F ++ + + WN ++ FA HGL AI F+EM + P+++TF+ LL CSH G
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 436 MVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSF 495
++E+G YF M + + + P+ EHY ++DLLGRAG++KE + I SMP EP W S
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 496 LGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMK 555
L + +T+ + E ++A + L SG +VLLSNIY+ ++WE + +R+++ ++
Sbjct: 341 LSSSRTYKNPELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIR 397
Query: 556 KLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDT 615
K G SW++ G H F D SH K IY+ L+ L+ + K G+V T+ VL+++ +
Sbjct: 398 KAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEE 457
Query: 616 LKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDI 675
KE+ L+ HSE++A+AY +L S G I ++KN+R+CSDCH+ K +SK+ R II+RD
Sbjct: 458 EKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDR 517
Query: 676 SRFHHFSNGSCSCGDYW 692
RFH F +G CSC DYW
Sbjct: 518 IRFHRFEDGLCSCRDYW 534
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 143/311 (45%), Gaps = 22/311 (7%)
Query: 55 NHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET 114
N ++ K GE A K+ S +N+++W MI G+ R++++ EAL M + +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 115 -ASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACK 173
++F+ +S L ACA LG + VH L++ SG L S L D+Y+KCG++ + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 174 VFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKA 233
VF + D +W +MI G+ +G +A+ + +M ++V D L+ C+
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 234 FSFGKSLHAIIV-KFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIV 292
GK ++ +F + + A+ DL ++G + A + +S ++V + +++
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 293 D----------GYVEMDQLEKALNA-FIDLRN---------SGIEPNEFTFSSLIKACAN 332
G + + L KA + ++ L N S + E I+
Sbjct: 342 SSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKG 401
Query: 333 QAKLEHGSLLH 343
++ LE G ++H
Sbjct: 402 KSWLEFGGMIH 412
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 100/210 (47%), Gaps = 2/210 (0%)
Query: 2 ASRNLFRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLY 61
A +N+ F + + A + CA+ +L K +H+ +I G L++ L+++Y
Sbjct: 151 ALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVY 210
Query: 62 SKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALS 121
+KCG++ + ++F + + ++ W AMITGF EA+ F +M AE +
Sbjct: 211 AKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFL 270
Query: 122 SVLQACASLGSIQFGVQVHCLVVKS-GFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPC 180
+L C+ G ++ G + L+ + +L + D+ + G V +A ++ E MP
Sbjct: 271 GLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPI 330
Query: 181 K-DEVLWTSMIDGYVKNGNFEKALIAYKKM 209
+ D V+W S++ N E IA + +
Sbjct: 331 EPDVVIWRSLLSSSRTYKNPELGEIAIQNL 360
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 328 bits (841), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 315/580 (54%), Gaps = 21/580 (3%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM 82
+Q + L++ KQLHAQ+IR + L++ S C + + A+++F+++ + N+
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 83 VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCL 142
++I ++ + +A F +M+ G A F +L+AC+ + +H
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 143 VVKSGFGCELFLGSNLTDMYSKCGE--VSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFE 200
+ K G ++++ + L D YS+CG V DA K+FE+M +D V W SM+ G VK G
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 201 KALIAYKKM-----VTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFI 255
A + +M ++ N +D + C +S KAF + + E T
Sbjct: 203 DARRLFDEMPQRDLISWNTMLDGYARCREMS-----KAFELFEKMP--------ERNTVS 249
Query: 256 GNALTDLYSKSGDMVSASNVF-QSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+ + YSK+GDM A +F + +N+V++T I+ GY E L++A + S
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
G++ + S++ AC L G +H + + N + +V +AL+DMY KCG +
Sbjct: 310 GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 369
Query: 375 IQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHA 434
+F++I + +WNT++ HG G+ AIE F+ M G++P+ VTF+ +L C+HA
Sbjct: 370 FDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHA 429
Query: 435 GMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCS 494
G++++G++YFYSM+K+Y ++P+ EHY C++DLLGR G+LKE + +MP EP W +
Sbjct: 430 GLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGA 489
Query: 495 FLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNM 554
LGAC+ H + + AK L+KL+P + G + LLSNIYA WE V +R ++ +
Sbjct: 490 LLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGV 549
Query: 555 KKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLD 594
+K G S V++ + H F V D SHP+ +IY+ L SL++
Sbjct: 550 EKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 197/413 (47%), Gaps = 39/413 (9%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDY--AIKLFDRMSK 79
L++ C+ L K +H + + G ++ N L++ YS+CG L A+KLF++MS+
Sbjct: 123 LLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSE 182
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQV 139
R+ VSW +M+ G ++ R+A F +M + +++L A
Sbjct: 183 RDTVSWNSMLGGLVKAGELRDARRLFDEM----PQRDLISWNTMLDGYA----------- 227
Query: 140 HCLVVKSGFGCELFLG---------SNLTDMYSKCGEVSDACKVFEEM--PCKDEVLWTS 188
C + F ELF S + YSK G++ A +F++M P K+ V WT
Sbjct: 228 RCREMSKAF--ELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTI 285
Query: 189 MIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFG 248
+I GY + G ++A +MV + D + S L+ACT S G +H+I+ +
Sbjct: 286 IIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSN 345
Query: 249 FEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAF 308
++ NAL D+Y+K G++ A +VF +D +++VS+ ++ G ++A+ F
Sbjct: 346 LGSNAYVLNALLDMYAKCGNLKKAFDVF-NDIPKKDLVSWNTMLHGLGVHGHGKEAIELF 404
Query: 309 IDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYG 366
+R GI P++ TF +++ +C + ++ G + K +D P V LVD+ G
Sbjct: 405 SRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV-YDLVPQVEHYGCLVDLLG 463
Query: 367 KCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLK 418
+ G +I++ + PN W L+G H N ++ E++D +K
Sbjct: 464 RVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMH----NEVDIAKEVLDNLVK 512
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 16/185 (8%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ AV ++ C ++ LS G ++H+ L R ++ N LL++Y+KCG L A +F
Sbjct: 314 DAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVF 373
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ + K+++VSW M+ G +EA++ F +MR EG + +VL +C G I
Sbjct: 374 NDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLID 433
Query: 135 FGV-------QVHCLVVK-SGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDE-VL 185
G+ +V+ LV + +GC L D+ + G + +A KV + MP + V+
Sbjct: 434 EGIDYFYSMEKVYDLVPQVEHYGC-------LVDLLGRVGRLKEAIKVVQTMPMEPNVVI 486
Query: 186 WTSMI 190
W +++
Sbjct: 487 WGALL 491
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 183/562 (32%), Positives = 302/562 (53%), Gaps = 20/562 (3%)
Query: 17 KAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGE---LDYAIKL 73
K + ++ C EL+ QLH +I+ + + L++ + C E L YA +
Sbjct: 7 KPILSQLENCRSLVELN---QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSV 63
Query: 74 FDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSI 133
F+ + ++ W +MI G+ S +AL + +M +G + F VL+AC+ L I
Sbjct: 64 FESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDI 123
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
QFG VH VVK+GF +++ + L MY CGEV+ +VFE++P + V W S+I G+
Sbjct: 124 QFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGF 183
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFE--- 250
V N F A+ A+++M ++ V ++ ++ L AC K GK H + GF+
Sbjct: 184 VNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYF 243
Query: 251 -----YETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKAL 305
+ + +L D+Y+K GD+ +A +F R +VS+ +I+ GY + E+AL
Sbjct: 244 QSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPE-RTLVSWNSIITGYSQNGDAEEAL 302
Query: 306 NAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMY 365
F+D+ + GI P++ TF S+I+A Q + G +H V K F +D + ALV+MY
Sbjct: 303 CMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMY 362
Query: 366 GKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRG-LKPNAVTF 424
K G + + + F+++E + AW ++ A HG G A+ F M ++G P+ +T+
Sbjct: 363 AKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITY 422
Query: 425 VNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMP 484
+ +L CSH G+VE+G YF M ++G+ P EHY C++D+L RAG+ +E E + +MP
Sbjct: 423 LGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMP 482
Query: 485 FEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPE--NSGAHVLLSNIYAKERQWEDV 542
+P W + L C H + E + M EPE SG +VLLSNIYAK +W DV
Sbjct: 483 VKPNVNIWGALLNGCDIHENLELTD--RIRSMVAEPEELGSGIYVLLSNIYAKAGRWADV 540
Query: 543 RCLRKMIRDGNMKKLPGYSWVD 564
+ +R+ ++ + K+ G+S V+
Sbjct: 541 KLIRESMKSKRVDKVLGHSSVE 562
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 325 bits (833), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 192/556 (34%), Positives = 296/556 (53%), Gaps = 38/556 (6%)
Query: 12 KLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAI 71
+L + +LI+ + + +G+ LHA L+ G T + L+ Y +CG++ A
Sbjct: 12 RLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDAR 71
Query: 72 KLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLG 131
K+FD M KR++ MI R+ ++E+LD F +M +G F + S+L+A +L
Sbjct: 72 KVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLL 131
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMID 191
+FG +HCLV+K + + F+ S+L DMYSK GEV +A KVF ++ +D V++ +MI
Sbjct: 132 DREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMIS 191
Query: 192 GYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEY 251
GY N ++AL N+ D +L G +
Sbjct: 192 GYANNSQADEAL---------NLVKDMKLL--------------------------GIKP 216
Query: 252 ETFIGNALTDLYSKSGDMVSASNVFQS---DSGCRNIVSFTAIVDGYVEMDQLEKALNAF 308
+ NAL +S + S + + D ++VS+T+I+ G V Q EKA +AF
Sbjct: 217 DVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAF 276
Query: 309 IDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKC 368
+ G+ PN T +L+ AC A ++HG +HG V + FV SAL+DMYGKC
Sbjct: 277 KQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKC 336
Query: 369 GLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLL 428
G ++ LF + +N+++ +A HGL A+E F++M G K + +TF +L
Sbjct: 337 GFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAIL 396
Query: 429 KGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPT 488
CSHAG+ + G N F M Y ++PR EHY C++DLLGRAGKL E + I +M EP
Sbjct: 397 TACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPD 456
Query: 489 AFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKM 548
F W + L AC+ HG+ E A++AA L +LEPENSG +LL+++YA WE V ++KM
Sbjct: 457 LFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKM 516
Query: 549 IRDGNMKKLPGYSWVD 564
I+ ++ G SWV+
Sbjct: 517 IKKKRFRRFLGSSWVE 532
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 325 bits (833), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 168/557 (30%), Positives = 303/557 (54%), Gaps = 4/557 (0%)
Query: 35 GKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFR 94
G+ +H +++ G + + + L+ +Y+K + ++++FD M +R++ SW +I+ F++
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 95 SLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFL 154
S +AL+ F +M + G + +L+ + AC+ L ++ G ++H VK GF + ++
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 155 GSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNV 214
S L DMY KC + A +VF++MP K V W SMI GYV G+ + + +M+ +
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT 305
Query: 215 FIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASN 274
Q L S L AC+ + GK +H +++ + ++ +L DLY K G+ A
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAET 365
Query: 275 VFQSDSGCRNIV-SFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQ 333
VF +++ S+ ++ Y+ + KA+ + + + G++P+ TF+S++ AC+
Sbjct: 366 VFSKTQ--KDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQL 423
Query: 334 AKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLV 393
A LE G +H + + + D + SAL+DMY KCG + ++F+ I + +W ++
Sbjct: 424 AALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMI 483
Query: 394 GVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGV 453
+ HG R A+ F+EM GLKP+ VT + +L C HAG++++GL +F M YG+
Sbjct: 484 SAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGI 543
Query: 454 MPREEHYNCIIDLLGRAGKLKEVEDFINSMP-FEPTAFGWCSFLGACKTHGDKERAKLAA 512
P EHY+C+ID+LGRAG+L E + I P A + AC H + A
Sbjct: 544 EPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIA 603
Query: 513 YKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVF 572
L++ P+++ +++L N+YA W+ R +R +++ ++K PG SW+++ ++ F
Sbjct: 604 RLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHF 663
Query: 573 GVEDWSHPRKKEIYEKL 589
ED SH R + +YE L
Sbjct: 664 FAEDRSHLRAENVYECL 680
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 251/497 (50%), Gaps = 6/497 (1%)
Query: 15 DSKAVAQLIQTCAQA-KELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKL 73
+S + L++ C + K L + K +H +++ G L L+N+Y C + A +
Sbjct: 2 ESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHV 61
Query: 74 FDRMSKRNMVS-WTAMITGFFRSLRFREALDTFCQM-RAEGETASQFALSSVLQACASLG 131
F+ R+ V W ++++G+ ++ F + L+ F ++ F +V++A +LG
Sbjct: 62 FENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG 121
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMID 191
G +H LVVKSG+ C++ + S+L MY+K ++ +VF+EMP +D W ++I
Sbjct: 122 REFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVIS 181
Query: 192 GYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEY 251
+ ++G EKAL + +M + + L +SAC+ L GK +H VK GFE
Sbjct: 182 CFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL 241
Query: 252 ETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL 311
+ ++ +AL D+Y K + A VFQ +++V++ +++ GYV + + +
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMPR-KSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 312 RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLF 371
G P++ T +S++ AC+ L HG +HG V++ + D +V+ +L+D+Y KCG
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360
Query: 372 DHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGC 431
+ + +F + + +WN ++ + G A+E +++MV G+KP+ VTF ++L C
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 432 SHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFG 491
S +E G S+ + + E + ++D+ + G KE NS+P +
Sbjct: 421 SQLAALEKGKQIHLSISE-SRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVS 478
Query: 492 WCSFLGACKTHGDKERA 508
W + A +HG A
Sbjct: 479 WTVMISAYGSHGQPREA 495
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 196/376 (52%), Gaps = 4/376 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
+S ++ I C++ L +GK++H + ++ G ++ + L+++Y KC L+ A ++F
Sbjct: 207 NSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVF 266
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+M ++++V+W +MI G+ + ++ +M EG SQ L+S+L AC+ ++
Sbjct: 267 QKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLL 326
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G +H V++S ++++ +L D+Y KCGE + A VF + W MI Y+
Sbjct: 327 HGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYI 386
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
GN+ KA+ Y +MV+ V D S L AC+ L A GK +H I + E +
Sbjct: 387 SVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDEL 446
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+ +AL D+YSK G+ A +F S +++VS+T ++ Y Q +AL F +++
Sbjct: 447 LLSALLDMYSKCGNEKEAFRIFNSIPK-KDVVSWTVMISAYGSHGQPREALYQFDEMQKF 505
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFD 372
G++P+ T +++ AC + ++ G Q ++ + +P + S ++D+ G+ G
Sbjct: 506 GLKPDGVTLLAVLSACGHAGLIDEGLKFFSQ-MRSKYGIEPIIEHYSCMIDILGRAGRLL 564
Query: 373 HSIQLFDEIENPNDTA 388
+ ++ + +D A
Sbjct: 565 EAYEIIQQTPETSDNA 580
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/538 (32%), Positives = 290/538 (53%), Gaps = 32/538 (5%)
Query: 187 TSMIDGYVKNGNFEKALIAYKKMVT--DNVFIDQHVLCSTLSACTALKAFSFGKSLHAII 244
SMI + K+ EK+ Y+++++ +++ D + + + ACT L+ G +H +
Sbjct: 75 NSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMT 134
Query: 245 VKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS----DSGC------------------ 282
++ GF+ + + L LY++ G + S VF S D C
Sbjct: 135 IRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFAR 194
Query: 283 --------RNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQA 334
R+ +++ A++ GY ++ + +ALN F ++ G++ N S++ AC
Sbjct: 195 KLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLG 254
Query: 335 KLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVG 394
L+ G H + + +++ LVD+Y KCG + ++++F +E N W++ +
Sbjct: 255 ALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALN 314
Query: 395 VFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVM 454
A +G G +E F+ M G+ PNAVTFV++L+GCS G V++G +F SM +G+
Sbjct: 315 GLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIE 374
Query: 455 PREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYK 514
P+ EHY C++DL RAG+L++ I MP +P A W S L A + + + E LA+ K
Sbjct: 375 PQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKK 434
Query: 515 LMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGV 574
+++LE N GA+VLLSNIYA W++V +R+ ++ ++K PG S +++ E H F V
Sbjct: 435 MLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFV 494
Query: 575 EDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSL 634
D SHP+ +I + ++++ GY T V+ ++D+ KE L HSE+ A+A+ +
Sbjct: 495 GDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGI 554
Query: 635 LVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
+ PI + KNLRVC DCH ISK+ R IIVRD +RFHHF +G CSC +W
Sbjct: 555 MSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 183/396 (46%), Gaps = 40/396 (10%)
Query: 36 KQLHAQLIRGGCLPCTFLTNHLLNL--YSKCGELDYAIKLFDRMSKRNMVSWTAMITGFF 93
+Q+HA+L G L L H + S LDYA ++ DR K + + +MI
Sbjct: 23 RQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHC 82
Query: 94 RSLRFREALDTFCQMRAEGE--TASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCE 151
+S ++ D + ++ + G + ++ ++QAC L + G+QVH + ++ GF +
Sbjct: 83 KSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDND 142
Query: 152 LFLGSNLTDMY-------------------------------SKCGEVSDACKVFEEMPC 180
+ + L +Y ++CG+V A K+FE MP
Sbjct: 143 PHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPE 202
Query: 181 KDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSL 240
+D + W +MI GY + G +AL + M + V ++ + S LSACT L A G+
Sbjct: 203 RDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWA 262
Query: 241 HAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQ 300
H+ I + + + L DLY+K GDM A VF +N+ ++++ ++G
Sbjct: 263 HSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE-KNVYTWSSALNGLAMNGF 321
Query: 301 LEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS-- 358
EK L F ++ G+ PN TF S+++ C+ ++ G H ++ F +P +
Sbjct: 322 GEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ-RHFDSMRNEFGIEPQLEHY 380
Query: 359 SALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLV 393
LVD+Y + G + ++ + ++ P+ W++L+
Sbjct: 381 GCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 137/295 (46%), Gaps = 32/295 (10%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYS------------ 62
D+ V L+Q C + G Q+H IR G + L++LY+
Sbjct: 107 DNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVF 166
Query: 63 -------------------KCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALD 103
+CG++ +A KLF+ M +R+ ++W AMI+G+ + REAL+
Sbjct: 167 NSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALN 226
Query: 104 TFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYS 163
F M+ EG + A+ SVL AC LG++ G H + ++ + L + L D+Y+
Sbjct: 227 VFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYA 286
Query: 164 KCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCS 223
KCG++ A +VF M K+ W+S ++G NG EK L + M D V + S
Sbjct: 287 KCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVS 346
Query: 224 TLSACTALKAFSFG-KSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQ 277
L C+ + G + ++ +FG E + L DLY+++G + A ++ Q
Sbjct: 347 VLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQ 401
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 104/196 (53%), Gaps = 4/196 (2%)
Query: 18 AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM 77
A+ ++ C Q L +G+ H+ + R L L++LY+KCG+++ A+++F M
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM 301
Query: 78 SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
++N+ +W++ + G + + L+ F M+ +G T + SVL+ C+ +G + G
Sbjct: 302 EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG- 360
Query: 138 QVHCLVVKSGFGCELFLGSN--LTDMYSKCGEVSDACKVFEEMPCKDE-VLWTSMIDGYV 194
Q H +++ FG E L L D+Y++ G + DA + ++MP K +W+S++
Sbjct: 361 QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASR 420
Query: 195 KNGNFEKALIAYKKMV 210
N E ++A KKM+
Sbjct: 421 MYKNLELGVLASKKML 436
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 323 bits (828), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/528 (32%), Positives = 290/528 (54%), Gaps = 2/528 (0%)
Query: 53 LTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEG 112
+ N +LNLY KC + A LFD+M +R+MVSW MI+G+ E L +MR +G
Sbjct: 181 VMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDG 240
Query: 113 ETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDAC 172
Q + L ++ ++ G +HC +VK+GF ++ L + L MY KCG+ +
Sbjct: 241 LRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASY 300
Query: 173 KVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALK 232
+V E +P KD V WT MI G ++ G EKALI + +M+ + + S +++C L
Sbjct: 301 RVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLG 360
Query: 233 AFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIV 292
+F G S+H +++ G+ +T N+L +Y+K G + + +F+ + R++VS+ AI+
Sbjct: 361 SFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNE-RDLVSWNAII 419
Query: 293 DGYVEMDQLEKALNAFIDLRNSGIEP-NEFTFSSLIKACANQAKLEHGSLLHGQVVKFNF 351
GY + L KAL F +++ ++ + FT SL++AC++ L G L+H V++
Sbjct: 420 SGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFI 479
Query: 352 DRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNE 411
V +ALVDMY KCG + + + FD I + +W L+ + HG G A+E ++E
Sbjct: 480 RPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSE 539
Query: 412 MVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAG 471
+ G++PN V F+ +L CSH GMV+ GL F SM + +GV P EH C++DLL RA
Sbjct: 540 FLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAK 599
Query: 472 KLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSN 531
++++ F P+ L AC+ +G E + +++L+P ++G +V L +
Sbjct: 600 RIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGH 659
Query: 532 IYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSH 579
+A ++W+DV +R +KKLPG+S +++ +T F + SH
Sbjct: 660 SFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH 707
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 141/542 (26%), Positives = 266/542 (49%), Gaps = 9/542 (1%)
Query: 13 LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIK 72
L D+ L++ CA + LS G +H Q++ G ++++ L+NLY+K G L +A K
Sbjct: 43 LPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARK 102
Query: 73 LFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGS 132
+F+ M +R++V WTAMI + R+ EA +MR +G L +L +
Sbjct: 103 VFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQ 162
Query: 133 IQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDG 192
+Q +H V GF C++ + +++ ++Y KC V DA +F++M +D V W +MI G
Sbjct: 163 LQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISG 219
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
Y GN + L +M D + DQ ++LS + G+ LH IVK GF+ +
Sbjct: 220 YASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVD 279
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR 312
+ AL +Y K G ++ V ++ +++V +T ++ G + + + EKAL F ++
Sbjct: 280 MHLKTALITMYLKCGKEEASYRVLETIPN-KDVVCWTVMISGLMRLGRAEKALIVFSEML 338
Query: 313 NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
SG + + +S++ +CA + G+ +HG V++ + D ++L+ MY KCG D
Sbjct: 339 QSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLD 398
Query: 373 HSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKP-NAVTFVNLLKGC 431
S+ +F+ + + +WN ++ +AQ+ A+ F EM + ++ ++ T V+LL+ C
Sbjct: 399 KSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQAC 458
Query: 432 SHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFG 491
S AG + G + + + P ++D+ + G L+ + +S+ ++
Sbjct: 459 SSAGALPVG-KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVV-S 516
Query: 492 WCSFLGACKTHGDKERAKLAAYKLMK--LEPENSGAHVLLSNIYAKERQWEDVRCLRKMI 549
W + HG + A + + +EP + +LS+ + ++ M+
Sbjct: 517 WGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMV 576
Query: 550 RD 551
RD
Sbjct: 577 RD 578
Score = 176 bits (446), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 179/326 (54%), Gaps = 3/326 (0%)
Query: 31 ELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMIT 90
+L G+ LH Q+++ G L L+ +Y KCG+ + + ++ + + +++V WT MI+
Sbjct: 260 DLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMIS 319
Query: 91 GFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGC 150
G R R +AL F +M G S A++SV+ +CA LGS G VH V++ G+
Sbjct: 320 GLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTL 379
Query: 151 ELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMV 210
+ ++L MY+KCG + + +FE M +D V W ++I GY +N + KAL+ +++M
Sbjct: 380 DTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMK 439
Query: 211 TDNV-FIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDM 269
V +D + S L AC++ A GK +H I+++ + + AL D+YSK G +
Sbjct: 440 FKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYL 499
Query: 270 VSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKA 329
+A F S S +++VS+ ++ GY + + AL + + +SG+EPN F +++ +
Sbjct: 500 EAAQRCFDSISW-KDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSS 558
Query: 330 CANQAKLEHGSLLHGQVVKFNFDRDP 355
C++ ++ G + +V+ +F +P
Sbjct: 559 CSHNGMVQQGLKIFSSMVR-DFGVEP 583
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 176/357 (49%), Gaps = 11/357 (3%)
Query: 99 REALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNL 158
++ L TF M A F S+L+ACASL + FG+ +H V+ +GF + ++ S+L
Sbjct: 28 KQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSL 87
Query: 159 TDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQ 218
++Y+K G ++ A KVFEEM +D V WT+MI Y + G +A +M +
Sbjct: 88 VNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGP 147
Query: 219 HVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS 278
L LS + + LH V +GF+ + + N++ +LY K + A ++F
Sbjct: 148 VTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQ 204
Query: 279 DSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEH 338
R++VS+ ++ GY + + + L +R G+ P++ TF + + LE
Sbjct: 205 MEQ-RDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEM 263
Query: 339 GSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQ 398
G +LH Q+VK FD D + +AL+ MY KCG + S ++ + I N + W ++ +
Sbjct: 264 GRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMR 323
Query: 399 HGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG-------LNYFYSMD 448
G A+ F+EM+ G ++ +++ C+ G + G L + Y++D
Sbjct: 324 LGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD 380
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 122/239 (51%), Gaps = 4/239 (1%)
Query: 186 WTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIV 245
+ S I+ +G+ ++ L + M+ + + D S L AC +L+ SFG S+H ++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 246 KFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKAL 305
GF + +I ++L +LY+K G + A VF+ + R++V +TA++ Y + +A
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFE-EMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 306 NAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMY 365
+ ++R GI+P T ++ +L+ LH V + FD D V ++++++Y
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQ---CLHDFAVIYGFDCDIAVMNSMLNLY 189
Query: 366 GKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTF 424
KC + LFD++E + +WNT++ +A G ++ M GL+P+ TF
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 302 EKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSAL 361
++ L+ F + + + P+ FTF SL+KACA+ +L G +H QV+ F D ++SS+L
Sbjct: 28 KQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSL 87
Query: 362 VDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNA 421
V++Y K GL H+ ++F+E+ + W ++G +++ G+ A NEM +G+KP
Sbjct: 88 VNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGP 147
Query: 422 VTFVNLLKGCSHAGMVE--DGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKL 473
VT + +L G ++ Y D VM + C D +G A L
Sbjct: 148 VTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDL 201
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 194/616 (31%), Positives = 314/616 (50%), Gaps = 75/616 (12%)
Query: 53 LTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEG 112
LT+ + +L +K G + A ++FD M + + V+W M+T + R +EA+ F Q+R
Sbjct: 7 LTSKIASL-AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSD 65
Query: 113 ETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDAC 172
++ +++L CASLG+++FG ++ LV++SGF L + ++L DMY KC + A
Sbjct: 66 AKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSAN 125
Query: 173 KVFEEMPC--KDEVLWTSMIDGYVKNGNFEKALIAYKKMVTD-----NVFIDQHVLCSTL 225
KVF +M C ++EV W S++ Y+ FE AL + +M N+ I H C L
Sbjct: 126 KVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKL 185
Query: 226 SACTAL-------------KAFS--------------FGKSLHAIIVKFGFEYETFIGNA 258
+C +L FS +G+ +HA+++K G+ N+
Sbjct: 186 ESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNS 245
Query: 259 LTDLYSKSGDMVSASNVFQSDS------------GC------------------RNIVSF 288
+ Y+K G A +S C +NIV++
Sbjct: 246 VLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTW 305
Query: 289 TAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVK 348
T ++ GY E+AL F+++ SG++ + F + +++ AC+ A L HG ++HG ++
Sbjct: 306 TTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIH 365
Query: 349 FNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIET 408
F +V +ALV++Y KCG + + F +I N + +WNT++ F HGL A++
Sbjct: 366 CGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKL 425
Query: 409 FNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLG 468
++ M+ G+KP+ VTF+ LL CSH+G+VE+G F SM K Y + +H C+ID+ G
Sbjct: 426 YDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFG 485
Query: 469 RAGKLKEVEDFINSMPFEPT----AFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSG 524
R G L E +D + T W + LGAC TH E + + L EP
Sbjct: 486 RGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEM 545
Query: 525 AHVLLSNIYAKERQW---EDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPR 581
+ VLLSN+Y +W EDVR R+M+ G MKK PG SW+++GN+ F V D SHPR
Sbjct: 546 SFVLLSNLYCSTGRWKEGEDVR--REMVERG-MKKTPGCSWIEVGNQVSTFVVGDSSHPR 602
Query: 582 KKEIYEKLDSLLDQIK 597
+E+ E L+ L +++
Sbjct: 603 LEELSETLNCLQHEMR 618
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 216/471 (45%), Gaps = 75/471 (15%)
Query: 7 FRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGE 66
RF D + ++ TCA + G+++ + +IR G + N L+++Y KC +
Sbjct: 61 LRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSD 120
Query: 67 LDYAIKLFDRM--SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAE------------- 111
A K+F M RN V+W +++ + + +F ALD F +M
Sbjct: 121 TLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHA 180
Query: 112 --GETASQFAL----------------SSVLQACASLGS-IQFGVQVHCLVVKSGFGCEL 152
G+ S +L SS++ AC++ S + +G VH +++K+G+ +
Sbjct: 181 HCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAV 240
Query: 153 FLGSNLTDMYSKCG---------------------EVSDAC----------KVFEEMPCK 181
+++ Y+K G + DAC +VF P K
Sbjct: 241 EAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEK 300
Query: 182 DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLH 241
+ V WT+MI GY +NG+ E+AL + +M+ V D + L AC+ L GK +H
Sbjct: 301 NIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIH 360
Query: 242 AIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQL 301
++ GF+ ++GNAL +LY+K GD+ A F D +++VS+ ++ +
Sbjct: 361 GCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAF-GDIANKDLVSWNTMLFAFGVHGLA 419
Query: 302 EKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVK-FNFDRDPFVSSA 360
++AL + ++ SGI+P+ TF L+ C++ +E G ++ +VK + + +
Sbjct: 420 DQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTC 479
Query: 361 LVDMYGKCGLFDHSIQLFDE-----IENPNDTAWNTLVGVFAQHG---LGR 403
++DM+G+ G + L ++ N+++W TL+G + H LGR
Sbjct: 480 MIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGR 530
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 322 bits (825), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 185/607 (30%), Positives = 306/607 (50%), Gaps = 37/607 (6%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNL--YSKCGELDYAIKLFDRMSK 79
L+ + K L KQ+ AQ+I G + F ++ L+ S+ LDY++K+ +
Sbjct: 56 LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEG---ETASQFALSSVLQACASLGSIQFG 136
N+ SW I GF S +E+ + QM G F + + CA L G
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 137 VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKN 196
+ V+K + + M++ CG++ +A KVF+E P +D V W +I+GY K
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKI 235
Query: 197 GNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIG 256
G EKA+ YK M ++ V D + +S+C+ L + GK + + + G +
Sbjct: 236 GEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 295
Query: 257 NALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGY--------------------- 295
NAL D++SK GD+ A +F + R IVS+T ++ GY
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEK-RTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 296 ----------VEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQ 345
V+ + + AL F +++ S +P+E T + AC+ L+ G +H
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 346 VVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNA 405
+ K++ + + ++LVDMY KCG ++ +F I+ N + ++G A HG A
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 406 IETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIID 465
I FNEM+D G+ P+ +TF+ LL C H GM++ G +YF M + + P+ +HY+ ++D
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 534
Query: 466 LLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGA 525
LLGRAG L+E + + SMP E A W + L C+ HG+ E + AA KL++L+P +SG
Sbjct: 535 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGI 594
Query: 526 HVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEI 585
+VLL +Y + WED + R+M+ + ++K+PG S +++ F V D S P ++I
Sbjct: 595 YVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKI 654
Query: 586 YEKLDSL 592
Y++L L
Sbjct: 655 YDRLHCL 661
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 220/473 (46%), Gaps = 47/473 (9%)
Query: 9 FRHKLCDSK----AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKC 64
RH C+S+ L + CA + S G + +++ + + N +++++ C
Sbjct: 145 LRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASC 204
Query: 65 GELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVL 124
G+++ A K+FD R++VSW +I G+ + +A+ + M +EG + ++
Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLV 264
Query: 125 QACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDA------------- 171
+C+ LG + G + + V ++G + L + L DM+SKCG++ +A
Sbjct: 265 SSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV 324
Query: 172 -----------C-------KVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDN 213
C K+F++M KD VLW +MI G V+ + AL +++M T N
Sbjct: 325 SWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSN 384
Query: 214 VFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSAS 273
D+ + LSAC+ L A G +H I K+ +G +L D+Y+K G++ A
Sbjct: 385 TKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEAL 444
Query: 274 NVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQ 333
+VF RN +++TAI+ G A++ F ++ ++GI P+E TF L+ AC +
Sbjct: 445 SVFHGIQ-TRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHG 503
Query: 334 AKLEHGSLLHGQV-VKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTA-WNT 391
++ G Q+ +FN + S +VD+ G+ GL + + +L + + D A W
Sbjct: 504 GMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGA 563
Query: 392 LVGVFAQHG---LGRNAIETFNEMVDRGLKPNAVTFVNLLKGC-SHAGMVEDG 440
L+ HG LG A + E L P+ LL G A M ED
Sbjct: 564 LLFGCRMHGNVELGEKAAKKLLE-----LDPSDSGIYVLLDGMYGEANMWEDA 611
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 322 bits (824), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 184/551 (33%), Positives = 299/551 (54%), Gaps = 41/551 (7%)
Query: 81 NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVH 140
+++ + M+ F + L F ++R +G F L VL++ L + G +VH
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 141 CLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFE 200
VK+G + ++ ++L MY+ G++ KVF+EMP +D V W +I YV NG FE
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 201 KALIAYKKMVTD-NVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNAL 259
A+ +K+M + N+ D+ + STLSAC+ALK G+ ++ +V FE IGNAL
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNAL 188
Query: 260 TDLYSKSGDMVSASNVFQS------------------------------DSGCRNIVSFT 289
D++ K G + A VF S S +++V +T
Sbjct: 189 VDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWT 248
Query: 290 AIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF 349
A+++GYV+ ++ ++AL F ++ +GI P+ F SL+ CA LE G +HG + +
Sbjct: 249 AMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINEN 308
Query: 350 NFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETF 409
D V +ALVDMY KCG + ++++F EI+ + +W +L+ A +G+ A++ +
Sbjct: 309 RVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLY 368
Query: 410 NEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGR 469
EM + G++ +A+TFV +L C+H G V +G F+SM + + V P+ EH +C+IDLL R
Sbjct: 369 YEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCR 428
Query: 470 AGKLKEVEDFINSM---PFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAH 526
AG L E E+ I+ M E +CS L A + +G+ + A+ A KL K+E +S AH
Sbjct: 429 AGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAH 488
Query: 527 VLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVED--WSHPRKKE 584
LL+++YA +WEDV +R+ ++D ++K PG S ++I H F V D SHP+ E
Sbjct: 489 TLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDE 548
Query: 585 IYEKLDSLLDQ 595
I +S+L Q
Sbjct: 549 I----NSMLHQ 555
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 208/415 (50%), Gaps = 38/415 (9%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ + ++++ + +++ +G+++H ++ G ++++N L+ +Y+ G+++ K+F
Sbjct: 45 DNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVF 104
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETA-SQFALSSVLQACASLGSI 133
D M +R++VSW +I+ + + RF +A+ F +M E + + S L AC++L ++
Sbjct: 105 DEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNL 164
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKC---------------------------- 165
+ G +++ VV + F + +G+ L DM+ KC
Sbjct: 165 EIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGY 223
Query: 166 ---GEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLC 222
G + +A +FE P KD VLWT+M++GYV+ F++AL ++ M T + D VL
Sbjct: 224 VSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLV 283
Query: 223 STLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGC 282
S L+ C A GK +H I + + +G AL D+Y+K G + +A VF
Sbjct: 284 SLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKE- 342
Query: 283 RNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHG-SL 341
R+ S+T+++ G +AL+ + ++ N G+ + TF +++ AC + + G +
Sbjct: 343 RDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKI 402
Query: 342 LHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVF 396
H + N S L+D+ + GL D + +L D++ +D TLV V+
Sbjct: 403 FHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESD---ETLVPVY 454
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 321 bits (823), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 178/596 (29%), Positives = 313/596 (52%), Gaps = 15/596 (2%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ + + C ++ G QL + +++ G + N + +YS+ G A ++F
Sbjct: 173 DAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVF 232
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFR-EALDTFCQMRAEGETASQFALSSVLQACASLGSI 133
D MS ++M+SW ++++G + F EA+ F M EG + +SV+ C +
Sbjct: 233 DEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDL 292
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
+ Q+H L +K G+ L +G+ L YSKCG + VF +M ++ V WT+MI
Sbjct: 293 KLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI--- 349
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
+ N + A+ + M D V+ ++ ++A + G +H + +K GF E
Sbjct: 350 --SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEP 407
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
+GN+ LY+K + A F+ D R I+S+ A++ G+ + +AL F+
Sbjct: 408 SVGNSFITLYAKFEALEDAKKAFE-DITFREIISWNAMISGFAQNGFSHEALKMFLSAAA 466
Query: 314 SGIEPNEFTFSSLIKACA--NQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLF 371
+ PNE+TF S++ A A ++ G H ++K + P VSSAL+DMY K G
Sbjct: 467 ETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNI 525
Query: 372 DHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGC 431
D S ++F+E+ N W +++ ++ HG + F++M+ + P+ VTF+++L C
Sbjct: 526 DESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTAC 585
Query: 432 SHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFG 491
+ GMV+ G F M ++Y + P EHY+C++D+LGRAG+LKE E+ ++ +P P
Sbjct: 586 NRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESM 645
Query: 492 WCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRD 551
S LG+C+ HG+ + A M+++PE SG++V + NIYA++ +W+ +RK +R
Sbjct: 646 LQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRK 705
Query: 552 GNMKKLPGYSWVDIGN-----ETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYV 602
N+ K G+SW+D+G+ F D SHP+ EIY ++ + ++ + G V
Sbjct: 706 KNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEGKV 761
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 240/490 (48%), Gaps = 15/490 (3%)
Query: 31 ELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMIT 90
+L +G Q+H G ++N ++ +Y K G D A+ +F+ + ++VSW +++
Sbjct: 91 DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILS 150
Query: 91 GFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGC 150
GF + + AL+ +M++ G F S+ L C G+Q+ VVK+G
Sbjct: 151 GFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLES 207
Query: 151 ELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFE-KALIAYKKM 209
+L +G++ MYS+ G A +VF+EM KD + W S++ G + G F +A++ ++ M
Sbjct: 208 DLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDM 267
Query: 210 VTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDM 269
+ + V +D S ++ C + +H + +K G+E +GN L YSK G +
Sbjct: 268 MREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVL 327
Query: 270 VSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKA 329
+ +VF S RN+VS+T ++ + A++ F+++R G+ PNE TF LI A
Sbjct: 328 EAVKSVFHQMSE-RNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINA 381
Query: 330 CANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAW 389
+++ G +HG +K F +P V ++ + +Y K + + + F++I +W
Sbjct: 382 VKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISW 441
Query: 390 NTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAG--MVEDGLNYFYSM 447
N ++ FAQ+G A++ F + PN TF ++L + A V+ G +
Sbjct: 442 NAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHL 500
Query: 448 DKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKER 507
K+ G+ + ++D+ + G + E E N M + F W S + A +HGD E
Sbjct: 501 LKL-GLNSCPVVSSALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGDFET 558
Query: 508 AKLAAYKLMK 517
+K++K
Sbjct: 559 VMNLFHKMIK 568
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 174/377 (46%), Gaps = 16/377 (4%)
Query: 70 AIKLFDRMSKRN-MVSWTAMITGFFRSLRFREALDTF---CQMRAEGETASQFALSSVLQ 125
A KLFD S+RN S I+ R AL F Q+ G + L L+
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 126 ACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVL 185
AC G ++ G Q+H SGF + + + + MY K G +A +FE + D V
Sbjct: 87 ACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 186 WTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIV 245
W +++ G+ N + AL +M + V D + LS C + F G L + +V
Sbjct: 145 WNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 246 KFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLE-KA 304
K G E + +GN+ +YS+SG A VF S ++++S+ +++ G + +A
Sbjct: 202 KTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMS-FKDMISWNSLLSGLSQEGTFGFEA 260
Query: 305 LNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDM 364
+ F D+ G+E + +F+S+I C ++ L+ +HG +K ++ V + L+
Sbjct: 261 VVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSR 320
Query: 365 YGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTF 424
Y KCG+ + +F ++ N +W T++ +A+ F M G+ PN VTF
Sbjct: 321 YSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTF 375
Query: 425 VNLLKGCSHAGMVEDGL 441
V L+ +++GL
Sbjct: 376 VGLINAVKCNEQIKEGL 392
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 10/204 (4%)
Query: 303 KALNAF---IDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS 359
+AL+ F + L G +E T +KAC + L+ G +HG F VS+
Sbjct: 58 RALSIFKENLQLGYFGRHMDEVTLCLALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSN 115
Query: 360 ALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKP 419
A++ MY K G FD+++ +F+ + +P+ +WNT++ F + + N + M G+
Sbjct: 116 AVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVV---RMKSAGVVF 172
Query: 420 NAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDF 479
+A T+ L C + GL ++ K G+ N I + R+G +
Sbjct: 173 DAFTYSTALSFCVGSEGFLLGLQLQSTVVKT-GLESDLVVGNSFITMYSRSGSFRGARRV 231
Query: 480 INSMPFEPTAFGWCSFLGACKTHG 503
+ M F+ W S L G
Sbjct: 232 FDEMSFKDM-ISWNSLLSGLSQEG 254
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/570 (30%), Positives = 306/570 (53%), Gaps = 9/570 (1%)
Query: 36 KQLHAQLIRGGCLPCT---FLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGF 92
KQ+H L+ FL+ L + + YA +L ++ ++ W ++I F
Sbjct: 18 KQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHF 77
Query: 93 FR--SLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGC 150
+L R + + MR G S+ +L+A L Q H +VK G
Sbjct: 78 SGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDS 136
Query: 151 ELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMV 210
+ F+ ++L YS G A ++F+ KD V WT+MIDG+V+NG+ +A++ + +M
Sbjct: 137 DPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK 196
Query: 211 TDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFG-FEYETFIGNALTDLYSKSGDM 269
V ++ + S L A ++ FG+S+H + ++ G + + FIG++L D+Y K
Sbjct: 197 KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCY 256
Query: 270 VSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKA 329
A VF + RN+V++TA++ GYV+ +K + F ++ S + PNE T SS++ A
Sbjct: 257 DDAQKVFD-EMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 330 CANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAW 389
CA+ L G +H ++K + + + + L+D+Y KCG + +I +F+ + N W
Sbjct: 316 CAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTW 375
Query: 390 NTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDK 449
++ FA HG R+A + F M+ + PN VTF+ +L C+H G+VE+G F SM
Sbjct: 376 TAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKG 435
Query: 450 IYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAK 509
+ + P+ +HY C++DL GR G L+E + I MP EPT W + G+C H D E K
Sbjct: 436 RFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGK 495
Query: 510 LAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNET 569
AA +++KL+P +SG + LL+N+Y++ + W++V +RK ++D + K PG+SW+++ +
Sbjct: 496 YAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKL 555
Query: 570 HVFGVEDWSHP-RKKEIYEKLDSLLDQIKI 598
F D P ++Y+ LD++ Q+++
Sbjct: 556 CEFIAFDDKKPLESDDLYKTLDTVGVQMRL 585
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 104/199 (52%), Gaps = 4/199 (2%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
+ K ++ ++ CA L +G+++H +I+ T L++LY KCG L+ AI +F
Sbjct: 305 NEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVF 364
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+R+ ++N+ +WTAMI GF R+A D F M + + ++ +VL ACA G ++
Sbjct: 365 ERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVE 424
Query: 135 FGVQVHCLVVKSGFGCELFLG--SNLTDMYSKCGEVSDACKVFEEMPCKD-EVLWTSMID 191
G ++ L +K F E + + D++ + G + +A + E MP + V+W ++
Sbjct: 425 EGRRLF-LSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFG 483
Query: 192 GYVKNGNFEKALIAYKKMV 210
+ + ++E A +++
Sbjct: 484 SCLLHKDYELGKYAASRVI 502
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 178/571 (31%), Positives = 315/571 (55%), Gaps = 10/571 (1%)
Query: 52 FLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAE 111
F+ + +++Y++ G+++ + ++FD +RN+ W MI + ++ E+++ F +
Sbjct: 252 FVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGS 311
Query: 112 GETASQFALSSVLQACA--SLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVS 169
E S ++ +L A A +L ++ G Q H V K+ + + ++L MYS+CG V
Sbjct: 312 KEIVSD-EVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVH 370
Query: 170 DACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACT 229
+ VF M +D V W +MI +V+NG ++ L+ +M ID + + LSA +
Sbjct: 371 KSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAAS 430
Query: 230 ALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQ-SDSGCRNIVSF 288
L+ GK HA +++ G ++E + + L D+YSKSG + + +F+ S R+ ++
Sbjct: 431 NLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATW 489
Query: 289 TAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVK 348
+++ GY + EK F + I PN T +S++ AC+ ++ G LHG ++
Sbjct: 490 NSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIR 549
Query: 349 FNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIET 408
D++ FV+SALVDMY K G ++ +F + + N + T++ + QHG+G AI
Sbjct: 550 QYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISL 609
Query: 409 FNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLG 468
F M + G+KP+A+TFV +L CS++G++++GL F M ++Y + P EHY CI D+LG
Sbjct: 610 FLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLG 669
Query: 469 RAGKLKEVEDFINSMPFEPT-AFGWCSFLGACKTHGDKERAKLAAYKLMKLEPEN--SGA 525
R G++ E +F+ + E A W S LG+CK HG+ E A+ + +L K + SG
Sbjct: 670 RVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGY 729
Query: 526 HVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEI 585
VLLSN+YA+E++W+ V +R+ +R+ +KK G S ++I + F D HP EI
Sbjct: 730 EVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEI 789
Query: 586 YEKLDSLLDQIKIVGYVPQTESVL--IEMDD 614
Y+ +D L ++ ++ +V +E+D+
Sbjct: 790 YDVIDGLAKDMRGDSFLTTLPTVTPSLELDE 820
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 135/519 (26%), Positives = 252/519 (48%), Gaps = 41/519 (7%)
Query: 14 CDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCT--FLTNHLLNLY------SKCG 65
CD+ + ++ CA+ K L GK +H LIR CL + + N L+N+Y C
Sbjct: 105 CDAYTYSSTLKACAETKNLKAGKAVHCHLIR--CLQNSSRVVHNSLMNMYVSCLNAPDCF 162
Query: 66 ELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQ 125
E D K+FD M ++N+V+W +I+ + ++ R EA F M S + +V
Sbjct: 163 EYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFP 222
Query: 126 ACASLGSIQFGVQVHCLVVKSG--FGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDE 183
A + SI+ + L++K G + +LF+ S+ MY++ G++ + +VF+ ++
Sbjct: 223 AVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNI 282
Query: 184 VLWTSMIDGYVKNGNFEKAL------IAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFG 237
+W +MI YV+N +++ I K++V+D V ++L + SA +AL+ G
Sbjct: 283 EVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEV---TYLLAA--SAVSALQQVELG 337
Query: 238 KSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVE 297
+ H + K E I N+L +YS+ G + + VF S R++VS+ ++ +V+
Sbjct: 338 RQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRE-RDVVSWNTMISAFVQ 396
Query: 298 MDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFV 357
++ L +++ G + + T ++L+ A +N E G H +++ + +
Sbjct: 397 NGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-M 455
Query: 358 SSALVDMYGKCGLFDHSIQLFD--EIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDR 415
+S L+DMY K GL S +LF+ + WN+++ + Q+G F +M+++
Sbjct: 456 NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQ 515
Query: 416 GLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEH------YNCIIDLLGR 469
++PNAVT ++L CS G V+ G +++G R+ + ++D+ +
Sbjct: 516 NIRPNAVTVASILPACSQIGSVDLG-------KQLHGFSIRQYLDQNVFVASALVDMYSK 568
Query: 470 AGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERA 508
AG +K ED S E + + + + HG ERA
Sbjct: 569 AGAIKYAEDMF-SQTKERNSVTYTTMILGYGQHGMGERA 606
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 214/484 (44%), Gaps = 53/484 (10%)
Query: 65 GELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMR--AEGETASQFALSS 122
G A +LFD + K V W +I GF + EAL + +M+ A + SS
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 123 VLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSD------ACKVFE 176
L+ACA +++ G VHC +++ + ++L +MY C D KVF+
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 177 EMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSF 236
M K+ V W ++I YVK G +A + M+ V + A + ++
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 237 GKSLHAIIVKFGFEY--ETFIGNALTDLYSKSGDMVSASNVFQSDSGC--RNIVSFTAIV 292
+ +++K G EY + F+ ++ +Y++ GD+ S+ VF S C RNI + ++
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDS---CVERNIEVWNTMI 289
Query: 293 DGYVEMDQLEKALNAFID-LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNF 351
YV+ D L +++ F++ + + I +E T+ A + ++E G HG V K NF
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSK-NF 348
Query: 352 DRDPFV-SSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFN 410
P V ++L+ MY +CG S +F + + +WNT++ F Q+GL +
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 411 EMVDRGLKPNAVTFVNLLKGCS-----------HAGMVEDGLNYFYSMDKIYGVMPREEH 459
EM +G K + +T LL S HA ++ G+ + E
Sbjct: 409 EMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQF-------------EGM 455
Query: 460 YNCIIDLLGRAGKLKEVEDFINSMPFEPTAFG------WCSFLGACKTHGDKERAKLAAY 513
+ +ID+ ++G ++ I+ FE + + W S + +G E+ L
Sbjct: 456 NSYLIDMYSKSGLIR-----ISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFR 510
Query: 514 KLMK 517
K+++
Sbjct: 511 KMLE 514
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
++ VA ++ C+Q + GKQLH IR F+ + L+++YSK G + YA +F
Sbjct: 520 NAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMF 579
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ +RN V++T MI G+ + A+ F M+ G +VL AC+ G I
Sbjct: 580 SQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLID 639
Query: 135 FGV-------QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEV--L 185
G+ +V+ + S C +TDM + G V++A + + + + + L
Sbjct: 640 EGLKIFEEMREVYNIQPSSEHYC------CITDMLGRVGRVNEAYEFVKGLGEEGNIAEL 693
Query: 186 WTSMIDGYVKNGNFEKA 202
W S++ +G E A
Sbjct: 694 WGSLLGSCKLHGELELA 710
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 318 bits (816), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 172/564 (30%), Positives = 307/564 (54%), Gaps = 3/564 (0%)
Query: 37 QLHAQLIR-GGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRS 95
Q+HA +I G L + ++ L+ + GE+ YA K+FD + +R + + +MI + R
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 96 LRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLG 155
E L + QM AE + ++AC S ++ G V C V G+ ++F+
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVC 154
Query: 156 SNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVF 215
S++ ++Y KCG++ +A +F +M +D + WT+M+ G+ + G KA+ Y++M +
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFG 214
Query: 216 IDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNV 275
D+ V+ L A L G+S+H + + G + +L D+Y+K G + AS V
Sbjct: 215 RDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRV 274
Query: 276 FQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAK 335
F S + VS+ +++ G+ + KA A +++++ G +P+ T ++ AC+
Sbjct: 275 F-SRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGS 333
Query: 336 LEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGV 395
L+ G L+H ++K + D ++AL+DMY KCG S ++F+ + + WNT++
Sbjct: 334 LKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISC 392
Query: 396 FAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMP 455
+ HG G+ + F +M + ++P+ TF +LL SH+G+VE G ++F M Y + P
Sbjct: 393 YGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQP 452
Query: 456 REEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKL 515
E+HY C+IDLL RAG+++E D INS + W + L C H + +AA K+
Sbjct: 453 SEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKI 512
Query: 516 MKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVE 575
++L P++ G L+SN +A +W++V +RK++R+G M+K+PGYS +++ E F +E
Sbjct: 513 LQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLME 572
Query: 576 DWSHPRKKEIYEKLDSLLDQIKIV 599
D SH + + L +L +I+ V
Sbjct: 573 DLSHHEHYHMLQVLRNLKTEIRDV 596
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 186/366 (50%), Gaps = 3/366 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS I+ C L KG+ + + + G F+ + +LNLY KCG++D A LF
Sbjct: 115 DSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF 174
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+M+KR+++ WT M+TGF ++ + +A++ + +M+ EG + + +LQA LG +
Sbjct: 175 GKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTK 234
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G VH + ++G + + ++L DMY+K G + A +VF M K V W S+I G+
Sbjct: 235 MGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFA 294
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+NG KA A +M + D L L AC+ + + G+ +H I+K +
Sbjct: 295 QNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRV 353
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
AL D+YSK G + S+ +F+ G +++V + ++ Y ++ ++ F+ + S
Sbjct: 354 TATALMDMYSKCGALSSSREIFE-HVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTES 412
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVV-KFNFDRDPFVSSALVDMYGKCGLFDH 373
IEP+ TF+SL+ A ++ +E G ++ K+ L+D+ + G +
Sbjct: 413 NIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEE 472
Query: 374 SIQLFD 379
++ + +
Sbjct: 473 ALDMIN 478
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 278/538 (51%), Gaps = 65/538 (12%)
Query: 120 LSSVLQACASLGSIQFGVQVHCLVVKSGFG-CELFLGSNLTDMYSKCGEVSDACKVFEEM 178
L+S+LQ C S++ G +H + +GF L ++L MY KCG+ DACKVF++M
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 179 -------------------------------PCKDEVLWTSMIDGYVKNGNFEKALIAYK 207
P +D V W +M+ GY ++GN +AL YK
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 208 KMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSG 267
+ + ++ L+AC + + H ++ GF + ++ D Y+K G
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 268 DMVSASNVFQS------------------------------DSGCRNIVSFTAIVDGYVE 297
M SA F + +N VS+TA++ GYV
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 298 MDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFV 357
+AL+ F + G++P +FTFSS + A A+ A L HG +HG +++ N + V
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIV 348
Query: 358 SSALVDMYGKCGLFDHSIQLFDEIENPNDTA-WNTLVGVFAQHGLGRNAIETFNEMVDRG 416
S+L+DMY K G + S ++F ++ +D WNT++ AQHGLG A+ ++M+
Sbjct: 349 ISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFR 408
Query: 417 LKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEV 476
++PN T V +L CSH+G+VE+GL +F SM +G++P +EHY C+IDLLGRAG KE+
Sbjct: 409 VQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKEL 468
Query: 477 EDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKE 536
I MPFEP W + LG C+ HG++E K AA +L+KL+PE+S ++LLS+IYA
Sbjct: 469 MRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADH 528
Query: 537 RQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWS--HPRKKEIYEKLDSL 592
+WE V LR +++ + K SW++I + F V D S H RK+EIY L +L
Sbjct: 529 GKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 207/459 (45%), Gaps = 68/459 (14%)
Query: 19 VAQLIQTCAQAKELSKGKQLHAQL-IRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM 77
+A L+Q C K L +GK +H L I G P T L+NHL+ +Y KCG+ A K+FD+M
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 78 SKRNMVSWTAMITGFFRS---LRFR----------------------------EALDTFC 106
RN+ SW M++G+ +S +R R EAL +
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 107 QMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCG 166
+ R G ++F+ + +L AC +Q Q H V+ +GF + L ++ D Y+KCG
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 167 EVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFE-------------------------- 200
++ A + F+EM KD +WT++I GY K G+ E
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 201 -----KALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFI 255
+AL ++KM+ V +Q S L A ++ + GK +H +++ +
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIV 348
Query: 256 GNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSG 315
++L D+YSKSG + ++ VF+ + V + ++ + KAL D+
Sbjct: 349 ISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFR 408
Query: 316 IEPNEFTFSSLIKACANQAKLEHG-SLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
++PN T ++ AC++ +E G V+ D + L+D+ G+ G F
Sbjct: 409 VQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKEL 468
Query: 375 IQLFDEIE-NPNDTAWNTLVGVFAQHG---LGRNAIETF 409
++ +E+ P+ WN ++GV HG LG+ A +
Sbjct: 469 MRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADEL 507
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Query: 278 SDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLE 337
S+ R I + + + +L +A++ L GI +SL++ C + L+
Sbjct: 4 SNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLK 63
Query: 338 HGSLLHGQVVKFNFDR-DPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVF 396
G +H + F R + +S+ L+ MY KCG + ++FD++ N +WN +V +
Sbjct: 64 QGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGY 123
Query: 397 AQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGV 453
+ G+ A F+ M +R + V++ ++ G + G + + L +FY + G+
Sbjct: 124 VKSGMLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEAL-WFYKEFRRSGI 175
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 212/681 (31%), Positives = 331/681 (48%), Gaps = 50/681 (7%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK-- 79
L+ C K + +L ++ + G P N L+ Y++ G+ D A+ L +M
Sbjct: 254 LLAYCQNGKH-EEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFG 312
Query: 80 --RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
++ +WTAMI+G + +ALD F +M G + + S + AC+ L I G
Sbjct: 313 ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGS 372
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNG 197
+VH + VK GF ++ +G++L DMYSKCG++ DA KVF+ + KD W SMI GY + G
Sbjct: 373 EVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAG 432
Query: 198 NFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGN 257
KA + +M N L I+ + N
Sbjct: 433 YCGKAYELFTRMQDAN--------------------------LRPNIITW---------N 457
Query: 258 ALTDLYSKSGDMVSASNVFQ---SDSGC-RNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
+ Y K+GD A ++FQ D RN ++ I+ GY++ + ++AL F ++
Sbjct: 458 TMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQF 517
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
S PN T SL+ ACAN + +HG V++ N D V +AL D Y K G ++
Sbjct: 518 SRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEY 577
Query: 374 SIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSH 433
S +F +E + WN+L+G + HG A+ FN+M +G+ PN T +++
Sbjct: 578 SRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGL 637
Query: 434 AGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWC 493
G V++G FYS+ Y ++P EH + ++ L GRA +L+E FI M + W
Sbjct: 638 MGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWE 697
Query: 494 SFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGN 553
SFL C+ HGD + A AA L LEPEN+ ++S IYA + K RD
Sbjct: 698 SFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNL 757
Query: 554 MKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMD 613
+KK G SW+++ N H F D S K + L L++++ + + + ++
Sbjct: 758 LKKPLGQSWIEVRNLIHTFTTGDQS----KLCTDVLYPLVEKMSRLDNRSDQYNGELWIE 813
Query: 614 DTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVK--KNLRVCSDCHSAFKYISKVTERNII 671
+ +E+ HSE+ A+A+ L+ S ++ KNLR+C DCH KY+SK +I+
Sbjct: 814 EEGREETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDIL 873
Query: 672 VRDISRFHHFSNGSCSCGDYW 692
+ D HHF NG CSC DYW
Sbjct: 874 LEDTRCLHHFKNGDCSCKDYW 894
Score = 208 bits (530), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 229/493 (46%), Gaps = 58/493 (11%)
Query: 21 QLIQTCAQAKELSKGKQLHAQLIRGGCL--PCTFLTNHLLNLYSKCGELDYAIKLFDRMS 78
+L+++C + + G+ LHA R G P F+ LL++Y+KCG + A K+FD M
Sbjct: 86 KLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMR 142
Query: 79 KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ 138
+RN+ +W+AMI + R R+RE F M +G F +LQ CA+ G ++ G
Sbjct: 143 ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKV 202
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGN 198
+H +V+K G L + +++ +Y+KCGE+ A K F M +D + W S++ Y +NG
Sbjct: 203 IHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGK 262
Query: 199 FEKALIAYKKM---------VTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF 249
E+A+ K+M VT N+ I + + L C
Sbjct: 263 HEEAVELVKEMEKEGISPGLVTWNILIGGY---NQLGKC--------------------- 298
Query: 250 EYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFI 309
+A DL K ++VF ++TA++ G + +AL+ F
Sbjct: 299 -------DAAMDLMQKMETFGITADVF----------TWTAMISGLIHNGMRYQALDMFR 341
Query: 310 DLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCG 369
+ +G+ PN T S + AC+ + GS +H VK F D V ++LVDMY KCG
Sbjct: 342 KMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCG 401
Query: 370 LFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLK 429
+ + ++FD ++N + WN+++ + Q G A E F M D L+PN +T+ ++
Sbjct: 402 KLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS 461
Query: 430 GCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFE--- 486
G G + ++ F M+K V +N II + GK E + M F
Sbjct: 462 GYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFM 521
Query: 487 PTAFGWCSFLGAC 499
P + S L AC
Sbjct: 522 PNSVTILSLLPAC 534
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 138/550 (25%), Positives = 238/550 (43%), Gaps = 99/550 (18%)
Query: 6 LFRFRHK---LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYS 62
LFR K L D +++Q CA ++ GK +H+ +I+ G C ++N +L +Y+
Sbjct: 168 LFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 63 KCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSS 122
KCGELD+A K F RM +R++++W +++ + ++ + EA++ +M EG + +
Sbjct: 228 KCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNI 287
Query: 123 VLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKD 182
++ LG KC D + E
Sbjct: 288 LIGGYNQLG--------------------------------KCDAAMDLMQKMETFGITA 315
Query: 183 EVL-WTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLH 241
+V WT+MI G + NG +AL ++KM V + + S +SAC+ LK + G +H
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 242 AIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQL 301
+I VK GF + +GN+L D+YSK G + A VF S +++ ++ +++ GY +
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN-KDVYTWNSMITGYCQAGYC 434
Query: 302 EKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSAL 361
KA F ++++ + PN T++++I
Sbjct: 435 GKAYELFTRMQDANLRPNIITWNTMISG-------------------------------- 462
Query: 362 VDMYGKCGLFDHSIQLFDEIENP-----NDTAWNTLVGVFAQHGLGRNAIETFNEMVDRG 416
Y K G ++ LF +E N WN ++ + Q+G A+E F +M
Sbjct: 463 ---YIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSR 519
Query: 417 LKPNAVTFVNLLKGCSH---AGMVED--GLNYFYSMDKIYGVMPREEHYNCIIDLLGRAG 471
PN+VT ++LL C++ A MV + G ++D I+ V N + D ++G
Sbjct: 520 FMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVK------NALTDTYAKSG 573
Query: 472 KLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLE--PENSG----- 524
++ M + W S +G HG A LA + MK + N G
Sbjct: 574 DIEYSRTIFLGMETKDI-ITWNSLIGGYVLHGSYGPA-LALFNQMKTQGITPNRGTLSSI 631
Query: 525 --AHVLLSNI 532
AH L+ N+
Sbjct: 632 ILAHGLMGNV 641
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 10/314 (3%)
Query: 191 DGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF- 249
D +NG+ +A A + + + L +C + G+ LHA +FG
Sbjct: 54 DYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLF 110
Query: 250 -EYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAF 308
E + F+ L +Y+K G + A VF S RN+ +++A++ Y ++ + F
Sbjct: 111 TEPDVFVETKLLSMYAKCGCIADARKVFDSMRE-RNLFTWSAMIGAYSRENRWREVAKLF 169
Query: 309 IDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKC 368
+ G+ P++F F +++ CAN +E G ++H V+K VS++++ +Y KC
Sbjct: 170 RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC 229
Query: 369 GLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLL 428
G D + + F + + AWN+++ + Q+G A+E EM G+ P VT+ L+
Sbjct: 230 GELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI 289
Query: 429 KGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFE-- 486
G + G + ++ M+ +G+ + +I L G + D M
Sbjct: 290 GGYNQLGKCDAAMDLMQKME-TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV 348
Query: 487 -PTAFGWCSFLGAC 499
P A S + AC
Sbjct: 349 VPNAVTIMSAVSAC 362
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 103/211 (48%), Gaps = 5/211 (2%)
Query: 6 LFR---FRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYS 62
LFR F + +S + L+ CA +++H ++R + N L + Y+
Sbjct: 511 LFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYA 570
Query: 63 KCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSS 122
K G+++Y+ +F M +++++W ++I G+ + AL F QM+ +G T ++ LSS
Sbjct: 571 KSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSS 630
Query: 123 VLQACASLGSIQFGVQV-HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK 181
++ A +G++ G +V + + L S + +Y + + +A + +EM +
Sbjct: 631 IILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQ 690
Query: 182 DEV-LWTSMIDGYVKNGNFEKALIAYKKMVT 211
E +W S + G +G+ + A+ A + + +
Sbjct: 691 SETPIWESFLTGCRIHGDIDMAIHAAENLFS 721
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/518 (33%), Positives = 280/518 (54%), Gaps = 6/518 (1%)
Query: 49 PCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQM 108
P + N L++ Y K G +D A+ LF RM + N+VSW +I+GF R AL+ +M
Sbjct: 171 PSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRM 229
Query: 109 RAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEV 168
+ EG FAL L+AC+ G + G Q+HC VVKSG F S L DMYS CG +
Sbjct: 230 QREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSL 289
Query: 169 SDACKVF--EEMPCKDEV-LWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTL 225
A VF E++ V +W SM+ G++ N E AL ++ ++ D + L L
Sbjct: 290 IYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGAL 349
Query: 226 SACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNI 285
C G +H+++V G+E + +G+ L DL++ G++ A +F ++I
Sbjct: 350 KICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPN-KDI 408
Query: 286 VSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQ 345
++F+ ++ G V+ A F +L G++ ++F S+++K C++ A L G +HG
Sbjct: 409 IAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGL 468
Query: 346 VVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNA 405
+K ++ +P ++ALVDMY KCG D+ + LFD + + +W ++ F Q+G A
Sbjct: 469 CIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEA 528
Query: 406 IETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIID 465
F++M++ G++PN VTF+ LL C H+G++E+ + +M YG+ P EHY C++D
Sbjct: 529 FRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVD 588
Query: 466 LLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGA 525
LLG+AG +E + IN MP EP W S L AC TH + + A KL+K P++
Sbjct: 589 LLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSV 648
Query: 526 HVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWV 563
+ LSN YA W+ + +R+ + K+ G SW+
Sbjct: 649 YTSLSNAYATLGMWDQLSKVREAAKKLGAKE-SGMSWI 685
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 145/576 (25%), Positives = 259/576 (44%), Gaps = 71/576 (12%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D K +A ++ C + + +G+ + A +I+ G F+ N+++++Y L A K+F
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQM-RAEGETASQFALSSVLQACASLGSI 133
D MS+RN+V+WT M++G+ + +A++ + +M +E E A++F S+VL+AC +G I
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
Q G+ V+ + K ++ L +++ DMY K G + +A F+E+ W ++I GY
Sbjct: 124 QLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGY 183
Query: 194 VKNGNFEKALIAYKKMVTDNV------------------------------FIDQHVLCS 223
K G ++A+ + +M NV +D L
Sbjct: 184 CKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPC 243
Query: 224 TLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCR 283
L AC+ + GK LH +VK G E F +AL D+YS G ++ A++VF +
Sbjct: 244 GLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAV 303
Query: 284 N--IVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSL 341
N + + +++ G++ ++ E AL + + S + + +T S +K C N L G
Sbjct: 304 NSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ 363
Query: 342 LHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGL 401
+H VV ++ D V S LVD++ G + +LF + N + A++ L+ + G
Sbjct: 364 VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGF 423
Query: 402 GRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG-------LNYFYSMDKIYGVM 454
A F E++ GL + N+LK CS + G + Y + +
Sbjct: 424 NSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATA 483
Query: 455 PREEHYNC-----------------------IIDLLGRAGKLKEVEDFINSM---PFEPT 488
+ + C II G+ G+++E + + M EP
Sbjct: 484 LVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPN 543
Query: 489 AFGWCSFLGACKTHGDKERAKLAAYKLMK----LEP 520
+ L AC+ G E A+ + + MK LEP
Sbjct: 544 KVTFLGLLSACRHSGLLEEAR-STLETMKSEYGLEP 578
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 115/218 (52%), Gaps = 6/218 (2%)
Query: 214 VFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSAS 273
+ +D ++ + L C ++AF G+S+ A ++K G FI N + +Y + A
Sbjct: 1 MVMDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAH 60
Query: 274 NVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIE-PNEFTFSSLIKACAN 332
VF S RNIV++T +V GY + KA+ + + +S E NEF +S+++KAC
Sbjct: 61 KVFDEMSE-RNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGL 119
Query: 333 QAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTL 392
++ G L++ ++ K N D + +++VDMY K G + F EI P+ T+WNTL
Sbjct: 120 VGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTL 179
Query: 393 VGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKG 430
+ + + GL A+ F+ M +PN V++ L+ G
Sbjct: 180 ISGYCKAGLMDEAVTLFHRMP----QPNVVSWNCLISG 213
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 98/191 (51%), Gaps = 7/191 (3%)
Query: 6 LFRFRHKL---CDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYS 62
LFR KL D V+ +++ C+ L GKQ+H I+ G L+++Y
Sbjct: 430 LFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYV 489
Query: 63 KCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSS 122
KCGE+D + LFD M +R++VSWT +I GF ++ R EA F +M G ++
Sbjct: 490 KCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLG 549
Query: 123 VLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSN--LTDMYSKCGEVSDACKVFEEMPC 180
+L AC G ++ + +KS +G E +L + D+ + G +A ++ +MP
Sbjct: 550 LLSACRHSGLLE-EARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPL 608
Query: 181 K-DEVLWTSMI 190
+ D+ +WTS++
Sbjct: 609 EPDKTIWTSLL 619
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/461 (36%), Positives = 253/461 (54%), Gaps = 6/461 (1%)
Query: 237 GKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYV 296
G +H I GF ++ + L DLYS + A VF R+ VS+ + Y+
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPK-RDTVSWNVLFSCYL 190
Query: 297 EMDQLEKALNAFIDLRN---SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDR 353
+ L F ++N ++P+ T ++ACAN L+ G +H + +
Sbjct: 191 RNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSG 250
Query: 354 DPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMV 413
+S+ LV MY +CG D + Q+F + N +W L+ A +G G+ AIE FNEM+
Sbjct: 251 ALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEML 310
Query: 414 DRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDK-IYGVMPREEHYNCIIDLLGRAGK 472
G+ P T LL CSH+G+V +G+ +F M + + P HY C++DLLGRA
Sbjct: 311 KFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARL 370
Query: 473 LKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNI 532
L + I SM +P + W + LGAC+ HGD E + L++L+ E +G +VLL N
Sbjct: 371 LDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNT 430
Query: 533 YAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSL 592
Y+ +WE V LR ++++ + PG S +++ H F V+D SHPRK+EIY+ L +
Sbjct: 431 YSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEI 490
Query: 593 LDQIKIVGYVPQTESVLIEMD-DTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRV 651
Q+KI GYV + S L ++ + K L HSE++A+A+ +LV+P G I V KNLR
Sbjct: 491 NQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRT 550
Query: 652 CSDCHSAFKYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
C DCH+ K++S V +R +IVRD SRFHHF GSCSC D+W
Sbjct: 551 CVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 180/392 (45%), Gaps = 18/392 (4%)
Query: 36 KQLHAQLIRGGCLPCT-----FLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMIT 90
+Q+HA L+R + + FL+ L+L + +++Y+ ++F + + MI
Sbjct: 28 RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPR--DINYSCRVFSQRLNPTLSHCNTMIR 85
Query: 91 GFFRSLRFREALDTFCQMRAEGE-TASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFG 149
F S E F +R A+ + S L+ C G + G+Q+H + GF
Sbjct: 86 AFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFL 145
Query: 150 CELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKM 209
+ L + L D+YS C +DACKVF+E+P +D V W + Y++N L+ + KM
Sbjct: 146 SDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKM 205
Query: 210 VTDN---VFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKS 266
D V D L AC L A FGK +H I + G + N L +YS+
Sbjct: 206 KNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRC 265
Query: 267 GDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSL 326
G M A VF RN+VS+TA++ G ++A+ AF ++ GI P E T + L
Sbjct: 266 GSMDKAYQVFYGMRE-RNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGL 324
Query: 327 IKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFDHSIQLFDEIE-N 383
+ AC++ + G + ++ F P + +VD+ G+ L D + L +E
Sbjct: 325 LSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMK 384
Query: 384 PNDTAWNTLVGVFAQHG---LGRNAIETFNEM 412
P+ T W TL+G HG LG I E+
Sbjct: 385 PDSTIWRTLLGACRVHGDVELGERVISHLIEL 416
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 116/210 (55%), Gaps = 3/210 (1%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM 82
++ C ++ +L G Q+H ++ G L + L L++LYS C A K+FD + KR+
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT 179
Query: 83 VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQ---FALSSVLQACASLGSIQFGVQV 139
VSW + + + R+ R R+ L F +M+ + + + LQACA+LG++ FG QV
Sbjct: 180 VSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQV 239
Query: 140 HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNF 199
H + ++G L L + L MYS+CG + A +VF M ++ V WT++I G NG
Sbjct: 240 HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFG 299
Query: 200 EKALIAYKKMVTDNVFIDQHVLCSTLSACT 229
++A+ A+ +M+ + ++ L LSAC+
Sbjct: 300 KEAIEAFNEMLKFGISPEEQTLTGLLSACS 329
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 11/185 (5%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM 82
+Q CA L GKQ+H + G L+N L+++YS+CG +D A ++F M +RN+
Sbjct: 224 LQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNV 283
Query: 83 VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCL 142
VSWTA+I+G + +EA++ F +M G + + L+ +L AC+ G + G+
Sbjct: 284 VSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDR 343
Query: 143 VVKSGFGCELFLGSNL------TDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMIDGYVK 195
++SG E + NL D+ + + A + + M K D +W +++
Sbjct: 344 -MRSG---EFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRV 399
Query: 196 NGNFE 200
+G+ E
Sbjct: 400 HGDVE 404
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 166/535 (31%), Positives = 275/535 (51%), Gaps = 36/535 (6%)
Query: 35 GKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFR 94
GKQ+H +R G L N LL +Y+K +++ A +F M + N+VSW MI GF +
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 327
Query: 95 SLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFL 154
R ++++ +MR G ++ SVL AC G ++ G
Sbjct: 328 EYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR----------------- 370
Query: 155 GSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNV 214
++F +P W +M+ GY ++E+A+ +++M N+
Sbjct: 371 ------------------RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNL 412
Query: 215 FIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASN 274
D+ L LS+C L+ GK +H ++++ + I + L +YS+ M +
Sbjct: 413 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC 472
Query: 275 VFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIE-PNEFTFSSLIKACANQ 333
+F +I + +++ G+ KAL F + + + PNE +F++++ +C+
Sbjct: 473 IFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRL 532
Query: 334 AKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLV 393
L HG HG VVK + D FV +AL DMY KCG D + Q FD + N WN ++
Sbjct: 533 CSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMI 592
Query: 394 GVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGV 453
+ +G G A+ + +M+ G KP+ +TFV++L CSH+G+VE GL SM +I+G+
Sbjct: 593 HGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGI 652
Query: 454 MPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAY 513
P +HY CI+D LGRAG+L++ E + P++ ++ W L +C+ HGD A+ A
Sbjct: 653 EPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAE 712
Query: 514 KLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNE 568
KLM+L+P++S A+VLLSN Y+ RQW+D L+ ++ + K PG SW GN+
Sbjct: 713 KLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGND 767
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 225/484 (46%), Gaps = 84/484 (17%)
Query: 16 SKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFD 75
+K +A L++ + GK +H ++R G T+L N LL+LY +CG+ DYA K+FD
Sbjct: 6 NKYLASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFD 65
Query: 76 RMS-------------------------------KRNMVSWTAMITGFFRSLRFREALDT 104
MS +R++VSW MI+ R +AL
Sbjct: 66 EMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVV 125
Query: 105 FCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSK 164
+ +M +G S+F L+SVL AC+ + FG++ H + VK+G +F+G+ L MY+K
Sbjct: 126 YKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAK 185
Query: 165 CGEVSD-ACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCS 223
CG + D +VFE + +EV +T++I G + +A+ ++ M V +D L +
Sbjct: 186 CGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSN 245
Query: 224 TLS------ACTALKAF---SFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASN 274
LS C +L GK +H + ++ GF + + N+L ++Y+K+ DM A
Sbjct: 246 ILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAEL 305
Query: 275 VFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQA 334
+F ++ N+VS+ ++ G+ + + +K++ +R+SG +PNE T S++ AC
Sbjct: 306 IF-AEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSG 364
Query: 335 KLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVG 394
+E G ++F I P+ +AWN ++
Sbjct: 365 DVETGR-----------------------------------RIFSSIPQPSVSAWNAMLS 389
Query: 395 VFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVM 454
++ + AI F +M + LKP+ T +L C+ +E G +I+GV+
Sbjct: 390 GYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGG-------KQIHGVV 442
Query: 455 PREE 458
R E
Sbjct: 443 IRTE 446
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 215/448 (47%), Gaps = 55/448 (12%)
Query: 4 RNLFRFRHKLCDSK-----AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLL 58
+ L ++ +CD +A ++ C++ + G + H ++ G F+ N LL
Sbjct: 121 KALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALL 180
Query: 59 NLYSKCGEL-DYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQ 117
++Y+KCG + DY +++F+ +S+ N VS+TA+I G R + EA+ F M +G
Sbjct: 181 SMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDS 240
Query: 118 FALSSVL------QACASLGSI---QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEV 168
LS++L + C SL I + G Q+HCL ++ GFG +L L ++L ++Y+K ++
Sbjct: 241 VCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDM 300
Query: 169 SDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLC-STLSA 227
+ A +F EMP + V W MI G+ + +K++ +M D+ F V C S L A
Sbjct: 301 NGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRM-RDSGFQPNEVTCISVLGA 359
Query: 228 CTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVS 287
C +SGD+ + +F S ++ +
Sbjct: 360 CF-----------------------------------RSGDVETGRRIFSSIPQ-PSVSA 383
Query: 288 FTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVV 347
+ A++ GY + E+A++ F ++ ++P++ T S ++ +CA LE G +HG V+
Sbjct: 384 WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVI 443
Query: 348 KFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTA-WNTLVGVFAQHGLGRNAI 406
+ ++ + S L+ +Y +C + S +FD+ N D A WN+++ F + L A+
Sbjct: 444 RTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKAL 503
Query: 407 ETFNEMVDRG-LKPNAVTFVNLLKGCSH 433
F M L PN +F +L CS
Sbjct: 504 ILFRRMHQTAVLCPNETSFATVLSSCSR 531
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 137/246 (55%), Gaps = 9/246 (3%)
Query: 7 FRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGE 66
+F++ D ++ ++ +CA+ + L GKQ+H +IR + + + L+ +YS+C +
Sbjct: 407 MQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEK 466
Query: 67 LDYAIKLFDR-MSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET-ASQFALSSVL 124
++ + +FD +++ ++ W +MI+GF ++ +AL F +M ++ + ++VL
Sbjct: 467 MEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVL 526
Query: 125 QACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEV 184
+C+ L S+ G Q H LVVKSG+ + F+ + LTDMY KCGE+ A + F+ + K+ V
Sbjct: 527 SSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTV 586
Query: 185 LWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSAC-------TALKAFSFG 237
+W MI GY NG ++A+ Y+KM++ D S L+AC T L+ S
Sbjct: 587 IWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSM 646
Query: 238 KSLHAI 243
+ +H I
Sbjct: 647 QRIHGI 652
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 161/386 (41%), Gaps = 77/386 (19%)
Query: 237 GKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTA------ 290
GK +H IV+ G + +T++ N L DLY + GD A VF S R++ S+ A
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS-VRDVYSWNAFLTFRC 83
Query: 291 ----------IVDGYVEMDQL---------------EKALNAFIDLRNSGIEPNEFTFSS 325
+ DG E D + EKAL + + G P+ FT +S
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 326 LIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCG-LFDHSIQLFDEIENP 384
++ AC+ G HG VK D++ FV +AL+ MY KCG + D+ +++F+ + P
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 385 NDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLL------KGCSHAGMV- 437
N+ ++ ++G A+ A++ F M ++G++ ++V N+L +GC +
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 438 -----------------------EDGLNYFYSMDK-------IYGVMPREE--HYNCIID 465
+ L Y+ +K I+ MP +N +I
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 466 LLGRAGKLKEVEDFINSM---PFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPEN 522
G+ + + +F+ M F+P S LGAC GD E + + +P
Sbjct: 324 GFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP--QPSV 381
Query: 523 SGAHVLLSNIYAKERQWEDVRCLRKM 548
S + +LS E E + R+M
Sbjct: 382 SAWNAMLSGYSNYEHYEEAISNFRQM 407
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 177/546 (32%), Positives = 284/546 (52%), Gaps = 16/546 (2%)
Query: 27 AQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWT 86
A LS KQ H +++ G FL N LL Y+K E D A KLFD M RN+V+W
Sbjct: 47 ASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWN 106
Query: 87 AMITGFFR---SLRFREALDTFCQMRA---EGETASQFALSSVLQACASLGSIQFGVQVH 140
+I G + R L FC + + + +++ C +++ G+Q+H
Sbjct: 107 ILIHGVIQRDGDTNHRAHLG-FCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLH 165
Query: 141 CLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFE 200
CL+VK G F ++L Y KCG + +A +VFE + +D VLW +++ YV NG +
Sbjct: 166 CLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMID 225
Query: 201 KALIAYKKMVTD-NVFI-DQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNA 258
+A K M +D N F D S LSAC + GK +HAI+ K ++++ + A
Sbjct: 226 EAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQ----GKQIHAILFKVSYQFDIPVATA 281
Query: 259 LTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEP 318
L ++Y+KS + A F+S RN+VS+ A++ G+ + + +A+ F + ++P
Sbjct: 282 LLNMYAKSNHLSDARECFES-MVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQP 340
Query: 319 NEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLF 378
+E TF+S++ +CA + + + V K V+++L+ Y + G ++ F
Sbjct: 341 DELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCF 400
Query: 379 DEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVE 438
I P+ +W +++G A HG +++ F M+ + L+P+ +TF+ +L CSH G+V+
Sbjct: 401 HSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQ 459
Query: 439 DGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGA 498
+GL F M + Y + +EHY C+IDLLGRAG + E D +NSMP EP+ +F G
Sbjct: 460 EGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGG 519
Query: 499 CKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKM-IRDGNMKKL 557
C H +E K A KL+++EP + +LSN Y E W LRK R+ K
Sbjct: 520 CNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKT 579
Query: 558 PGYSWV 563
PG SW+
Sbjct: 580 PGCSWL 585
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D A ++ +CA+ + + KQ+ A + + G + N L++ YS+ G L A+ F
Sbjct: 341 DELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCF 400
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ + ++VSWT++I E+L F M + + + VL AC+ G +Q
Sbjct: 401 HSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQ-PDKITFLEVLSACSHGGLVQ 459
Query: 135 FGVQVHCLVVKSGF---GCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK 181
G++ C + F E + L D+ + G + +A V MP +
Sbjct: 460 EGLR--CFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTE 507
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 171/572 (29%), Positives = 296/572 (51%), Gaps = 4/572 (0%)
Query: 24 QTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMV 83
+ CA+ ++ + +HA LI+ F+ ++++ KC +DYA K+F+RM +R+
Sbjct: 60 KACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDAT 119
Query: 84 SWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLV 143
+W AM++GF +S +A F +MR T + +++Q+ + S++ +H +
Sbjct: 120 TWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVG 179
Query: 144 VKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDE--VLWTSMIDGYVKNGNFEK 201
++ G ++ + + Y KCG++ A VFE + D V W SM Y G
Sbjct: 180 IRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFD 239
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
A Y M+ + D + ++C + + G+ +H+ + G + + N
Sbjct: 240 AFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFIS 299
Query: 262 LYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEF 321
+YSKS D SA +F + R VS+T ++ GY E +++AL F + SG +P+
Sbjct: 300 MYSKSEDTCSARLLFDIMTS-RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLV 358
Query: 322 TFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDP-FVSSALVDMYGKCGLFDHSIQLFDE 380
T SLI C LE G + + + RD + +AL+DMY KCG + +FD
Sbjct: 359 TLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDN 418
Query: 381 IENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG 440
W T++ +A +G+ A++ F++M+D KPN +TF+ +L+ C+H+G +E G
Sbjct: 419 TPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG 478
Query: 441 LNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACK 500
YF+ M ++Y + P +HY+C++DLLGR GKL+E + I +M +P A W + L ACK
Sbjct: 479 WEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACK 538
Query: 501 THGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGY 560
H + + A+ AA L LEP+ + +V ++NIYA W+ +R +++ N+KK PG
Sbjct: 539 IHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGE 598
Query: 561 SWVDIGNETHVFGVEDWSHPRKKEIYEKLDSL 592
S + + + H F V + H + IY L+ L
Sbjct: 599 SVIQVNGKNHSFTVGEHGHVENEVIYFTLNGL 630
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 197/407 (48%), Gaps = 6/407 (1%)
Query: 100 EALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLT 159
E+L F +M+ G + F V +ACA L + VH ++KS F ++F+G+
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 160 DMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQH 219
DM+ KC V A KVFE MP +D W +M+ G+ ++G+ +KA +++M + + D
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154
Query: 220 VLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS- 278
+ + + + + K+ +++HA+ ++ G + + + N Y K GD+ SA VF++
Sbjct: 155 TVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAI 214
Query: 279 DSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEH 338
D G R +VS+ ++ Y + A + + +P+ TF +L +C N L
Sbjct: 215 DRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQ 274
Query: 339 GSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQ 398
G L+H + D+D + + MY K + LFD + + +W ++ +A+
Sbjct: 275 GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAE 334
Query: 399 HGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREE 458
G A+ F+ M+ G KP+ VT ++L+ GC G +E G + + IYG R+
Sbjct: 335 KGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG-KWIDARADIYGC-KRDN 392
Query: 459 HY--NCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHG 503
N +ID+ + G + E D ++ P E T W + + +G
Sbjct: 393 VMICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAGYALNG 438
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 202/439 (46%), Gaps = 17/439 (3%)
Query: 8 RFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGEL 67
R DS V LIQ+ + K L + +HA IR G + N ++ Y KCG+L
Sbjct: 145 RLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDL 204
Query: 68 DYAIKLFDRMSK--RNMVSWTAMITGFFRSLRFREALDTF---CQMRAEGETASQFALSS 122
D A +F+ + + R +VSW +M + F EA D F C M E +
Sbjct: 205 DSAKLVFEAIDRGDRTVVSWNSMFKAY---SVFGEAFDAFGLYCLMLREEFKPDLSTFIN 261
Query: 123 VLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKD 182
+ +C + ++ G +H + G ++ + MYSK + A +F+ M +
Sbjct: 262 LAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRT 321
Query: 183 EVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHA 242
V WT MI GY + G+ ++AL + M+ D L S +S C + GK + A
Sbjct: 322 CVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDA 381
Query: 243 IIVKFGFEYE-TFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQL 301
+G + + I NAL D+YSK G + A ++F ++ + +V++T ++ GY
Sbjct: 382 RADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFD-NTPEKTVVTWTTMIAGYALNGIF 440
Query: 302 EKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--S 359
+AL F + + +PN TF ++++ACA+ LE G + ++K ++ P + S
Sbjct: 441 LEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG-WEYFHIMKQVYNISPGLDHYS 499
Query: 360 ALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLK 418
+VD+ G+ G + +++L + P+ W L+ H + A + + + L+
Sbjct: 500 CMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFN--LE 557
Query: 419 PN-AVTFVNLLKGCSHAGM 436
P A +V + + AGM
Sbjct: 558 PQMAAPYVEMANIYAAAGM 576
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 160/364 (43%), Gaps = 46/364 (12%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D L +C + L++G+ +H+ I G N +++YSK + A LF
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
D M+ R VSWT MI+G+ EAL F M GE L S++ C GS++
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 135 FGVQVHCLVVKSGFGCE---LFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMID 191
G + +GC+ + + + L DMYSKCG + +A +F+ P K V WT+MI
Sbjct: 375 TGKWIDARA--DIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIA 432
Query: 192 GYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEY 251
GY NG F +AL + KM+ + + + L AC H+ ++ G+EY
Sbjct: 433 GYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACA-----------HSGSLEKGWEY 481
Query: 252 ETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL 311
+ V+ G + ++ +VD +LE+AL +
Sbjct: 482 FHIM-----------------KQVYNISPGLDH---YSCMVDLLGRKGKLEEALEL---I 518
Query: 312 RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDM---YGKC 368
RN +P+ + +L+ AC K+ + Q + F+ +P +++ V+M Y
Sbjct: 519 RNMSAKPDAGIWGALLNAC----KIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAA 574
Query: 369 GLFD 372
G++D
Sbjct: 575 GMWD 578
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 8/229 (3%)
Query: 280 SGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHG 339
SG ++ ++ + V + ++L F +++ G EPN FTF + KACA A +
Sbjct: 12 SGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCC 71
Query: 340 SLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQH 399
++H ++K F D FV +A VDM+ KC D++ ++F+ + + T WN ++ F Q
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 400 GLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKI---YGVMPR 456
G A F EM + P++VT + L++ S E L +M + GV +
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIRLGVDVQ 187
Query: 457 EEHYNCIIDLLGRAGKLKEVEDFINSMPF-EPTAFGWCSFLGACKTHGD 504
N I G+ G L + ++ + T W S A G+
Sbjct: 188 VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGE 236
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/545 (30%), Positives = 286/545 (52%), Gaps = 12/545 (2%)
Query: 24 QTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMV 83
Q C+ L +G+ LH ++ G F+ + + + YSK G A F + +M
Sbjct: 238 QACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMF 297
Query: 84 SWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLV 143
SWT++I RS E+ D F +M+ +G +S ++ + + G H V
Sbjct: 298 SWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFV 357
Query: 144 VKSGFGCELFLGSNLTDMYSKCGEVSDA----CKVFEEMPCKDEVLWTSMIDGYVKNGNF 199
++ F + + ++L MY K +S A C++ EE ++ W +M+ GY K
Sbjct: 358 IRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEE---GNKEAWNTMLKGYGKMKCH 414
Query: 200 EKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNAL 259
K + ++K+ + ID S +S+C+ + A GKSLH +VK + + N+L
Sbjct: 415 VKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSL 474
Query: 260 TDLYSKSGDMVSASNVF-QSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEP 318
DLY K GD+ A +F ++D+ N++++ A++ YV +Q EKA+ F + + +P
Sbjct: 475 IDLYGKMGDLTVAWRMFCEADT---NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKP 531
Query: 319 NEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLF 378
+ T +L+ AC N LE G ++H + + + + +S+AL+DMY KCG + S +LF
Sbjct: 532 SSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELF 591
Query: 379 DEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVE 438
D + WN ++ + HG +AI F++M + +KP TF+ LL C+HAG+VE
Sbjct: 592 DAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVE 651
Query: 439 DGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGA 498
G F M + Y V P +HY+C++DLL R+G L+E E + SMPF P W + L +
Sbjct: 652 QGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSS 710
Query: 499 CKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLP 558
C THG+ E A + + +P+N G +++L+N+Y+ +WE+ R+M+R+ + K
Sbjct: 711 CMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRA 770
Query: 559 GYSWV 563
G+S V
Sbjct: 771 GHSVV 775
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 156/574 (27%), Positives = 263/574 (45%), Gaps = 54/574 (9%)
Query: 26 CAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSW 85
C Q+ L ++ +A +I GG F+ + L++ Y+ G+ + + ++F +++R++ W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 86 TAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVK 145
++I F + + +L F M G++ F V+ ACA L G VH LV+K
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 146 -SGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALI 204
GF +G++ YSKCG + DAC VF+EMP +D V WT++I G+V+NG E L
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 205 AYKKMVTDNVFIDQ---HVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
KM + +D+ L AC+ L A G+ LH VK G F+ +++
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFS 273
Query: 262 LYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEF 321
YSKSG+ A F+ + G ++ S+T+I+ +E++ + F +++N G+ P+
Sbjct: 274 FYSKSGNPSEAYLSFR-ELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Query: 322 TFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEI 381
S LI + G HG V++ F D V ++L+ MY K L + +LF I
Sbjct: 333 VISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRI 392
Query: 382 -ENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG 440
E N AWNT++ + + IE F ++ + G++ ++ + +++ CSH G V G
Sbjct: 393 SEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLG 452
Query: 441 LNYF-----YSMDKIYGVMPREEHYNCIIDLLGRAGKLK--------------------- 474
+ S+D V+ N +IDL G+ G L
Sbjct: 453 KSLHCYVVKTSLDLTISVV------NSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIA 506
Query: 475 ------------EVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPE- 521
+ D + S F+P++ + L AC G ER ++ + + E E
Sbjct: 507 SYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEM 566
Query: 522 NSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMK 555
N L ++YAK E R++ GN K
Sbjct: 567 NLSLSAALIDMYAKCGHLEKS---RELFDAGNQK 597
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 130/264 (49%), Gaps = 1/264 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS + +I +C+ + GK LH +++ + N L++LY K G+L A ++F
Sbjct: 432 DSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF 491
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ N+++W AMI + + +A+ F +M +E S L ++L AC + GS++
Sbjct: 492 CE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLE 550
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G +H + ++ L L + L DMY+KCG + + ++F+ KD V W MI GY
Sbjct: 551 RGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYG 610
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+G+ E A+ + +M +V + LSACT GK L + ++ +
Sbjct: 611 MHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLK 670
Query: 255 IGNALTDLYSKSGDMVSASNVFQS 278
+ L DL S+SG++ A + S
Sbjct: 671 HYSCLVDLLSRSGNLEEAESTVMS 694
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 305 bits (780), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 164/535 (30%), Positives = 286/535 (53%), Gaps = 13/535 (2%)
Query: 31 ELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMIT 90
+L KG +H ++ G + + L+++YSKCGEL+ A +LF + R++VSW+AMI
Sbjct: 315 DLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIA 374
Query: 91 GFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGC 150
+ ++ + EA+ F M + L+SVLQ CA + + + G +HC +K+
Sbjct: 375 SYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIES 434
Query: 151 ELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMV 210
EL + + MY+KCG S A K FE +P KD V + ++ GY + G+ KA YK M
Sbjct: 435 ELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMK 494
Query: 211 TDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMV 270
V D + L C ++ G ++ I+K GF+ E + +AL ++++K +
Sbjct: 495 LHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALA 554
Query: 271 SASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKAC 330
+A +F ++ VS+ +++GY+ Q E+A+ F ++ +PN TF ++++A
Sbjct: 555 AAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAA 614
Query: 331 ANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWN 390
A + L G +H +++ F V ++LVDMY KCG+ + S + F EI N +WN
Sbjct: 615 AELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWN 674
Query: 391 TLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKI 450
T++ +A HGL A+ F M + LKP++V+F+++L C HAG+VE+G F M +
Sbjct: 675 TMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGER 734
Query: 451 YGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKL 510
+ + EHY C++DLLG+AG E + + M + + W + L + + H + +
Sbjct: 735 HKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNA 794
Query: 511 AAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDI 565
A +L+KLEP N Y+++R+ +V + + +KK+P SW+++
Sbjct: 795 ALCQLVKLEPLNPSH-------YSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 244/490 (49%), Gaps = 6/490 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D ++ LI ++ ++ + LH +I+ G + ++ L+++Y C +L A +F
Sbjct: 200 DHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA--FSSGLIDMYCNCADLYAAESVF 257
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ + +++ SW M+ + + F E L+ F MR ++ A +S LQA A +G +
Sbjct: 258 EEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLV 317
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G+ +H V+ G ++ + ++L MYSKCGE+ A ++F + +D V W++MI Y
Sbjct: 318 KGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYE 377
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+ G ++A+ ++ M+ ++ + L S L C + A GKS+H +K E E
Sbjct: 378 QAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELE 437
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
A+ +Y+K G A F+ ++ V+F A+ GY ++ KA + + +++
Sbjct: 438 TATAVISMYAKCGRFSPALKAFERLP-IKDAVAFNALAQGYTQIGDANKAFDVYKNMKLH 496
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
G+ P+ T +++ CA + GS ++GQ++K FD + V+ AL++M+ KC +
Sbjct: 497 GVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAA 556
Query: 375 IQLFDEIENPNDT-AWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSH 433
I LFD+ T +WN ++ + HG A+ TF +M +PNAVTFVN+++ +
Sbjct: 557 IVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAE 616
Query: 434 AGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWC 493
+ G++ S+ + G + N ++D+ + G ++ E + W
Sbjct: 617 LSALRVGMSVHSSLIQC-GFCSQTPVGNSLVDMYAKCGMIESSEKCFIEIS-NKYIVSWN 674
Query: 494 SFLGACKTHG 503
+ L A HG
Sbjct: 675 TMLSAYAAHG 684
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 233/484 (48%), Gaps = 13/484 (2%)
Query: 37 QLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSL 96
Q+H LI G P N L+N YS D + +FD + +V W +MI G+ R+
Sbjct: 23 QVHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 97 RFREALDTFCQMRAE-GETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLG 155
REAL F M E G +++ + L+ACA + G+++H L+ + G ++++G
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 156 SNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVF 215
+ L +MY K ++ A +VF++M KD V W +M+ G +NG AL+ + M + V
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 216 IDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNV 275
ID L + + A + L+ + LH +++K GF + + L D+Y D+ +A +V
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA--FSSGLIDMYCNCADLYAAESV 256
Query: 276 FQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAK 335
F+ + ++ S+ ++ Y E+ L F +RN + N+ +S ++A A
Sbjct: 257 FE-EVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315
Query: 336 LEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGV 395
L G +H V+ D V+++L+ MY KCG + + QLF IE+ + +W+ ++
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIAS 375
Query: 396 FAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMP 455
+ Q G AI F +M+ +KPNAVT ++L+GC AG+ L I +
Sbjct: 376 YEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGC--AGVAASRLGKSIHCYAIKADIE 433
Query: 456 RE-EHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYK 514
E E +I + + G+ +P + A + + GD +A YK
Sbjct: 434 SELETATAVISMYAKCGRFSPALKAFERLPIKD-AVAFNALAQGYTQIGDANKA-FDVYK 491
Query: 515 LMKL 518
MKL
Sbjct: 492 NMKL 495
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 240/498 (48%), Gaps = 7/498 (1%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM 82
++ CA + + KG ++H + G ++ L+ +Y K +L A ++FD+M +++
Sbjct: 107 LKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDV 166
Query: 83 VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCL 142
V+W M++G ++ AL F MR+ +L +++ A + L +H L
Sbjct: 167 VTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGL 226
Query: 143 VVKSGFGCELF-LGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
V+K GF +F S L DMY C ++ A VFEE+ KDE W +M+ Y NG FE+
Sbjct: 227 VIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEE 283
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
L + M +V +++ S L A + G ++H V+ G + + +L
Sbjct: 284 VLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMS 343
Query: 262 LYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEF 321
+YSK G++ A +F + R++VS++A++ Y + Q ++A++ F D+ I+PN
Sbjct: 344 MYSKCGELEIAEQLFINIED-RDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAV 402
Query: 322 TFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEI 381
T +S+++ CA A G +H +K + + + ++A++ MY KCG F +++ F+ +
Sbjct: 403 TLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERL 462
Query: 382 ENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGL 441
+ A+N L + Q G A + + M G+ P++ T V +L+ C+ G
Sbjct: 463 PIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGS 522
Query: 442 NYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKT 501
+ + K +G + +I++ + L + FE + W +
Sbjct: 523 CVYGQIIK-HGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLL 581
Query: 502 HGDKERAKLAAYKLMKLE 519
HG E A +A ++ MK+E
Sbjct: 582 HGQAEEA-VATFRQMKVE 598
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 176/558 (31%), Positives = 297/558 (53%), Gaps = 14/558 (2%)
Query: 13 LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDY--A 70
L + + +LI C+ + KQ+ QLI L + N ++ K + +
Sbjct: 3 LPEKSVLLELISRCSSLRVF---KQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSS 59
Query: 71 IKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
+ L S + S+ +++ + + R + + + G + F V +AC
Sbjct: 60 VILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKF 119
Query: 131 GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMI 190
I+ G Q+H +V K GF ++++ ++L Y CGE +ACKVF EMP +D V WT +I
Sbjct: 120 SGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGII 179
Query: 191 DGYVKNGNFEKALIAYKKM-VTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF 249
G+ + G +++AL + KM V N+ VL S+ + S GK +H +I+K
Sbjct: 180 TGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSS----GRVGCLSLGKGIHGLILKRAS 235
Query: 250 EYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFI 309
GNAL D+Y K + A VF + ++ VS+ +++ G V ++ ++A++ F
Sbjct: 236 LISLETGNALIDMYVKCEQLSDAMRVF-GELEKKDKVSWNSMISGLVHCERSKEAIDLFS 294
Query: 310 DLR-NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKC 368
++ +SGI+P+ +S++ ACA+ ++HG +H ++ D + +A+VDMY KC
Sbjct: 295 LMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKC 354
Query: 369 GLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLL 428
G + ++++F+ I + N WN L+G A HG G ++ F EMV G KPN VTF+ L
Sbjct: 355 GYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAAL 414
Query: 429 KGCSHAGMVEDGLNYFYSM-DKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEP 487
C H G+V++G YF+ M + Y + P+ EHY C+IDLL RAG L E + + +MP +P
Sbjct: 415 NACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKP 474
Query: 488 TAFGWCSFLGACKTHGD-KERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLR 546
+ L ACK G E K + +E E+SG +VLLSNI+A R+W+DV +R
Sbjct: 475 DVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIR 534
Query: 547 KMIRDGNMKKLPGYSWVD 564
++++ + K+PG S+++
Sbjct: 535 RLMKVKGISKVPGSSYIE 552
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 304 bits (778), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/531 (32%), Positives = 291/531 (54%), Gaps = 6/531 (1%)
Query: 38 LHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLR 97
+H I G L + L++LY K G++ +A KLFDR+SKR++VSWTAMI+ F R
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 98 FREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSN 157
+AL F +M E A+QF SVL++C LG ++ G+Q+H V K L + S
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 158 LTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFID 217
L +Y++CG++ +A F+ M +D V W +MIDGY N + + ++ M+T+ D
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 218 QHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQ 277
S L A +K LH + +K GF + + +L + Y K G + +A + +
Sbjct: 214 CFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHE 273
Query: 278 SDSGCRNIVSFTAIVDGYVEMDQ-LEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKL 336
R+++S TA++ G+ + + A + F D+ + +E SS++K C A +
Sbjct: 274 GTKK-RDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASV 332
Query: 337 EHGSLLHGQVVKFNFDR-DPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGV 395
G +HG +K + R D + ++L+DMY K G + ++ F+E++ + +W +L+
Sbjct: 333 TIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAG 392
Query: 396 FAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMP 455
+ +HG AI+ +N M +KPN VTF++LL CSH G E G + +M +G+
Sbjct: 393 YGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEA 452
Query: 456 REEHYNCIIDLLGRAGKLKEVEDFINSMP--FEPTAFGWCSFLGACKTHGDKERAKLAAY 513
REEH +CIID+L R+G L+E I S ++ W +FL AC+ HG+ + +K+AA
Sbjct: 453 REEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAAT 512
Query: 514 KLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRD-GNMKKLPGYSWV 563
+L+ +EP ++ L+++YA W++ RK++++ G+ K PGYS V
Sbjct: 513 QLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 219/430 (50%), Gaps = 14/430 (3%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
++++C L +G Q+H + +G C + + LL+LY++CG+++ A FD M +R+
Sbjct: 119 VLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERD 178
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
+VSW AMI G+ + + F M EG+ F S+L+A + ++ ++H
Sbjct: 179 LVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHG 238
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGN-FE 200
L +K GFG L +L + Y KCG +++A K+ E +D + T++I G+ + N
Sbjct: 239 LAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTS 298
Query: 201 KALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFG-FEYETFIGNAL 259
A +K M+ +D+ V+ S L CT + + + G+ +H +K ++ +GN+L
Sbjct: 299 DAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSL 358
Query: 260 TDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPN 319
D+Y+KSG++ A F+ + +++ S+T+++ GY EKA++ + + + I+PN
Sbjct: 359 IDMYAKSGEIEDAVLAFE-EMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPN 417
Query: 320 EFTFSSLIKACANQAKLEHGSLLHGQVV-KFNFDRDPFVSSALVDMYGKCGLFDHSIQLF 378
+ TF SL+ AC++ + E G ++ ++ K + S ++DM + G + + L
Sbjct: 418 DVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALI 477
Query: 379 ---DEIENPNDTAWNTLVGVFAQHG---LGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
+ I + + + W + +HG L + A M R KP V ++NL +
Sbjct: 478 RSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPR--KP--VNYINLASVYA 533
Query: 433 HAGMVEDGLN 442
G ++ LN
Sbjct: 534 ANGAWDNALN 543
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 8/169 (4%)
Query: 327 IKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPND 386
+K C+ Q + L+HG + F + + L+D+Y K G H+ +LFD I +
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDV 78
Query: 387 TAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYS 446
+W ++ F++ G +A+ F EM +K N T+ ++LK C G +++G+ S
Sbjct: 79 VSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGS 138
Query: 447 MDK---IYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGW 492
++K ++ R + ++ L R GK++E +SM E W
Sbjct: 139 VEKGNCAGNLIVR----SALLSLYARCGKMEEARLQFDSMK-ERDLVSW 182
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 302 bits (773), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 171/553 (30%), Positives = 288/553 (52%), Gaps = 13/553 (2%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
L++ C +L +Q+ AQ++ FL + L G+ +Y+ LF + N
Sbjct: 43 LLKKCISVNQL---RQIQAQMLLHSVEKPNFLIPKAVEL----GDFNYSSFLFSVTEEPN 95
Query: 82 MVSWTAMITGFFRSLRFREA-LDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVH 140
S+ MI G + EA L + +M+ G +F + V ACA L I G VH
Sbjct: 96 HYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVH 155
Query: 141 CLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFE 200
+ K G ++ + +L MY+KCG+V A K+F+E+ +D V W SMI GY + G +
Sbjct: 156 SSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAK 215
Query: 201 KALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALT 260
A+ ++KM + D+ L S L AC+ L G+ L + + TF+G+ L
Sbjct: 216 DAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLI 275
Query: 261 DLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNE 320
+Y K GD+ SA VF ++ V++TA++ Y + + +A F ++ +G+ P+
Sbjct: 276 SMYGKCGDLDSARRVFNQMIK-KDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDA 334
Query: 321 FTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDE 380
T S+++ AC + LE G + + + + +V++ LVDMYGKCG + ++++F+
Sbjct: 335 GTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEA 394
Query: 381 IENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG 440
+ N+ WN ++ +A G + A+ F+ M + P+ +TF+ +L C HAG+V G
Sbjct: 395 MPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQG 451
Query: 441 LNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACK 500
YF+ M ++G++P+ EHY IIDLL RAG L E +F+ P +P + LGAC
Sbjct: 452 CRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACH 511
Query: 501 THGDKERAKLAAYKLMKL-EPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPG 559
D + A LM++ E +N+G +V+ SN+ A + W++ +R ++RD + K PG
Sbjct: 512 KRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPG 571
Query: 560 YSWVDIGNETHVF 572
SW++I E F
Sbjct: 572 CSWIEIEGELMEF 584
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 154/307 (50%), Gaps = 13/307 (4%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + + ++ C+ +L G+ L I TFL + L+++Y KCG+LD A ++F
Sbjct: 232 DERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVF 291
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
++M K++ V+WTAMIT + ++ + EA F +M G + LS+VL AC S+G+++
Sbjct: 292 NQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALE 351
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G Q+ + +++ + L DMY KCG V +A +VFE MP K+E W +MI Y
Sbjct: 352 LGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYA 411
Query: 195 KNGNFEKALIAYKKM---VTDNVFIDQHVLCSTLSACTALKAFSFG-KSLHAIIVKFGFE 250
G+ ++AL+ + +M +D FI LSAC G + H + FG
Sbjct: 412 HQGHAKEALLLFDRMSVPPSDITFI------GVLSACVHAGLVHQGCRYFHEMSSMFGLV 465
Query: 251 YETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQL---EKALNA 307
+ + DL S++G + A + G + + AI+ + + EKA+
Sbjct: 466 PKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRM 525
Query: 308 FIDLRNS 314
++++ +
Sbjct: 526 LMEMKEA 532
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 301 bits (772), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 170/541 (31%), Positives = 283/541 (52%), Gaps = 44/541 (8%)
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
M+S A ITG + R +T R + L SVL++C ++ + +H
Sbjct: 1 MISSLAAITGGPSTFRRDPDSNTLRLSRRK-------TLISVLRSCKNIAHVP---SIHA 50
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
++++ + F+ L + S V A VF + + L+T+MIDG+V +G
Sbjct: 51 KIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSAD 110
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
+ Y +M+ ++V D +V+ S L AC + +HA ++K GF +G + +
Sbjct: 111 GVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLGFGSSRSVGLKMME 166
Query: 262 LYSKSGDMVSASNVFQ------------------------------SDSGCRNIVSFTAI 291
+Y KSG++V+A +F D ++ V +TA+
Sbjct: 167 IYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAM 226
Query: 292 VDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNF 351
+DG V ++ KAL F +++ + NEFT ++ AC++ LE G +H V
Sbjct: 227 IDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRM 286
Query: 352 DRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNE 411
+ FV +AL++MY +CG + + ++F + + + ++NT++ A HG AI F +
Sbjct: 287 ELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRD 346
Query: 412 MVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAG 471
MV+RG +PN VT V LL CSH G+++ GL F SM +++ V P+ EHY CI+DLLGR G
Sbjct: 347 MVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVG 406
Query: 472 KLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSN 531
+L+E FI ++P EP + L ACK HG+ E + A +L + E +SG +VLLSN
Sbjct: 407 RLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSN 466
Query: 532 IYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDS 591
+YA +W++ +R+ +RD ++K PG S +++ N+ H F V D +HP K+ IY++L
Sbjct: 467 LYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQE 526
Query: 592 L 592
L
Sbjct: 527 L 527
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 204/428 (47%), Gaps = 53/428 (12%)
Query: 12 KLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAI 71
+L K + ++++C K ++ +HA++IR F+ L+ + S +DYA
Sbjct: 25 RLSRRKTLISVLRSC---KNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAY 81
Query: 72 KLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLG 131
+F +S N+ +TAMI GF S R + + + +M + ++SVL+AC
Sbjct: 82 DVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC---- 137
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP------------ 179
++ ++H V+K GFG +G + ++Y K GE+ +A K+F+EMP
Sbjct: 138 DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMIN 197
Query: 180 -------------------CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHV 220
KD V WT+MIDG V+N KAL +++M +NV ++
Sbjct: 198 CYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFT 257
Query: 221 LCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDS 280
LSAC+ L A G+ +H+ + E F+GNAL ++YS+ GD+ A VF+
Sbjct: 258 AVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMR 317
Query: 281 GCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGS 340
++++S+ ++ G +A+N F D+ N G PN+ T +L+ AC+ HG
Sbjct: 318 D-KDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACS------HGG 370
Query: 341 LLHGQVVKFN-----FDRDPFVS--SALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTL 392
LL + FN F+ +P + +VD+ G+ G + + + + I P+ TL
Sbjct: 371 LLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTL 430
Query: 393 VGVFAQHG 400
+ HG
Sbjct: 431 LSACKIHG 438
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 177/398 (44%), Gaps = 70/398 (17%)
Query: 21 QLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKR 80
++++ ++ EL K++ ++ + T + +N YS+CG + A++LF + +
Sbjct: 163 KMMEIYGKSGELVNAKKMFDEMPDRDHVAATVM----INCYSECGFIKEALELFQDVKIK 218
Query: 81 NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVH 140
+ V WTAMI G R+ +AL+ F +M+ E +A++F VL AC+ LG+++ G VH
Sbjct: 219 DTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVH 278
Query: 141 CLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFE 200
V F+G+ L +MYS+CG++++A +VF M KD + + +MI G +G
Sbjct: 279 SFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASV 338
Query: 201 KALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALT 260
+A+ ++ MV +Q L + L+AC+ H ++ G E
Sbjct: 339 EAINEFRDMVNRGFRPNQVTLVALLNACS-----------HGGLLDIGLEV--------- 378
Query: 261 DLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNE 320
S VF + I + IVD + +LE+A FI+ N IEP+
Sbjct: 379 --------FNSMKRVFNVEP---QIEHYGCIVDLLGRVGRLEEAYR-FIE--NIPIEPDH 424
Query: 321 FTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDE 380
+L+ AC +E G ++ K +LF E
Sbjct: 425 IMLGTLLSACKIHGNMELGE----KIAK---------------------------RLF-E 452
Query: 381 IENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLK 418
ENP+ + L ++A G + + E M D G++
Sbjct: 453 SENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIE 490
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 301 bits (771), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 185/652 (28%), Positives = 310/652 (47%), Gaps = 74/652 (11%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ V + + C K G+ +H +++ G C F+ + L ++Y KCG LD A K+F
Sbjct: 172 DNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVF 231
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
D + RN V+W A++ G+ ++ + EA+ F MR +G ++ +S+ L A A++G ++
Sbjct: 232 DEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVE 291
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G Q H + + +G + LG++L + Y K G + A VF+ M KD V W +I GYV
Sbjct: 292 EGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYV 351
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+ G E A+ + M + + D L + +SA + GK + ++ FE +
Sbjct: 352 QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIV 411
Query: 255 IGNALTDLYSKSGDMVSASNVFQS-----------------DSGCR-------------- 283
+ + + D+Y+K G +V A VF S +SG
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Query: 284 ---NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI------------------------ 316
N++++ I+ + Q+++A + F+ +++SGI
Sbjct: 472 VPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAI 531
Query: 317 -----------EPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVD 363
PN F+ + + ACA+ A L G +HG +++ N VS ++LVD
Sbjct: 532 LFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIR-NLQHSSLVSIETSLVD 590
Query: 364 MYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVT 423
MY KCG + + ++F N ++ +A +G + AI + + GLKP+ +T
Sbjct: 591 MYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNIT 650
Query: 424 FVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
N+L C+HAG + + F + + P EHY ++DLL AG+ ++ I M
Sbjct: 651 ITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM 710
Query: 484 PFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVR 543
PF+P A S + +C E + KL++ EPENSG +V +SN YA E W++V
Sbjct: 711 PFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVV 770
Query: 544 CLRKMIRDGNMKKLPGYSWVDIGNE--THVFGVEDWSHPRKKEIYEKLDSLL 593
+R+M++ +KK PG SW+ I E HVF D +H R EI L LL
Sbjct: 771 KMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLL 822
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/496 (29%), Positives = 249/496 (50%), Gaps = 7/496 (1%)
Query: 9 FRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPC--TFLTNHLLNLYSKCGE 66
FR+ + +++Q C ++LS GKQ+HA++++ G ++ L+ Y+KC
Sbjct: 63 FRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDA 122
Query: 67 LDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQA 126
L+ A LF ++ RN+ SW A+I R AL F +M F + +V +A
Sbjct: 123 LEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKA 182
Query: 127 CASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLW 186
C +L +FG VH VVKSG +F+ S+L DMY KCG + DA KVF+E+P ++ V W
Sbjct: 183 CGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAW 242
Query: 187 TSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVK 246
+++ GYV+NG E+A+ + M V + + + LSA + GK HAI +
Sbjct: 243 NALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIV 302
Query: 247 FGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALN 306
G E + +G +L + Y K G + A VF +++V++ I+ GYV+ +E A+
Sbjct: 303 NGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFE-KDVVTWNLIISGYVQQGLVEDAIY 361
Query: 307 AFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYG 366
+R ++ + T ++L+ A A L+ G + ++ +F+ D ++S ++DMY
Sbjct: 362 MCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYA 421
Query: 367 KCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVN 426
KCG + ++FD + WNTL+ +A+ GL A+ F M G+ PN +T+
Sbjct: 422 KCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNL 481
Query: 427 LLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMP-- 484
++ G V++ + F M G++P + +++ + + G +E F+ M
Sbjct: 482 IILSLLRNGQVDEAKDMFLQMQS-SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQES 540
Query: 485 -FEPTAFGWCSFLGAC 499
P AF L AC
Sbjct: 541 GLRPNAFSITVALSAC 556
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 171/352 (48%), Gaps = 3/352 (0%)
Query: 84 SWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLV 143
S+ ++ ++ +EAL +M +LQ C + G Q+H +
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARI 96
Query: 144 VKSG--FGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
+K+G + ++ + L Y+KC + A +F ++ ++ W ++I + G E
Sbjct: 97 LKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEG 156
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
AL+ + +M+ + +F D V+ + AC ALK FG+ +H +VK G E F+ ++L D
Sbjct: 157 ALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLAD 216
Query: 262 LYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEF 321
+Y K G + AS VF RN V++ A++ GYV+ + E+A+ F D+R G+EP
Sbjct: 217 MYGKCGVLDDASKVFDEIPD-RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRV 275
Query: 322 TFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEI 381
T S+ + A AN +E G H + + D + ++L++ Y K GL +++ +FD +
Sbjct: 276 TVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM 335
Query: 382 ENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSH 433
+ WN ++ + Q GL +AI M LK + VT L+ +
Sbjct: 336 FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAAR 387
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 126/248 (50%), Gaps = 3/248 (1%)
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFG--FEYE 252
KNG ++AL +M N+ I + L C + S GK +HA I+K G +
Sbjct: 47 KNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARN 106
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR 312
+I L Y+K D + + V S RN+ S+ AI+ + E AL F+++
Sbjct: 107 EYIETKLVIFYAKC-DALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEML 165
Query: 313 NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
+ I P+ F ++ KAC G +HG VVK + FV+S+L DMYGKCG+ D
Sbjct: 166 ENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLD 225
Query: 373 HSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
+ ++FDEI + N AWN L+ + Q+G AI F++M +G++P VT L +
Sbjct: 226 DASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASA 285
Query: 433 HAGMVEDG 440
+ G VE+G
Sbjct: 286 NMGGVEEG 293
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 174/398 (43%), Gaps = 47/398 (11%)
Query: 6 LFRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCG 65
L R D +A L+ A+ + L GK++ IR L + ++++Y+KCG
Sbjct: 365 LMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCG 424
Query: 66 ELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQ 125
+ A K+FD +++++ W ++ + S EAL F M+ EG
Sbjct: 425 SIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG------------- 471
Query: 126 ACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK---- 181
+ V L++ S + G+V +A +F +M
Sbjct: 472 -------VPPNVITWNLIILSLL---------------RNGQVDEAKDMFLQMQSSGIIP 509
Query: 182 DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLH 241
+ + WT+M++G V+NG E+A++ +KM + + + LSAC L + G+++H
Sbjct: 510 NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIH 569
Query: 242 AIIVKFGFEYETFIG--NALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMD 299
I++ ++ + + +L D+Y+K GD+ A VF S +S A++ Y
Sbjct: 570 GYIIR-NLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS-NAMISAYALYG 627
Query: 300 QLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS- 358
L++A+ + L G++P+ T ++++ AC + + + +V P +
Sbjct: 628 NLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVS-KRSMKPCLEH 686
Query: 359 -SALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVG 394
+VD+ G + +++L +E+ P+ +LV
Sbjct: 687 YGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVA 724
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/619 (27%), Positives = 308/619 (49%), Gaps = 41/619 (6%)
Query: 19 VAQLIQTCAQAKE---LSKGKQLHAQLIRGGCLPC-TFLTNHLLNLYSKCGELDYAIKLF 74
+A ++ CA + G+Q+H+ +++ L F+ N L++ Y + G ++ A LF
Sbjct: 227 IANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLF 286
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETAS-QFALSSVLQACASLGSI 133
RM +++VSW +I G+ + + +A F + +G+ + + S+L CA L +
Sbjct: 287 TRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDL 346
Query: 134 QFGVQVHCLVVKSGFGCE-LFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDG 192
G ++H +++ + E +G+ L Y++ G+ S A F M KD + W +++D
Sbjct: 347 ASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDA 406
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF--- 249
+ + + L ++ + + +D + S L C ++ K +H VK G
Sbjct: 407 FADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHD 466
Query: 250 EYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYV------------- 296
E E +GNAL D Y+K G++ A +F S R +VS+ +++ GYV
Sbjct: 467 EEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFT 526
Query: 297 EMDQLE------------------KALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEH 338
EM + +A+ F +++ G+ PN T +L+ CA A L
Sbjct: 527 EMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHL 586
Query: 339 GSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQ 398
HG +++ D + L+D+Y KCG H+ +F + + +V +A
Sbjct: 587 VRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAV 645
Query: 399 HGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREE 458
HG G+ A+ ++ M + +KP+ V +L C HAG+++DGL + S+ ++G+ P E
Sbjct: 646 HGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTME 705
Query: 459 HYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKL 518
Y C +DL+ R G+L + F+ MP EP A W + L AC T+ + A L++
Sbjct: 706 QYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQA 765
Query: 519 EPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWS 578
E +++G HVL+SN+YA + +WE V LR +++ MKK G SW+++ + +VF D S
Sbjct: 766 ESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCS 825
Query: 579 HPRKKEIYEKLDSLLDQIK 597
HPR+ I++ +++L Q+K
Sbjct: 826 HPRRDSIFDLVNALYLQMK 844
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/508 (23%), Positives = 237/508 (46%), Gaps = 16/508 (3%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + +++ CA +L+ G+ LH + + G + C+ ++ +LN+Y+KC +D K+F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMR-AEGETASQFALSSVLQACASLGSI 133
+M + V W ++TG S RE + F M A+ S + VL C LG
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVSCG-RETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDS 138
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEV-SDACKVFEEMPCKDEVLWTSMIDG 192
G +H ++K+G + +G+ L MY+K G + DA F+ + KD V W ++I G
Sbjct: 139 YNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAG 198
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALK---AFSFGKSLHAIIVKFGF 249
+ +N A ++ M+ + + + + L C ++ A G+ +H+ +V+ +
Sbjct: 199 FSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSW 258
Query: 250 -EYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAF 308
+ F+ N+L Y + G + A+++F + G +++VS+ ++ GY + KA F
Sbjct: 259 LQTHVFVCNSLVSFYLRVGRIEEAASLF-TRMGSKDLVSWNVVIAGYASNCEWFKAFQLF 317
Query: 309 IDLRNSG-IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNF-DRDPFVSSALVDMYG 366
+L + G + P+ T S++ CA L G +H +++ ++ D V +AL+ Y
Sbjct: 318 HNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYA 377
Query: 367 KCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVN 426
+ G + F + + +WN ++ FA + + +++ + ++VT ++
Sbjct: 378 RFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILS 437
Query: 427 LLKGCSHA-GMVEDGLNYFYSMDKIYGVMPREEHY---NCIIDLLGRAGKLKEVEDFINS 482
LLK C + G+ + + YS+ G++ EE N ++D + G ++
Sbjct: 438 LLKFCINVQGIGKVKEVHGYSVKA--GLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLG 495
Query: 483 MPFEPTAFGWCSFLGACKTHGDKERAKL 510
+ T + S L G + A++
Sbjct: 496 LSERRTLVSYNSLLSGYVNSGSHDDAQM 523
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
SG + F ++KACA+ + L G LHG V K VS ++++MY KC D
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDD 74
Query: 374 SIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEM--VDRGLKPNAVTFVNLLKGC 431
++F ++++ + WN ++ + GR + F M D KP++VTF +L C
Sbjct: 75 CQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEP-KPSSVTFAIVLPLC 132
Query: 432 SHAG 435
G
Sbjct: 133 VRLG 136
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 271/501 (54%), Gaps = 27/501 (5%)
Query: 73 LFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEG-ETASQFALSSVLQACASLG 131
+F+R+ W +I G+ F E + +M G ++ V++ C++ G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMID 191
++ G VH LV++ GF ++ +G++ D Y KC ++ A KVF EMP ++ V WT+++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 192 GYVKNGNFEKA-----LIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVK 246
YVK+G E+A L+ + + + N +D V L L F + I+
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKL----FDEMPKRDIIS 240
Query: 247 FGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALN 306
+ ++ D Y+K GDMVSA ++F+ G ++ +++A++ GY + Q +A
Sbjct: 241 Y---------TSMIDGYAKGGDMVSARDLFEEARGV-DVRAWSALILGYAQNGQPNEAFK 290
Query: 307 AFIDLRNSGIEPNEFTFSSLIKACANQAKLEH----GSLLHGQVVKFNFDRDPFVSSALV 362
F ++ ++P+EF L+ AC+ E S LH ++ KF+ +V AL+
Sbjct: 291 VFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS---SHYVVPALI 347
Query: 363 DMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAV 422
DM KCG D + +LF+E+ + ++ +++ A HG G AI F +MVD G+ P+ V
Sbjct: 348 DMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEV 407
Query: 423 TFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINS 482
F +LK C + +VE+GL YF M K Y ++ +HY+CI++LL R GKLKE + I S
Sbjct: 408 AFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKS 467
Query: 483 MPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDV 542
MPFE A W S LG C HG+ E A++ A L +LEP+++G++VLLSNIYA +W DV
Sbjct: 468 MPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDV 527
Query: 543 RCLRKMIRDGNMKKLPGYSWV 563
LR + + + K+ G SW+
Sbjct: 528 AHLRDKMNENGITKICGRSWI 548
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 186/393 (47%), Gaps = 20/393 (5%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D +++ C+ ++ G +H ++R G + ++ Y KC +L A K+F
Sbjct: 109 DEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVF 168
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
M +RN VSWTA++ + +S EA F + E S AL + G +
Sbjct: 169 GEMPERNAVSWTALVVAYVKSGELEEAKSMF-DLMPERNLGSWNAL---VDGLVKSGDLV 224
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
++ + K ++ +++ D Y+K G++ A +FEE D W+++I GY
Sbjct: 225 NAKKLFDEMPKR----DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYA 280
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKS----LHAIIVKFGFE 250
+NG +A + +M NV D+ ++ +SAC+ + F + LH + KF
Sbjct: 281 QNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSH 340
Query: 251 YETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID 310
Y + AL D+ +K G M A+ +F+ + R++VS+ ++++G +A+ F
Sbjct: 341 Y---VVPALIDMNAKCGHMDRAAKLFE-EMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEK 396
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVV--KFNFDRDPFVSSALVDMYGKC 368
+ + GI P+E F+ ++K C +E G L + +++ K++ P S +V++ +
Sbjct: 397 MVDEGIVPDEVAFTVILKVCGQSRLVEEG-LRYFELMRKKYSILASPDHYSCIVNLLSRT 455
Query: 369 GLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHG 400
G + +L + + +AW +L+G + HG
Sbjct: 456 GKLKEAYELIKSMPFEAHASAWGSLLGGCSLHG 488
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/571 (29%), Positives = 293/571 (51%), Gaps = 65/571 (11%)
Query: 55 NHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET 114
N +++ ++K GEL A +LF+ M ++++V+ +++ G+ + EAL F ++ +
Sbjct: 128 NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNF---S 184
Query: 115 ASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKV 174
A L++VL+ACA L +++ G Q+H ++ G C+ + S+L ++Y+KCG++ A +
Sbjct: 185 ADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYM 244
Query: 175 FEEMPCKDE-------------------------------VLWTSMIDGYVKNGNFEKAL 203
E++ D+ +LW SMI GY+ N +AL
Sbjct: 245 LEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEAL 304
Query: 204 IAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLY 263
+ + +M + D L + ++AC L GK +H KFG + + + L D+Y
Sbjct: 305 VLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMY 363
Query: 264 SKSGDMVSASNVFQS----------------------DSGCR--------NIVSFTAIVD 293
SK G + A +F D R +++S+ ++ +
Sbjct: 364 SKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTN 423
Query: 294 GYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDR 353
G+ + + L F + + +E + SS+I ACA+ + LE G + + D
Sbjct: 424 GFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDS 483
Query: 354 DPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMV 413
D VSS+L+D+Y KCG +H ++FD + ++ WN+++ +A +G G AI+ F +M
Sbjct: 484 DQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMS 543
Query: 414 DRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKL 473
G++P +TF+ +L C++ G+VE+G F SM +G +P +EH++C++DLL RAG +
Sbjct: 544 VAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYV 603
Query: 474 KEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIY 533
+E + + MPF+ W S L C +G K K AA K+++LEPENS A+V LS I+
Sbjct: 604 EEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIF 663
Query: 534 AKERQWEDVRCLRKMIRDGNMKKLPGYSWVD 564
A WE +RK++R+ N+ K PG SW D
Sbjct: 664 ATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 231/494 (46%), Gaps = 83/494 (16%)
Query: 6 LFRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCG 65
LF+ + D+ + +++ CA+ + L GKQ+HAQ++ GG + + + L+N+Y+KCG
Sbjct: 177 LFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCG 236
Query: 66 EL--------------DYAIK-----------------LFDRMSKRNMVSWTAMITGFFR 94
+L D+++ LFDR S R ++ W +MI+G+
Sbjct: 237 DLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIA 296
Query: 95 SLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFL 154
+ EAL F +MR E S+ L++V+ AC LG ++ G Q+HC K G ++ +
Sbjct: 297 NNMKMEALVLFNEMRNETREDSR-TLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVV 355
Query: 155 GSNLTDMYSKCGEVSDACKVFEEMPCKDEVL----------------------------- 185
S L DMYSKCG +ACK+F E+ D +L
Sbjct: 356 ASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSL 415
Query: 186 --WTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAI 243
W SM +G+ +NG + L + +M ++ D+ L S +SAC ++ + G+ + A
Sbjct: 416 ISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFAR 475
Query: 244 IVKFGFEYETFIGNALTDLYSKSGDMVSASNVF----QSDSGCRNIVSFTAIVDGYVEMD 299
G + + + ++L DLY K G + VF +SD V + +++ GY
Sbjct: 476 ATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDE-----VPWNSMISGYATNG 530
Query: 300 QLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHG-SLLHGQVVKFNFDRDPFVS 358
Q +A++ F + +GI P + TF ++ AC +E G L V F D
Sbjct: 531 QGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHF 590
Query: 359 SALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHG---LGRNAIETFNEMVD 414
S +VD+ + G + +I L +E+ + + + W++++ +G +G+ A E E
Sbjct: 591 SCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIE--- 647
Query: 415 RGLKP-NAVTFVNL 427
L+P N+V +V L
Sbjct: 648 --LEPENSVAYVQL 659
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/545 (25%), Positives = 236/545 (43%), Gaps = 107/545 (19%)
Query: 21 QLIQTCAQAKELSKGKQLHAQLIRGGCLPC-TFLTNHLLNLYSKCGELDYAIKLFDRMSK 79
+L+Q+C+ + +Q + L++ G L + NHLL +YS+ G++ A LFD M
Sbjct: 31 RLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPD 90
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQV 139
RN SW MI G+ S +L F M E + S
Sbjct: 91 RNYFSWNTMIEGYMNSGEKGTSL-RFFDMMPERDGYSWN--------------------- 128
Query: 140 HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNF 199
VV SGF +K GE+S A ++F MP KD V S++ GY+ NG
Sbjct: 129 ---VVVSGF--------------AKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYA 171
Query: 200 EKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNAL 259
E+AL +K++ N D L + L AC L+A GK +HA I+ G E ++ + ++L
Sbjct: 172 EEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSL 228
Query: 260 TDLYSKSGDMVSASNVFQSD---------------SGC---------------RNIVSFT 289
++Y+K GD+ AS + + + C R ++ +
Sbjct: 229 VNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWN 288
Query: 290 AIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF 349
+++ GY+ + +AL F ++RN E + T +++I AC LE G +H KF
Sbjct: 289 SMISGYIANNMKMEALVLFNEMRNETREDSR-TLAAVINACIGLGFLETGKQMHCHACKF 347
Query: 350 NFDRDPFVSSALVDMYGKCG-------LF------------------------DHSIQLF 378
D V+S L+DMY KCG LF D + ++F
Sbjct: 348 GLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVF 407
Query: 379 DEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVE 438
+ IEN + +WN++ F+Q+G +E F++M L + V+ +++ C+ +E
Sbjct: 408 ERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLE 467
Query: 439 DGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGA 498
G F + I G+ + + +IDL + G ++ ++M + W S +
Sbjct: 468 LGEQVF-ARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISG 525
Query: 499 CKTHG 503
T+G
Sbjct: 526 YATNG 530
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 167/379 (44%), Gaps = 45/379 (11%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCG--------- 65
DS+ +A +I C L GKQ+H + G + + + LL++YSKCG
Sbjct: 317 DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLF 376
Query: 66 ----------------------ELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALD 103
+D A ++F+R+ ++++SW +M GF ++ E L+
Sbjct: 377 SEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLE 436
Query: 104 TFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYS 163
F QM + +LSSV+ ACAS+ S++ G QV G + + S+L D+Y
Sbjct: 437 YFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYC 496
Query: 164 KCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCS 223
KCG V +VF+ M DEV W SMI GY NG +A+ +KKM + Q
Sbjct: 497 KCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMV 556
Query: 224 TLSACTALKAFSFGKSL-HAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNV-----FQ 277
L+AC G+ L ++ V GF + + + DL +++G + A N+ F
Sbjct: 557 VLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFD 616
Query: 278 SDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEP-NEFTFSSLIKACANQAKL 336
D + + + +GY M + KA I+L EP N + L A
Sbjct: 617 VDGSMWSSILRGCVANGYKAMGK--KAAEKIIEL-----EPENSVAYVQLSAIFATSGDW 669
Query: 337 EHGSLLHGQVVKFNFDRDP 355
E +L+ + + N ++P
Sbjct: 670 ESSALVRKLMRENNVTKNP 688
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/616 (27%), Positives = 302/616 (49%), Gaps = 37/616 (6%)
Query: 18 AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM 77
+ A L+ C + G Q+HA I G + L L+ YS + A + +
Sbjct: 45 SAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENS 104
Query: 78 SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
+ + W +I + ++ F E + + +M ++G F SVL+AC + FG
Sbjct: 105 DILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGR 164
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNG 197
VH + S + L++ + L MY + + A ++F+ M +D V W ++I+ Y G
Sbjct: 165 VVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEG 224
Query: 198 NFEKALIAYKKM---------VTDNVF--------------------------IDQHVLC 222
+ +A + KM +T N+ +D +
Sbjct: 225 MWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMI 284
Query: 223 STLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGC 282
L AC+ + A GK +H + + ++ + N L +YSK D+ A VF+
Sbjct: 285 IGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEE- 343
Query: 283 RNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLL 342
++ ++ +I+ GY ++++ E+A + ++ +G +PN T +S++ CA A L+HG
Sbjct: 344 NSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEF 403
Query: 343 HGQVVKFNFDRD-PFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGL 401
H +++ +D + ++LVD+Y K G + Q+ D + ++ + +L+ + G
Sbjct: 404 HCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGE 463
Query: 402 GRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYN 461
G A+ F EM G+KP+ VT V +L CSH+ +V +G F M YG+ P +H++
Sbjct: 464 GGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFS 523
Query: 462 CIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPE 521
C++DL GRAG L + +D I++MP++P+ W + L AC HG+ + K AA KL++++PE
Sbjct: 524 CMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPE 583
Query: 522 NSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPR 581
N G +VL++N+YA W + +R ++RD +KK PG +W+D + +F V D S P
Sbjct: 584 NPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPE 643
Query: 582 KKEIYEKLDSLLDQIK 597
Y LD L +K
Sbjct: 644 ACNTYPLLDGLNQLMK 659
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 199/440 (45%), Gaps = 44/440 (10%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ +++ C + +++ G+ +H + ++ N L+++Y + + A +LF
Sbjct: 143 DAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLF 202
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSV----------- 123
DRM +R+ VSW A+I + + EA + F +M G S + +
Sbjct: 203 DRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYV 262
Query: 124 ------------------------LQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLT 159
L+AC+ +G+I+ G ++H L + S + + + L
Sbjct: 263 GALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLI 322
Query: 160 DMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQH 219
MYSKC ++ A VF + W S+I GY + E+A ++M+ +
Sbjct: 323 TMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSI 382
Query: 220 VLCSTLSACTALKAFSFGKSLHAIIVKFG-FEYETFIGNALTDLYSKSGDMVSASNVFQS 278
L S L C + GK H I++ F+ T + N+L D+Y+KSG +V+A V
Sbjct: 383 TLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDL 442
Query: 279 DSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEH 338
S R+ V++T+++DGY + AL F ++ SGI+P+ T +++ AC++ +
Sbjct: 443 MSK-RDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHE 501
Query: 339 GSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVGV 395
G L + ++ + P + S +VD+YG+ G + + + P+ W TL+
Sbjct: 502 GERLFMK-MQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNA 560
Query: 396 FAQHG---LGRNAIETFNEM 412
HG +G+ A E EM
Sbjct: 561 CHIHGNTQIGKWAAEKLLEM 580
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 181/427 (42%), Gaps = 44/427 (10%)
Query: 98 FREALDTFCQMRAEGETASQ-----FALSSVLQACASLGSIQFGVQVHCLVVKSGFGCEL 152
+A TF +R + +A + +S+L AC + + GVQVH + SG
Sbjct: 19 LHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHS 78
Query: 153 FLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTD 212
L L YS ++A + E + W +I Y KN FE+ + AYK+MV+
Sbjct: 79 VLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSK 138
Query: 213 NVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSA 272
+ D S L AC +FG+ +H I ++ ++ NAL +Y + +M A
Sbjct: 139 GIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIA 198
Query: 273 SNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSL------ 326
+F R+ VS+ A+++ Y +A F + SG+E + T++ +
Sbjct: 199 RRLFDRMFE-RDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQ 257
Query: 327 -----------------------------IKACANQAKLEHGSLLHGQVVKFNFDRDPFV 357
+KAC+ + G +HG + ++D V
Sbjct: 258 TGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNV 317
Query: 358 SSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGL 417
+ L+ MY KC H++ +F + E + WN+++ +AQ A EM+ G
Sbjct: 318 RNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGF 377
Query: 418 KPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKL---K 474
+PN++T ++L C+ ++ G + + + +N ++D+ ++GK+ K
Sbjct: 378 QPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAK 437
Query: 475 EVEDFIN 481
+V D ++
Sbjct: 438 QVSDLMS 444
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 292 bits (748), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 175/633 (27%), Positives = 312/633 (49%), Gaps = 42/633 (6%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D A LIQ + + QLHA+++ P FL + L++ Y++ A+ +F
Sbjct: 21 DGGAYGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVF 80
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQ------MRAEGETASQFALSSVLQACA 128
D ++ RN S+ A++ + + +A F ++ ++S VL+A +
Sbjct: 81 DEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALS 140
Query: 129 SLGSIQFGV---QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVL 185
G QVH V++ GF ++F+G+ + Y+KC + A KVF+EM +D V
Sbjct: 141 GCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVS 200
Query: 186 WTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHV-LCSTLSACTALKAFSFGKSLHAII 244
W SMI GY ++G+FE YK M+ + F V + S AC FG +H +
Sbjct: 201 WNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKM 260
Query: 245 VKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYV-------- 296
++ + + + NA+ Y+K G + A +F S ++ V++ AI+ GY+
Sbjct: 261 IENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSE-KDSVTYGAIISGYMAHGLVKEA 319
Query: 297 -----EMDQL------------------EKALNAFIDLRNSGIEPNEFTFSSLIKACANQ 333
EM+ + E+ +N+F ++ G PN T SSL+ +
Sbjct: 320 MALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYS 379
Query: 334 AKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLV 393
+ L+ G +H ++ D + +V+++++D Y K G + ++FD ++ + AW ++
Sbjct: 380 SNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAII 439
Query: 394 GVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGV 453
+A HG +A F++M G KP+ VT +L +H+G + + F SM Y +
Sbjct: 440 TAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDI 499
Query: 454 MPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAY 513
P EHY C++ +L RAGKL + +FI+ MP +P A W + L GD E A+ A
Sbjct: 500 EPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACD 559
Query: 514 KLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFG 573
+L ++EPEN+G + +++N+Y + +WE+ +R ++ +KK+PG SW++ F
Sbjct: 560 RLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFI 619
Query: 574 VEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTE 606
+D S R KE+YE ++ L++ + Y+ + E
Sbjct: 620 AKDSSCERSKEMYEIIEGLVESMSDKEYIRKQE 652
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 291 bits (746), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 259/480 (53%), Gaps = 33/480 (6%)
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNG 197
+++ ++ G F+ + + D K ++ A ++F ++ + L+ S+I Y N
Sbjct: 28 KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87
Query: 198 NFEKALIAYKKMVTDNV-FIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIG 256
+ + YK+++ + D+ +C +L + GK +H + KFG +
Sbjct: 88 LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147
Query: 257 NALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKA------------ 304
NAL D+Y K D+V A VF + R+++S+ +++ GY + Q++KA
Sbjct: 148 NALIDMYMKFDDLVDAHKVF-DEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 305 -------------------LNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQ 345
++ F +++ +GIEP+E + S++ +CA LE G +H
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266
Query: 346 VVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNA 405
+ F + V +AL++MY KCG+ +IQLF ++E + +W+T++ +A HG A
Sbjct: 267 AERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGA 326
Query: 406 IETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIID 465
IETFNEM +KPN +TF+ LL CSH GM ++GL YF M + Y + P+ EHY C+ID
Sbjct: 327 IETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLID 386
Query: 466 LLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGA 525
+L RAGKL+ + +MP +P + W S L +C+T G+ + A +A L++LEPE+ G
Sbjct: 387 VLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGN 446
Query: 526 HVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEI 585
+VLL+NIYA +WEDV LRKMIR+ NMKK PG S +++ N F D S P EI
Sbjct: 447 YVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEI 506
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 198/407 (48%), Gaps = 37/407 (9%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
I + K ++ K+++A +I G +F+ +++ K ++DYA +LF+++S N
Sbjct: 13 FIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPN 72
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQM-RAEGETASQFALSSVLQACASLGSIQFGVQVH 140
+ + ++I + + + + + + Q+ R E +F + ++CASLGS G QVH
Sbjct: 73 VFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVH 132
Query: 141 CLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFE 200
+ K G + + L DMY K ++ DA KVF+EM +D + W S++ GY + G +
Sbjct: 133 GHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMK 192
Query: 201 KA-----------LIAYKKMVTDNVFI--------------------DQHVLCSTLSACT 229
KA ++++ M++ I D+ L S L +C
Sbjct: 193 KAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCA 252
Query: 230 ALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFT 289
L + GK +H + GF +T + NAL ++YSK G + A +F G ++++S++
Sbjct: 253 QLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEG-KDVISWS 311
Query: 290 AIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF 349
++ GY A+ F +++ + ++PN TF L+ AC++ + G L + +++
Sbjct: 312 TMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEG-LRYFDMMRQ 370
Query: 350 NFDRDPFVS--SALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLV 393
++ +P + L+D+ + G + ++++ + P+ W +L+
Sbjct: 371 DYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLL 417
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 125/265 (47%), Gaps = 31/265 (11%)
Query: 4 RNLFRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSK 63
+ L R +L D + ++CA GKQ+H L + G N L+++Y K
Sbjct: 97 KQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMK 156
Query: 64 CGELDYAIKLFDRMSKRN-------------------------------MVSWTAMITGF 92
+L A K+FD M +R+ +VSWTAMI+G+
Sbjct: 157 FDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGY 216
Query: 93 FRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCEL 152
+ EA+D F +M+ G + +L SVL +CA LGS++ G +H + GF +
Sbjct: 217 TGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQT 276
Query: 153 FLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTD 212
+ + L +MYSKCG +S A ++F +M KD + W++MI GY +GN A+ + +M
Sbjct: 277 GVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRA 336
Query: 213 NVFIDQHVLCSTLSACTALKAFSFG 237
V + LSAC+ + + G
Sbjct: 337 KVKPNGITFLGLLSACSHVGMWQEG 361
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 16/205 (7%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D ++ ++ +CAQ L GK +H R G L T + N L+ +YSKCG + AI+LF
Sbjct: 240 DEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLF 299
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+M ++++SW+ MI+G+ A++TF +M+ + +L AC+ +G Q
Sbjct: 300 GQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQ 359
Query: 135 FGVQVHCLVVK--------SGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVL 185
G++ ++ + +GC L D+ ++ G++ A ++ + MP K D +
Sbjct: 360 EGLRYFDMMRQDYQIEPKIEHYGC-------LIDVLARAGKLERAVEITKTMPMKPDSKI 412
Query: 186 WTSMIDGYVKNGNFEKALIAYKKMV 210
W S++ GN + AL+A +V
Sbjct: 413 WGSLLSSCRTPGNLDVALVAMDHLV 437
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 184/601 (30%), Positives = 323/601 (53%), Gaps = 27/601 (4%)
Query: 3 SRNLFRFRHKLCDSKAVAQLIQTCAQAKELSK-GKQLHAQLIRGGCLPCTFLT-NHLLNL 60
S LF + S + ++ Q EL K GK A+ + G +T H++
Sbjct: 27 SVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITG 86
Query: 61 YSKCGELDYAIKLFDRM-SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFA 119
Y K G++ A +LFDR+ S++N+V+WTAM++G+ RS + A F +M + +
Sbjct: 87 YIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEM----PERNVVS 142
Query: 120 LSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP 179
++++ A G I +++ + + + +++ + G + +A +FE MP
Sbjct: 143 WNTMIDGYAQSGRIDKALELFDEMPERN----IVSWNSMVKALVQRGRIDEAMNLFERMP 198
Query: 180 CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKS 239
+D V WT+M+DG KNG ++A + M N+ I + + + + +
Sbjct: 199 RRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI-ISWNAMITGYAQNNRIDE---ADQ 254
Query: 240 LHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMD 299
L ++ + F N + + ++ +M A +F +N++S+T ++ GYVE
Sbjct: 255 LFQVMPERDFAS----WNTMITGFIRNREMNKACGLFDRMPE-KNVISWTTMITGYVENK 309
Query: 300 QLEKALNAFID-LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS 358
+ E+ALN F LR+ ++PN T+ S++ AC++ A L G +H + K ++ V+
Sbjct: 310 ENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVT 369
Query: 359 SALVDMYGKCGLFDHSIQLFDE--IENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRG 416
SAL++MY K G + ++FD + + +WN+++ V+A HG G+ AIE +N+M G
Sbjct: 370 SALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHG 429
Query: 417 LKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEV 476
KP+AVT++NLL CSHAG+VE G+ +F + + + REEHY C++DL GRAG+LK+V
Sbjct: 430 FKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDV 489
Query: 477 EDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKE 536
+FIN + + + L AC H + AK K+++ +++G +VL+SNIYA
Sbjct: 490 TNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAAN 549
Query: 537 RQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQI 596
+ E+ +R +++ +KK PG SWV +G + H+F V D SHP+ +E LDS+L +
Sbjct: 550 GKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQ----FEALDSILSDL 605
Query: 597 K 597
+
Sbjct: 606 R 606
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/565 (30%), Positives = 305/565 (53%), Gaps = 14/565 (2%)
Query: 35 GKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFR 94
G+++H +IR G + + N +L +Y+ L A KLFD MS+R+++SW+ +I + +
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQ 202
Query: 95 SLRFREALDTFCQMRAEGETASQ-FALSSVLQACASLGSIQFGVQVHCLVVKSGFG-CEL 152
S L F +M E +T ++SVL+AC + I G VH ++ GF ++
Sbjct: 203 SKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADV 262
Query: 153 FLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTD 212
F+ ++L DMYSK +V A +VF+E C++ V W S++ G+V N +++AL + MV +
Sbjct: 263 FVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQE 322
Query: 213 NVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSA 272
V +D+ + S L C + KS+H +I++ G+E ++L D Y+ + A
Sbjct: 323 AVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDA 382
Query: 273 SNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACAN 332
V S + +++VS + ++ G + ++A++ F +R++ PN T SL+ AC+
Sbjct: 383 GTVLDSMT-YKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSV 438
Query: 333 QAKLEHGSLLHGQVVKFNFD-RDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNT 391
A L HG ++ + D V +++VD Y KCG + + + FD+I N +W
Sbjct: 439 SADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTV 498
Query: 392 LVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIY 451
++ +A +GL A+ F+EM +G PNAVT++ L C+H G+V+ GL F SM +
Sbjct: 499 IISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVE-E 557
Query: 452 GVMPREEHYNCIIDLLGRAGKLKEVEDFINSMP--FEPTAFGWCSFLGACKTHGDKE--R 507
P +HY+CI+D+L RAG++ + I ++P + A W + L C+ K
Sbjct: 558 DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIIT 617
Query: 508 AKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGN 567
+++ A ++++LEP S ++L S+ +A E+ WEDV +R+++++ ++ + GYS V GN
Sbjct: 618 SEVVA-EVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGN 676
Query: 568 ETHVFGVEDWSHPRKKEIYEKLDSL 592
F D E+ + + SL
Sbjct: 677 LAKRFLAGDKLSQSDSELNDVVQSL 701
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 200/388 (51%), Gaps = 11/388 (2%)
Query: 48 LPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQ 107
L F N + + Y KCG+L ++ FD M+ R+ VSW ++ G E L F +
Sbjct: 58 LSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSK 117
Query: 108 MRAEGETASQFALSSVLQACASLGSIQF-GVQVHCLVVKSGFGCELFLGSNLTDMYSKCG 166
+R G + L V+ AC SL F G ++H V++SGF + +++ MY+
Sbjct: 118 LRVWGFEPNTSTLVLVIHACRSL---WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSD 174
Query: 167 EVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTD-NVFIDQHVLCSTL 225
+S A K+F+EM +D + W+ +I YV++ L +K+MV + D + S L
Sbjct: 175 SLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVL 233
Query: 226 SACTALKAFSFGKSLHAIIVKFGFEY-ETFIGNALTDLYSKSGDMVSASNVFQSDSGCRN 284
ACT ++ G+S+H ++ GF+ + F+ N+L D+YSK D+ SA VF ++ CRN
Sbjct: 234 KACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFD-ETTCRN 292
Query: 285 IVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHG 344
IVS+ +I+ G+V + ++AL F + +E +E T SL++ C + +HG
Sbjct: 293 IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHG 352
Query: 345 QVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRN 404
+++ ++ + S+L+D Y C L D + + D + + + +T++ A G
Sbjct: 353 VIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDE 412
Query: 405 AIETFNEMVDRGLKPNAVTFVNLLKGCS 432
AI F M D PNA+T ++LL CS
Sbjct: 413 AISIFCHMRD---TPNAITVISLLNACS 437
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 130/550 (23%), Positives = 237/550 (43%), Gaps = 78/550 (14%)
Query: 97 RFREALDTFCQM-RAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLG 155
++RE + + ++ RA + F V +ACA L LF G
Sbjct: 24 KWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLS-------------------WLFQG 64
Query: 156 SNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVF 215
+++ D Y KCG++ + F+ M +D V W ++ G + G E+ L + K+
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 216 IDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNV 275
+ L + AC +L + G+ +H +++ GF + + N++ +Y+ S D +SA +
Sbjct: 125 PNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADS-DSLSARKL 181
Query: 276 FQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL-RNSGIEPNEFTFSSLIKACANQA 334
F S R+++S++ ++ YV+ + L F ++ + EP+ T +S++KAC
Sbjct: 182 FDEMSE-RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME 240
Query: 335 KLEHGSLLHGQVVKFNFD-RDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLV 393
++ G +HG ++ FD D FV ++L+DMY K D + ++FDE N +WN+++
Sbjct: 241 DIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSIL 300
Query: 394 GVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS-----------HAGMVEDG-- 440
F + A+E F+ MV ++ + VT V+LL+ C H ++ G
Sbjct: 301 AGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYE 360
Query: 441 ---------LNYFYS------MDKIYGVMPREEHYNC--IIDLLGRAGKLKEVEDFINSM 483
++ + S + M ++ +C +I L AG+ E M
Sbjct: 361 SNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM 420
Query: 484 PFEPTAFGWCSFLGACKTHGDKERAK----LAAYKLMKLEPENSGAHVLLSNIYAKERQW 539
P A S L AC D +K +A + + + + G ++ + YAK
Sbjct: 421 RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIV--DAYAKCGAI 478
Query: 540 EDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIV 599
E R I + N+ SW I + + G+ D K +L D++K
Sbjct: 479 EMARRTFDQITEKNI-----ISWTVIISAYAINGLPD-----------KALALFDEMKQK 522
Query: 600 GYVPQTESVL 609
GY P + L
Sbjct: 523 GYTPNAVTYL 532
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 107/215 (49%), Gaps = 4/215 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D V L++ C ++ K +H +IR G + L++ Y+ C +D A +
Sbjct: 327 DEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVL 386
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
D M+ +++VS + MI+G + R EA+ FC MR +T + + S+L AC+ ++
Sbjct: 387 DSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLR 443
Query: 135 FGVQVHCLVVKSGFGC-ELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
H + ++ ++ +G+++ D Y+KCG + A + F+++ K+ + WT +I Y
Sbjct: 444 TSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAY 503
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSAC 228
NG +KAL + +M + + LSAC
Sbjct: 504 AINGLPDKALALFDEMKQKGYTPNAVTYLAALSAC 538
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 285 bits (729), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 174/557 (31%), Positives = 287/557 (51%), Gaps = 29/557 (5%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTF-LTNHLLNLYSKCGELDYAIKL 73
D V + C +G+ +H +R + N ++++Y KCG A L
Sbjct: 392 DIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELL 451
Query: 74 FDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVL---QACASL 130
F + R++VSW +MI+ F ++ +A + F ++ +E + S+F+LS+VL +C S
Sbjct: 452 FKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE-YSCSKFSLSTVLAILTSCDSS 510
Query: 131 GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMI 190
S+ FG VHC + K G +LT + + +S+ +D W S+I
Sbjct: 511 DSLIFGKSVHCWLQKLG---------DLTSAFLRLETMSET---------RDLTSWNSVI 552
Query: 191 DGYVKNGNFEKALIAYKKMVTDN-VFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF 249
G +G+ ++L A++ M + + D L T+SA L G+ H + +K
Sbjct: 553 SGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLR 612
Query: 250 EYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFI 309
E +T + N L +Y + D+ SA VF S N+ S+ ++ + Q + F
Sbjct: 613 ELDTQLQNTLITMYGRCKDIESAVKVFGLISD-PNLCSWNCVISA---LSQNKAGREVFQ 668
Query: 310 DLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCG 369
RN +EPNE TF L+ A +G H +++ F +PFVS+ALVDMY CG
Sbjct: 669 LFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCG 728
Query: 370 LFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRG-LKPNAVTFVNLL 428
+ + +++F + +AWN+++ HG+G A+E F E+ ++PN +F++LL
Sbjct: 729 MLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLL 788
Query: 429 KGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPT 488
CSH+G +++GL+Y+ M++ +GV P EH I+D+LGRAGKL+E +FI +
Sbjct: 789 SACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQK 848
Query: 489 AFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKM 548
A W + L AC HGD + K A L ++EP+N+ ++ L+N Y WE+ LRKM
Sbjct: 849 AGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKM 908
Query: 549 IRDGNMKKLPGYSWVDI 565
+ D +KKLPGYS +D+
Sbjct: 909 VEDNALKKLPGYSVIDV 925
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 197/388 (50%), Gaps = 5/388 (1%)
Query: 31 ELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMIT 90
E + +H ++ G L ++ LL Y + GEL + LFD + +++++ W +MIT
Sbjct: 102 ETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMIT 161
Query: 91 GFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGC 150
++ R+ A+ F +M +G L A +SL + +HCL +++G
Sbjct: 162 ALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVG 221
Query: 151 ELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMV 210
+ L + L ++Y+K +S A VF M +D V W +++ + NG+ K+L +K M
Sbjct: 222 DSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMT 281
Query: 211 TDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF--IGNALTDLYSKSGD 268
D +SAC++++ + G+SLH +++K G+ E +GN++ +YSK GD
Sbjct: 282 GSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGD 341
Query: 269 MVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN-SGIEPNEFTFSSLI 327
+A VF+ + CR+++S AI++G+ E+A +++ I+P+ T S+
Sbjct: 342 TEAAETVFE-ELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSIT 400
Query: 328 KACANQAKLEHGSLLHGQVVKFNFD-RDPFVSSALVDMYGKCGLFDHSIQLFDEIENPND 386
C + + G +HG V+ R V ++++DMYGKCGL + LF + +
Sbjct: 401 SICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDL 460
Query: 387 TAWNTLVGVFAQHGLGRNAIETFNEMVD 414
+WN+++ F+Q+G A F E+V
Sbjct: 461 VSWNSMISAFSQNGFTHKAKNLFKEVVS 488
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 94/195 (48%), Gaps = 1/195 (0%)
Query: 238 KSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVE 297
+S+H +K G + + L Y ++G++VS+S +F + ++++ + +++ +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFD-ELKEKDVIVWNSMITALNQ 165
Query: 298 MDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFV 357
+ A+ FI++ + G E + T A ++ S+LH ++ D +
Sbjct: 166 NGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSL 225
Query: 358 SSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGL 417
+AL+++Y K + +F +E+ + +WNT++ +G R +++ F M G
Sbjct: 226 CNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ 285
Query: 418 KPNAVTFVNLLKGCS 432
+ + VTF ++ CS
Sbjct: 286 EADTVTFSCVISACS 300
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 195/647 (30%), Positives = 321/647 (49%), Gaps = 85/647 (13%)
Query: 22 LIQTCAQAKELSKGKQLHAQL-IRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKR 80
+I A+ ++SK Q+ ++ +R +T + N KC +L A +LF + ++
Sbjct: 87 MISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKN---KC-DLGKAYELFCDIPEK 142
Query: 81 NMVSWTAMITGFFRSLRFREALDTFCQ--MRAEGETASQFALSSVLQACASLGSIQFGVQ 138
N VS+ MITGF R+ RF EA + + ++ AS LS L+A G V+
Sbjct: 143 NAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRA----GKWNEAVR 198
Query: 139 V-HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNG 197
V + VK C S++ Y K G + DA +F+ M ++ + WT+MIDGY K G
Sbjct: 199 VFQGMAVKEVVSC-----SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAG 253
Query: 198 NFEKALIAYKKMVTD-NVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIG 256
FE + +M + +V ++ + L AC + G +H ++ + E++ F+G
Sbjct: 254 FFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLG 313
Query: 257 NALTDLYSKSG----------------------------------------------DMV 270
N+L +YSK G DMV
Sbjct: 314 NSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMV 373
Query: 271 SASNVFQSDSGCRNI---------------VSFTAIVDGYVEMDQLEKALNAFIDLRNSG 315
S +++ + SG I +++TA++ +V E+AL F +
Sbjct: 374 SWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKE 433
Query: 316 IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSI 375
+ PN +TFSS++ A A+ A L G +HG+VVK N D V ++LV MY KCG + +
Sbjct: 434 VCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAY 493
Query: 376 QLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAG 435
++F I PN ++NT++ ++ +G G+ A++ F+ + G +PN VTF+ LL C H G
Sbjct: 494 KIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG 553
Query: 436 MVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSF 495
V+ G YF SM Y + P +HY C++DLLGR+G L + + I++MP +P + W S
Sbjct: 554 YVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSL 613
Query: 496 LGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYA---KERQWEDVRCLRKMIRDG 552
L A KTH + A+LAA KL++LEP+++ +V+LS +Y+ K R + + ++K R
Sbjct: 614 LSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKR-- 671
Query: 553 NMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIV 599
+KK PG SW+ + E H F D S +EI L + +++++
Sbjct: 672 -IKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKEMELI 717
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 171/387 (44%), Gaps = 42/387 (10%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
+S +A + + C +G Q+H + R FL N L+++YSK G + A +F
Sbjct: 274 NSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF 333
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
M ++ VSW ++ITG + + EA + F +M
Sbjct: 334 GVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMP------------------------- 368
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G ++ +++ +S GE+S ++F MP KD + WT+MI +V
Sbjct: 369 --------------GKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFV 414
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
NG +E+AL + KM+ V + + S LSA +L G +H +VK +
Sbjct: 415 SNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLS 474
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
+ N+L +Y K G+ A +F S NIVS+ ++ GY +KAL F L +S
Sbjct: 475 VQNSLVSMYCKCGNTNDAYKIFSCISE-PNIVSYNTMISGYSYNGFGKKALKLFSMLESS 533
Query: 315 GIEPNEFTFSSLIKACANQAKLEHG-SLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
G EPN TF +L+ AC + ++ G +N + P + +VD+ G+ GL D
Sbjct: 534 GKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDD 593
Query: 374 SIQLFDEIE-NPNDTAWNTLVGVFAQH 399
+ L + P+ W +L+ H
Sbjct: 594 ASNLISTMPCKPHSGVWGSLLSASKTH 620
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 166/405 (40%), Gaps = 73/405 (18%)
Query: 162 YSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKM-VTDNVFIDQHV 220
+++ G + +A +F +M + V W +MI Y +NG KA + +M V + +
Sbjct: 60 HARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMI 119
Query: 221 LCSTLSACTALKAF------------SFGKSLHAIIVKFGFEYETFI------------- 255
+ C KA+ S+ + + F+ F+
Sbjct: 120 TAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVA 179
Query: 256 GNALTDLYSKSGDMVSASNVFQSDS-----GC-------------------------RNI 285
N L Y ++G A VFQ + C RN+
Sbjct: 180 SNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNV 239
Query: 286 VSFTAIVDGYVEMDQLEKALNAFIDLRNSG-IEPNEFTFSSLIKACANQAKLEHGSLLHG 344
+++TA++DGY + E F+ +R G ++ N T + + KAC + + GS +HG
Sbjct: 240 ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHG 299
Query: 345 QVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRN 404
V + + D F+ ++L+ MY K G + +F ++N + +WN+L+ Q
Sbjct: 300 LVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISE 359
Query: 405 AIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEH--YNC 462
A E F +M + + V++ +++KG S G + + +++G+MP +++ +
Sbjct: 360 AYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCV-------ELFGMMPEKDNITWTA 408
Query: 463 IIDLLGRAGKLKEVEDFINSMPFE---PTAFGWCSFLGACKTHGD 504
+I G +E + + M + P ++ + S L A + D
Sbjct: 409 MISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLAD 453
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 102/201 (50%), Gaps = 8/201 (3%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
+S + ++ A +L +G Q+H ++++ + + N L+++Y KCG + A K+F
Sbjct: 437 NSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF 496
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+S+ N+VS+ MI+G+ + ++AL F + + G+ + ++L AC +G +
Sbjct: 497 SCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVD 556
Query: 135 FGVQVHCLVVKSGFGCELFLGSN----LTDMYSKCGEVSDACKVFEEMPCKDEV-LWTSM 189
G + + +KS + E G + + D+ + G + DA + MPCK +W S+
Sbjct: 557 LGWK-YFKSMKSSYNIEP--GPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSL 613
Query: 190 IDGYVKNGNFEKALIAYKKMV 210
+ + + A +A KK++
Sbjct: 614 LSASKTHLRVDLAELAAKKLI 634
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 184/658 (27%), Positives = 327/658 (49%), Gaps = 97/658 (14%)
Query: 3 SRNLFRFRHKLCDS-KAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLY 61
SR F F + D+ +A+ + +CA + +++ G+Q+H ++++ G ++ N +LN+Y
Sbjct: 27 SRTHFDFSGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMY 86
Query: 62 SKC-------------GELDYA------------------IKLFDRMSKRNMVSWTAMIT 90
+KC +LD A +KLFD M +R+ VS+T +I
Sbjct: 87 AKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIK 146
Query: 91 GFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGC 150
G+ ++ ++ EA++ F +MR G ++ L++V+ AC+ LG I + L +K
Sbjct: 147 GYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEG 206
Query: 151 ELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKA-------- 202
+F+ +NL MY C + DA K+F+EMP ++ V W M++GY K G E+A
Sbjct: 207 RVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQIT 266
Query: 203 -----------------------LIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKS 239
L+ Y +M+ + + ++ LSA S G
Sbjct: 267 EKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQ 326
Query: 240 LHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS--------------------- 278
LH IVK GF+ F+ + Y+ S D+ A F++
Sbjct: 327 LHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGM 386
Query: 279 ---------DSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL-RNSGIEPNEFTFSSLIK 328
+ ++I S+ A++ GY + + AL+ F ++ +S ++P+ T S+
Sbjct: 387 VEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFS 446
Query: 329 ACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTA 388
A ++ LE G H + + +++A++DMY KCG + ++ +F + +N + +
Sbjct: 447 AISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSST 506
Query: 389 ---WNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFY 445
WN ++ A HG + A++ ++++ +KPN++TFV +L C HAG+VE G YF
Sbjct: 507 ISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFE 566
Query: 446 SMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDK 505
SM +G+ P +HY C++DLLG+AG+L+E ++ I MP + W L A +THG+
Sbjct: 567 SMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNV 626
Query: 506 ERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWV 563
E A+LAA +L ++P + G V+LSN+YA +WEDV +R+ +R +++ +S V
Sbjct: 627 EIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGV 684
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 180/659 (27%), Positives = 309/659 (46%), Gaps = 92/659 (13%)
Query: 21 QLIQTCAQAKELSKGKQLHAQLI------RGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
L+ C A++ +Q+HAQ++ R G L +L+++Y++ G L A +F
Sbjct: 61 HLLGLCLTAQQC---RQVHAQVLLSDFIFRSGSLAA-----NLISVYARLGLLLDARNVF 112
Query: 75 DRMSK---RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLG 131
+ +S ++ W +++ + AL+ + MR G T + L +L+AC LG
Sbjct: 113 ETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLG 172
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK---------- 181
H V++ G L + + L +Y K G + DA +F EMP +
Sbjct: 173 RFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIK 232
Query: 182 -------------------------DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFI 216
DEV WTS++ + + G FE L + M +
Sbjct: 233 GFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAV 292
Query: 217 DQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVF 276
L S C L+A S + +H ++K GFE NAL +Y K G + A ++F
Sbjct: 293 SGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLF 352
Query: 277 QSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSG----IEPNEFTFSSLIKACAN 332
+ + I S+ +++ +V+ +L++AL+ F +L ++ N T++S+IK C
Sbjct: 353 RQIRN-KGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNV 411
Query: 333 QAK-----------------------------------LEHGSLLHGQVVKFNFDRDPFV 357
Q + L G +HG V++ + + V
Sbjct: 412 QGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILV 471
Query: 358 SSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGL 417
+ALV+MY KCGL +F+ I + + +WN+++ + HG A+ F+ M+ G
Sbjct: 472 QNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGF 531
Query: 418 KPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVE 477
P+ + V +L CSHAG+VE G FYSM K +G+ P++EHY CI+DLLGR G LKE
Sbjct: 532 HPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEAS 591
Query: 478 DFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKER 537
+ + +MP EP + L +C+ H + + A+ A +L LEPE +G+++LLSNIY+
Sbjct: 592 EIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGG 651
Query: 538 QWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQI 596
+WE+ +R + + ++KK+ G SW+++ + + F + IY L+ L+ +
Sbjct: 652 RWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHM 710
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 178/446 (39%), Gaps = 76/446 (17%)
Query: 7 FRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGE 66
R R D + +++ C + H Q+I+ G + N LL LY K G
Sbjct: 149 MRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGR 208
Query: 67 LDYAIKLFDRMSKRNMVSWTAMITGFFRSL------------------------------ 96
+ A LF M RN +SW MI GF +
Sbjct: 209 MGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSC 268
Query: 97 -----RFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCE 151
+F + L F MR G S AL+ CA L ++ +VH V+K GF
Sbjct: 269 HSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEY 328
Query: 152 LFLGSNLTDMYSKCGEVSDACKVFEEMPCK------------------DEVL-------- 185
L + L +Y K G+V DA +F ++ K DE L
Sbjct: 329 LPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEE 388
Query: 186 -------------WTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALK 232
WTS+I G G + +L +++M V + +C LS C L
Sbjct: 389 MNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELP 448
Query: 233 AFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIV 292
A + G+ +H +++ + NAL ++Y+K G + S VF++ ++++S+ +I+
Sbjct: 449 ALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRD-KDLISWNSII 507
Query: 293 DGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHG-SLLHGQVVKFNF 351
GY EKAL+ F + +SG P+ +++ AC++ +E G + + +F
Sbjct: 508 KGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGL 567
Query: 352 DRDPFVSSALVDMYGKCGLFDHSIQL 377
+ + +VD+ G+ G + ++
Sbjct: 568 EPQQEHYACIVDLLGRVGFLKEASEI 593
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 144/314 (45%), Gaps = 40/314 (12%)
Query: 5 NLFRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSK- 63
+L R +A+A CA+ + LS +++H +I+GG N L+++Y K
Sbjct: 283 HLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQ 342
Query: 64 ------------------------------CGELDYAIKLFDRMS--------KRNMVSW 85
G+LD A+ LF + K N+V+W
Sbjct: 343 GKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTW 402
Query: 86 TAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVK 145
T++I G R ++L+ F QM+ A+ + +L CA L ++ G ++H V++
Sbjct: 403 TSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIR 462
Query: 146 SGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIA 205
+ + + + L +MY+KCG +S+ VFE + KD + W S+I GY +G EKAL
Sbjct: 463 TSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSM 522
Query: 206 YKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSL-HAIIVKFGFEYETFIGNALTDLYS 264
+ +M++ D L + LSAC+ G+ + +++ +FG E + + DL
Sbjct: 523 FDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLG 582
Query: 265 KSGDMVSASNVFQS 278
+ G + AS + ++
Sbjct: 583 RVGFLKEASEIVKN 596
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 92/179 (51%), Gaps = 1/179 (0%)
Query: 7 FRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGE 66
+F L +S + ++ CA+ L+ G+++H +IR + N L+N+Y+KCG
Sbjct: 425 MQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGL 484
Query: 67 LDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQA 126
L +F+ + ++++SW ++I G+ +AL F +M + G AL +VL A
Sbjct: 485 LSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSA 544
Query: 127 CASLGSIQFGVQV-HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEV 184
C+ G ++ G ++ + + + G + + + D+ + G + +A ++ + MP + +V
Sbjct: 545 CSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKV 603
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 174/567 (30%), Positives = 292/567 (51%), Gaps = 11/567 (1%)
Query: 19 VAQLIQTCA-QAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAI-KLFDR 76
+ +I+ CA Q + G QLH ++ G T ++N L+++Y+K YA+ K+FD
Sbjct: 49 LPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSR-KYAVRKVFDE 107
Query: 77 MSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSI-QF 135
M R+ VS+ ++I + EA+ +M G ++S+L C +GS +
Sbjct: 108 MLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKV 167
Query: 136 GVQVHCLV-VKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
H LV V + L + L DMY K + + A VF++M K+EV WT+MI G V
Sbjct: 168 ARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCV 227
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALK-AFSFGKSLHAIIVKFGFEYET 253
N N+E + ++ M +N+ ++ L S L AC L S K +H + G +
Sbjct: 228 ANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADE 287
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
+ A +Y + G+ VS S V S R++V +++++ GY E + +N +R
Sbjct: 288 RLTAAFMTMYCRCGN-VSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRK 346
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
GIE N T +++ AC N L S +H Q++K F + +AL+DMY KCG
Sbjct: 347 EGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSA 406
Query: 374 SIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSH 433
+ ++F E+ + +W++++ + HG G A+E F M+ G + + + F+ +L C+H
Sbjct: 407 AREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNH 466
Query: 434 AGMVEDGLNYFYSMDKIYGVMPRE-EHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGW 492
AG+VE+ F K + MP EHY C I+LLGR GK+ + + +MP +P+A W
Sbjct: 467 AGLVEEAQTIFTQAGKYH--MPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIW 524
Query: 493 CSFLGACKTHGDKERA-KLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRD 551
S L AC+THG + A K+ A +LMK EP+N +VLLS I+ + + +R++++
Sbjct: 525 SSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQR 584
Query: 552 GNMKKLPGYSWVDIGNETHVFGVEDWS 578
+ K G+S ++ + + + WS
Sbjct: 585 RKLNKCYGFSKIEPELQIEDYQGKSWS 611
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 103/214 (48%), Gaps = 3/214 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
+S + ++ C + LS +H+Q+++ G + L N L+++Y+KCG L A ++F
Sbjct: 352 NSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVF 411
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
++++++VSW++MI + EAL+ F M G A ++L AC G ++
Sbjct: 412 YELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVE 471
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEV-LWTSMIDGY 193
+ K L + ++ + G++ DA +V MP K +W+S++
Sbjct: 472 EAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSAC 531
Query: 194 VKNGNFEKA--LIAYKKMVTDNVFIDQHVLCSTL 225
+G + A +IA + M ++ +VL S +
Sbjct: 532 ETHGRLDVAGKIIANELMKSEPDNPANYVLLSKI 565
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 178/605 (29%), Positives = 307/605 (50%), Gaps = 52/605 (8%)
Query: 14 CDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHL-----------LNLYS 62
C + ++ +C + +++ Q+H +LI+ G + + LT + L ++
Sbjct: 10 CSISSTIHVLGSCKTSDDVN---QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFA 66
Query: 63 KCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSS 122
+C +Y + F + W A+I R+AL C M G + +F+LS
Sbjct: 67 RCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSL 126
Query: 123 VLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKD 182
VL+AC+ LG ++ G+Q+H + K+G +LFL + L +Y KCG + + ++F+ MP +D
Sbjct: 127 VLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRD 186
Query: 183 EVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHA 242
V + SMIDGYVK G LI + + D + ++ L S S + S G + +
Sbjct: 187 SVSYNSMIDGYVKCG-----LIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIAS 241
Query: 243 IIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEM---- 298
+ E + N++ D Y K G + A +F R++V++ ++DGY ++
Sbjct: 242 KLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPR-RDVVTWATMIDGYAKLGFVH 300
Query: 299 ------DQLE---------------------KALNAFIDL-RNSGIEPNEFTFSSLIKAC 330
DQ+ +AL F D+ + S + P++ T ++ A
Sbjct: 301 HAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAI 360
Query: 331 ANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWN 390
A +L +H +V+ F + AL+DMY KCG H++ +F+ IEN + WN
Sbjct: 361 AQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWN 420
Query: 391 TLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKI 450
++G A HGLG +A + ++ LKP+ +TFV +L CSH+G+V++GL F M +
Sbjct: 421 AMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRK 480
Query: 451 YGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKL 510
+ + PR +HY C++D+L R+G ++ ++ I MP EP W +FL AC H + E +L
Sbjct: 481 HKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGEL 540
Query: 511 AAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETH 570
A L+ N ++VLLSN+YA W+DVR +R M+++ ++K+PG SW+++ H
Sbjct: 541 VAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVH 600
Query: 571 VFGVE 575
F V+
Sbjct: 601 EFFVD 605
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 214/347 (61%), Gaps = 4/347 (1%)
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL-RN 313
+ NA+ Y + GDM +A +F S +N+ S+T ++ G+ + +AL F+ + ++
Sbjct: 150 VWNAMITGYQRRGDMKAAMELFDSMPR-KNVTSWTTVISGFSQNGNYSEALKMFLCMEKD 208
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
++PN T S++ ACAN +LE G L G + F + +V +A ++MY KCG+ D
Sbjct: 209 KSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDV 268
Query: 374 SIQLFDEIENP-NDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
+ +LF+E+ N N +WN+++G A HG A+ F +M+ G KP+AVTFV LL C
Sbjct: 269 AKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACV 328
Query: 433 HAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGW 492
H GMV G F SM++++ + P+ EHY C+IDLLGR GKL+E D I +MP +P A W
Sbjct: 329 HGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVW 388
Query: 493 CSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDG 552
+ LGAC HG+ E A++A+ L KLEP N G V++SNIYA +W+ V +RK+++
Sbjct: 389 GTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKE 448
Query: 553 NMKKLPGYSW-VDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKI 598
M K GYS+ V++G + H F VED SHPR EIY+ L+ + ++K+
Sbjct: 449 TMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKL 495
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 168/404 (41%), Gaps = 48/404 (11%)
Query: 36 KQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRS 95
KQLHA +R G L LL + L YA KLFD + +I ++
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 96 LRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLG 155
+ E++ + + +G S + + A AS S + +H +SGF + F
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCC 120
Query: 156 SNLTDMYSKCGEVSDACKVFEEM-------------------------------PCKDEV 184
+ L Y+K G + A +VF+EM P K+
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 185 LWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHV-LCSTLSACTALKAFSFGKSLHAI 243
WT++I G+ +NGN+ +AL + M D H+ + S L AC L G+ L
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 244 IVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEK 303
+ GF ++ NA ++YSK G + A +F+ RN+ S+ +++ + ++
Sbjct: 241 ARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDE 300
Query: 304 ALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSAL-- 361
AL F + G +P+ TF L+ AC + G ++ GQ + + + +S L
Sbjct: 301 ALTLFAQMLREGEKPDAVTFVGLLLACVHG-----GMVVKGQELFKSMEEVHKISPKLEH 355
Query: 362 ----VDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHG 400
+D+ G+ G + L + P+ W TL+G + HG
Sbjct: 356 YGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 17/198 (8%)
Query: 18 AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM 77
V ++ CA EL G++L G ++ N + +YSKCG +D A +LF+ +
Sbjct: 217 TVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEEL 276
Query: 78 -SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFG 136
++RN+ SW +MI + EAL F QM EGE +L AC G + G
Sbjct: 277 GNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKG 336
Query: 137 V-------QVHCLVVK-SGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVLWT 187
+VH + K +GC + D+ + G++ +A + + MP K D V+W
Sbjct: 337 QELFKSMEEVHKISPKLEHYGC-------MIDLLGRVGKLQEAYDLIKTMPMKPDAVVWG 389
Query: 188 SMIDGYVKNGNFEKALIA 205
+++ +GN E A IA
Sbjct: 390 TLLGACSFHGNVEIAEIA 407
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 115/278 (41%), Gaps = 50/278 (17%)
Query: 288 FTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVV 347
+ ++ Y Q +++ + L G+ P+ TF+ + A A+ + LLH Q
Sbjct: 50 YNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFF 109
Query: 348 KFNFDRDPFVSSALVDMYGKCG-------LFDH------------------------SIQ 376
+ F+ D F + L+ Y K G +FD +++
Sbjct: 110 RSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAME 169
Query: 377 LFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEM-VDRGLKPNAVTFVNLLKGCSHAG 435
LFD + N T+W T++ F+Q+G A++ F M D+ +KPN +T V++L C++ G
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 436 MVEDGL--------NYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEP 487
+E G N F+ D IY N I++ + G + + + +
Sbjct: 230 ELEIGRRLEGYARENGFF--DNIYVC-------NATIEMYSKCGMIDVAKRLFEELGNQR 280
Query: 488 TAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGA 525
W S +G+ THG + A L + M E E A
Sbjct: 281 NLCSWNSMIGSLATHGKHDEA-LTLFAQMLREGEKPDA 317
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 275 bits (703), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 172/554 (31%), Positives = 284/554 (51%), Gaps = 57/554 (10%)
Query: 21 QLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKC----GELDYAIKLFDR 76
+L Q C + L KQ+HA ++ G + + L+ YS G L YA KLFD
Sbjct: 17 KLWQNCKNIRTL---KQIHASMVVNGLMSNLSVVGELI--YSASLSVPGALKYAHKLFDE 71
Query: 77 MSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFG 136
+ K ++ ++ G +S++ + + + +M G + ++ + VL+AC+ L G
Sbjct: 72 IPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNG 131
Query: 137 VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKN 196
H VV+ GF ++ + L ++ CG++ A ++F++ +V W+SM GY K
Sbjct: 132 FAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKR 191
Query: 197 GNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIG 256
G ++A+ + +M + DQ ++ C K
Sbjct: 192 GKIDEAMRLFDEMP----YKDQVAWNVMITGCLKCK------------------------ 223
Query: 257 NALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI 316
+M SA +F + +++V++ A++ GYV ++AL F ++R++G
Sbjct: 224 -----------EMDSARELFDRFTE-KDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGE 271
Query: 317 EPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF-NFDRDPFVSS----ALVDMYGKCGLF 371
P+ T SL+ ACA LE G LH +++ + +V + AL+DMY KCG
Sbjct: 272 HPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSI 331
Query: 372 DHSIQLFDEIENPNDTAWNTL-VGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKG 430
D +I++F +++ + + WNTL VG+ H G +IE F EM + PN VTF+ ++
Sbjct: 332 DRAIEVFRGVKDRDLSTWNTLIVGLALHHAEG--SIEMFEEMQRLKVWPNEVTFIGVILA 389
Query: 431 CSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAF 490
CSH+G V++G YF M +Y + P +HY C++D+LGRAG+L+E F+ SM EP A
Sbjct: 390 CSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAI 449
Query: 491 GWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIR 550
W + LGACK +G+ E K A KL+ + + SG +VLLSNIYA QW+ V+ +RKM
Sbjct: 450 VWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFD 509
Query: 551 DGNMKKLPGYSWVD 564
D +KK G S ++
Sbjct: 510 DTRVKKPTGVSLIE 523
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 98/212 (46%), Gaps = 24/212 (11%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPC-----TFLTNHLLNLYSKCGELDY 69
D + L+ CA +L GK+LH ++ + T + N L+++Y+KCG +D
Sbjct: 274 DVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDR 333
Query: 70 AIKLFDRMSKRNMVSWTAMITGFFRSLRFRE-ALDTFCQMRAEGETASQFALSSVLQACA 128
AI++F + R++ +W +I G +L E +++ F +M+ ++ V+ AC+
Sbjct: 334 AIEVFRGVKDRDLSTWNTLIVGL--ALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACS 391
Query: 129 SLGSIQFGVQVHCLVVK--------SGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPC 180
G + G + L+ +GC + DM + G++ +A E M
Sbjct: 392 HSGRVDEGRKYFSLMRDMYNIEPNIKHYGC-------MVDMLGRAGQLEEAFMFVESMKI 444
Query: 181 K-DEVLWTSMIDGYVKNGNFEKALIAYKKMVT 211
+ + ++W +++ GN E A +K+++
Sbjct: 445 EPNAIVWRTLLGACKIYGNVELGKYANEKLLS 476
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 190/617 (30%), Positives = 294/617 (47%), Gaps = 50/617 (8%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLL--NLYSKCGELDYAIKLFDRMSK 79
L++ C + KQ+ AQ++R + TF + L+ + + LD A LF +
Sbjct: 40 LLENCNSRNQF---KQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTP 96
Query: 80 R-NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ 138
N+ + MI+ S E + M + + +++A + L ++ Q
Sbjct: 97 NPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVK---Q 151
Query: 139 VHCLVVKSG-FGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNG 197
+HC ++ SG +L ++L Y + G A KVF MP D + MI GY K G
Sbjct: 152 IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQG 211
Query: 198 NFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET--FI 255
+AL Y KMV+D + D++ + S L C L GK +H I + G Y + +
Sbjct: 212 FSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLIL 271
Query: 256 GNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAF------- 308
NAL D+Y K + A F + +++ S+ +V G+V + +E A F
Sbjct: 272 SNALLDMYFKCKESGLAKRAFDAMKK-KDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRD 330
Query: 309 ---------------IDLRN-----------SGIEPNEFTFSSLIKACANQAKLEHGSLL 342
D R ++P+ T SLI AN +L HG +
Sbjct: 331 LVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV 390
Query: 343 HGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLG 402
HG V++ D F+SSAL+DMY KCG+ + + +F + W +++ A HG G
Sbjct: 391 HGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNG 450
Query: 403 RNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNC 462
+ A++ F M + G+ PN VT + +L CSH+G+VE+GL+ F M +G P EHY
Sbjct: 451 QQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGS 510
Query: 463 IIDLLGRAGKLKEVEDFIN-SMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPE 521
++DLL RAG+++E +D + MP P+ W S L AC+ D E A+LA +L+KLEPE
Sbjct: 511 LVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPE 570
Query: 522 NSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVF-GVEDWSHP 580
G +VLLSNIYA +W R+ + + +KK GYS V H F E +HP
Sbjct: 571 KEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHP 630
Query: 581 RKKEIYEKLDSLLDQIK 597
R EI L L +++K
Sbjct: 631 RWTEIKRILQHLYNEMK 647
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 104/199 (52%), Gaps = 3/199 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + LI A ELS G+ +H +IR FL++ L+++Y KCG ++ A +F
Sbjct: 367 DRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVF 426
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+++++ WT+MITG ++AL F +M+ EG T + L +VL AC+ G ++
Sbjct: 427 KTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVE 486
Query: 135 FGVQV-HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFE-EMPCK-DEVLWTSMID 191
G+ V + + K GF E +L D+ + G V +A + + +MP + + +W S++
Sbjct: 487 EGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILS 546
Query: 192 GYVKNGNFEKALIAYKKMV 210
+ E A +A +++
Sbjct: 547 ACRGGEDIETAELALTELL 565
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 177/573 (30%), Positives = 289/573 (50%), Gaps = 19/573 (3%)
Query: 3 SRNLFRFRHKLC---DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLN 59
S LFR HKL D A ++ C L GKQ+H+ +I+ G + + N L+
Sbjct: 174 SVELFREMHKLGVRHDKFGFATILSMCDYGS-LDFGKQVHSLVIKAGFFIASSVVNALIT 232
Query: 60 LYSKCGELDYAIKLFDR--MSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQ 117
+Y C + A +F+ ++ R+ V++ +I G + E+L F +M +
Sbjct: 233 MYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGL-AGFKRDESLLVFRKMLEASLRPTD 291
Query: 118 FALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEE 177
SV+ +C+ G QVH L +K+G+ + + MYS + A KVFE
Sbjct: 292 LTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFES 348
Query: 178 MPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFG 237
+ KD V W +MI Y + + A+ YK+M V D+ S L+ L
Sbjct: 349 LEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM- 407
Query: 238 KSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVE 297
+ A I+KFG + I NAL YSK+G + A +F+ S +N++S+ AI+ G+
Sbjct: 408 --VQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFER-SLRKNLISWNAIISGFYH 464
Query: 298 MDQLEKALNAFIDLRNSGIE--PNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDP 355
+ L F L S + P+ +T S+L+ C + + L GS H V++ ++
Sbjct: 465 NGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKET 524
Query: 356 FVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDR 415
+ +AL++MY +CG +S+++F+++ + +WN+L+ +++HG G NA+ T+ M D
Sbjct: 525 LIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDE 584
Query: 416 G-LKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLK 474
G + P+A TF +L CSHAG+VE+GL F SM + +GV+ +H++C++DLLGRAG L
Sbjct: 585 GKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLD 644
Query: 475 EVEDF--INSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNI 532
E E I+ W + AC HGD + K+ A LM+ E ++ +V LSNI
Sbjct: 645 EAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNI 704
Query: 533 YAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDI 565
YA W++ R+ I K G SW+ +
Sbjct: 705 YAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 143/542 (26%), Positives = 258/542 (47%), Gaps = 50/542 (9%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYS------------ 62
D +V+ I T ++ G Q+H IR G L + ++N LL+LY
Sbjct: 56 DQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKF 115
Query: 63 -------------------KCGELDYAIKLFDRMSKRNMVS-WTAMITGFFRSLRFREAL 102
K G+++YA ++FD+M +R+ V+ W AMITG S ++
Sbjct: 116 DEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSV 175
Query: 103 DTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMY 162
+ F +M G +F +++L C GS+ FG QVH LV+K+GF + + L MY
Sbjct: 176 ELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMY 234
Query: 163 SKCGEVSDACKVFEE--MPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHV 220
C V DAC VFEE + +D+V + +IDG + +++L+ ++KM+ ++
Sbjct: 235 FNCQVVVDACLVFEETDVAVRDQVTFNVVIDG-LAGFKRDESLLVFRKMLEASLRPTDLT 293
Query: 221 LCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDS 280
S + +C+ + G +H + +K G+E T + NA +YS D +A VF+S
Sbjct: 294 FVSVMGSCSCA---AMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLE 350
Query: 281 GCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGS 340
+++V++ ++ Y + + A++ + + G++P+EFTF SL+ + LE
Sbjct: 351 E-KDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE--- 406
Query: 341 LLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHG 400
++ ++KF +S+AL+ Y K G + + LF+ N +WN ++ F +G
Sbjct: 407 MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNG 466
Query: 401 LGRNAIETFNEMVDRGLK--PNAVTFVNLLKGC-SHAGMVEDGLNYFYSMDKIYGVMPRE 457
+E F+ +++ ++ P+A T LL C S + ++ + Y + +G
Sbjct: 467 FPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR--HGQFKET 524
Query: 458 EHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMK 517
N +I++ + G ++ + N M E W S + A HG+ E A + YK M+
Sbjct: 525 LIGNALINMYSQCGTIQNSLEVFNQMS-EKDVVSWNSLISAYSRHGEGENA-VNTYKTMQ 582
Query: 518 LE 519
E
Sbjct: 583 DE 584
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 199/423 (47%), Gaps = 43/423 (10%)
Query: 89 ITGFFRSLRFREALDTFCQM-RAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSG 147
+TG RS R AL F + R Q+++S + L FG QVHC ++SG
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 148 FGCELFLGSNLTDMYS-------------------------------KCGEVSDACKVFE 176
C + + L +Y K G++ A +VF+
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 177 EMPCKDEV-LWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFS 235
+MP +D+V +W +MI G ++G E ++ +++M V D+ + LS C +
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCD-YGSLD 206
Query: 236 FGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVF-QSDSGCRNIVSFTAIVDG 294
FGK +H++++K GF + + NAL +Y +V A VF ++D R+ V+F ++DG
Sbjct: 207 FGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDG 266
Query: 295 YVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRD 354
+ +++L F + + + P + TF S++ +C+ A G +HG +K +++
Sbjct: 267 LAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQVHGLAIKTGYEKY 322
Query: 355 PFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVD 414
VS+A + MY F + ++F+ +E + WNT++ + Q LG++A+ + M
Sbjct: 323 TLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHI 382
Query: 415 RGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLK 474
G+KP+ TF +LL + D L + +G+ + E N +I + G+++
Sbjct: 383 IGVKPDEFTFGSLLA----TSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIE 438
Query: 475 EVE 477
+ +
Sbjct: 439 KAD 441
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/545 (29%), Positives = 277/545 (50%), Gaps = 45/545 (8%)
Query: 10 RHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGE--- 66
+ +C S V ++ +AK L++ +Q HA +++ G TF + L+ + E
Sbjct: 31 KMSVCSSTPVP-ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKT 89
Query: 67 LDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQA 126
+ YA + +R+ N + ++I + S AL F +M +++ + VL+A
Sbjct: 90 VSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKA 149
Query: 127 CASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLW 186
CA+ + G Q+H L +KSG ++F+ + L ++Y + G A KV + MP +D V W
Sbjct: 150 CAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSW 209
Query: 187 TSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVK 246
S++ Y++ G ++A + +M NV
Sbjct: 210 NSLLSAYLEKGLVDEARALFDEMEERNV-------------------------------- 237
Query: 247 FGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALN 306
E++ N + Y+ +G + A VF S R++VS+ A+V Y + + L
Sbjct: 238 -----ESW--NFMISGYAAAGLVKEAKEVFDS-MPVRDVVSWNAMVTAYAHVGCYNEVLE 289
Query: 307 AFIDLRNSGIE-PNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMY 365
F + + E P+ FT S++ ACA+ L G +H + K + + F+++ALVDMY
Sbjct: 290 VFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMY 349
Query: 366 GKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFV 425
KCG D ++++F + + WN+++ + HGLG++A+E F+EMV G KPN +TF+
Sbjct: 350 SKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFI 409
Query: 426 NLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPF 485
+L C+H GM++ F M +Y V P EHY C++DLLGR GK++E E+ +N +P
Sbjct: 410 GVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPA 469
Query: 486 EPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCL 545
+ + S LGACK G E+A+ A +L++L +S + +SN+YA + +WE V
Sbjct: 470 DEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDG 529
Query: 546 RKMIR 550
R+ +R
Sbjct: 530 RRNMR 534
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 164/550 (29%), Positives = 274/550 (49%), Gaps = 8/550 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
+ + L+ C Q +S+G+ +H + G + + N L++ YSKC EL A LF
Sbjct: 150 SATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLF 209
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
M ++ VSW MI + +S EA+ F M + S + ++L A S +
Sbjct: 210 REMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL- 268
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
HCLVVK G ++ + ++L YS+CG + A +++ V TS++ Y
Sbjct: 269 -----HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYA 323
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+ G+ + A++ + K + ID L L C G SLH +K G +T
Sbjct: 324 EKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTL 383
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR-N 313
+ N L +YSK D+ + +F+ ++S+ +++ G V+ + A F +
Sbjct: 384 VVNGLITMYSKFDDVETVLFLFEQLQE-TPLISWNSVISGCVQSGRASTAFEVFHQMMLT 442
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
G+ P+ T +SL+ C+ L G LHG ++ NF+ + FV +AL+DMY KCG
Sbjct: 443 GGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQ 502
Query: 374 SIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSH 433
+ +F I+ P WN+++ ++ GL A+ + EM ++GLKP+ +TF+ +L C+H
Sbjct: 503 AESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNH 562
Query: 434 AGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWC 493
G V++G F +M K +G+ P +HY ++ LLGRA E I M +P + W
Sbjct: 563 GGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWG 622
Query: 494 SFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGN 553
+ L AC H + E + A K+ L+ +N G +VL+SN+YA E W+DV +R M++D
Sbjct: 623 ALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 682
Query: 554 MKKLPGYSWV 563
G S +
Sbjct: 683 YDGYLGVSQI 692
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 146/526 (27%), Positives = 240/526 (45%), Gaps = 26/526 (4%)
Query: 36 KQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRS 95
+Q+ L + G ++ LLNLY K G + A LFD M +R+ V W A+I G+ R+
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 96 LRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLG 155
+A F M +G + S L ++L C G + G VH + KSG + +
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 156 SNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVF 215
+ L YSKC E+ A +F EM K V W +MI Y ++G E+A+ +K M NV
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Query: 216 IDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNV 275
I + + LSA + + LH ++VK G + + +L YS+ G +VSA +
Sbjct: 250 ISPVTIINLLSAHVS------HEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 276 FQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAK 335
+ S +IV T+IV Y E ++ A+ F R ++ + ++ C +
Sbjct: 304 YASAKQ-DSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSH 362
Query: 336 LEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGV 395
++ G LHG +K V + L+ MY K + + LF++++ +WN+++
Sbjct: 363 IDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISG 422
Query: 396 FAQHGLGRNAIETFNE-MVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVM 454
Q G A E F++ M+ GL P+A+T +LL GCS + G +++G
Sbjct: 423 CVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLG-------KELHGYT 475
Query: 455 PR----EEHYNC--IIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERA 508
R E++ C +ID+ + G + E S+ P W S + G + RA
Sbjct: 476 LRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTATWNSMISGYSLSGLQHRA 534
Query: 509 KLAAYKLMK---LEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRD 551
L+ Y M+ L+P+ +LS E C R MI++
Sbjct: 535 -LSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKE 579
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 120/248 (48%), Gaps = 5/248 (2%)
Query: 7 FRFRHKLC---DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSK 63
F +LC D+ A+ ++ C ++ + G LH I+ G T + N L+ +YSK
Sbjct: 335 FSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSK 394
Query: 64 CGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGE-TASQFALSS 122
+++ + LF+++ + ++SW ++I+G +S R A + F QM G ++S
Sbjct: 395 FDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIAS 454
Query: 123 VLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKD 182
+L C+ L + G ++H +++ F E F+ + L DMY+KCG A VF+ +
Sbjct: 455 LLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPC 514
Query: 183 EVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGK-SLH 241
W SMI GY +G +AL Y +M + D+ LSAC GK
Sbjct: 515 TATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFR 574
Query: 242 AIIVKFGF 249
A+I +FG
Sbjct: 575 AMIKEFGI 582
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 8/266 (3%)
Query: 283 RNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACA---NQAKLEHG 339
R++ F +++ + + + F DL S + PN FT S ++A N KL+
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 340 SLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQH 399
+ + K DR +V ++L+++Y K G + LFDE+ + WN L+ ++++
Sbjct: 71 Q-VQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 400 GLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEH 459
G +A + F M+ +G P+A T VNLL C G V G + + + G+ +
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRS-VHGVAAKSGLELDSQV 188
Query: 460 YNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLE 519
N +I + +L E M + + W + +GA G +E A + +K M E
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMK-DKSTVSWNTMIGAYSQSGLQEEA-ITVFKNM-FE 245
Query: 520 PENSGAHVLLSNIYAKERQWEDVRCL 545
+ V + N+ + E + CL
Sbjct: 246 KNVEISPVTIINLLSAHVSHEPLHCL 271
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 3/222 (1%)
Query: 13 LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIK 72
L D+ +A L+ C+Q L+ GK+LH +R F+ L+++Y+KCG A
Sbjct: 446 LPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAES 505
Query: 73 LFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGS 132
+F + +W +MI+G+ S AL + +MR +G + VL AC G
Sbjct: 506 VFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGF 565
Query: 133 IQFG-VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMI 190
+ G + ++ + G L + + + + ++A + +M K D +W +++
Sbjct: 566 VDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALL 625
Query: 191 DGYVKNGNFEKA-LIAYKKMVTDNVFIDQHVLCSTLSACTAL 231
+ + E +A K + D +VL S L A A+
Sbjct: 626 SACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAM 667
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 158/537 (29%), Positives = 290/537 (54%), Gaps = 27/537 (5%)
Query: 67 LDYAIKLFDRMSKRN--MVSWTAMITGFFRSLRFREALDTFCQMRAEGETAS-QFALSSV 123
+ YA KLFD+ +R+ +S +MI + + ++ ++ + +R E A F +++
Sbjct: 26 IGYARKLFDQRPQRDDSFLS-NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTL 84
Query: 124 LQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDE 183
++C+ + G+Q+H + + GF ++++ + + DMY+K G++ A F+EMP + E
Sbjct: 85 TKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSE 144
Query: 184 VLWTSMIDGYVKNGNFEKALIAYKKM------VTDNVFIDQHVLCSTLSACTALKAFSFG 237
V WT++I GY++ G + A + +M V N +D V +++ L F
Sbjct: 145 VSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRL----FD 200
Query: 238 KSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVE 297
+ H ++ + + Y D+ +A +F + RN+VS+ ++ GY +
Sbjct: 201 EMTHKTVITW---------TTMIHGYCNIKDIDAARKLFDAMPE-RNLVSWNTMIGGYCQ 250
Query: 298 MDQLEKALNAFIDLR-NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPF 356
Q ++ + F +++ + ++P++ T S++ A ++ L G H V + D+
Sbjct: 251 NKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVK 310
Query: 357 VSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRG 416
V +A++DMY KCG + + ++FDE+ +WN ++ +A +G R A++ F M+
Sbjct: 311 VCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE 370
Query: 417 LKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEV 476
KP+ +T + ++ C+H G+VE+G +F+ M ++ G+ + EHY C++DLLGRAG LKE
Sbjct: 371 -KPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEA 428
Query: 477 EDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKE 536
ED I +MPFEP SFL AC + D ERA+ K ++LEP+N G +VLL N+YA +
Sbjct: 429 EDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAAD 488
Query: 537 RQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLL 593
++W+D ++ ++R KK G S ++I F D +HP ++ I+ L LL
Sbjct: 489 KRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLL 545
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 181/402 (45%), Gaps = 19/402 (4%)
Query: 6 LFR-FRHKLC---DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLY 61
L+R R + C D+ L ++C+ + + +G QLH+Q+ R G +++ ++++Y
Sbjct: 64 LYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMY 123
Query: 62 SKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALS 121
+K G++ A FD M R+ VSWTA+I+G+ R A F QM + A+
Sbjct: 124 AKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMM 183
Query: 122 SVLQACASLGSIQ--FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP 179
+ S + F H V+ + + Y ++ A K+F+ MP
Sbjct: 184 DGFVKSGDMTSARRLFDEMTHKTVIT---------WTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 180 CKDEVLWTSMIDGYVKNGNFEKALIAYKKM-VTDNVFIDQHVLCSTLSACTALKAFSFGK 238
++ V W +MI GY +N ++ + +++M T ++ D + S L A + A S G+
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 239 SLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEM 298
H + + + + + A+ D+YSK G++ A +F + + + S+ A++ GY
Sbjct: 295 WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIF-DEMPEKQVASWNAMIHGYALN 353
Query: 299 DQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS 358
AL+ F+ + +P+E T ++I AC + +E G + + +
Sbjct: 354 GNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHY 412
Query: 359 SALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQH 399
+VD+ G+ G + L + PN ++ + Q+
Sbjct: 413 GCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQY 454
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 156/547 (28%), Positives = 288/547 (52%), Gaps = 14/547 (2%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM 82
+++C E+S+ +H +++ G F + LL +S ++ YA +F+ +S N+
Sbjct: 35 LRSCRDTVEVSR---IHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNL 90
Query: 83 VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCL 142
+ MI G+ S A F Q+RA+G T +F+ + L++C+ + G +H +
Sbjct: 91 FMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGI 150
Query: 143 VVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP-CKDEVLWTSMIDGYVKNGNFEK 201
++SGF L + L Y CG++SDA KVF+EMP D V ++++++GY++
Sbjct: 151 ALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKAL 210
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
AL ++ M V ++ L S LSA + L S +S H + +K G + + + AL
Sbjct: 211 ALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIG 270
Query: 262 LYSKSGDMVSASNVFQSDSGCR-NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNE 320
+Y K+G + SA +F D R ++V++ ++D Y + LE+ + ++ ++PN
Sbjct: 271 MYGKTGGISSARRIF--DCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNS 328
Query: 321 FTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDE 380
TF L+ +CA G + + + D + +ALVDMY K GL + ++++F+
Sbjct: 329 STFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNR 388
Query: 381 IENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRG--LKPNAVTFVNLLKGCSHAGMVE 438
+++ + +W ++ + HGL R A+ FN+M + ++PN +TF+ +L CSH G+V
Sbjct: 389 MKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVM 448
Query: 439 DGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGA 498
+G+ F M + Y P+ EHY C++DLLGRAG+L+E + I ++P + W + L A
Sbjct: 449 EGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAA 508
Query: 499 CKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLP 558
C+ +G+ + + +L ++ + +LL+ +A E + L + G +K
Sbjct: 509 CRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPE--KSLDNELNKG--RKEA 564
Query: 559 GYSWVDI 565
GYS ++I
Sbjct: 565 GYSAIEI 571
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 227/389 (58%), Gaps = 3/389 (0%)
Query: 212 DNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVS 271
D D + L S + +C + F G H + +K GF + ++G++L LY SG++ +
Sbjct: 114 DGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVEN 173
Query: 272 ASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACA 331
A VF+ + RN+VS+TA++ G+ + +++ L + +R S +PN++TF++L+ AC
Sbjct: 174 AYKVFE-EMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACT 232
Query: 332 NQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNT 391
L G +H Q + +S++L+ MY KCG + ++FD+ N + +WN+
Sbjct: 233 GSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNS 292
Query: 392 LVGVFAQHGLGRNAIETFNEMVDR-GLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKI 450
++ +AQHGL AIE F M+ + G KP+A+T++ +L C HAG+V++G +F M +
Sbjct: 293 MIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE- 351
Query: 451 YGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKL 510
+G+ P HY+C++DLLGR G L+E + I +MP +P + W S L +C+ HGD
Sbjct: 352 HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIR 411
Query: 511 AAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETH 570
AA + + LEP+ + HV L+N+YA W++ +RK+++D +K PG SW++I N
Sbjct: 412 AAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVF 471
Query: 571 VFGVEDWSHPRKKEIYEKLDSLLDQIKIV 599
+F ED S+ R EI L L+D ++ +
Sbjct: 472 MFKAEDGSNCRMLEIVHVLHCLIDHMEFL 500
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 163/328 (49%), Gaps = 6/328 (1%)
Query: 103 DTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMY 162
D+ ++ +G + + LSS +++C + G HCL +K GF +++LGS+L +Y
Sbjct: 106 DSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLY 165
Query: 163 SKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLC 222
GEV +A KVFEEMP ++ V WT+MI G+ + + L Y KM + +
Sbjct: 166 RDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFT 225
Query: 223 STLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGC 282
+ LSACT A G+S+H + G + I N+L +Y K GD+ A +F S
Sbjct: 226 ALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN- 284
Query: 283 RNIVSFTAIVDGYVEMDQLEKALNAF-IDLRNSGIEPNEFTFSSLIKACANQAKLEHGSL 341
+++VS+ +++ GY + +A+ F + + SG +P+ T+ ++ +C + ++ G
Sbjct: 285 KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRK 344
Query: 342 LHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHG 400
+ + + S LVD+ G+ GL +++L + + PN W +L+ HG
Sbjct: 345 FFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
Query: 401 LGRNAIETFNEMVDRGLKPN-AVTFVNL 427
I E + L+P+ A T V L
Sbjct: 405 DVWTGIRAAEERL--MLEPDCAATHVQL 430
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 135/265 (50%), Gaps = 1/265 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ ++ +++C ++ G H ++GG + +L + L+ LY GE++ A K+F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ M +RN+VSWTAMI+GF + R L + +MR + + +++L AC G++
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G VHC + G L + ++L MY KCG++ DA ++F++ KD V W SMI GY
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 195 KNGNFEKALIAYKKMVTDN-VFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
++G +A+ ++ M+ + D LS+C G+ ++ + G + E
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPEL 358
Query: 254 FIGNALTDLYSKSGDMVSASNVFQS 278
+ L DL + G + A + ++
Sbjct: 359 NHYSCLVDLLGRFGLLQEALELIEN 383
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 89/215 (41%), Gaps = 6/215 (2%)
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGL 370
++ G + + SS +++C GS H +K F D ++ S+LV +Y G
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 371 FDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKG 430
+++ ++F+E+ N +W ++ FAQ ++ +++M PN TF LL
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSA 230
Query: 431 CSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAF 490
C+ +G + G + + G+ N +I + + G LK+ +
Sbjct: 231 CTGSGALGQGRS-VHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKDVV 288
Query: 491 GWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGA 525
W S + HG + A +L +L SG
Sbjct: 289 SWNSMIAGYAQHG----LAMQAIELFELMMPKSGT 319
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 255/467 (54%), Gaps = 21/467 (4%)
Query: 100 EALDTFCQMRAEGETASQFALS--------SVLQACASLGSIQFGVQVHCLVVKSGFGCE 151
EALD+ + ET++Q +S S+L+ C SL +I GV+VH L+
Sbjct: 70 EALDSVI---TDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNN 126
Query: 152 LFLGSNLTDMYSKCGEVSDACKVFEEMPCKDE--VLWTSMIDGYVKNGNFEKALIAYKKM 209
L + S L +Y+ CG A +VF+ M +D W S+I GY + G +E A+ Y +M
Sbjct: 127 LGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQM 186
Query: 210 VTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDM 269
D V D+ L AC + + G+++H +VK GF Y+ ++ NAL +Y+K GD+
Sbjct: 187 AEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDI 246
Query: 270 VSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKA 329
V A NVF ++ VS+ +++ GY+ L +AL+ F + +GIEP++ SS++
Sbjct: 247 VKARNVFDMIPH-KDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL-- 303
Query: 330 CANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAW 389
A +HG LHG V++ + + V++AL+ +Y K G + +FD++ + +W
Sbjct: 304 -ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSW 362
Query: 390 NTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDK 449
N ++ + H N ++ F +M KP+ +TFV++L C++ GMVEDG F M K
Sbjct: 363 NAII---SAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSK 419
Query: 450 IYGVMPREEHYNCIIDLLGRAGKLKEVEDFI-NSMPFEPTAFGWCSFLGACKTHGDKERA 508
YG+ P+ EHY C+++L GRAG ++E I M E W + L AC HG+ +
Sbjct: 420 EYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIG 479
Query: 509 KLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMK 555
++AA +L +LEP+N LL IY+K ++ EDV +R+M+ D ++
Sbjct: 480 EVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 192 bits (489), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 223/443 (50%), Gaps = 35/443 (7%)
Query: 13 LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHL------LNLYSKCGE 66
L + + A L++TC + + G ++H +P L N+L + LY+ CG
Sbjct: 89 LTEPEIFASLLETCYSLRAIDHGVRVHH------LIPPYLLRNNLGISSKLVRLYASCGY 142
Query: 67 LDYAIKLFDRMSKRNM--VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVL 124
+ A ++FDRMSKR+ +W ++I+G+ ++ +A+ + QM +G +F VL
Sbjct: 143 AEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVL 202
Query: 125 QACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEV 184
+AC +GS+Q G +H +VK GFG ++++ + L MY+KCG++ A VF+ +P KD V
Sbjct: 203 KACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYV 262
Query: 185 LWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAII 244
W SM+ GY+ +G +AL ++ MV + + D+ + S L+ +F G+ LH +
Sbjct: 263 SWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVL---SFKHGRQLHGWV 319
Query: 245 VKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKA 304
++ G E+E + NAL LYSK G + A +F R+ VS+ AI+ + +
Sbjct: 320 IRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLE-RDTVSWNAIISAH---SKNSNG 375
Query: 305 LNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALV 362
L F + + +P+ TF S++ CAN +E G L + K + DP + + +V
Sbjct: 376 LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSK-EYGIDPKMEHYACMV 434
Query: 363 DMYGKCGLFDHSIQLFDEIE--NPNDTAWNTLVGVFAQHG---LGRNAIETFNEMVDRGL 417
++YG+ G+ + + + + T W L+ HG +G A + E L
Sbjct: 435 NLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFE-----L 489
Query: 418 KP-NAVTFVNLLKGCSHAGMVED 439
+P N F L++ S A ED
Sbjct: 490 EPDNEHNFELLIRIYSKAKRAED 512
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 263 bits (671), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 147/457 (32%), Positives = 253/457 (55%), Gaps = 24/457 (5%)
Query: 122 SVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK 181
+++ C SL +++ Q+H ++ G + S L + S +S A + ++P
Sbjct: 14 NLISKCKSLQNLK---QIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNP 69
Query: 182 DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQH--VLCSTLSACTALKAFSF--- 236
L+ ++I V N N + +A+ + D + + V + + + KA F
Sbjct: 70 SVFLYNTLISSIVSNHNSTQTHLAFS--LYDQILSSRSNFVRPNEFTYPSLFKASGFDAQ 127
Query: 237 ----GKSLHAIIVKF--GFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTA 290
G++LHA ++KF ++ F+ AL Y+ G + A ++F+ ++ ++
Sbjct: 128 WHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIRE-PDLATWNT 186
Query: 291 IVDGYV---EMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVV 347
++ Y E+D E+ L F+ ++ + PNE + +LIK+CAN + G H V+
Sbjct: 187 LLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVL 243
Query: 348 KFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIE 407
K N + FV ++L+D+Y KCG + ++FDE+ + + +N ++ A HG G+ IE
Sbjct: 244 KNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIE 303
Query: 408 TFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLL 467
+ ++ +GL P++ TFV + CSH+G+V++GL F SM +YG+ P+ EHY C++DLL
Sbjct: 304 LYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLL 363
Query: 468 GRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHV 527
GR+G+L+E E+ I MP +P A W SFLG+ +THGD ER ++A L+ LE ENSG +V
Sbjct: 364 GRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYV 423
Query: 528 LLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVD 564
LLSNIYA +W DV R++++D + K PG S ++
Sbjct: 424 LLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTLN 460
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 125/245 (51%), Gaps = 11/245 (4%)
Query: 35 GKQLHAQLIRGGCLPCT---FLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITG 91
G+ LHA +++ P F+ L+ Y+ CG+L A LF+R+ + ++ +W ++
Sbjct: 132 GRALHAHVLKF-LEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAA 190
Query: 92 FFRSLRF---REALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGF 148
+ S E L F +M+ ++ +L +++++CA+LG GV H V+K+
Sbjct: 191 YANSEEIDSDEEVLLLFMRMQVR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNL 247
Query: 149 GCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKK 208
F+G++L D+YSKCG +S A KVF+EM +D + +MI G +G ++ + YK
Sbjct: 248 TLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKS 307
Query: 209 MVTDNVFIDQHVLCSTLSACTALKAFSFG-KSLHAIIVKFGFEYETFIGNALTDLYSKSG 267
+++ + D T+SAC+ G + +++ +G E + L DL +SG
Sbjct: 308 LISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSG 367
Query: 268 DMVSA 272
+ A
Sbjct: 368 RLEEA 372
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 172/394 (43%), Gaps = 24/394 (6%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
LI C K L KQ+HAQ+I G T+ + LL+L S L YA+ + ++ +
Sbjct: 15 LISKC---KSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNPS 70
Query: 82 MVSWTAMITGFF---RSLRFREALDTFCQM---RAEGETASQFALSSVLQAC---ASLGS 132
+ + +I+ S + A + Q+ R+ ++F S+ +A A
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHR 130
Query: 133 IQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDG 192
+ H L + F+ + L Y+ CG++ +A +FE + D W +++
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAA 190
Query: 193 YVKNGNF---EKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF 249
Y + E+ L+ + +M V ++ L + + +C L F G H ++K
Sbjct: 191 YANSEEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNL 247
Query: 250 EYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFI 309
F+G +L DLYSK G + A VF S R++ + A++ G ++ + +
Sbjct: 248 TLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQ-RDVSCYNAMIRGLAVHGFGQEGIELYK 306
Query: 310 DLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGK 367
L + G+ P+ TF I AC++ ++ G + +K + +P V LVD+ G+
Sbjct: 307 SLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNS-MKAVYGIEPKVEHYGCLVDLLGR 365
Query: 368 CGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHG 400
G + + + ++ PN T W + +G HG
Sbjct: 366 SGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHG 399
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 100/196 (51%), Gaps = 4/196 (2%)
Query: 18 AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM 77
++ LI++CA E +G H +++ F+ L++LYSKCG L +A K+FD M
Sbjct: 218 SLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEM 277
Query: 78 SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
S+R++ + AMI G +E ++ + + ++G + AC+ G + G+
Sbjct: 278 SQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGL 337
Query: 138 QVHCLVVKSGFGCELFLGSN--LTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMIDGYV 194
Q+ +K+ +G E + L D+ + G + +A + ++MP K + LW S +
Sbjct: 338 QIFN-SMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQ 396
Query: 195 KNGNFEKALIAYKKMV 210
+G+FE+ IA K ++
Sbjct: 397 THGDFERGEIALKHLL 412
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 262 bits (669), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 184/678 (27%), Positives = 304/678 (44%), Gaps = 114/678 (16%)
Query: 32 LSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITG 91
L G H + I+ G +N L+NLYSK G L A +FD M +RN+ SW A+I
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAA 63
Query: 92 FFRSLRFREALDTF------------------------CQMRAE---GETASQ------- 117
+ + +EA + F C+ A GE +
Sbjct: 64 YVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWI 123
Query: 118 --FALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVF 175
F ++++++ A L ++ +G Q+H ++VK+G F S+L MYSKCG+ + C +F
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF 183
Query: 176 ----------------------------------EEMPCKDEVLWTSMIDGYVKNGNFEK 201
D + W ++I GY +NG E+
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEE 243
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
AL M + + D+H + L+ ++LK+ GK +HA ++K G F+ + + D
Sbjct: 244 ALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVD 303
Query: 262 LY-------------------------------SKSGDMVSASNVFQSDSGCRNIVSFTA 290
+Y S G MV A +F S S +N+V +TA
Sbjct: 304 VYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSE-KNLVVWTA 362
Query: 291 IVDGYVEMDQLEKALN---AFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVV 347
+ GY+ + Q + L AFI N P+ S++ AC+ QA +E G +HG +
Sbjct: 363 MFLGYLNLRQPDSVLELARAFI--ANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSL 420
Query: 348 KFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIE 407
+ D + +A VDMY KCG +++ ++FD + +N ++ A HG + +
Sbjct: 421 RTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQ 480
Query: 408 TFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLL 467
F +M + G KP+ +TF+ LL C H G+V +G YF SM + Y + P HY C+IDL
Sbjct: 481 HFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLY 540
Query: 468 GRAGKLKEVEDFINSM-PFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAH 526
G+A +L + + + + E A +FL AC + + E K KL+ +E N +
Sbjct: 541 GKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRY 600
Query: 527 VLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIY 586
+ ++N YA +W++++ +R +R ++ G SW +I + H+F D SH + IY
Sbjct: 601 IQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIY 660
Query: 587 EKLD------SLLDQIKI 598
L S +D+I I
Sbjct: 661 AMLHFVTKDLSEIDEIMI 678
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 39/288 (13%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYA---- 70
D + ++ + K L GK++HA++++ G F+++ ++++Y KCG + YA
Sbjct: 259 DEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAH 318
Query: 71 ---------------------------IKLFDRMSKRNMVSWTAMITGFFRSLRFREALD 103
+LFD +S++N+V WTAM G+ L R+
Sbjct: 319 LLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGY---LNLRQPDS 375
Query: 104 TFCQMRA----EGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLT 159
RA E T + SVL AC+ ++ G ++H +++G + L +
Sbjct: 376 VLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFV 435
Query: 160 DMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQH 219
DMYSKCG V A ++F+ +D V++ +MI G +G+ K+ ++ M D+
Sbjct: 436 DMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEI 495
Query: 220 VLCSTLSACTALKAFSFG-KSLHAIIVKFGFEYETFIGNALTDLYSKS 266
+ LSAC G K ++I + ET + DLY K+
Sbjct: 496 TFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKA 543
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 85/189 (44%), Gaps = 3/189 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS + ++ C+ + GK++H +R G L L +++YSKCG ++YA ++F
Sbjct: 392 DSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIF 451
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
D +R+ V + AMI G ++ F M G + ++L AC G +
Sbjct: 452 DSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVL 511
Query: 135 FGVQVHCLVVKS-GFGCELFLGSNLTDMYSKCGEVSDACKVFE--EMPCKDEVLWTSMID 191
G + ++++ E + + D+Y K + A ++ E + KD V+ + ++
Sbjct: 512 EGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLN 571
Query: 192 GYVKNGNFE 200
N N E
Sbjct: 572 ACSWNKNTE 580
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 216/379 (56%), Gaps = 1/379 (0%)
Query: 225 LSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRN 284
L C K ++ GK +HA + GF ++ L LY+ SGD+ +A +F+S R+
Sbjct: 115 LQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLK-IRD 173
Query: 285 IVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHG 344
++ + A++ GYV+ ++ L + D+R + I P+++TF+S+ +AC+ +LEHG H
Sbjct: 174 LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHA 233
Query: 345 QVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRN 404
++K + V SALVDMY KC F ++FD++ N W +L+ + HG
Sbjct: 234 VMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSE 293
Query: 405 AIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCII 464
++ F +M + G +PN VTF+ +L C+H G+V+ G +FYSM + YG+ P +HY ++
Sbjct: 294 VLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMV 353
Query: 465 DLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSG 524
D LGRAG+L+E +F+ P + W S LGAC+ HG+ + +LAA K ++L+P N G
Sbjct: 354 DTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGG 413
Query: 525 AHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKE 584
+V+ +N YA E +R+ + + +KK PGYS +++ E H F +D SH ++
Sbjct: 414 NYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEK 473
Query: 585 IYEKLDSLLDQIKIVGYVP 603
IY+K+ + + Y P
Sbjct: 474 IYKKVHEMTSFFMDIDYYP 492
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 135/270 (50%), Gaps = 2/270 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
+ + A L+Q C Q KE +KGK++HAQ+ G +L LL LY+ G+L A LF
Sbjct: 107 EPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILF 166
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ R+++ W AMI+G+ + +E L + MR Q+ +SV +AC++L ++
Sbjct: 167 RSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLE 226
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G + H +++K + + S L DMY KC SD +VF+++ ++ + WTS+I GY
Sbjct: 227 HGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYG 286
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFG-KSLHAIIVKFGFEYET 253
+G + L ++KM + + L+AC G + +++ +G E E
Sbjct: 287 YHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEG 346
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCR 283
A+ D ++G + A F S C+
Sbjct: 347 QHYAAMVDTLGRAGRLQEAYE-FVMKSPCK 375
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 61/130 (46%)
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGL 370
L +SG++ T++ L++ C + + G +H Q+ F + ++ L+ +Y G
Sbjct: 99 LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGD 158
Query: 371 FDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKG 430
+ LF ++ + WN ++ + Q GL + + + +M + P+ TF ++ +
Sbjct: 159 LQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRA 218
Query: 431 CSHAGMVEDG 440
CS +E G
Sbjct: 219 CSALDRLEHG 228
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/495 (30%), Positives = 241/495 (48%), Gaps = 35/495 (7%)
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV--- 194
Q HC ++ +G + + + S G + A VF PC + L +MI
Sbjct: 33 QSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLD 92
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+ A+ Y+K+ D L + FG+ +H +V FGF+
Sbjct: 93 EPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVH 152
Query: 255 I-------------------------------GNALTDLYSKSGDMVSASNVFQS-DSGC 282
+ NAL Y K G+M A ++ +
Sbjct: 153 VVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWV 212
Query: 283 RNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLL 342
RN VS+T ++ GY + + +A+ F + +EP+E T +++ ACA+ LE G +
Sbjct: 213 RNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI 272
Query: 343 HGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLG 402
V +R +++A++DMY K G ++ +F+ + N W T++ A HG G
Sbjct: 273 CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHG 332
Query: 403 RNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNC 462
A+ FN MV G++PN VTF+ +L CSH G V+ G F SM YG+ P EHY C
Sbjct: 333 AEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGC 392
Query: 463 IIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPEN 522
+IDLLGRAGKL+E ++ I SMPF+ A W S L A H D E + A +L+KLEP N
Sbjct: 393 MIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNN 452
Query: 523 SGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRK 582
SG ++LL+N+Y+ +W++ R +R M++ +KK+ G S +++ N + F D +HP+
Sbjct: 453 SGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQV 512
Query: 583 KEIYEKLDSLLDQIK 597
+ I+E L + QI+
Sbjct: 513 ERIHEILQEMDLQIQ 527
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 187/430 (43%), Gaps = 55/430 (12%)
Query: 36 KQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRS 95
KQ H +I G + S G L YA +F N MI R+
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMI----RA 87
Query: 96 LRFRE-------ALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGF 148
L + A+ + ++ A F VL+ + + FG Q+H VV GF
Sbjct: 88 LSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGF 147
Query: 149 GCELFLGSNLTDMYSKCGEVSDACKVFEE------------------------------- 177
+ + + L MY CG + DA K+F+E
Sbjct: 148 DSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEM 207
Query: 178 MPC--KDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFS 235
MPC ++EV WT +I GY K+G +A+ +++M+ +NV D+ L + LSAC L +
Sbjct: 208 MPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLE 267
Query: 236 FGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGY 295
G+ + + + G + NA+ D+Y+KSG++ A +VF+ + RN+V++T I+ G
Sbjct: 268 LGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNE-RNVVTWTTIIAGL 326
Query: 296 VEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGS-LLHGQVVKFNFDRD 354
+AL F + +G+ PN+ TF +++ AC++ ++ G L + K+ +
Sbjct: 327 ATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPN 386
Query: 355 PFVSSALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHG---LGRNAIETFN 410
++D+ G+ G + ++ + N W +L+ H LG A+ +
Sbjct: 387 IEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERAL---S 443
Query: 411 EMVDRGLKPN 420
E++ L+PN
Sbjct: 444 ELIK--LEPN 451
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 123/315 (39%), Gaps = 40/315 (12%)
Query: 238 KSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVE 297
K H ++ G + + S +G + A +VF + C N ++
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVF-THQPCPNTYLHNTMIRALSL 90
Query: 298 MDQLEK---ALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRD 354
+D+ A+ + L +P+ FTF ++K + + G +HGQVV F FD
Sbjct: 91 LDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSS 150
Query: 355 PFVSSALVDMYGKCGLFDHSIQLFDE-------IENP----------------------- 384
V + L+ MY CG + ++FDE + N
Sbjct: 151 VHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPC 210
Query: 385 ---NDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGL 441
N+ +W ++ +A+ G AIE F M+ ++P+ VT + +L C+ G +E G
Sbjct: 211 WVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGE 270
Query: 442 NYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKT 501
+D G+ N +ID+ ++G + + D + E W + + T
Sbjct: 271 RICSYVDH-RGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN-ERNVVTWTTIIAGLAT 328
Query: 502 HGDKERAKLAAYKLM 516
HG A LA + M
Sbjct: 329 HGHGAEA-LAMFNRM 342
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + ++ CA L G+++ + + G L N ++++Y+K G + A+ +F
Sbjct: 249 DEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVF 308
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ +++RN+V+WT +I G EAL F +M G + ++L AC+ +G +
Sbjct: 309 ECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVD 368
Query: 135 FGVQV-HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMI 190
G ++ + + K G + + D+ + G++ +A +V + MP K + +W S++
Sbjct: 369 LGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLL 426
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 127/392 (32%), Positives = 219/392 (55%), Gaps = 5/392 (1%)
Query: 173 KVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALK 232
++ ++ P LW +++ Y+++ + A+ Y MV V D++ L + A +
Sbjct: 74 RILDQYPIA--FLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIH 131
Query: 233 AFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIV 292
F+ GK LH++ V+ GF + F + LY K+G+ +A VF + R + S+ AI+
Sbjct: 132 DFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPE-RKLGSWNAII 190
Query: 293 DGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFD 352
G + +A+ F+D++ SG+EP++FT S+ +C L LH V++ +
Sbjct: 191 GGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTE 250
Query: 353 R--DPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFN 410
D + ++L+DMYGKCG D + +F+E+ N +W++++ +A +G A+E F
Sbjct: 251 EKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFR 310
Query: 411 EMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRA 470
+M + G++PN +TFV +L C H G+VE+G YF M + + P HY CI+DLL R
Sbjct: 311 QMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRD 370
Query: 471 GKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLS 530
G+LKE + + MP +P W +G C+ GD E A+ A +++LEP N G +V+L+
Sbjct: 371 GQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLA 430
Query: 531 NIYAKERQWEDVRCLRKMIRDGNMKKLPGYSW 562
N+YA W+DV +RK+++ + K+P YS+
Sbjct: 431 NVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 147/296 (49%), Gaps = 5/296 (1%)
Query: 13 LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIK 72
L D ++ +I+ Q + + GK+LH+ +R G + F + + LY K GE + A K
Sbjct: 114 LPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARK 173
Query: 73 LFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGS 132
+FD +R + SW A+I G + R EA++ F M+ G F + SV +C LG
Sbjct: 174 VFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGD 233
Query: 133 IQFGVQVH--CLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMI 190
+ Q+H L K+ ++ + ++L DMY KCG + A +FEEM ++ V W+SMI
Sbjct: 234 LSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMI 293
Query: 191 DGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFE 250
GY NGN +AL +++M V ++ LSAC GK+ A++ K FE
Sbjct: 294 VGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMM-KSEFE 352
Query: 251 YETFIGN--ALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKA 304
E + + + DL S+ G + A V + N++ + ++ G + +E A
Sbjct: 353 LEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 151/315 (47%), Gaps = 7/315 (2%)
Query: 85 WTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVV 144
W ++ + R +A+ + M +++L V++A + G ++H + V
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 145 KSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALI 204
+ GF + F S +Y K GE +A KVF+E P + W ++I G G +A+
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 205 AYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIG--NALTDL 262
+ M + D + S ++C L S LH +++ E ++ I N+L D+
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 263 YSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFT 322
Y K G M AS++F+ + RN+VS+++++ GY +AL F +R G+ PN+ T
Sbjct: 265 YGKCGRMDLASHIFE-EMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKIT 323
Query: 323 FSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFDHSIQLFDE 380
F ++ AC + +E G + ++K F+ +P +S +VD+ + G + ++ +E
Sbjct: 324 FVGVLSACVHGGLVEEGK-TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEE 382
Query: 381 IE-NPNDTAWNTLVG 394
+ PN W L+G
Sbjct: 383 MPMKPNVMVWGCLMG 397
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 159/589 (26%), Positives = 293/589 (49%), Gaps = 42/589 (7%)
Query: 20 AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK 79
A L+ TC E G+QLHA I G + L L+ YS LD A + +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEI 146
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQV 139
+ + W +I + R+ RF+E++ + +M ++G A +F SV++ACA+L +G V
Sbjct: 147 LHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVV 206
Query: 140 HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY------ 193
H + S C L++ + L MY + G+V A ++F+ M +D V W ++I+ Y
Sbjct: 207 HGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKL 266
Query: 194 -----------------------------VKNGNFEKALIAYKKMVTDNVFIDQHVLCST 224
++ GN+ AL M NV I + +
Sbjct: 267 GEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 225 LSACTALKAFSFGKSLHAIIVK---FGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSG 281
L AC+ + A +GK H ++++ F + + + N+L +YS+ D+ A VFQ
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEA 385
Query: 282 CRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSL 341
++ ++ +I+ G+ ++ E+ ++ SG PN T +S++ A L+HG
Sbjct: 386 -NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 342 LHGQVVKFNFDRDPFVS-SALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHG 400
H +++ +D + ++LVDMY K G + ++FD + + + +L+ + + G
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLG 504
Query: 401 LGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHY 460
G A+ F +M G+KP+ VT V +L CSH+ +V +G F M+ ++G+ R EHY
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY 564
Query: 461 NCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYK-LMKLE 519
+C++DL RAG L + D +++P+EP++ + L AC HG+ + AA K L++ +
Sbjct: 565 SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETK 624
Query: 520 PENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNE 568
PE+ G ++LL+++YA W + ++ ++ D ++K ++ ++ +E
Sbjct: 625 PEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSE 673
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 187/431 (43%), Gaps = 56/431 (12%)
Query: 100 EALDTFCQMRAEGETASQFAL---SSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGS 156
EA TF +R + + +F L +S+L C G Q+H + SG + L
Sbjct: 64 EAFRTFSLLRYQS-GSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVP 122
Query: 157 NLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFI 216
L YS + +A + E + W +I Y++N F++++ YK+M++ +
Sbjct: 123 KLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRA 182
Query: 217 DQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVF 276
D+ S + AC AL F++G+ +H I ++ NAL +Y + G + A +F
Sbjct: 183 DEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLF 242
Query: 277 QSDSGCRNIVSFTAIVDGYVEMDQLEK--------------------------------- 303
S R+ VS+ AI++ Y ++L +
Sbjct: 243 DRMSE-RDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNY 301
Query: 304 --ALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVK---FNFDRDPFVS 358
ALN + +RN + + +KAC++ L+ G + H V++ F+ D D V
Sbjct: 302 IGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN-VR 360
Query: 359 SALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLK 418
++L+ MY +C H+ +F ++E + + WN+++ FA + EM+ G
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 419 PNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCII------DLLGRAGK 472
PN +T ++L + G ++ G + ++ R+ + +C+I D+ ++G+
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCY------ILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 473 LKEVEDFINSM 483
+ + +SM
Sbjct: 475 IIAAKRVFDSM 485
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 140/275 (50%), Gaps = 20/275 (7%)
Query: 16 SKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTF------LTNHLLNLYSKCGELDY 69
S A+ ++ C+ L GK H +IR C+F + N L+ +YS+C +L +
Sbjct: 320 SVAMINGLKACSHIGALKWGKVFHCLVIRS----CSFSHDIDNVRNSLITMYSRCSDLRH 375
Query: 70 AIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACAS 129
A +F ++ ++ +W ++I+GF + R E +M G + L+S+L A
Sbjct: 376 AFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFAR 435
Query: 130 LGSIQFGVQVHCLVVK-SGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTS 188
+G++Q G + HC +++ + L L ++L DMY+K GE+ A +VF+ M +D+V +TS
Sbjct: 436 VGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTS 495
Query: 189 MIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKA-----FSFGKSLHAI 243
+IDGY + G E AL +K M + D + + LSAC+ + F K H
Sbjct: 496 LIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVF 555
Query: 244 IVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS 278
++ E+ + + DLY ++G + A ++F +
Sbjct: 556 GIRLRLEHYS----CMVDLYCRAGYLDKARDIFHT 586
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 90/216 (41%), Gaps = 21/216 (9%)
Query: 300 QLEKALNAFIDLR-NSGIEPNEFTF---SSLIKACANQAKLEHGSLLHGQVVKFNFDRDP 355
QL +A F LR SG +EF +SL+ C + G LH + + D
Sbjct: 61 QLYEAFRTFSLLRYQSG--SHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDS 118
Query: 356 FVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDR 415
+ LV Y L D + + + E + WN L+G + ++ + ++ + M+ +
Sbjct: 119 VLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSK 178
Query: 416 GLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHY------NCIIDLLGR 469
G++ + T+ +++K C+ L++ Y ++G + H N +I + R
Sbjct: 179 GIRADEFTYPSVIKACAAL------LDFAYG-RVVHGSIEVSSHRCNLYVCNALISMYKR 231
Query: 470 AGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDK 505
GK+ + M E A W + + C T +K
Sbjct: 232 FGKVDVARRLFDRMS-ERDAVSWNAIIN-CYTSEEK 265
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 159/589 (26%), Positives = 293/589 (49%), Gaps = 42/589 (7%)
Query: 20 AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK 79
A L+ TC E G+QLHA I G + L L+ YS LD A + +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEI 146
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQV 139
+ + W +I + R+ RF+E++ + +M ++G A +F SV++ACA+L +G V
Sbjct: 147 LHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVV 206
Query: 140 HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY------ 193
H + S C L++ + L MY + G+V A ++F+ M +D V W ++I+ Y
Sbjct: 207 HGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKL 266
Query: 194 -----------------------------VKNGNFEKALIAYKKMVTDNVFIDQHVLCST 224
++ GN+ AL M NV I + +
Sbjct: 267 GEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 225 LSACTALKAFSFGKSLHAIIVK---FGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSG 281
L AC+ + A +GK H ++++ F + + + N+L +YS+ D+ A VFQ
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEA 385
Query: 282 CRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSL 341
++ ++ +I+ G+ ++ E+ ++ SG PN T +S++ A L+HG
Sbjct: 386 -NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 342 LHGQVVKFNFDRDPFVS-SALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHG 400
H +++ +D + ++LVDMY K G + ++FD + + + +L+ + + G
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLG 504
Query: 401 LGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHY 460
G A+ F +M G+KP+ VT V +L CSH+ +V +G F M+ ++G+ R EHY
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY 564
Query: 461 NCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYK-LMKLE 519
+C++DL RAG L + D +++P+EP++ + L AC HG+ + AA K L++ +
Sbjct: 565 SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETK 624
Query: 520 PENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNE 568
PE+ G ++LL+++YA W + ++ ++ D ++K ++ ++ +E
Sbjct: 625 PEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSE 673
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 187/431 (43%), Gaps = 56/431 (12%)
Query: 100 EALDTFCQMRAEGETASQFAL---SSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGS 156
EA TF +R + + +F L +S+L C G Q+H + SG + L
Sbjct: 64 EAFRTFSLLRYQS-GSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVP 122
Query: 157 NLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFI 216
L YS + +A + E + W +I Y++N F++++ YK+M++ +
Sbjct: 123 KLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRA 182
Query: 217 DQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVF 276
D+ S + AC AL F++G+ +H I ++ NAL +Y + G + A +F
Sbjct: 183 DEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLF 242
Query: 277 QSDSGCRNIVSFTAIVDGYVEMDQLEK--------------------------------- 303
S R+ VS+ AI++ Y ++L +
Sbjct: 243 DRMSE-RDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNY 301
Query: 304 --ALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVK---FNFDRDPFVS 358
ALN + +RN + + +KAC++ L+ G + H V++ F+ D D V
Sbjct: 302 IGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN-VR 360
Query: 359 SALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLK 418
++L+ MY +C H+ +F ++E + + WN+++ FA + EM+ G
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 419 PNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCII------DLLGRAGK 472
PN +T ++L + G ++ G + ++ R+ + +C+I D+ ++G+
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCY------ILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 473 LKEVEDFINSM 483
+ + +SM
Sbjct: 475 IIAAKRVFDSM 485
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 140/275 (50%), Gaps = 20/275 (7%)
Query: 16 SKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTF------LTNHLLNLYSKCGELDY 69
S A+ ++ C+ L GK H +IR C+F + N L+ +YS+C +L +
Sbjct: 320 SVAMINGLKACSHIGALKWGKVFHCLVIRS----CSFSHDIDNVRNSLITMYSRCSDLRH 375
Query: 70 AIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACAS 129
A +F ++ ++ +W ++I+GF + R E +M G + L+S+L A
Sbjct: 376 AFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFAR 435
Query: 130 LGSIQFGVQVHCLVVK-SGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTS 188
+G++Q G + HC +++ + L L ++L DMY+K GE+ A +VF+ M +D+V +TS
Sbjct: 436 VGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTS 495
Query: 189 MIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKA-----FSFGKSLHAI 243
+IDGY + G E AL +K M + D + + LSAC+ + F K H
Sbjct: 496 LIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVF 555
Query: 244 IVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS 278
++ E+ + + DLY ++G + A ++F +
Sbjct: 556 GIRLRLEHYS----CMVDLYCRAGYLDKARDIFHT 586
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 90/216 (41%), Gaps = 21/216 (9%)
Query: 300 QLEKALNAFIDLR-NSGIEPNEFTF---SSLIKACANQAKLEHGSLLHGQVVKFNFDRDP 355
QL +A F LR SG +EF +SL+ C + G LH + + D
Sbjct: 61 QLYEAFRTFSLLRYQSG--SHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDS 118
Query: 356 FVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDR 415
+ LV Y L D + + + E + WN L+G + ++ + ++ + M+ +
Sbjct: 119 VLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSK 178
Query: 416 GLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHY------NCIIDLLGR 469
G++ + T+ +++K C+ L++ Y ++G + H N +I + R
Sbjct: 179 GIRADEFTYPSVIKACAAL------LDFAYG-RVVHGSIEVSSHRCNLYVCNALISMYKR 231
Query: 470 AGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDK 505
GK+ + M E A W + + C T +K
Sbjct: 232 FGKVDVARRLFDRMS-ERDAVSWNAIIN-CYTSEEK 265
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/587 (29%), Positives = 294/587 (50%), Gaps = 36/587 (6%)
Query: 20 AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK 79
++L+ +K + K +HAQL+ G + T+ N L LY K G + A++LFD +
Sbjct: 8 SRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPD 67
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQAC------------ 127
+N ++W + G F++ ALD F +M E + S + S L +C
Sbjct: 68 KNTITWNVCLKGLFKNGYLNNALDLFDEM-PERDVVSWNTMISGLVSCGFHEYGIRVFFD 126
Query: 128 ----------------ASLGS-IQFGVQVHCLVVKSGFG-CELFLGSNLTDMYSKCGEVS 169
ASL + ++ G Q+H + SG L + +++ DMY + G
Sbjct: 127 MQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFD 186
Query: 170 DACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACT 229
A VF M +D V W +I +GN E AL + M + D++ + +S C+
Sbjct: 187 YALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICS 246
Query: 230 ALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFT 289
L+ S GK A+ +K GF + + A D++SK + + +F+ +++
Sbjct: 247 DLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLC-N 305
Query: 290 AIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF 349
+++ Y E AL FI + P++FTFSS++ + N L+HG+ +H V+K
Sbjct: 306 SMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKL 364
Query: 350 NFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETF 409
FD D V+++L++MY K G D ++ +F + + + WNT++ A++ ++ F
Sbjct: 365 GFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIF 424
Query: 410 NEMV-DRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLG 468
N+++ ++ LKP+ VT + +L C +AG V +G+ F SM+K +GV P EHY CII+LL
Sbjct: 425 NQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLC 484
Query: 469 RAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVL 528
R G + E +D + +PFEP++ W L A GD A+ A +++ EP++S +++
Sbjct: 485 RVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLV 544
Query: 529 LSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVE 575
L IY +WE+ LR + + +K G S + I E+ VF E
Sbjct: 545 LIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISI--ESSVFSFE 589
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 2/215 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D V+ ++ C+ +ELSKGKQ A I+ G L + + ++++SKC LD ++KLF
Sbjct: 234 DEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLF 293
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ K + V +MI + +AL F + +F SSVL + ++ +
Sbjct: 294 RELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLD 352
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G VH LV+K GF + + ++L +MY K G V A VF + KD + W ++I G
Sbjct: 353 HGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLA 412
Query: 195 KNGNFEKALIAYKKMVTDNVF-IDQHVLCSTLSAC 228
+N ++L + +++ + D+ L L AC
Sbjct: 413 RNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVAC 447
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 318 PNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQL 377
P+ FS L+ ++H Q+++ F R + + + +Y K G +++QL
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 378 FDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMV 437
FD+I + N WN + ++G NA++ F+EM +R + V++ ++ G G
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPER----DVVSWNTMISGLVSCGFH 117
Query: 438 EDGLNYFYSMDKIYGVMPREEHYNCIIDLL 467
E G+ F+ M + + + P E ++ + L+
Sbjct: 118 EYGIRVFFDMQR-WEIRPTEFTFSILASLV 146
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 255 bits (652), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 137/410 (33%), Positives = 230/410 (56%), Gaps = 2/410 (0%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
L+ C++ E G+Q+H +++ G + + + L+ Y++CGEL A++ FD M +++
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKD 248
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
++SWTA+I+ R +A+ F M ++F + S+L+AC+ +++FG QVH
Sbjct: 249 VISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHS 308
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
LVVK ++F+G++L DMY+KCGE+SD KVF+ M ++ V WTS+I + + G E+
Sbjct: 309 LVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEE 368
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTD 261
A+ ++ M ++ + + S L AC ++ A GK LHA I+K E +IG+ L
Sbjct: 369 AISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVW 428
Query: 262 LYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEF 321
LY K G+ A NV Q R++VS+TA++ G + +AL+ ++ G+EPN F
Sbjct: 429 LYCKCGESRDAFNVLQQLPS-RDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPF 487
Query: 322 TFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEI 381
T+SS +KACAN L G +H K + + FV SAL+ MY KCG + ++FD +
Sbjct: 488 TYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSM 547
Query: 382 ENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGC 431
N +W ++ +A++G R A++ M G + + F +L C
Sbjct: 548 PEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 204 bits (518), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 235/458 (51%), Gaps = 5/458 (1%)
Query: 36 KQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRS 95
K++HA ++ + N+L++ + G+L YA K+FD M ++N V+WTAMI G+ +
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 96 LRFREALDTFCQMRAEG-ETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFL 154
EA F G ++ +L C+ + G QVH +VK G G L +
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIV 220
Query: 155 GSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNV 214
S+L Y++CGE++ A + F+ M KD + WT++I + G+ KA+ + M+
Sbjct: 221 ESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF 280
Query: 215 FIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASN 274
++ +CS L AC+ KA FG+ +H+++VK + + F+G +L D+Y+K G++
Sbjct: 281 LPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRK 340
Query: 275 VFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQA 334
VF S RN V++T+I+ + E+A++ F ++ + N T S+++AC +
Sbjct: 341 VFDGMSN-RNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVG 399
Query: 335 KLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVG 394
L G LH Q++K + +++ ++ S LV +Y KCG + + ++ + + +W ++
Sbjct: 400 ALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMIS 459
Query: 395 VFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVM 454
+ G A++ EM+ G++PN T+ + LK C+++ + G + +S+ K +
Sbjct: 460 GCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRS-IHSIAKKNHAL 518
Query: 455 PREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGW 492
+ +I + + G + E +SMP E W
Sbjct: 519 SNVFVGSALIHMYAKCGFVSEAFRVFDSMP-EKNLVSW 555
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 172/314 (54%), Gaps = 1/314 (0%)
Query: 19 VAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS 78
V +++ C++ K L G+Q+H+ +++ F+ L+++Y+KCGE+ K+FD MS
Sbjct: 287 VCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS 346
Query: 79 KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ 138
RN V+WT++I R EA+ F M+ A+ + S+L+AC S+G++ G +
Sbjct: 347 NRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKE 406
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGN 198
+H ++K+ +++GS L +Y KCGE DA V +++P +D V WT+MI G G+
Sbjct: 407 LHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGH 466
Query: 199 FEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNA 258
+AL K+M+ + V + S L AC ++ G+S+H+I K F+G+A
Sbjct: 467 ESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSA 526
Query: 259 LTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEP 318
L +Y+K G + A VF S +N+VS+ A++ GY +AL + G E
Sbjct: 527 LIHMYAKCGFVSEAFRVFDSMPE-KNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEV 585
Query: 319 NEFTFSSLIKACAN 332
+++ F++++ C +
Sbjct: 586 DDYIFATILSTCGD 599
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 181/372 (48%), Gaps = 5/372 (1%)
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNG 197
++H + +K ++ G+NL + G++ A KVF+ MP K+ V WT+MIDGY+K G
Sbjct: 103 RIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYG 162
Query: 198 NFEKALIAYKKMVTDNV-FIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIG 256
++A ++ V + F ++ + L+ C+ F G+ +H +VK G +
Sbjct: 163 LEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVE 221
Query: 257 NALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI 316
++L Y++ G++ SA F ++++S+TA++ KA+ FI + N
Sbjct: 222 SSLVYFYAQCGELTSALRAFDMMEE-KDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF 280
Query: 317 EPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQ 376
PNEFT S++KAC+ + L G +H VVK D FV ++L+DMY KCG +
Sbjct: 281 LPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRK 340
Query: 377 LFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGM 436
+FD + N N W +++ A+ G G AI F M R L N +T V++L+ C G
Sbjct: 341 VFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGA 400
Query: 437 VEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFL 496
+ G + K + + ++ L + G+ ++ + + +P W + +
Sbjct: 401 LLLGKELHAQIIK-NSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVV-SWTAMI 458
Query: 497 GACKTHGDKERA 508
C + G + A
Sbjct: 459 SGCSSLGHESEA 470
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 126/227 (55%), Gaps = 3/227 (1%)
Query: 5 NLFRF---RHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLY 61
+LFR RH + ++ V +++ C L GK+LHAQ+I+ ++ + L+ LY
Sbjct: 371 SLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLY 430
Query: 62 SKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALS 121
KCGE A + ++ R++VSWTAMI+G EALD +M EG + F S
Sbjct: 431 CKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYS 490
Query: 122 SVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK 181
S L+ACA+ S+ G +H + K+ +F+GS L MY+KCG VS+A +VF+ MP K
Sbjct: 491 SALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEK 550
Query: 182 DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSAC 228
+ V W +MI GY +NG +AL +M + +D ++ + LS C
Sbjct: 551 NLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 63/108 (58%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM 82
++ CA ++ L G+ +H+ + L F+ + L+++Y+KCG + A ++FD M ++N+
Sbjct: 493 LKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNL 552
Query: 83 VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
VSW AMI G+ R+ REAL +M AEG + +++L C +
Sbjct: 553 VSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/462 (30%), Positives = 244/462 (52%), Gaps = 3/462 (0%)
Query: 18 AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM 77
+++ + ++ A A L +G + HA I+ G FL L+++Y KCG++ A ++FD +
Sbjct: 216 SLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEI 275
Query: 78 SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET-ASQFALSSVLQACASLGSIQFG 136
+R++V W AMI G + R EAL F M +E + + L+++L + +++ G
Sbjct: 276 VERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLG 335
Query: 137 VQVHCLVVKS-GFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVK 195
+VH V+KS + + F+ S L D+Y KCG+++ +VF ++ + WT+++ GY
Sbjct: 336 KEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAA 395
Query: 196 NGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFI 255
NG F++AL + M + D + + L C L+A GK +H +K F +
Sbjct: 396 NGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSL 455
Query: 256 GNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSG 315
+L +YSK G +F RN+ ++TA++D YVE L + F + S
Sbjct: 456 VTSLMVMYSKCGVPEYPIRLFDRLEQ-RNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSK 514
Query: 316 IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSI 375
P+ T ++ C++ L+ G LHG ++K F+ PFVS+ ++ MYGKCG +
Sbjct: 515 HRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSAN 574
Query: 376 QLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAG 435
FD + W ++ + + L R+AI F +MV RG PN TF +L CS AG
Sbjct: 575 FSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAG 634
Query: 436 MVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVE 477
V++ +F M ++Y + P EEHY+ +I+LL R G+++E +
Sbjct: 635 FVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQ 676
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/470 (29%), Positives = 254/470 (54%), Gaps = 18/470 (3%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
++ + L++ C + K L GKQ+H + G FL L+++Y+ CG + A K+F
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 169
Query: 75 DRMSKRNMVSWTAMITGFFRS--LRFREALDTFCQMRAEGETASQFALSSVLQACASLGS 132
D + N+ SW A++ G S R+++ L TF +MR G + ++LS+V ++ A +
Sbjct: 170 DESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASA 229
Query: 133 IQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDG 192
++ G++ H L +K+G +FL ++L DMY KCG+V A +VF+E+ +D V+W +MI G
Sbjct: 230 LRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAG 289
Query: 193 YVKNGNFEKALIAYKKMVT-DNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKF-GFE 250
N +AL ++ M++ + ++ + +L + L +KA GK +HA ++K +
Sbjct: 290 LAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYV 349
Query: 251 YETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID 310
+ F+ + L DLY K GDM S VF S RN +S+TA++ GY + ++AL + +
Sbjct: 350 EQPFVHSGLIDLYCKCGDMASGRRVFYG-SKQRNAISWTALMSGYAANGRFDQALRSIVW 408
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGL 370
++ G P+ T ++++ CA ++ G +H +K F + + ++L+ MY KCG+
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Query: 371 FDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKG 430
++ I+LFD +E N AW ++ + ++ R IE F M+ +P++VT +L
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTV 528
Query: 431 CSHAGMVEDGLNYFYSMDKIYGVMPREEHYNC------IIDLLGRAGKLK 474
CS ++ G +++G + ++E + II + G+ G L+
Sbjct: 529 CSDLKALKLG-------KELHGHILKKEFESIPFVSARIIKMYGKCGDLR 571
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 191/365 (52%), Gaps = 3/365 (0%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRG-GCLPCTFLTNHLLNLYSKCGELDYAIKL 73
+S + ++ K L GK++HA +++ + F+ + L++LY KCG++ ++
Sbjct: 315 NSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRV 374
Query: 74 FDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSI 133
F +RN +SWTA+++G+ + RF +AL + M+ EG +++VL CA L +I
Sbjct: 375 FYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAI 434
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
+ G ++HC +K+ F + L ++L MYSKCG ++F+ + ++ WT+MID Y
Sbjct: 435 KQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCY 494
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
V+N + + ++ M+ D + L+ C+ LKA GK LH I+K FE
Sbjct: 495 VENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIP 554
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
F+ + +Y K GD+ SA+ F + + +++TAI++ Y + A+N F + +
Sbjct: 555 FVSARIIKMYGKCGDLRSANFSFDA-VAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVS 613
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVK-FNFDRDPFVSSALVDMYGKCGLFD 372
G PN FTF++++ C+ ++ +++ +N S ++++ +CG +
Sbjct: 614 RGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVE 673
Query: 373 HSIQL 377
+ +L
Sbjct: 674 EAQRL 678
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 160/356 (44%), Gaps = 5/356 (1%)
Query: 89 ITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGF 148
I F R AL + G + S++L+AC S+ G QVH + +G
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 149 GCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNG--NFEKALIAY 206
FL + L MY+ CG V DA KVF+E + W +++ G V +G ++ L +
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 207 KKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKS 266
+M V ++ + L + + A G HA+ +K G F+ +L D+Y K
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKC 262
Query: 267 GDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL-RNSGIEPNEFTFSS 325
G + A VF + R+IV + A++ G + +AL F + I PN ++
Sbjct: 263 GKVGLARRVFD-EIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTT 321
Query: 326 LIKACANQAKLEHGSLLHGQVVKF-NFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENP 384
++ + L+ G +H V+K N+ PFV S L+D+Y KCG ++F +
Sbjct: 322 ILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQR 381
Query: 385 NDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG 440
N +W L+ +A +G A+ + M G +P+ VT +L C+ ++ G
Sbjct: 382 NAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQG 437
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 295 YVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRD 354
+ + LE AL L GI N TFS+L++AC + L HG +H + + +
Sbjct: 86 FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESN 145
Query: 355 PFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGR--NAIETFNEM 412
F+ + LV MY CG + ++FDE + N +WN L+ G R + + TF EM
Sbjct: 146 EFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEM 205
Query: 413 VDRGLKPNAVTFVNLLKGCSHAGMVEDGL 441
+ G+ N + N+ K + A + GL
Sbjct: 206 RELGVDLNVYSLSNVFKSFAGASALRQGL 234
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/481 (30%), Positives = 254/481 (52%), Gaps = 37/481 (7%)
Query: 120 LSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP 179
++ LQ + + + G ++H ++K+GF +L + L ++ KCG +S A +VF+E+P
Sbjct: 37 IAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELP 96
Query: 180 CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSAC-----TALKAF 234
+ MI GY+K+G ++ L+ ++M D + L L A T +
Sbjct: 97 KPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPR 156
Query: 235 SFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS---------------- 278
S + +HA I+K E + + AL D Y KSG + SA VF++
Sbjct: 157 SLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGY 216
Query: 279 --------------DSGCRNIVSFTAIVDGYVEMDQLEK-ALNAFIDLRNSGIEPNEFTF 323
+ ++IV + A+V+G+ + K +++ +I ++ +G PN TF
Sbjct: 217 MNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTF 276
Query: 324 SSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN 383
+S+I AC+ E G +H Q++K + S+L+DMY KCG + + ++FD+++
Sbjct: 277 ASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQE 336
Query: 384 PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNY 443
N +W +++ + ++G A+E F M + ++PN VTF+ L CSH+G+V+ G
Sbjct: 337 KNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEI 396
Query: 444 FYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHG 503
F SM + Y + P+ EHY CI+DL+GRAG L + +F +MP P + W + L +C HG
Sbjct: 397 FESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHG 456
Query: 504 DKERAKLAAYKLMKLEPEN-SGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSW 562
+ E A +AA +L KL + GA++ LSN+YA +W++V +R++++ + K G SW
Sbjct: 457 NVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Query: 563 V 563
Sbjct: 517 T 517
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 201/428 (46%), Gaps = 42/428 (9%)
Query: 13 LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIK 72
L +K +A +Q + GK++HA +I+ G P ++ LL L+ KCG L YA +
Sbjct: 31 LSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQ 90
Query: 73 LFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGS 132
+FD + K + ++ MI+G+ + +E L +M GE A + LS VL+A S GS
Sbjct: 91 VFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGS 150
Query: 133 IQFGVQ-----VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWT 187
+ VH ++K + L + L D Y K G++ A VFE M ++ V T
Sbjct: 151 TMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCT 210
Query: 188 SMIDGYVKNGNFEKA-----------LIAYKKMV--------TDNVFIDQHV-------- 220
SMI GY+ G E A ++ Y MV T +D ++
Sbjct: 211 SMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFH 270
Query: 221 -----LCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNV 275
S + AC+ L + G+ +HA I+K G +G++L D+Y+K G + A V
Sbjct: 271 PNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRV 330
Query: 276 FQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAK 335
F +N+ S+T+++DGY + E+AL F ++ IEPN TF + AC++
Sbjct: 331 FDQMQE-KNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGL 389
Query: 336 LEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCGLFDHSIQLFDEI-ENPNDTAWNTL 392
++ G + + ++ ++ P + + +VD+ G+ G + + + + E P+ W L
Sbjct: 390 VDKGYEIF-ESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAAL 448
Query: 393 VGVFAQHG 400
+ HG
Sbjct: 449 LSSCNLHG 456
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 168/360 (46%), Gaps = 39/360 (10%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + L+ T ++ +L + + + + CT + + +N G ++ A ++F
Sbjct: 174 DDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQ----GFVEDAEEIF 229
Query: 75 DRMSKRNMVSWTAMITGFFRSLRF-REALDTFCQMRAEGETASQFALSSVLQACASLGSI 133
+ +++V + AM+ GF RS + ++D + M+ G + +SV+ AC+ L S
Sbjct: 230 NTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSH 289
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
+ G QVH ++KSG + +GS+L DMY+KCG ++DA +VF++M K+ WTSMIDGY
Sbjct: 290 EVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGY 349
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
KNGN E+AL + +M + + LSAC+ H+ +V G+E
Sbjct: 350 GKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACS-----------HSGLVDKGYE--- 395
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
I ++ YS M + IVD L K AF R
Sbjct: 396 -IFESMQRDYSMKPKM----------------EHYACIVDLMGRAGDLNK---AFEFARA 435
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
P+ +++L+ +C +E S+ ++ K N D+ P AL ++Y +D+
Sbjct: 436 MPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDN 495
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
S + P ++ +L + N + G +H ++K F D +S L+ ++ KCG +
Sbjct: 29 SSLSPAKYIAGAL-QEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSY 87
Query: 374 SIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSH 433
+ Q+FDE+ P +A+N ++ + +HGL + + M G K + T +LK +
Sbjct: 88 ARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNS 147
Query: 434 AG 435
G
Sbjct: 148 RG 149
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 164/581 (28%), Positives = 280/581 (48%), Gaps = 81/581 (13%)
Query: 65 GELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVL 124
G + A++LFD M +RN+VSW ++TG R+ +A F M + + + +
Sbjct: 152 GRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYI 211
Query: 125 QACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEV 184
+ G++ L+ + +++ Y + G+V +A ++F EMP ++ V
Sbjct: 212 E--------NDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIV 263
Query: 185 LWTSMIDGYVKNGNFEKALIAYKKMV--TDNVFIDQHVLCSTLSACTALKA--FSFGKSL 240
WT+MI G+ N + +AL+ + +M D V + L S AC L G+ L
Sbjct: 264 SWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQL 323
Query: 241 HAIIVKFGFEYETFIG--------------------------------NALTDLYSKSGD 268
HA ++ G+E G N + + Y K+GD
Sbjct: 324 HAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGD 383
Query: 269 MVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAF-------------------- 308
+ A +F+ + VS+T+++DGY+E + +A F
Sbjct: 384 LERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQ 443
Query: 309 -----------IDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFN--FDRDP 355
D+ G++P T+S L+ + + L+ G +H + K +D D
Sbjct: 444 NELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDL 503
Query: 356 FVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDR 415
+ ++LV MY KCG + + ++F ++ + +WN+++ + HGL A+ F EM+D
Sbjct: 504 ILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDS 563
Query: 416 GLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKE 475
G KPN+VTF+ +L CSH+G++ GL F +M + Y + P +HY +IDLLGRAGKLKE
Sbjct: 564 GKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKE 623
Query: 476 VEDFINSMPFEPTAFGWCSFLGACKTHG-DKER---AKLAAYKLMKLEPENSGAHVLLSN 531
E+FI+++PF P + + LG C + DK+ A+ AA +L++L+P N+ HV L N
Sbjct: 624 AEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCN 683
Query: 532 IYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVF 572
+YA + + + +RK + +KK PG SWV + +VF
Sbjct: 684 VYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVF 724
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 2/175 (1%)
Query: 57 LLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETAS 116
+++ Y + G++ A LF ++ ++ V+WT MI+G ++ F EA M G
Sbjct: 406 MIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPL 465
Query: 117 QFALSSVLQACASLGSIQFGVQVHCLVVKSG--FGCELFLGSNLTDMYSKCGEVSDACKV 174
S +L + + ++ G +HC++ K+ + +L L ++L MY+KCG + DA ++
Sbjct: 466 NSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEI 525
Query: 175 FEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACT 229
F +M KD V W SMI G +G +KAL +K+M+ + LSAC+
Sbjct: 526 FAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACS 580
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 119/288 (41%), Gaps = 61/288 (21%)
Query: 156 SNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNV- 214
++L Y+K G + +A +FE MP ++ V +M+ GYVK +A +++M + V
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVS 140
Query: 215 -FIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSAS 273
+ LC + A++ F E N L ++GDM A
Sbjct: 141 WTVMLTALCDDGRSEDAVELFDEMP-----------ERNVVSWNTLVTGLIRNGDMEKAK 189
Query: 274 NVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQ 333
VF + R++VS+ A++ GY+E D +E+A F D+ E N T++S++
Sbjct: 190 QVFDAMPS-RDVVSWNAMIKGYIENDGMEEAKLLFGDMS----EKNVVTWTSMV------ 238
Query: 334 AKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKC--GLFDHSIQLFDEIENPNDTAWNT 391
YG C G + +LF E+ N +W
Sbjct: 239 -------------------------------YGYCRYGDVREAYRLFCEMPERNIVSWTA 267
Query: 392 LVGVFAQHGLGRNAIETFNEM---VDRGLKPNAVTFVNLLKGCSHAGM 436
++ FA + L R A+ F EM VD + PN T ++L C G+
Sbjct: 268 MISGFAWNELYREALMLFLEMKKDVD-AVSPNGETLISLAYACGGLGV 314
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRG-GCL-PCTFLTNHLLNLYSKCGELDYAIKLFDRMSK 79
L+ + L +GK +H + + C P L N L+++Y+KCG ++ A ++F +M +
Sbjct: 472 LLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ 531
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQV 139
++ VSW +MI G +AL+ F +M G+ + VL AC+ G I G+++
Sbjct: 532 KDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLEL 591
Query: 140 HCLVVKSGFGCELFLGS--NLTDMYSKCGEVSDACKVFEEMP 179
+K + + + ++ D+ + G++ +A + +P
Sbjct: 592 F-KAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALP 632
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/540 (29%), Positives = 258/540 (47%), Gaps = 41/540 (7%)
Query: 4 RNLFRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTF-LTNHLLNLYS 62
R L R L +S + +++ + K+L KQLH + G L C + N L++ Y
Sbjct: 204 RELVRMGASLTESSFLG-VLKGVSCVKDLDISKQLHCSATKKG-LDCEISVVNSLISAYG 261
Query: 63 KCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSS 122
KCG A ++F ++VSW A+I +S +AL F M G + +Q S
Sbjct: 262 KCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVS 321
Query: 123 VLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKD 182
VL + + + G Q+H +++K+G + LG+ L D Y+KCG + D+ F+ + K+
Sbjct: 322 VLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKN 381
Query: 183 EVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHA 242
V W +++ GY N + L + +M+ ++ + L +C + + LH+
Sbjct: 382 IVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL----QQLHS 436
Query: 243 IIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQL- 301
+IV+ G+E ++ ++L Y+K+ M A + SG ++V + Y Q
Sbjct: 437 VIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYH 496
Query: 302 ------------------------------EKALNAFIDLRNSGIEPNEFTFSSLIKACA 331
E+ + F + S I P+++TF S++ C+
Sbjct: 497 ESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCS 556
Query: 332 NQAKLEHGSLLHGQVVKFNFD-RDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWN 390
L GS +HG + K +F D FV + L+DMYGKCG +++F+E N W
Sbjct: 557 KLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWT 616
Query: 391 TLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKI 450
L+ HG G+ A+E F E + G KP+ V+F+++L C H GMV++G+ F M K
Sbjct: 617 ALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KD 675
Query: 451 YGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKL 510
YGV P +HY C +DLL R G LKE E I MPF A W +FL C +++R L
Sbjct: 676 YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAEEQRNTL 735
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 205/416 (49%), Gaps = 7/416 (1%)
Query: 19 VAQLIQTCAQAKELSKGKQLHAQLIR--GGCLPCTFLTNHLLNLYSKCGELDYAIKLFDR 76
V L+ C +A ++ K LHA I L ++ N++++LY K GE+ A K+FD+
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 77 MSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFG 136
M +RN VS+ +I G+ + +A F +MR G +Q +S +L +CASL ++ G
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASL-DVRAG 132
Query: 137 VQVHCLVVKSG-FGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVK 195
Q+H L +K G F + F+G+ L +Y + + A +VFE+MP K W M+
Sbjct: 133 TQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGH 192
Query: 196 NGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFI 255
G ++ + ++++V + + L + +K K LH K G + E +
Sbjct: 193 RGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISV 252
Query: 256 GNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSG 315
N+L Y K G+ A +FQ D+G +IVS+ AI+ + + KAL F+ + G
Sbjct: 253 VNSLISAYGKCGNTHMAERMFQ-DAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG 311
Query: 316 IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSI 375
PN+ T+ S++ + L G +HG ++K + + +AL+D Y KCG + S
Sbjct: 312 FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSR 371
Query: 376 QLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGC 431
FD I + N WN L+ +A G + F +M+ G +P TF LK C
Sbjct: 372 LCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/613 (23%), Positives = 265/613 (43%), Gaps = 97/613 (15%)
Query: 7 FRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGC-LPCTFLTNHLLNLYSKCG 65
R+ L + V+ L+ +CA + ++ G QLH ++ G + F+ LL LY +
Sbjct: 106 MRYFGYLPNQSTVSGLL-SCA-SLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLD 163
Query: 66 ELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQ 125
L+ A ++F+ M +++ +W M++ +E + F ++ G + ++ + VL+
Sbjct: 164 LLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLK 223
Query: 126 ACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVL 185
+ + + Q+HC K G CE+ + ++L Y KCG A ++F++ D V
Sbjct: 224 GVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVS 283
Query: 186 WTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIV 245
W ++I K+ N KAL + M +Q S L + ++ S G+ +H +++
Sbjct: 284 WNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLI 343
Query: 246 KFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKAL 305
K G E +GNAL D Y+K G++ + F +NIV + A++ GY D L
Sbjct: 344 KNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRD-KNIVCWNALLSGYANKDG-PICL 401
Query: 306 NAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALV--- 362
+ F+ + G P E+TFS+ +K+C +L+ LH +V+ ++ + +V S+L+
Sbjct: 402 SLFLQMLQMGFRPTEYTFSTALKSCC-VTELQQ---LHSVIVRMGYEDNDYVLSSLMRSY 457
Query: 363 -----------------------------DMYGKCGLFDHSIQLFDEIENPNDTAWNTLV 393
+Y + G + S++L +E P+ +WN +
Sbjct: 458 AKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAI 517
Query: 394 GVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGV 453
++ IE F M+ ++P+ TFV++L CS + G I+G+
Sbjct: 518 AACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLG-------SSIHGL 570
Query: 454 MPREEHY-------NCIIDLLGRAGKLKEV---------EDFIN---------------- 481
+ + + N +ID+ G+ G ++ V ++ I
Sbjct: 571 ITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQE 630
Query: 482 ---------SMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMK---LEPE----NSGA 525
S+ F+P + S L AC+ HG + + ++ MK +EPE
Sbjct: 631 ALEKFKETLSLGFKPDRVSFISILTACR-HGGMVKEGMGLFQKMKDYGVEPEMDHYRCAV 689
Query: 526 HVLLSNIYAKERQ 538
+L N Y KE +
Sbjct: 690 DLLARNGYLKEAE 702
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 164/555 (29%), Positives = 273/555 (49%), Gaps = 45/555 (8%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ + L++ +S +QLH + + G + T L+N L+ Y L+ A K+F
Sbjct: 54 DASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVF 113
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
D M +++SW ++++G+ +S RF+E + F ++ ++F+ ++ L ACA L
Sbjct: 114 DEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSP 173
Query: 135 FGVQVHCLVVKSGF-GCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
G +H +VK G + +G+ L DMY KCG + DA VF+ M KD V W +++
Sbjct: 174 LGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASC 233
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
+NG E L + +M +T
Sbjct: 234 SRNGKLELGLWFFHQMPNP---------------------------------------DT 254
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
N L D + KSGD +A V SD N S+ I+ GYV ++ +A F + +
Sbjct: 255 VTYNELIDAFVKSGDFNNAFQVL-SDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHS 313
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
SG+ +E++ S ++ A A A + GSL+H K D V+SAL+DMY KCG+ H
Sbjct: 314 SGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKH 373
Query: 374 SIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEM-VDRGLKPNAVTFVNLLKGCS 432
+ +F + N WN ++ +A++G AI+ FN++ +R LKP+ TF+NLL CS
Sbjct: 374 AELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCS 433
Query: 433 HAGM-VEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFG 491
H + +E L YF M Y + P EH +I +G+ G++ + + I F
Sbjct: 434 HCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVA 493
Query: 492 WCSFLGACKTHGDKERAKLAAYKLMKL--EPENSGAHVLLSNIYAKERQWEDVRCLRKMI 549
W + LGAC D + AK A K+++L ++ ++++SN+YA +W +V +RK++
Sbjct: 494 WRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIM 553
Query: 550 RDGNMKKLPGYSWVD 564
R+ + K G SW+D
Sbjct: 554 RESGVLKEVGSSWID 568
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 27/250 (10%)
Query: 271 SASNVFQSDSGCRNIVS---FTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLI 327
+ SN F + S + S ++ IV + L A ++L N G +P+ L+
Sbjct: 4 TVSNAFTTRSHVGSTASSNSWSTIVPALARFGSI-GVLRAAVELINDGEKPDASPLVHLL 62
Query: 328 KACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDT 387
+ N + LHG V K F + +S++L+ Y + + ++FDE+ +P+
Sbjct: 63 RVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVI 122
Query: 388 AWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS-----------HAGM 436
+WN+LV + Q G + I F E+ + PN +F L C+ H+ +
Sbjct: 123 SWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKL 182
Query: 437 VEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFL 496
V+ GL + + G NC+ID+ G+ G + + M E W + +
Sbjct: 183 VKLGLE---KGNVVVG--------NCLIDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIV 230
Query: 497 GACKTHGDKE 506
+C +G E
Sbjct: 231 ASCSRNGKLE 240
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 249 bits (637), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 257/512 (50%), Gaps = 41/512 (8%)
Query: 114 TASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCE-LFLGSNLT-DMYSKCGEVSDA 171
++S A S + C S+ + ++H L++ G E F+ L+ S G+V A
Sbjct: 5 SSSLVAKSILRHQCKSMSEL---YKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYA 61
Query: 172 CKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTAL 231
K ++ W +I G+ + N EK++ Y +M+ + D + + + L
Sbjct: 62 YKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRL 121
Query: 232 KAFSFGKSLHAIIVKFGFEYETFIGNALT------------------------------- 260
G SLH +VK G E++ FI N L
Sbjct: 122 SNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSIL 181
Query: 261 DLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL-RNSGIEPN 319
D Y+KSGD+VSA VF S R++V++++++DGYV+ + KAL F + R + N
Sbjct: 182 DAYAKSGDVVSARLVFDEMSE-RDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKAN 240
Query: 320 EFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLF- 378
E T S+I ACA+ L G +H ++ + + ++L+DMY KCG + +F
Sbjct: 241 EVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFY 300
Query: 379 -DEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMV 437
++ + WN ++G A HG R +++ F++M + + P+ +TF+ LL CSH G+V
Sbjct: 301 RASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLV 360
Query: 438 EDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLG 497
++ ++F S+ K G P+ EHY C++D+L RAG +K+ DFI+ MP +PT + L
Sbjct: 361 KEAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLN 419
Query: 498 ACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKL 557
C HG+ E A+ KL++L+P N G +V L+N+YA +Q+ R +R+ + +KK+
Sbjct: 420 GCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKI 479
Query: 558 PGYSWVDIGNETHVFGVEDWSHPRKKEIYEKL 589
G+S +D+ H F D +H +IY L
Sbjct: 480 AGHSILDLDGTRHRFIAHDKTHFHSDKIYAVL 511
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 194/446 (43%), Gaps = 69/446 (15%)
Query: 28 QAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNL--YSKCGELDYAIKLFDRMSKRNMVSW 85
Q K +S+ ++H LI G + L+ S G++DYA K ++S W
Sbjct: 17 QCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGW 76
Query: 86 TAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVK 145
+I GF S +++ + QM G ++++ + L + + G +HC VVK
Sbjct: 77 NFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVK 136
Query: 146 SGFGCELFLGSNLT-------------------------------DMYSKCGEVSDACKV 174
SG +LF+ + L D Y+K G+V A V
Sbjct: 137 SGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLV 196
Query: 175 FEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMV-TDNVFIDQHVLCSTLSACTALKA 233
F+EM +D V W+SMIDGYVK G + KAL + +M+ + ++ + S + AC L A
Sbjct: 197 FDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGA 256
Query: 234 FSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVF-QSDSGCRNIVSFTAIV 292
+ GK++H I+ + +L D+Y+K G + A +VF ++ + + + AI+
Sbjct: 257 LNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAII 316
Query: 293 DGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFD 352
G + ++L F +R S I+P+E TF L+ AC+ HG +VK +
Sbjct: 317 GGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACS-----------HGGLVKEAWH 365
Query: 353 RDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEM 412
F S L + P + +V V ++ GL ++A + +EM
Sbjct: 366 ---FFKS-----------------LKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEM 405
Query: 413 VDRGLKPNAVTFVNLLKGCSHAGMVE 438
+KP LL GC + G +E
Sbjct: 406 ---PIKPTGSMLGALLNGCINHGNLE 428
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
Query: 18 AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCT-FLTNHLLNLYSKCGELDYAIKLFDR 76
+ +I CA L++GK +H + I LP T L L+++Y+KCG + A +F R
Sbjct: 243 TMVSVICACAHLGALNRGKTVH-RYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYR 301
Query: 77 MSKR--NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
S + + + W A+I G RE+L F +MR + +L AC+ G ++
Sbjct: 302 ASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVK 361
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDE-VLWTSMIDGY 193
+ +SG + + + D+ S+ G V DA EMP K + ++++G
Sbjct: 362 EAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGC 421
Query: 194 VKNGNFEKALIAYKKMV 210
+ +GN E A KK++
Sbjct: 422 INHGNLELAETVGKKLI 438
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 153/500 (30%), Positives = 249/500 (49%), Gaps = 64/500 (12%)
Query: 171 ACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTA 230
A +M + ++ ++ G+V + ++L Y +M+ D+V + S + A +
Sbjct: 824 AVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSF 883
Query: 231 LKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSG----------------------- 267
A FG+SL A I KFGF + I L D YS +G
Sbjct: 884 --ASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTM 941
Query: 268 --------DMVSAS-------------------------NVFQSDS-----GCRNIVSFT 289
DM SA+ N+ Q++S ++I+S+T
Sbjct: 942 VSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWT 1001
Query: 290 AIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF 349
++ GY + + +A+ F + GI P+E T S++I ACA+ LE G +H ++
Sbjct: 1002 TMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQN 1061
Query: 350 NFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETF 409
F D ++ SALVDMY KCG + ++ +F + N WN+++ A HG + A++ F
Sbjct: 1062 GFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMF 1121
Query: 410 NEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGR 469
+M +KPNAVTFV++ C+HAG+V++G + SM Y ++ EHY ++ L +
Sbjct: 1122 AKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSK 1181
Query: 470 AGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLL 529
AG + E + I +M FEP A W + L C+ H + A++A KLM LEP NSG + LL
Sbjct: 1182 AGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLL 1241
Query: 530 SNIYAKERQWEDVRCLRKMIRDGNMKKL-PGYSWVDIGNETHVFGVEDWSHPRKKEIYEK 588
++YA++ +W DV +R +R+ ++K+ PG S + I H+F D SH E+
Sbjct: 1242 VSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLL 1301
Query: 589 LDSLLDQIKIVGYVPQTESV 608
LD + DQ+ + GYV +TE+V
Sbjct: 1302 LDEIYDQMGLAGYVQETENV 1321
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 178/360 (49%), Gaps = 11/360 (3%)
Query: 54 TNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGE 113
+N L+N Y G L+ A LF++M ++++SWT MI G+ ++ R+REA+ F +M EG
Sbjct: 969 SNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI 1028
Query: 114 TASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACK 173
+ +S+V+ ACA LG ++ G +VH +++GF ++++GS L DMYSKCG + A
Sbjct: 1029 IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALL 1088
Query: 174 VFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKA 233
VF +P K+ W S+I+G +G ++AL + KM ++V + S +ACT
Sbjct: 1089 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
Query: 234 FSFGKSLH-AIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIV 292
G+ ++ ++I + + L+SK+G + A + + N V + A++
Sbjct: 1149 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Query: 293 DGYVEMDQLEKALNAFIDLRNSGIEP-NEFTFSSLIKACANQAKLEHGSLLHGQVVKFNF 351
DG L A AF L +EP N + L+ A Q + + + G++ +
Sbjct: 1209 DGCRIHKNLVIAEIAFNKLM--VLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGI 1266
Query: 352 DRD-PFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFN 410
++ P SS +D DH D+ + +D L ++ Q GL ET N
Sbjct: 1267 EKICPGTSSIRIDKR------DHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETEN 1320
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 191/441 (43%), Gaps = 78/441 (17%)
Query: 21 QLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKR 80
++I+ C+ K L A +I+ L N + + LD A+ +M +
Sbjct: 778 KIIKQCSTPKLLESAL---AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEP 834
Query: 81 NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVH 140
N+ + A+ GF +L+ + +M + + S + SS+++A +S S +FG +
Sbjct: 835 NVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA-SSFAS-RFGESLQ 892
Query: 141 CLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSM----------- 189
+ K GFG + + + L D YS G + +A KVF+EMP +D++ WT+M
Sbjct: 893 AHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMD 952
Query: 190 --------------------IDGYVKNGNFEK---------------------------- 201
I+GY+ GN E+
Sbjct: 953 SANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKR 1012
Query: 202 ---ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNA 258
A+ + KM+ + + D+ + + +SAC L GK +H ++ GF + +IG+A
Sbjct: 1013 YREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSA 1072
Query: 259 LTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEP 318
L D+YSK G + A VF + +N+ + +I++G ++AL F + ++P
Sbjct: 1073 LVDMYSKCGSLERALLVF-FNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKP 1131
Query: 319 NEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS-----ALVDMYGKCGLFDH 373
N TF S+ AC + ++ G ++ ++ D VS+ +V ++ K GL
Sbjct: 1132 NAVTFVSVFTACTHAGLVDEGRRIYRSMI----DDYSIVSNVEHYGGMVHLFSKAGLIYE 1187
Query: 374 SIQLFDEIE-NPNDTAWNTLV 393
+++L +E PN W L+
Sbjct: 1188 ALELIGNMEFEPNAVIWGALL 1208
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 99/200 (49%), Gaps = 2/200 (1%)
Query: 13 LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIK 72
+ D ++ +I CA L GK++H ++ G + ++ + L+++YSKCG L+ A+
Sbjct: 1029 IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALL 1088
Query: 73 LFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGS 132
+F + K+N+ W ++I G +EAL F +M E + SV AC G
Sbjct: 1089 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
Query: 133 IQFGVQVH-CLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMI 190
+ G +++ ++ + + ++SK G + +A ++ M + + V+W +++
Sbjct: 1149 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Query: 191 DGYVKNGNFEKALIAYKKMV 210
DG + N A IA+ K++
Sbjct: 1209 DGCRIHKNLVIAEIAFNKLM 1228
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/496 (30%), Positives = 233/496 (46%), Gaps = 39/496 (7%)
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYS-KCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKN 196
QV ++ SG FL L + + +S A +F+ + L+ +++ Y +
Sbjct: 42 QVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSS 101
Query: 197 GNFE--KALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSL-HAIIVKFGFEYET 253
A ++ MV +V H + + T + +F L H + K GF
Sbjct: 102 LPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYV 161
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL-- 311
+ AL Y+ S ++ + + RN+VS+TA++ GY + A+ F D+
Sbjct: 162 VVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPE 221
Query: 312 ------------------------------RNSGIEPNEFTFSSLIKACANQAKLEHGSL 341
I PNE T ++ ACA L+
Sbjct: 222 RDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKG 281
Query: 342 LHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGL 401
+H + + D FVS++LVD+YGKCG + + +F + TAWN+++ FA HG
Sbjct: 282 IHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGR 341
Query: 402 GRNAIETFNEMVD---RGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREE 458
AI F EM+ +KP+ +TF+ LL C+H G+V G YF M +G+ PR E
Sbjct: 342 SEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIE 401
Query: 459 HYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKL 518
HY C+IDLLGRAG+ E + +++M + W S L ACK HG + A++A L+ L
Sbjct: 402 HYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVAL 461
Query: 519 EPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWS 578
P N G +++N+Y + WE+ R RKMI+ N K PG+S ++I NE H F D S
Sbjct: 462 NPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKS 521
Query: 579 HPRKKEIYEKLDSLLD 594
HP +EIY LDSL+
Sbjct: 522 HPETEEIYMILDSLIS 537
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 189/422 (44%), Gaps = 55/422 (13%)
Query: 27 AQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYS-KCGELDYAIKLFDRMSKRNMVSW 85
++++ L+ KQ+ + +I G FL LL + + L YA +FDR S N +
Sbjct: 32 SKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLY 91
Query: 86 TAMITGFFRSLRFR--EALDTFCQMRAEG-ETASQFALSSVLQACASLGSIQFGVQVHCL 142
A++T + SL A F M + F VL++ L S VH
Sbjct: 92 AAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTH 151
Query: 143 VVKSGFGCELFLGSNLTDMY-SKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVK------ 195
+ KSGF + + + L Y S ++ A ++F+EM ++ V WT+M+ GY +
Sbjct: 152 LFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISN 211
Query: 196 -------------------------NGNFEKALIAYKKMVTD-NVFIDQHVLCSTLSACT 229
NG F +A+ +++M+ + ++ ++ + LSAC
Sbjct: 212 AVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACA 271
Query: 230 ALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFT 289
K +HA + + F+ N+L DLY K G++ AS+VF+ S +++ ++
Sbjct: 272 QTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASK-KSLTAWN 330
Query: 290 AIVDGYVEMDQLEKALNAF---IDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLL---- 342
++++ + + E+A+ F + L + I+P+ TF L+ AC HG L+
Sbjct: 331 SMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACT------HGGLVSKGR 384
Query: 343 -HGQVVKFNFDRDPFVS--SALVDMYGKCGLFDHSIQLFDEIENPNDTA-WNTLVGVFAQ 398
+ ++ F +P + L+D+ G+ G FD ++++ ++ D A W +L+
Sbjct: 385 GYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKI 444
Query: 399 HG 400
HG
Sbjct: 445 HG 446
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 7/201 (3%)
Query: 19 VAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS 78
V ++ CAQ L K +HA R F++N L++LY KCG L+ A +F S
Sbjct: 263 VVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMAS 322
Query: 79 KRNMVSWTAMITGFFRSLRFREALDTFCQM---RAEGETASQFALSSVLQACASLGSIQF 135
K+++ +W +MI F R EA+ F +M +L AC G +
Sbjct: 323 KKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSK 382
Query: 136 GVQVHCLVVKSGFGCELFLGSN--LTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMIDG 192
G L+ FG E + L D+ + G +A +V M K DE +W S+++
Sbjct: 383 GRGYFDLMTNR-FGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNA 441
Query: 193 YVKNGNFEKALIAYKKMVTDN 213
+G+ + A +A K +V N
Sbjct: 442 CKIHGHLDLAEVAVKNLVALN 462
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/501 (30%), Positives = 258/501 (51%), Gaps = 15/501 (2%)
Query: 69 YAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACA 128
+A LFD + +R++ S + ++ RS + L F Q+ S + VL AC+
Sbjct: 36 HADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACS 95
Query: 129 SLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTS 188
L + G QVH L++K G + L DMYSK G + D+ +VFE + KD V W +
Sbjct: 96 LLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNA 155
Query: 189 MIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFG 248
++ G+++NG ++AL + M + V I + L S + C +LK GK +HA++V G
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG 215
Query: 249 FEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAF 308
+ +G A+ YS G + A V+ S + + V +++ G + ++A
Sbjct: 216 RDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF--- 271
Query: 309 IDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKC 368
L S PN SS + C++ + L G +H ++ F D + + L+DMYGKC
Sbjct: 272 --LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKC 329
Query: 369 GLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDR--GLKPNAVTFVN 426
G + +F I + + +W +++ +A +G G A+E F EM + G+ PN+VTF+
Sbjct: 330 GQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLV 389
Query: 427 LLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFE 486
++ C+HAG+V++G F M + Y ++P EHY C ID+L +AG+ +E+ + M
Sbjct: 390 VISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMEN 449
Query: 487 -----PTAFGWCSFLGACKTHGDKERAKLAAYKLM-KLEPENSGAHVLLSNIYAKERQWE 540
P A W + L AC + D R + A +LM + PEN+ +VL+SN YA +W+
Sbjct: 450 DNQSIPCAI-WVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWD 508
Query: 541 DVRCLRKMIRDGNMKKLPGYS 561
V LR +++ + K G+S
Sbjct: 509 VVEELRGKLKNKGLVKTAGHS 529
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 203/378 (53%), Gaps = 14/378 (3%)
Query: 16 SKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFD 75
S ++ C+ G+Q+HA +I+ G T L+++YSK G L ++++F+
Sbjct: 84 SHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFE 143
Query: 76 RMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQF 135
+ ++++VSW A+++GF R+ + +EAL F M E S+F LSSV++ CASL +Q
Sbjct: 144 SVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQ 203
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPC-KDEVLWTSMIDGYV 194
G QVH +VV +G + LG+ + YS G +++A KV+ + DEV+ S+I G +
Sbjct: 204 GKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCI 262
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+N N+++A + + NV VL S+L+ C+ GK +H + ++ GF ++
Sbjct: 263 RNRNYKEAFLLMSRQ-RPNV----RVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSK 317
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL--R 312
+ N L D+Y K G +V A +F++ +++VS+T+++D Y KAL F ++
Sbjct: 318 LCNGLMDMYGKCGQIVQARTIFRAIPS-KSVVSWTSMIDAYAVNGDGVKALEIFREMCEE 376
Query: 313 NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS--ALVDMYGKCGL 370
SG+ PN TF +I ACA+ ++ G G ++K + P +D+ K G
Sbjct: 377 GSGVLPNSVTFLVVISACAHAGLVKEGKECFG-MMKEKYRLVPGTEHYVCFIDILSKAGE 435
Query: 371 FDHSIQLFDE-IENPNDT 387
+ +L + +EN N +
Sbjct: 436 TEEIWRLVERMMENDNQS 453
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/460 (30%), Positives = 242/460 (52%), Gaps = 39/460 (8%)
Query: 168 VSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSA 227
+ +A KVF+E+P D + T++I +VK +A A+K+++ + ++ + + +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 228 CTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVS 287
T + GK LH +K G F+G+A+ + Y K + A F D+ N+VS
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFD-DTRDPNVVS 161
Query: 288 FTAIVDGYVEMDQLEKAL-------------------------------NAFID-LRNSG 315
T ++ GY++ + E+AL N F+D LR
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 316 IEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDR-DPFVSSALVDMYGKCGLFDHS 374
+ PNE TF I A +N A G +H +KF R + FV ++L+ Y KCG + S
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 375 IQLFDEIENP--NDTAWNTLVGVFAQHGLGRNAIETFNEMV-DRGLKPNAVTFVNLLKGC 431
+ F+++E N +WN+++ +A +G G A+ F +MV D L+PN VT + +L C
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 432 SHAGMVEDGLNYFYSMDKIYG--VMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTA 489
+HAG++++G YF Y + EHY C++D+L R+G+ KE E+ I SMP +P
Sbjct: 342 NHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGI 401
Query: 490 FGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMI 549
W + LG C+ H +K AKLAA K+++L+P + ++V+LSN Y+ W++V +R+ +
Sbjct: 402 GFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKM 461
Query: 550 RDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKL 589
++ +K+ G SW+++ ++ VF D ++ K E+Y L
Sbjct: 462 KETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML 501
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 174/366 (47%), Gaps = 43/366 (11%)
Query: 70 AIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACAS 129
A K+FD + + +++S TA+I F + R EA F ++ G ++F +V+ + +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 130 LGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEE------------ 177
++ G Q+HC +K G +F+GS + + Y K ++DA + F++
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNL 165
Query: 178 -------------------MPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFI-D 217
MP + V W ++I G+ + G E+A+ + M+ + V I +
Sbjct: 166 ISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPN 225
Query: 218 QHVLCSTLSACTALKAFSFGKSLHAIIVKF-GFEYETFIGNALTDLYSKSGDMVSASNVF 276
+ ++A + + + GKS+HA +KF G + F+ N+L YSK G+M + F
Sbjct: 226 ESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAF 285
Query: 277 QS-DSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL-RNSGIEPNEFTFSSLIKACANQA 334
+ RNIVS+ +++ GY + E+A+ F + +++ + PN T ++ AC +
Sbjct: 286 NKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAG 345
Query: 335 KLEHGSLLHGQVVKFNFDRDPFV-----SSALVDMYGKCGLFDHSIQLFDEIE-NPNDTA 388
++ G + + V ++D DP + + +VDM + G F + +L + +P
Sbjct: 346 LIQEGYMYFNKAVN-DYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGF 403
Query: 389 WNTLVG 394
W L+G
Sbjct: 404 WKALLG 409
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 120/266 (45%), Gaps = 47/266 (17%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCG---------------- 65
+I + ++++ GKQLH ++ G F+ + +LN Y K
Sbjct: 99 VIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPN 158
Query: 66 ---------------ELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRA 110
E + A+ LF M +R++V+W A+I GF ++ R EA++TF M
Sbjct: 159 VVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLR 218
Query: 111 EGET-ASQFALSSVLQACASLGSIQFGVQVHCLVVK-SGFGCELFLGSNLTDMYSKCGEV 168
EG ++ + A +++ S G +H +K G +F+ ++L YSKCG +
Sbjct: 219 EGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNM 278
Query: 169 SDACKVFE--EMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTD-NVFIDQHVLCSTL 225
D+ F E ++ V W SMI GY NG E+A+ ++KMV D N+ + + L
Sbjct: 279 EDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVL 338
Query: 226 SACTALKAFSFGKSLHAIIVKFGFEY 251
AC HA +++ G+ Y
Sbjct: 339 FACN-----------HAGLIQEGYMY 353
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 8/184 (4%)
Query: 35 GKQLHAQLIRG-GCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM--SKRNMVSWTAMITG 91
GK +HA I+ G F+ N L++ YSKCG ++ ++ F+++ +RN+VSW +MI G
Sbjct: 245 GKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWG 304
Query: 92 FFRSLRFREALDTFCQMRAEGE-TASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFG- 149
+ + R EA+ F +M + + + VL AC G IQ G V
Sbjct: 305 YAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDP 364
Query: 150 --CELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEV-LWTSMIDGYVKNGNFEKALIAY 206
EL + + DM S+ G +A ++ + MP + W +++ G + N A +A
Sbjct: 365 NLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAA 424
Query: 207 KKMV 210
K++
Sbjct: 425 SKIL 428
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 143/430 (33%), Positives = 228/430 (53%), Gaps = 13/430 (3%)
Query: 166 GEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTL 225
G ++ A KVF EM K+ VLWTSMI+GY+ N + A + ++ + ++ +
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 226 SACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNI 285
L+A S + + N + + Y+ GDM + VF D RN+
Sbjct: 102 EMGNMLEARSLFDQMPC--------RDVMSWNTVLEGYANIGDMEACERVFD-DMPERNV 152
Query: 286 VSFTAIVDGYVEMDQLEKALNAFIDLRNSG-IEPNEFTFSSLIKACANQAKLEHGSLLH- 343
S+ ++ GY + ++ + L +F + + G + PN+ T + ++ ACA + G +H
Sbjct: 153 FSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHK 212
Query: 344 -GQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLG 402
G+ + +N D V +AL+DMYGKCG + ++++F I+ + +WNT++ A HG G
Sbjct: 213 YGETLGYN-KVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHG 271
Query: 403 RNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNC 462
A+ F+EM + G+ P+ VTFV +L C H G+VEDGL YF SM + +MP EH C
Sbjct: 272 TEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGC 331
Query: 463 IIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPEN 522
++DLL RAG L + +FIN MP + A W + LGA K + + ++A +L+KLEP N
Sbjct: 332 VVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRN 391
Query: 523 SGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRK 582
V+LSNIY +++D L+ +RD KK G SW++ + F HPR
Sbjct: 392 PANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRT 451
Query: 583 KEIYEKLDSL 592
+E+ L L
Sbjct: 452 EELQRILREL 461
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 182/392 (46%), Gaps = 22/392 (5%)
Query: 57 LLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETAS 116
L + G + A K+F M ++N+V WT+MI G+ + A F + E +
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF-DLSPERDI-- 90
Query: 117 QFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSN-LTDMYSKCGEVSDACKVF 175
VL G I+ G + + C + N + + Y+ G++ +VF
Sbjct: 91 ------VLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVF 144
Query: 176 EEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTD-NVFIDQHVLCSTLSACTALKAF 234
++MP ++ W +I GY +NG + L ++K+MV + +V + + LSAC L AF
Sbjct: 145 DDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAF 204
Query: 235 SFGKSLHAIIVKFGF-EYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVD 293
FGK +H G+ + + + NAL D+Y K G + A VF+ R+++S+ +++
Sbjct: 205 DFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKR-RDLISWNTMIN 263
Query: 294 GYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHG-SLLHGQVVKFNFD 352
G +ALN F +++NSGI P++ TF ++ AC + +E G + + F+
Sbjct: 264 GLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIM 323
Query: 353 RDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTA-WNTLVG---VFAQHGLGRNAIET 408
+ +VD+ + G +++ +++ D W TL+G V+ + +G A+E
Sbjct: 324 PEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEE 383
Query: 409 FNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG 440
++ R N FV L AG +D
Sbjct: 384 LIKLEPR----NPANFVMLSNIYGDAGRFDDA 411
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 150/335 (44%), Gaps = 41/335 (12%)
Query: 48 LPCTFLT--NHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTF 105
+PC + N +L Y+ G+++ ++FD M +RN+ SW +I G+ ++ R E L +F
Sbjct: 116 MPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSF 175
Query: 106 CQMRAEGETASQFA-LSSVLQACASLGSIQFGVQVHCLVVKSGFG-CELFLGSNLTDMYS 163
+M EG A ++ VL ACA LG+ FG VH G+ ++ + + L DMY
Sbjct: 176 KRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYG 235
Query: 164 KCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCS 223
KCG + A +VF+ + +D + W +MI+G +G+ +AL + +M + D+
Sbjct: 236 KCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVG 295
Query: 224 TLSACTALKAFSFGKS-LHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGC 282
L AC + G + +++ F E + DL S++G + A
Sbjct: 296 VLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQA---------- 345
Query: 283 RNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLL 342
V F + ++ + +++L+ A K++ G +
Sbjct: 346 ---VEF----------------------INKMPVKADAVIWATLLGASKVYKKVDIGEVA 380
Query: 343 HGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQL 377
+++K R+P L ++YG G FD + +L
Sbjct: 381 LEELIKLE-PRNPANFVMLSNIYGDAGRFDDAARL 414
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/535 (27%), Positives = 264/535 (49%), Gaps = 35/535 (6%)
Query: 20 AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK 79
A ++++C +L +QLH +++ G L ++++Y KC + A ++FD +
Sbjct: 166 AGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVN 225
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQV 139
+ VSW ++ + EA+ F +M +SSV+ AC+ +++ G +
Sbjct: 226 PSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVI 285
Query: 140 HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEE---------------------- 177
H + VK + + +++ DMY KC + A +VF++
Sbjct: 286 HAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLT 345
Query: 178 ---------MPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSAC 228
MP ++ V W +M+ GYV +++AL M + ID L L+ C
Sbjct: 346 REARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVC 405
Query: 229 TALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSF 288
+ + GK H I + G++ + NAL D+Y K G + SA+ F+ S R+ VS+
Sbjct: 406 SGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSW 465
Query: 289 TAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVK 348
A++ G + + E+AL+ F ++ +P+++T ++L+ CAN L G +HG +++
Sbjct: 466 NALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIR 524
Query: 349 FNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIET 408
+ D + A+VDMY KC FD++I++F E + WN+++ ++G + E
Sbjct: 525 DGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFEL 584
Query: 409 FNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLG 468
F + + G+KP+ VTF+ +L+ C G VE G YF SM Y + P+ EHY+C+I+L
Sbjct: 585 FMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYC 644
Query: 469 RAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMK---LEP 520
+ G L ++E+F+ MPF+P AC+ + + AA +LM L+P
Sbjct: 645 KYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLMNDHYLQP 699
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 222/444 (50%), Gaps = 32/444 (7%)
Query: 21 QLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKR 80
+L ++C+ + + +++ + L+ LP FL N + Y KCG +D A +LF+ M +R
Sbjct: 66 RLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPER 125
Query: 81 NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVH 140
+ SW A+IT ++ E F +M +G A++ + + VL++C + ++ Q+H
Sbjct: 126 DGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLH 185
Query: 141 CLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFE 200
C VVK G+ + L +++ D+Y KC +SDA +VF+E+ +V W ++ Y++ G +
Sbjct: 186 CAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFND 245
Query: 201 KALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALT 260
+A++ + KM+ NV H + S + AC+ A GK +HAI VK +T + ++
Sbjct: 246 EAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVF 305
Query: 261 DLYSKSGDMVSASNVFQSD-----------------SGC-------------RNIVSFTA 290
D+Y K + SA VF SG RNIVS+ A
Sbjct: 306 DMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNA 365
Query: 291 IVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFN 350
++ GYV + ++AL+ +R + T ++ C+ + ++ G HG + +
Sbjct: 366 MLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHG 425
Query: 351 FDRDPFVSSALVDMYGKCGLFDHSIQLFDEI-ENPNDTAWNTLVGVFAQHGLGRNAIETF 409
+D + V++AL+DMYGKCG + F ++ E ++ +WN L+ A+ G A+ F
Sbjct: 426 YDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFF 485
Query: 410 NEMVDRGLKPNAVTFVNLLKGCSH 433
M KP+ T LL GC++
Sbjct: 486 EGMQVEA-KPSKYTLATLLAGCAN 508
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 172/354 (48%), Gaps = 34/354 (9%)
Query: 18 AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM 77
V+ ++ C+++ L GK +HA ++ + T ++ + ++Y KC L+ A ++FD+
Sbjct: 265 TVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQT 324
Query: 78 SKRNMVSWTA-------------------------------MITGFFRSLRFREALDTFC 106
+++ SWT+ M+ G+ + + EALD
Sbjct: 325 RSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLT 384
Query: 107 QMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCG 166
MR E E L +L C+ + +Q G Q H + + G+ + + + L DMY KCG
Sbjct: 385 LMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCG 444
Query: 167 EVSDACKVFEEMP-CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTL 225
+ A F +M +DEV W +++ G + G E+AL ++ M + ++ L + L
Sbjct: 445 TLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVE-AKPSKYTLATLL 503
Query: 226 SACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNI 285
+ C + A + GK++H +++ G++ + I A+ D+YSK A VF+ ++ R++
Sbjct: 504 AGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFK-EAATRDL 562
Query: 286 VSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHG 339
+ + +I+ G + ++ F+ L N G++P+ TF +++AC + +E G
Sbjct: 563 ILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELG 616
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 127/255 (49%), Gaps = 3/255 (1%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ + ++ C+ ++ GKQ H + R G + N LL++Y KCG L A F
Sbjct: 394 DNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWF 453
Query: 75 DRMSK-RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSI 133
+MS+ R+ VSW A++TG R R +AL F M+ E + S++ L+++L CA++ ++
Sbjct: 454 RQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAK-PSKYTLATLLAGCANIPAL 512
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGY 193
G +H +++ G+ ++ + + DMYSKC A +VF+E +D +LW S+I G
Sbjct: 513 NLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGC 572
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFG-KSLHAIIVKFGFEYE 252
+NG ++ + + + V D L AC G + ++ K+ +
Sbjct: 573 CRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQ 632
Query: 253 TFIGNALTDLYSKSG 267
+ + +LY K G
Sbjct: 633 VEHYDCMIELYCKYG 647
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
Query: 227 ACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIV 286
+C++ + + + +V F F+ N + Y K G + A +F+ + R+
Sbjct: 70 SCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFE-EMPERDGG 128
Query: 287 SFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQV 346
S+ A++ + ++ F + G+ E +F+ ++K+C L LH V
Sbjct: 129 SWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAV 188
Query: 347 VKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAI 406
VK+ + + + +++VD+YGKC + + ++FDEI NP+D +WN +V + + G A+
Sbjct: 189 VKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAV 248
Query: 407 ETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG 440
F +M++ ++P T +++ CS + +E G
Sbjct: 249 VMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG 282
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/530 (28%), Positives = 264/530 (49%), Gaps = 6/530 (1%)
Query: 36 KQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRS 95
++LH+ + + + L Y+ +L A KLFD +R++ W ++I + ++
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 96 LRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLG 155
+F L F Q+ F + + + + + +H + + SG G + G
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 156 SNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVF 215
S + YSK G + +A K+F +P D LW MI GY G ++K + + M
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 216 IDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNV 275
+ + + + S S+HA +K + +++G AL ++YS+ + SA +V
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 276 FQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAK 335
F S S ++V+ ++++ GY ++AL+ F +LR SG +P+ + ++ +CA +
Sbjct: 265 FNSISE-PDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSD 323
Query: 336 LEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGV 395
G +H V++ + D V SAL+DMY KCGL ++ LF I N ++N+L+
Sbjct: 324 SVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILG 383
Query: 396 FAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMP 455
HG A E F E+++ GL P+ +TF LL C H+G++ G F M +G+ P
Sbjct: 384 LGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEP 443
Query: 456 REEHYNCIIDLLGRAGKLKEVEDFINSM--PFEPTAFGWCSFLGACKTHGDKERAKLAAY 513
+ EHY ++ L+G AGKL+E +F+ S+ P + G + L C+ H + A++ A
Sbjct: 444 QTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILG--ALLSCCEVHENTHLAEVVAE 501
Query: 514 KLMKLEPENSGAH-VLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSW 562
+ K E + V+LSN+YA+ +W++V LR I + KLPG SW
Sbjct: 502 NIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 7 FRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGE 66
R K D VA ++ +CA+ + GK++H+ +IR G + + L+++YSKCG
Sbjct: 299 LRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGL 358
Query: 67 LDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQA 126
L A+ LF + ++N+VS+ ++I G A + F ++ G + S++L
Sbjct: 359 LKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCT 418
Query: 127 CASLGSIQFGVQVHCLVVKSGFGCE 151
C G + G ++ +KS FG E
Sbjct: 419 CCHSGLLNKGQEIF-ERMKSEFGIE 442
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 151/550 (27%), Positives = 280/550 (50%), Gaps = 5/550 (0%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
++ C+ +G Q+H ++I G F+ + L+ LY+ +D A+KLFD M RN
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRN 177
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
+ ++ F ++ + + + +M EG + +++ C+ + G Q+H
Sbjct: 178 LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHS 237
Query: 142 LVVKSGFGCE-LFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFE 200
LVVKSG+ +F+ + L D YS CG++S + + F +P KD + W S++ G+
Sbjct: 238 LVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVL 297
Query: 201 KALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF-IGNAL 259
+L + KM S L+ C+ GK +H ++K GF+ + + +AL
Sbjct: 298 DSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSAL 357
Query: 260 TDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPN 319
D+Y K + +++ ++QS C N+ +++ + + + F + + G +
Sbjct: 358 IDMYGKCNGIENSALLYQSLP-CLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGID 416
Query: 320 EFTFSSLIKACANQ--AKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQL 377
E T S+++KA + L +L+H +K + D VS +L+D Y K G + S ++
Sbjct: 417 EVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKV 476
Query: 378 FDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMV 437
FDE++ PN +++ +A++G+G + ++ EM L P+ VT +++L GCSH+G+V
Sbjct: 477 FDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLV 536
Query: 438 EDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLG 497
E+G F S++ YG+ P + Y C++DLLGRAG +++ E + + W S L
Sbjct: 537 EEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQ 596
Query: 498 ACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKL 557
+C+ H ++ + AA LM LEPEN ++ +S Y + +E R +R++ + +
Sbjct: 597 SCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMRE 656
Query: 558 PGYSWVDIGN 567
GYS V + N
Sbjct: 657 IGYSSVVVKN 666
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 187/375 (49%), Gaps = 9/375 (2%)
Query: 63 KCGELDYAIKLFDRMSKRNMVSWTAMITGFFR---SLRFREALDTFCQMRAEGETASQFA 119
K G L A + FD MS R++V++ +I+G R SLR A++ + +M + G S
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLR---AIELYAEMVSCGLRESAST 114
Query: 120 LSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP 179
SVL C+ + G+QVHC V+ GFGC +F+ S L +Y+ V A K+F+EM
Sbjct: 115 FPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEML 174
Query: 180 CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKS 239
++ + ++ + + G ++ Y +M + V + C + C+ + GK
Sbjct: 175 DRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQ 234
Query: 240 LHAIIVKFGFEYET-FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEM 298
LH+++VK G+ F+ N L D YS GD+ + F + ++++S+ +IV +
Sbjct: 235 LHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPE-KDVISWNSIVSVCADY 293
Query: 299 DQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPF-V 357
+ +L+ F ++ G P+ F S + C+ + ++ G +H V+K FD V
Sbjct: 294 GSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHV 353
Query: 358 SSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGL 417
SAL+DMYGKC ++S L+ + N N+L+ G+ ++ IE F M+D G
Sbjct: 354 QSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGT 413
Query: 418 KPNAVTFVNLLKGCS 432
+ VT +LK S
Sbjct: 414 GIDEVTLSTVLKALS 428
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 143/319 (44%), Gaps = 37/319 (11%)
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR 312
+ N D KSG+++SA F S R++V++ ++ G +A+ + ++
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMS-VRDVVTYNLLISGNSRYGCSLRAIELYAEMV 104
Query: 313 NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
+ G+ + TF S++ C+++ G +H +V+ F + FV SALV +Y L D
Sbjct: 105 SCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVD 164
Query: 373 HSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
+++LFDE+ + N N L+ F Q G + E + M G+ N +T+ +++GCS
Sbjct: 165 VALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCS 224
Query: 433 HAGMVEDG-----------------------LNYFYSMDKIYGVM------PREE--HYN 461
H +V +G ++Y+ + + G M P ++ +N
Sbjct: 225 HDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWN 284
Query: 462 CIIDLLGRAGKLKEVEDFINSMPF---EPTAFGWCSFLGACKTHGDKERAKLAAYKLMKL 518
I+ + G + + D + M F P+ + SFL C + D + K ++K+
Sbjct: 285 SIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKM 344
Query: 519 EPENSGAHV--LLSNIYAK 535
+ S HV L ++Y K
Sbjct: 345 GFDVSSLHVQSALIDMYGK 363
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 130/413 (31%), Positives = 224/413 (54%), Gaps = 15/413 (3%)
Query: 186 WTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIV 245
W + GY + + +++ Y +M + ++ L AC + + G+ + ++
Sbjct: 81 WNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVL 140
Query: 246 KFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKAL 305
K GF+++ ++GN L LY A VF + RN+VS+ +I+ VE +L
Sbjct: 141 KHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTE-RNVVSWNSIMTALVENGKLNLVF 199
Query: 306 NAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMY 365
F ++ P+E T L+ AC L G L+H QV+ + + + +ALVDMY
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLSACGGNLSL--GKLVHSQVMVRELELNCRLGTALVDMY 257
Query: 366 GKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMV-DRGLKPNAVTF 424
K G +++ +F+ + + N W+ ++ AQ+G A++ F++M+ + ++PN VTF
Sbjct: 258 AKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTF 317
Query: 425 VNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMP 484
+ +L CSH G+V+DG YF+ M+KI+ + P HY ++D+LGRAG+L E DFI MP
Sbjct: 318 LGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMP 377
Query: 485 FEPTAFGWCSFLGACKTHGDKERAKLA---AYKLMKLEPENSGAHVLLSNIYAKERQWED 541
FEP A W + L AC H D++ + +L++LEP+ SG V+++N +A+ R W +
Sbjct: 378 FEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAE 437
Query: 542 VRCLRKMIRDGNMKKLPGYSWVDIGNETHVF--GVEDWSHPRKK--EIYEKLD 590
+R+++++ MKK+ G S +++G H F G + PR + IYE LD
Sbjct: 438 AAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYD----PRSEYVSIYELLD 486
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 184/383 (48%), Gaps = 11/383 (2%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNL--YSKCGELDYAIKLFDRMSK 79
++ C+ K L Q+H Q+ +F+ + L+ + S +L +A L S
Sbjct: 19 FLKLCSSIKHL---LQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSD 75
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQV 139
+W + G+ S E++ + +M+ G ++ +L+ACAS + G Q+
Sbjct: 76 STPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQI 135
Query: 140 HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNF 199
V+K GF ++++G+NL +Y C + SDA KVF+EM ++ V W S++ V+NG
Sbjct: 136 QVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKL 195
Query: 200 EKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNAL 259
+ +M+ D+ + LSAC S GK +H+ ++ E +G AL
Sbjct: 196 NLVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTAL 253
Query: 260 TDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID-LRNSGIEP 318
D+Y+KSG + A VF+ +N+ +++A++ G + E+AL F ++ S + P
Sbjct: 254 VDMYAKSGGLEYARLVFERMVD-KNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRP 312
Query: 319 NEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS-SALVDMYGKCGLFDHSIQL 377
N TF ++ AC++ ++ G ++ K + + + A+VD+ G+ G + +
Sbjct: 313 NYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDF 372
Query: 378 FDEIE-NPNDTAWNTLVGVFAQH 399
++ P+ W TL+ + H
Sbjct: 373 IKKMPFEPDAVVWRTLLSACSIH 395
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 158/541 (29%), Positives = 269/541 (49%), Gaps = 50/541 (9%)
Query: 51 TFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRA 110
+F N +++ Y+K + A+ LF++M +RN VSW+AMITGF ++ A+ F +M
Sbjct: 136 SFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPV 195
Query: 111 EGET------ASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSK 164
+ + A + +A LG Q+G V SG ++ + L Y +
Sbjct: 196 KDSSPLCALVAGLIKNERLSEAAWVLG--QYGSLV------SGREDLVYAYNTLIVGYGQ 247
Query: 165 CGEVSDACKVFEEMP---------------CKDEVLWTSMIDGYVKNGNFEKALIAYKKM 209
G+V A +F+++P CK+ V W SMI Y+K G+ A + + +M
Sbjct: 248 RGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQM 307
Query: 210 -----VTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYS 264
++ N ID +V S + AL + + H+ N + Y+
Sbjct: 308 KDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHS-------------WNMMVSGYA 354
Query: 265 KSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFS 324
G++ A + F+ + ++ VS+ +I+ Y + ++A++ FI + G +P+ T +
Sbjct: 355 SVGNVELARHYFEK-TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLT 413
Query: 325 SLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENP 384
SL+ A L G +H VVK P V +AL+ MY +CG S ++FDE++
Sbjct: 414 SLLSASTGLVNLRLGMQMHQIVVKTVIPDVP-VHNALITMYSRCGEIMESRRIFDEMKLK 472
Query: 385 NDT-AWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNY 443
+ WN ++G +A HG A+ F M G+ P+ +TFV++L C+HAG+V++
Sbjct: 473 REVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQ 532
Query: 444 FYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHG 503
F SM +Y + P+ EHY+ ++++ G+ +E I SMPFEP W + L AC+ +
Sbjct: 533 FVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYN 592
Query: 504 DKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWV 563
+ A +AA + +LEPE+S +VLL N+YA W++ +R + +KK G SWV
Sbjct: 593 NVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 652
Query: 564 D 564
D
Sbjct: 653 D 653
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/474 (20%), Positives = 208/474 (43%), Gaps = 41/474 (8%)
Query: 54 TNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGE 113
TN LN + G + A +F+++ RN V+W MI+G+ + +A F M
Sbjct: 43 TNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM----P 98
Query: 114 TASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACK 173
++++ S G I+F + L + + F + + Y+K + +A
Sbjct: 99 KRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMP-SRDSFSWNTMISGYAKNRRIGEALL 157
Query: 174 VFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACT---- 229
+FE+MP ++ V W++MI G+ +NG + A++ ++KM D LC+ ++
Sbjct: 158 LFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVK----DSSPLCALVAGLIKNER 213
Query: 230 -ALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS-------DSG 281
+ A+ G+ + +V G E + N L Y + G + +A +F D G
Sbjct: 214 LSEAAWVLGQ--YGSLVS-GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHG 270
Query: 282 -------CRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQA 334
C+N+VS+ +++ Y+++ + A F +++ + +++++I + +
Sbjct: 271 GEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVS 326
Query: 335 KLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVG 394
++E L ++ +RD + +V Y G + + F++ + +WN+++
Sbjct: 327 RMEDAFALFSEMP----NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIA 382
Query: 395 VFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVM 454
+ ++ + A++ F M G KP+ T +LL + G+V L + V+
Sbjct: 383 AYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST--GLVNLRLGMQMHQIVVKTVI 440
Query: 455 PREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERA 508
P +N +I + R G++ E + M + W + +G HG+ A
Sbjct: 441 PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEA 494
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 4/198 (2%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + L+ L G Q+H Q++ +P + N L+ +YS+CGE+ + ++F
Sbjct: 408 DPHTLTSLLSASTGLVNLRLGMQMH-QIVVKTVIPDVPVHNALITMYSRCGEIMESRRIF 466
Query: 75 DRMS-KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSI 133
D M KR +++W AMI G+ EAL+ F M++ G S SVL ACA G +
Sbjct: 467 DEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLV 526
Query: 134 -QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSMID 191
+ Q ++ ++ S+L ++ S G+ +A + MP + D+ +W +++D
Sbjct: 527 DEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLD 586
Query: 192 GYVKNGNFEKALIAYKKM 209
N A +A + M
Sbjct: 587 ACRIYNNVGLAHVAAEAM 604
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/459 (30%), Positives = 231/459 (50%), Gaps = 40/459 (8%)
Query: 184 VLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFS--FGKSLH 241
V WTS I+ +NG +A + M V + + LS C + S G LH
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 242 AIIVKFGFEY-ETFIGNALTDLYSKSGDMVSASNVF----------------------QS 278
K G + +G A+ +YSK G A VF Q
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 279 DSGC--------RNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKAC 330
D+ R+++S+TA+++G+V+ E+AL F +++ SG++P+ + + AC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 331 ANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWN 390
N L G +H V+ +F + VS++L+D+Y +CG + + Q+F +E +WN
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
Query: 391 TLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKI 450
+++ FA +G ++ F +M ++G KP+AVTF L CSH G+VE+GL YF M
Sbjct: 277 SVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCD 336
Query: 451 YGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKL 510
Y + PR EHY C++DL RAG+L++ + SMP +P S L AC HG+ +
Sbjct: 337 YRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNN---IV 393
Query: 511 AAYKLMK----LEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIG 566
A +LMK L ++ +V+LSN+YA + +WE +R+ ++ +KK PG+S ++I
Sbjct: 394 LAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEID 453
Query: 567 NETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQT 605
+ HVF D +H I E L+ + +++ G V +T
Sbjct: 454 DCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 175/392 (44%), Gaps = 41/392 (10%)
Query: 46 GCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTF 105
G LP +T+ L + + I+ ++ + VSWT+ I R+ R EA F
Sbjct: 2 GLLPVVGITSPALITHKN--HANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEF 59
Query: 106 CQMRAEGETASQFALSSVLQACASL--GSIQFGVQVHCLVVKSGFG-CELFLGSNLTDMY 162
M G + ++L C GS G +H K G + +G+ + MY
Sbjct: 60 SDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMY 119
Query: 163 SKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNF----------------------- 199
SK G A VF+ M K+ V W +MIDGY+++G
Sbjct: 120 SKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMIN 179
Query: 200 --------EKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEY 251
E+AL+ +++M V D + + L+ACT L A SFG +H ++ F+
Sbjct: 180 GFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKN 239
Query: 252 ETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL 311
+ N+L DLY + G + A VF + R +VS+ +++ G+ ++L F +
Sbjct: 240 NVRVSNSLIDLYCRCGCVEFARQVFYNMEK-RTVVSWNSVIVGFAANGNAHESLVYFRKM 298
Query: 312 RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS--SALVDMYGKCG 369
+ G +P+ TF+ + AC++ +E G L + Q++K ++ P + LVD+Y + G
Sbjct: 299 QEKGFKPDAVTFTGALTACSHVGLVEEG-LRYFQIMKCDYRISPRIEHYGCLVDLYSRAG 357
Query: 370 LFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHG 400
+ +++L + PN+ +L+ + HG
Sbjct: 358 RLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 18/194 (9%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D A+ + C LS G +H ++ ++N L++LY +CG +++A ++F
Sbjct: 205 DYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 264
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
M KR +VSW ++I GF + E+L F +M+ +G + L AC+ +G ++
Sbjct: 265 YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVE 324
Query: 135 FGVQVHCLVVK---------SGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-DEV 184
G++ + ++K +GC L D+YS+ G + DA K+ + MP K +EV
Sbjct: 325 EGLR-YFQIMKCDYRISPRIEHYGC-------LVDLYSRAGRLEDALKLVQSMPMKPNEV 376
Query: 185 LWTSMIDGYVKNGN 198
+ S++ +GN
Sbjct: 377 VIGSLLAACSNHGN 390
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 156/568 (27%), Positives = 281/568 (49%), Gaps = 44/568 (7%)
Query: 32 LSKGKQLHAQLI--RGGCLPCTFL--TNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTA 87
L + KQ+HAQL+ R L + T H +S+ + Y ++ + + SW
Sbjct: 16 LEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSR-NIVTYVKRILKGFNGHDSFSWGC 74
Query: 88 MITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSG 147
++ + +F+E +D + M G S A++SVL+AC + ++ G +H +K+G
Sbjct: 75 LVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNG 134
Query: 148 F-GCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAY 206
GC +++ + L +YS+ G + A K F+++ K+ V W S++ GY+++G ++A +
Sbjct: 135 LCGC-VYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVF 193
Query: 207 KKM-----VTDNVFIDQHV-------LCSTLSACTALKAFSFG----------------K 238
K+ V+ N+ I + CS SA S+
Sbjct: 194 DKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLART 253
Query: 239 SLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEM 298
A+ K G + T I Y+K GD+ SA +F+ S +V + A++ Y +
Sbjct: 254 YFDAMPQKNGVSWITMISG-----YTKLGDVQSAEELFRLMSKKDKLV-YDAMIACYTQN 307
Query: 299 DQLEKALNAFIDL--RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPF 356
+ + AL F + RNS I+P+E T SS++ A + G+ + + + D
Sbjct: 308 GKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDL 367
Query: 357 VSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRG 416
+S++L+D+Y K G F + ++F + + +++ ++ +G+ A F M+++
Sbjct: 368 LSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKK 427
Query: 417 LKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEV 476
+ PN VTF LL SH+G+V++G F SM K + + P +HY ++D+LGRAG+L+E
Sbjct: 428 IPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEA 486
Query: 477 EDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKE 536
+ I SMP +P A W + L A H + E ++A +KLE + +G L+ IY+
Sbjct: 487 YELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSV 546
Query: 537 RQWEDVRCLRKMIRDGNMKKLPGYSWVD 564
+W+D R +R I++ + K G SWV+
Sbjct: 547 GRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 190/404 (47%), Gaps = 27/404 (6%)
Query: 16 SKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFD 75
S AV +++ C + + + GK +HAQ ++ G C ++ L+ LYS+ G ++ A K FD
Sbjct: 104 SHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFD 163
Query: 76 RMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQ------ACAS 129
++++N VSW +++ G+ S EA F ++ + + +SS + AC+
Sbjct: 164 DIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSL 223
Query: 130 LGSIQFGVQVHCLVVKSGF-GC-ELFLGSNLTDM---------------YSKCGEVSDAC 172
++ ++ G+ C E+ L D Y+K G+V A
Sbjct: 224 FSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAE 283
Query: 173 KVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFI--DQHVLCSTLSACTA 230
++F M KD++++ +MI Y +NG + AL + +M+ N +I D+ L S +SA +
Sbjct: 284 ELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQ 343
Query: 231 LKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTA 290
L SFG + + I + G + + + +L DLY K GD A +F S+ ++ VS++A
Sbjct: 344 LGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMF-SNLNKKDTVSYSA 402
Query: 291 IVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFN 350
++ G +A + F + I PN TF+ L+ A ++ ++ G + N
Sbjct: 403 MIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHN 462
Query: 351 FDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLV 393
+ +VDM G+ G + + +L + PN W L+
Sbjct: 463 LEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALL 506
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/524 (28%), Positives = 256/524 (48%), Gaps = 40/524 (7%)
Query: 104 TFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYS 163
T M + G + L + C+++ ++ Q+H ++K+G + S +
Sbjct: 12 TVPAMPSSGSLSGNTYLRLIDTQCSTMRELK---QIHASLIKTGLISDTVTASRVLAFC- 67
Query: 164 KCGEVSD---ACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHV 220
C SD A VF + K+ +W ++I G+ ++ E A+ + M+ + +
Sbjct: 68 -CASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR 126
Query: 221 LC--STLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS 278
L S A L G+ LH +++K G E ++FI N + +Y G ++ A +F
Sbjct: 127 LTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLG 186
Query: 279 DSG---------------C---------------RNIVSFTAIVDGYVEMDQLEKALNAF 308
G C RN VS+ +++ G+V + + AL+ F
Sbjct: 187 MIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMF 246
Query: 309 IDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKC 368
+++ ++P+ FT SL+ ACA E G +H +V+ F+ + V +AL+DMY KC
Sbjct: 247 REMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKC 306
Query: 369 GLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLL 428
G + + +F+ + WN+++ A +G A++ F+E+ GL+P++V+F+ +L
Sbjct: 307 GCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVL 366
Query: 429 KGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPT 488
C+H+G V +F M + Y + P +HY ++++LG AG L+E E I +MP E
Sbjct: 367 TACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEED 426
Query: 489 AFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKM 548
W S L AC+ G+ E AK AA L KL+P+ + +VLLSN YA +E+ R +
Sbjct: 427 TVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLL 486
Query: 549 IRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSL 592
+++ M+K G S +++ E H F +HP+ EIY LD L
Sbjct: 487 MKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDIL 530
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 197/411 (47%), Gaps = 43/411 (10%)
Query: 21 QLIQT-CAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLY-SKCGELDYAIKLFDRMS 78
+LI T C+ +EL KQ+HA LI+ G + T + +L + +++YA +F R++
Sbjct: 29 RLIDTQCSTMREL---KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRIN 85
Query: 79 KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETA--SQFALSSVLQACASLGSIQFG 136
+N W +I GF RS A+ F M + + SV +A LG + G
Sbjct: 86 HKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDG 145
Query: 137 VQVHCLVVKSGFGCELFLGSNLTDMY-------------------------------SKC 165
Q+H +V+K G + F+ + + MY +KC
Sbjct: 146 RQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKC 205
Query: 166 GEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTL 225
G + A +F+EMP ++ V W SMI G+V+NG F+ AL +++M +V D + S L
Sbjct: 206 GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLL 265
Query: 226 SACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNI 285
+AC L A G+ +H IV+ FE + + AL D+Y K G + NVF+ + +
Sbjct: 266 NACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPK-KQL 324
Query: 286 VSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQ 345
+ +++ G E+A++ F +L SG+EP+ +F ++ ACA+ ++ +
Sbjct: 325 SCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFF-R 383
Query: 346 VVKFNFDRDPFVS--SALVDMYGKCGLFDHSIQLFDEIENPNDTA-WNTLV 393
++K + +P + + +V++ G GL + + L + DT W++L+
Sbjct: 384 LMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLL 434
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 4/196 (2%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + L+ CA +G+ +H ++R + + L+++Y KCG ++ + +F
Sbjct: 257 DGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF 316
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ K+ + W +MI G + A+D F ++ G + VL ACA G +
Sbjct: 317 ECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVH 376
Query: 135 FGVQVHCLVVKSGFGCELFLG--SNLTDMYSKCGEVSDACKVFEEMPC-KDEVLWTSMID 191
+ L +K + E + + + ++ G + +A + + MP +D V+W+S++
Sbjct: 377 RADEFFRL-MKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLS 435
Query: 192 GYVKNGNFEKALIAYK 207
K GN E A A K
Sbjct: 436 ACRKIGNVEMAKRAAK 451
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 202/384 (52%), Gaps = 29/384 (7%)
Query: 309 IDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKC 368
I+L + G P+ F L ++CAN LEH +H ++ F DP +++ ++ M+G+C
Sbjct: 225 IELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGEC 284
Query: 369 GLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLL 428
+ ++FD + + + +W+ ++ ++ +G+G +A+ F EM GLKPN TF+ +
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 429 KGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPT 488
C+ G +E+ +F SM +G+ P+ EHY ++ +LG+ G L E E +I +PFEPT
Sbjct: 345 LACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 489 AFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKM 548
A W + + HGD + ++ ++P + +++ I K
Sbjct: 405 ADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKA----VINKIPTPP---------PKS 451
Query: 549 IRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESV 608
++ NM + +++ + R Y+ + K V YVP T V
Sbjct: 452 FKETNM----------VTSKSRILEF------RNLTFYKDEAKEMAAKKGVVYVPDTRFV 495
Query: 609 LIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTER 668
L ++D KE+ L HSER+A+AY ++ +P K + + KNLRVC DCH+ K +SK+ R
Sbjct: 496 LHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGR 555
Query: 669 NIIVRDISRFHHFSNGSCSCGDYW 692
+IVRD RFHHF +G CSCGDYW
Sbjct: 556 VLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 1 MASRNLFRFRHKLCDSKAVAQ------LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLT 54
+ R L++ +L D A+ L ++CA K L K++H ++ L
Sbjct: 215 LCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLN 274
Query: 55 NHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET 114
N +++++ +C + A ++FD M ++M SW M+ + + +AL F +M G
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLK 334
Query: 115 ASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFG----CELFLGSNLTDMYSKCGEVSD 170
++ +V ACA++G I+ +H +K+ G E +LG + + KCG + +
Sbjct: 335 PNEETFLTVFLACATVGGIEEAF-LHFDSMKNEHGISPKTEHYLG--VLGVLGKCGHLVE 391
Query: 171 ACKVFEEMPCKDEV-LWTSM 189
A + ++P + W +M
Sbjct: 392 AEQYIRDLPFEPTADFWEAM 411
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 56/109 (51%)
Query: 123 VLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKD 182
+ ++CA+L S++ +VH ++S F + L + + M+ +C ++DA +VF+ M KD
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKD 301
Query: 183 EVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTAL 231
W M+ Y NG + AL +++M + ++ + AC +
Sbjct: 302 MDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATV 350
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 207/417 (49%), Gaps = 35/417 (8%)
Query: 180 CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVF-IDQHVLCSTLSACTALKAFSFGK 238
C + T + Y GN E+AL + +M + +D HV L +C A G
Sbjct: 9 CTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGG 68
Query: 239 SLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVE- 297
S+HA VK F F+G AL D+Y K + A +F + RN V + A++ Y
Sbjct: 69 SVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFD-EIPQRNAVVWNAMISHYTHC 127
Query: 298 ------------MDQL--EKALNAFI-------DLRNSGIE-----------PNEFTFSS 325
MD + E + NA I D IE PN T +
Sbjct: 128 GKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLA 187
Query: 326 LIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPN 385
L+ AC+ +H + + P + S LV+ YG+CG + +FD +E+ +
Sbjct: 188 LVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 386 DTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFY 445
AW++L+ +A HG +A++TF EM + P+ + F+N+LK CSHAG+ ++ L YF
Sbjct: 248 VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFK 307
Query: 446 SMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDK 505
M YG+ ++HY+C++D+L R G+ +E I +MP +PTA W + LGAC+ +G+
Sbjct: 308 RMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEI 367
Query: 506 ERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSW 562
E A++AA +L+ +EPEN +VLL IY + E+ LR +++ +K PG SW
Sbjct: 368 ELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 166/364 (45%), Gaps = 55/364 (15%)
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFAL-------SSVLQACASLGSIQ 134
++S T ++ + +AL+ F QM S FAL S L++CA+
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMH------SSFALPLDAHVFSLALKSCAAAFRPV 65
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G VH VKS F F+G L DMY KC VS A K+F+E+P ++ V+W +MI Y
Sbjct: 66 LGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYT 125
Query: 195 KNGNFE---------------------------------KALIAYKKMVTDNVFIDQHVL 221
G + +A+ Y+KM+ + L
Sbjct: 126 HCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITL 185
Query: 222 CSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSG 281
+ +SAC+A+ AF K +H+ + E + + L + Y + G +V VF S
Sbjct: 186 LALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMED 245
Query: 282 CRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSL 341
R++V++++++ Y E AL F ++ + + P++ F +++KAC++ A L +L
Sbjct: 246 -RDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSH-AGLADEAL 303
Query: 342 LHGQVVKFNF----DRDPFVSSALVDMYGKCGLFDHSIQLFDEI-ENPNDTAWNTLVGVF 396
++ + ++ ++ +D + S LVD+ + G F+ + ++ + E P W L+G
Sbjct: 304 VYFKRMQGDYGLRASKDHY--SCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGAC 361
Query: 397 AQHG 400
+G
Sbjct: 362 RNYG 365
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 46/283 (16%)
Query: 280 SGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEP-NEFTFSSLIKACANQAKLEH 338
S C ++S T + Y E+ALN F+ + +S P + FS +K+CA +
Sbjct: 7 SSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVL 66
Query: 339 GSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQ 398
G +H VK NF +PFV AL+DMYGKC H+ +LFDEI N WN ++ +
Sbjct: 67 GGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTH 126
Query: 399 HGLGRNAIE------------TFN---------------------EMVDRGLKPNAVTFV 425
G + A+E +FN +M++ KPN +T +
Sbjct: 127 CGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLL 186
Query: 426 NLLKGCSHAG---MVEDGLNY-FYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFIN 481
L+ CS G ++++ +Y F ++ + P + + +++ GR G + V+ +
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNL-----IEPHPQLKSGLVEAYGRCGSIVYVQLVFD 241
Query: 482 SMPFEPTAFGWCSFLGACKTHGDKERA--KLAAYKLMKLEPEN 522
SM + W S + A HGD E A +L K+ P++
Sbjct: 242 SME-DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDD 283
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 128/301 (42%), Gaps = 40/301 (13%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ + +++CA A G +HA ++ L F+ LL++Y KC + +A KLF
Sbjct: 47 DAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLF 106
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETAS------------------ 116
D + +RN V W AMI+ + + +EA++ + M +S
Sbjct: 107 DEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRA 166
Query: 117 ---------------QFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDM 161
L +++ AC+++G+ + ++H ++ L S L +
Sbjct: 167 IEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEA 226
Query: 162 YSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVL 221
Y +CG + VF+ M +D V W+S+I Y +G+ E AL +++M V D
Sbjct: 227 YGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAF 286
Query: 222 CSTLSACT----ALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQ 277
+ L AC+ A +A + K + +G + L D+ S+ G A V Q
Sbjct: 287 LNVLKACSHAGLADEALVYFKRMQG---DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQ 343
Query: 278 S 278
+
Sbjct: 344 A 344
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 7/207 (3%)
Query: 7 FRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGE 66
FRF+ L + L+ C+ K++H+ R P L + L+ Y +CG
Sbjct: 176 FRFKPNLI---TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGS 232
Query: 67 LDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQA 126
+ Y +FD M R++V+W+++I+ + AL TF +M T A +VL+A
Sbjct: 233 IVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKA 292
Query: 127 CASLGSIQFGVQVHCLVVKSGFGCELFLG--SNLTDMYSKCGEVSDACKVFEEMPCKDEV 184
C+ G + V+ ++ +G S L D+ S+ G +A KV + MP K
Sbjct: 293 CSHAGLADEAL-VYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTA 351
Query: 185 -LWTSMIDGYVKNGNFEKALIAYKKMV 210
W +++ G E A IA ++++
Sbjct: 352 KTWGALLGACRNYGEIELAEIAARELL 378
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 219 bits (557), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 229/447 (51%), Gaps = 39/447 (8%)
Query: 155 GSNL--TDMYSKCGEVSD---ACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKM 209
GSNL S CG +S+ A +VF + + +++ +MI Y G ++L + M
Sbjct: 34 GSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSM 93
Query: 210 VTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDM 269
+ ++ D++ L +C++L FGK +H +++ GF I + +LY+ G M
Sbjct: 94 KSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRM 153
Query: 270 VSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEK-------------------------- 303
A VF S RN+V + ++ G+ + +E+
Sbjct: 154 GDAQKVFDEMSE-RNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKC 212
Query: 304 -----ALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPF-V 357
AL F ++ + G +P+E T +++ A+ L+ G +H +D V
Sbjct: 213 GRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITV 272
Query: 358 SSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRG- 416
+ALVD Y K G + + +F +++ N +WNTL+ A +G G I+ F+ M++ G
Sbjct: 273 GNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGK 332
Query: 417 LKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEV 476
+ PN TF+ +L CS+ G VE G F M + + + R EHY ++DL+ R+G++ E
Sbjct: 333 VAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEA 392
Query: 477 EDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKE 536
F+ +MP A W S L AC++HGD + A++AA +L+K+EP NSG +VLLSN+YA+E
Sbjct: 393 FKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEE 452
Query: 537 RQWEDVRCLRKMIRDGNMKKLPGYSWV 563
+W+DV +R +++ ++K G S +
Sbjct: 453 GRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 188/401 (46%), Gaps = 40/401 (9%)
Query: 37 QLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSL 96
++HA L+R L H +++ DYA ++F + N++ + AMI +
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG 81
Query: 97 RFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGS 156
E+L F M++ G A ++ + +L++C+SL ++FG VH ++++GF +
Sbjct: 82 PPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRI 141
Query: 157 NLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFI 216
+ ++Y+ G + DA KVF+EM ++ V+W MI G+ +G+ E+ L +K+M ++ +
Sbjct: 142 GVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQM-SERSIV 200
Query: 217 DQHVLCSTLSAC--------------------------------TALKAFSFGKSLHAII 244
+ + S+LS C +L GK +H+
Sbjct: 201 SWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTA 260
Query: 245 VKFGFEYETFI--GNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLE 302
G ++ FI GNAL D Y KSGD+ +A+ +F+ RN+VS+ ++ G + E
Sbjct: 261 ESSGL-FKDFITVGNALVDFYCKSGDLEAATAIFRKMQR-RNVVSWNTLISGSAVNGKGE 318
Query: 303 KALNAFIDLRNSG-IEPNEFTFSSLIKACANQAKLEHGSLLHGQVV-KFNFDRDPFVSSA 360
++ F + G + PNE TF ++ C+ ++E G L G ++ +F + A
Sbjct: 319 FGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGA 378
Query: 361 LVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHG 400
+VD+ + G + + + N N W +L+ HG
Sbjct: 379 MVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 139/306 (45%), Gaps = 40/306 (13%)
Query: 1 MASRNLFRFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNL 60
M SR ++ D A L+++C+ +L GK +H +LIR G + ++ L
Sbjct: 93 MKSRGIW------ADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVEL 146
Query: 61 YSKCGELDYAIKLFDRMSKRNMVSWTAMITGF------------FRSL------------ 96
Y+ G + A K+FD MS+RN+V W MI GF F+ +
Sbjct: 147 YTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMI 206
Query: 97 -------RFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSG-F 148
R REAL+ FC+M +G + + +VL ASLG + G +H SG F
Sbjct: 207 SSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLF 266
Query: 149 GCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKK 208
+ +G+ L D Y K G++ A +F +M ++ V W ++I G NG E + +
Sbjct: 267 KDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDA 326
Query: 209 MVTDN-VFIDQHVLCSTLSACTALKAFSFGKSLHAIIV-KFGFEYETFIGNALTDLYSKS 266
M+ + V ++ L+ C+ G+ L +++ +F E T A+ DL S+S
Sbjct: 327 MIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRS 386
Query: 267 GDMVSA 272
G + A
Sbjct: 387 GRITEA 392
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 237/484 (48%), Gaps = 61/484 (12%)
Query: 123 VLQACA-SLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK 181
+L+ACA + + G +H +K G ++ +GS+L MY KCG V A KVF+EMP +
Sbjct: 51 ILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER 110
Query: 182 DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFG---- 237
+ W +MI GY+ NG+ ++ +F + V +T++ +K +
Sbjct: 111 NVATWNAMIGGYMSNGD---------AVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIE 161
Query: 238 -------------KSLHAIIVKFGF------------------EYETFIGNALTDLYSKS 266
K++ A V G E F+ + + Y +
Sbjct: 162 KARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRI 221
Query: 267 GDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSL 326
GD+ A +F R++V + ++ GY + + A++AF +++ G EP+ T SS+
Sbjct: 222 GDVHEARAIFYR-VFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSI 280
Query: 327 IKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPND 386
+ ACA +L+ G +H + + + FVS+AL+DMY KCG +++ +F+ I +
Sbjct: 281 LSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSV 340
Query: 387 TAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYS 446
N+++ A HG G+ A+E F+ M LKP+ +TF+ +L C H G + +GL F
Sbjct: 341 ACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSE 400
Query: 447 MDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKE 506
M K V P +H+ C+I LLGR+GKLKE + M +P + LGACK H D E
Sbjct: 401 M-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTE 459
Query: 507 RAKLAAYKLMKLEPENSGA--------HVL-LSNIYAKERQWEDVRCLRKMIRDGNMKKL 557
A+ ++MK+ E +G+ H+ +SN+YA +W+ LR + ++K
Sbjct: 460 MAE----QVMKI-IETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKS 514
Query: 558 PGYS 561
PG S
Sbjct: 515 PGLS 518
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 196/418 (46%), Gaps = 47/418 (11%)
Query: 19 VAQLIQTCA-QAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM 77
V +++ CA + GK LH++ I+ G + + L+++Y KCG + A K+FD M
Sbjct: 48 VPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEM 107
Query: 78 SKRNMVSWTAMI------------TGFFRSLRFREALDTFCQM------RAEGETASQ-- 117
+RN+ +W AMI +G F + T+ +M R E E A +
Sbjct: 108 PERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELF 167
Query: 118 ----FALSSVLQACASLGSIQFGVQVHCLVVKSG--FGCEL-----FLGSNLTDMYSKCG 166
F L +V S+ GV V+ ++ F ++ F+ S + Y + G
Sbjct: 168 ERMPFELKNV-----KAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIG 222
Query: 167 EVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLS 226
+V +A +F + +D V+W ++I GY +NG + A+ A+ M + D + S LS
Sbjct: 223 DVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILS 282
Query: 227 ACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIV 286
AC G+ +H++I G E F+ NAL D+Y+K GD+ +A++VF+S S R++
Sbjct: 283 ACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESIS-VRSVA 341
Query: 287 SFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHG----SLL 342
+++ + ++AL F + + ++P+E TF +++ AC + L G S +
Sbjct: 342 CCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM 401
Query: 343 HGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQH 399
Q VK N L+ + G+ G + +L E+ PNDT L+G H
Sbjct: 402 KTQDVKPNVKH----FGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVH 455
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 92/180 (51%), Gaps = 16/180 (8%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ V+ ++ CAQ+ L G+++H+ + G F++N L+++Y+KCG+L+ A +F
Sbjct: 273 DAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVF 332
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ +S R++ +MI+ + +EAL+ F M + + +VL AC G +
Sbjct: 333 ESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLM 392
Query: 135 FGVQVHCLV----VKSG---FGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK--DEVL 185
G+++ + VK FGC L + + G++ +A ++ +EM K D VL
Sbjct: 393 EGLKIFSEMKTQDVKPNVKHFGC-------LIHLLGRSGKLKEAYRLVKEMHVKPNDTVL 445
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 211/416 (50%), Gaps = 35/416 (8%)
Query: 181 KDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSL 240
K + ++ ++I Y+ G ++ +L + M+ +V + S + A + + S+G +L
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 241 HAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS-------------DSGCRN--- 284
H +K GF ++ F+ + Y + GD+ S+ +F D+ RN
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 285 --------------IVSFTAIVDGYVEMDQLEKALNAF---IDLRNSGIEPNEFTFSSLI 327
+VS+T +++G+ + KAL F I + I PNE TF S++
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 328 KACAN--QAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPN 385
+CAN Q + G +HG V+ + +AL+DMYGK G + ++ +FD+I +
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKK 288
Query: 386 DTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFY 445
AWN ++ A +G + A+E F M + PN +T + +L C+ + +V+ G+ F
Sbjct: 289 VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFS 348
Query: 446 SMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDK 505
S+ Y ++P EHY C++DL+GRAG L + +FI S+PFEP A + LGACK H +
Sbjct: 349 SICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENT 408
Query: 506 ERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYS 561
E +L+ L+P++ G +V LS A + W + +RK + + ++K+P YS
Sbjct: 409 ELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 115/239 (48%), Gaps = 12/239 (5%)
Query: 49 PCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQM 108
PC N LL+ + GE+DYA + F RM ++VSWT +I GF + +AL F +M
Sbjct: 150 PCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEM 209
Query: 109 RAEGE---TASQFALSSVLQACASL--GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYS 163
T ++ SVL +CA+ G I+ G Q+H V+ LG+ L DMY
Sbjct: 210 IQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYG 269
Query: 164 KCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCS 223
K G++ A +F+++ K W ++I NG ++AL ++ M + V + L +
Sbjct: 270 KAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLA 329
Query: 224 TLSACTALKAFSFGKSLHAIIVKFGFEYETFIGN----ALTDLYSKSGDMVSASNVFQS 278
L+AC K G L + I EY+ + + DL ++G +V A+N QS
Sbjct: 330 ILTACARSKLVDLGIQLFSSICS---EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQS 385
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 150/353 (42%), Gaps = 39/353 (11%)
Query: 85 WTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVV 144
+ +I + + ++ +L F M A + S+++A S S+ +GV +H +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 145 KSGFGCELFLGSNLTDMYSKCGEVS---------------------DAC----------K 173
K GF + F+ ++ Y + G++ DAC +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 174 VFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDN---VFIDQHVLCSTLSACTA 230
F+ MP D V WT++I+G+ K G KAL+ + +M+ + + ++ S LS+C
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 231 LK--AFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSF 288
GK +H ++ T +G AL D+Y K+GD+ A +F + + ++
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRD-KKVCAW 292
Query: 289 TAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVV- 347
AI+ + ++AL F +++S + PN T +++ ACA ++ G L +
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 348 KFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQH 399
++ +VD+ G+ GL + + P+ + L+G H
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIH 405
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 15/153 (9%)
Query: 35 GKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFR 94
GKQ+H ++ + T L LL++Y K G+L+ A+ +FD++ + + +W A+I+
Sbjct: 242 GKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALAS 301
Query: 95 SLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQV--------HCLVVKS 146
+ R ++AL+ F M++ + L ++L ACA + G+Q+ +
Sbjct: 302 NGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSE 361
Query: 147 GFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP 179
+GC + D+ + G + DA + +P
Sbjct: 362 HYGC-------VVDLIGRAGLLVDAANFIQSLP 387
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 209/385 (54%), Gaps = 13/385 (3%)
Query: 193 YVKNGNFEKALIAYK-KMVTDNVFIDQHVLCSTLSACTALKAFSF-GKSLHAIIVKFGFE 250
Y+++G KAL+ ++ + F+D + + +A KA S G+ +HA++ K GF
Sbjct: 38 YLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFN 97
Query: 251 YETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID 310
I +L YS GD+ A VF +NIV +TA++ Y E + +A+ F
Sbjct: 98 AVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKR 157
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF--NFDRDPFVSSALVDMYGKC 368
+ IE + + + ACA+ ++ G ++ + +K D + ++L++MY K
Sbjct: 158 MEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKS 217
Query: 369 GLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEM------VDRGLKPNAV 422
G + + +LFDE + T + +++ +A +G + ++E F +M D + PN V
Sbjct: 218 GETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDV 277
Query: 423 TFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINS 482
TF+ +L CSH+G+VE+G +F SM Y + PRE H+ C++DL R+G LK+ +FIN
Sbjct: 278 TFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQ 337
Query: 483 MPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDV 542
MP +P W + LGAC HG+ E + ++ +L+ ++ G +V LSNIYA + W++
Sbjct: 338 MPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEK 397
Query: 543 RCLRKMIRDGNMKKLPGYSWVDIGN 567
+R +R +++PG SW+++G+
Sbjct: 398 SKMRDRVRK---RRMPGKSWIELGS 419
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 176/390 (45%), Gaps = 49/390 (12%)
Query: 4 RNLFRFRHKLCDSKAVAQLIQTCAQAKELS-KGKQLHAQLIRGGCLPCTFLTNHLLNLYS 62
R+ FR DS +V I+ + K S G+Q+HA + + G + L+ YS
Sbjct: 52 RHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYS 111
Query: 63 KCGELDYAIKLFDRM-SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALS 121
G++DYA ++FD K+N+V WTAMI+ + + EA++ F +M AE ++
Sbjct: 112 SVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVT 171
Query: 122 SVLQACASLGSIQFGVQVHCLVVKSG--FGCELFLGSNLTDMYSKCGEVSDACKVFEEMP 179
L ACA LG++Q G +++ +K +L L ++L +MY K GE A K+F+E
Sbjct: 172 VALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESM 231
Query: 180 CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVT-----DNVFIDQHV-LCSTLSACTALKA 233
KD +TSMI GY NG +++L +KKM T D V V L AC+
Sbjct: 232 RKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGL 291
Query: 234 FSFGKS-LHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIV 292
GK ++I+ + + + DL+ +SG + A
Sbjct: 292 VEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDA-------------------- 331
Query: 293 DGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFD 352
+ FI+ I+PN + +L+ AC+ +E G + ++ F D
Sbjct: 332 -------------HEFIN--QMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRI--FELD 374
Query: 353 RDPFVS-SALVDMYGKCGLFDHSIQLFDEI 381
RD AL ++Y G++D ++ D +
Sbjct: 375 RDHVGDYVALSNIYASKGMWDEKSKMRDRV 404
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 197/369 (53%), Gaps = 8/369 (2%)
Query: 225 LSACTALKAFSFGKSLHAIIVKFG-FEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCR 283
+ AC FS GK +H +VK G F + + + +Y + + A VF +
Sbjct: 123 IVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVF-DEIPQP 181
Query: 284 NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLH 343
++V + +++GYV + L F ++ GIEP+EF+ ++ + ACA L G +H
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIH 241
Query: 344 GQVVKFNF-DRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLG 402
V K + + D FV +ALVDMY KCG + ++++F+++ N +W L+G +A +G
Sbjct: 242 EFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYA 301
Query: 403 RNAIETFNEM-VDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYN 461
+ A + + + G+KP++V + +L C+H G +E+G +M+ YG+ P+ EHY+
Sbjct: 302 KKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYS 361
Query: 462 CIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEP- 520
CI+DL+ RAG+L + D I MP +P A W + L C+TH + E +LA L+ LE
Sbjct: 362 CIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKG 421
Query: 521 ---ENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDW 577
E A V LSNIY ++ + +R MI ++K PG+S +++ F D
Sbjct: 422 NVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDV 481
Query: 578 SHPRKKEIY 586
SHP +I+
Sbjct: 482 SHPNLLQIH 490
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 192/419 (45%), Gaps = 19/419 (4%)
Query: 24 QTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELD----YAIKLFDRMSK 79
Q C K++ K H+ I G T+ + LL + L+ YA +FD +
Sbjct: 19 QRCNTVKQI---KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEI 75
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGE---TASQFALSSVLQACASLGSIQFG 136
N + MI RS + L F M E E T S ++ AC G
Sbjct: 76 PNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVG 135
Query: 137 VQVHCLVVKSG-FGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVK 195
Q+HC VVK+G F + + + + +Y + + DA KVF+E+P D V W +++GYV+
Sbjct: 136 KQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 196 NGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF-EYETF 254
G + L +K+M+ + D+ + + L+AC + A + GK +H + K + E + F
Sbjct: 196 CGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVF 255
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL-RN 313
+G AL D+Y+K G + +A VF+ + RN+ S+ A++ GY +KA + R
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFEKLTR-RNVFSWAALIGGYAAYGYAKKATTCLDRIERE 314
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHG-SLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
GI+P+ ++ ACA+ LE G ++L ++ S +VD+ + G D
Sbjct: 315 DGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLD 374
Query: 373 HSIQLFDEIE-NPNDTAWNTLVGVFAQHG---LGRNAIETFNEMVDRGLKPNAVTFVNL 427
++ L +++ P + W L+ H LG A++ ++ ++ V L
Sbjct: 375 DALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQL 433
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 103/200 (51%), Gaps = 4/200 (2%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPC-TFLTNHLLNLYSKCGELDYAIKL 73
D +V + CAQ L++GK +H + + + F+ L+++Y+KCG ++ A+++
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 74 FDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQM-RAEGETASQFALSSVLQACASLGS 132
F+++++RN+ SW A+I G+ ++A ++ R +G L VL ACA G
Sbjct: 277 FEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGF 336
Query: 133 IQFG-VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKD-EVLWTSMI 190
++ G + + + G + S + D+ + G + DA + E+MP K +W +++
Sbjct: 337 LEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALL 396
Query: 191 DGYVKNGNFEKALIAYKKMV 210
+G + N E +A + ++
Sbjct: 397 NGCRTHKNVELGELAVQNLL 416
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 210/384 (54%), Gaps = 11/384 (2%)
Query: 225 LSACTALKAFSFGKSLHAIIVKFG-FEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCR 283
+ AC FS GK +H +VK G F ++ + + +Y + ++ A VF +
Sbjct: 123 IVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFD-EIPQP 181
Query: 284 NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLH 343
++V + +++GYV + L F ++ G+EP+EF+ ++ + ACA L G +H
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIH 241
Query: 344 GQVVKFNF-DRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLG 402
V K ++ + D FV +ALVDMY KCG + ++++F ++ N +W L+G +A +G
Sbjct: 242 EFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYA 301
Query: 403 RNAIETFNEMVDR--GLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHY 460
+ A+ T E ++R G+KP++V + +L C+H G +E+G + +M+ Y + P+ EHY
Sbjct: 302 KKAM-TCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHY 360
Query: 461 NCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEP 520
+CI+DL+ RAG+L + + I MP +P A W + L C+TH + E +LA L+ LE
Sbjct: 361 SCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEK 420
Query: 521 ----ENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVED 576
E A V LSNIY ++ + +R MI ++K PG+S +++ F D
Sbjct: 421 GNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGD 480
Query: 577 WSHPRKKEIYEKLDSL-LDQIKIV 599
SHP +I+ + L +D ++I+
Sbjct: 481 VSHPNLLQIHTVIHLLSVDALQIL 504
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 192/419 (45%), Gaps = 19/419 (4%)
Query: 24 QTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELD----YAIKLFDRMSK 79
Q C K++ K H+ I G T+ + LL + L+ YA +FD +
Sbjct: 19 QRCNTVKQI---KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEI 75
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGE---TASQFALSSVLQACASLGSIQFG 136
N + MI RS + L F M E E S ++ AC G
Sbjct: 76 PNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVG 135
Query: 137 VQVHCLVVKSG-FGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVK 195
Q+HC VVK+G F + + + + +Y + + DA KVF+E+P D V W +++GYV+
Sbjct: 136 KQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 196 NGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF-EYETF 254
G + L +++M+ + D+ + + L+AC + A + GK +H + K + E + F
Sbjct: 196 CGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVF 255
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDL-RN 313
+G AL D+Y+K G + +A VF+ + RN+ S+ A++ GY +KA+ L R
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFKKLTR-RNVFSWAALIGGYAAYGYAKKAMTCLERLERE 314
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHG-SLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
GI+P+ ++ ACA+ LE G S+L ++ S +VD+ + G D
Sbjct: 315 DGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLD 374
Query: 373 HSIQLFDEIE-NPNDTAWNTLVGVFAQHG---LGRNAIETFNEMVDRGLKPNAVTFVNL 427
++ L +++ P + W L+ H LG A++ ++ ++ V L
Sbjct: 375 DALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQL 433
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
Query: 1 MASRNLFRFRHKLC-----DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPC-TFLT 54
+ S L FR L D +V + CAQ L++GK +H + + + F+
Sbjct: 198 LGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVG 257
Query: 55 NHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQM-RAEGE 113
L+++Y+KCG ++ A+++F ++++RN+ SW A+I G+ ++A+ ++ R +G
Sbjct: 258 TALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGI 317
Query: 114 TASQFALSSVLQACASLGSIQFG-VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDAC 172
L VL ACA G ++ G + + + + S + D+ + G + DA
Sbjct: 318 KPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDAL 377
Query: 173 KVFEEMPCKD-EVLWTSMIDGYVKNGNFEKALIAYKKMV 210
+ E+MP K +W ++++G + N E +A K ++
Sbjct: 378 NLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLL 416
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 187/344 (54%), Gaps = 18/344 (5%)
Query: 237 GKSLHAIIVKFGFEYET-FIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGY 295
G+ +H ++ K GF YE+ IG L Y+K+GD+ A VF + R V++ A++ GY
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFD-EMPERTSVTWNAMIGGY 188
Query: 296 VEMDQL--EKALNAFIDLR-----NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVK 348
A A + R SG+ P + T ++ A + LE GSL+HG + K
Sbjct: 189 CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK 248
Query: 349 FNF--DRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAI 406
F + D F+ +ALVDMY KCG +++ +F+ ++ N W ++ A +G G
Sbjct: 249 LGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETP 308
Query: 407 ETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDL 466
N M + G+KPN +TF +LL H G+VE+G+ F SM +GV P EHY CI+DL
Sbjct: 309 NLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDL 368
Query: 467 LGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPEN---S 523
LG+AG+++E FI +MP +P A S AC +G+ + L+++E E+ S
Sbjct: 369 LGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLS 428
Query: 524 GA----HVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWV 563
G+ +V LSN+ A + +W +V LRK +++ +K PGYS+V
Sbjct: 429 GSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 117/252 (46%), Gaps = 11/252 (4%)
Query: 32 LSKGKQLHAQLIRGGCL-PCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMIT 90
L G+ +H + + G L + LL+ Y+K G+L YA K+FD M +R V+W AMI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 91 GFFR-----SLRFREALDTFCQMR--AEGETASQFALSSVLQACASLGSIQFGVQVHCLV 143
G+ + R+A+ F + G + + VL A + G ++ G VH +
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 144 VKSGFGCEL--FLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEK 201
K GF E+ F+G+ L DMYSKCG +++A VFE M K+ WTSM G NG +
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 202 ALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSL-HAIIVKFGFEYETFIGNALT 260
+M + ++ S LSA + G L ++ +FG +
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 261 DLYSKSGDMVSA 272
DL K+G + A
Sbjct: 367 DLLGKAGRIQEA 378
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCT--FLTNHLLNLYSKCGELDYAIKLFDRMSK 79
++ +Q L G +H + + G P F+ L+++YSKCG L+ A +F+ M
Sbjct: 226 VLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKV 285
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQV 139
+N+ +WT+M TG + R E + +M G ++ +S+L A +G ++ G+++
Sbjct: 286 KNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIEL 345
Query: 140 HCLVVKSGFGCELFLGSN--LTDMYSKCGEVSDACKVFEEMPCK-DEVLWTSM 189
+K+ FG + + D+ K G + +A + MP K D +L S+
Sbjct: 346 F-KSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSL 397
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 198/396 (50%), Gaps = 39/396 (9%)
Query: 206 YKKMVTDNVFIDQHVLCSTLSACTALKA--FSFGKSLHAIIVKFGFEYETFIGNALTDLY 263
+ +M +V D H AC A K + K+LH ++FG + F N L +Y
Sbjct: 103 FVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVY 162
Query: 264 S-------------------------------KSGDMVSASNVFQSDSGCRNIVSFTAIV 292
S K+ ++V A +F S R++VS+ +++
Sbjct: 163 SLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDS-MPLRDLVSWNSLI 221
Query: 293 DGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFD 352
GY +M+ +A+ F ++ G++P+ S + ACA + G +H +
Sbjct: 222 SGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLF 281
Query: 353 RDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEM 412
D F+++ LVD Y KCG D ++++F+ + WN ++ A HG G ++ F +M
Sbjct: 282 IDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKM 341
Query: 413 VDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGK 472
V G+KP+ VTF+++L GCSH+G+V++ N F M +Y V +HY C+ DLLGRAG
Sbjct: 342 VSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGL 401
Query: 473 LKEVEDFINSMPFE----PTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVL 528
++E + I MP + W LG C+ HG+ E A+ AA ++ L PE+ G + +
Sbjct: 402 IEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKV 461
Query: 529 LSNIYAKERQWEDVRCLRKMI-RDGNMKKLPGYSWV 563
+ +YA +WE+V +R++I RD +KK G+S V
Sbjct: 462 MVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 110/243 (45%), Gaps = 37/243 (15%)
Query: 22 LIQTCAQAK--ELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDR--- 76
+ + CA K +L+ K LH Q +R G L F N L+ +YS +D A++LFD
Sbjct: 121 VFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQ 180
Query: 77 ----------------------------MSKRNMVSWTAMITGFFRSLRFREALDTFCQM 108
M R++VSW ++I+G+ + REA+ F +M
Sbjct: 181 RDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEM 240
Query: 109 RAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEV 168
A G A+ S L ACA G Q G +H + + FL + L D Y+KCG +
Sbjct: 241 VALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFI 300
Query: 169 SDACKVFEEMPCKDEVL--WTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLS 226
A ++FE C D+ L W +MI G +GN E + ++KMV+ + D S L
Sbjct: 301 DTAMEIFE--LCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLV 358
Query: 227 ACT 229
C+
Sbjct: 359 GCS 361
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 181/439 (41%), Gaps = 72/439 (16%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTF-----LTNHLLNLYSKCGE-------LDY 69
L++ C K L Q HAQ I G + F N L + S + Y
Sbjct: 10 LLKLCRTLKHL---HQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSY 66
Query: 70 AIKLFDRMSKRNMVSWTAMI-------TGFFRSLRFREALDTFCQMRAEGETASQFALSS 122
A +F ++ + + +I S RF F +MR
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRF------FVEMRRRSVPPDFHTFPF 120
Query: 123 VLQACASL--GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYS----------------- 163
V +ACA+ G + +HC ++ G +LF + L +YS
Sbjct: 121 VFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQ 180
Query: 164 --------------KCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKM 209
K E+ A ++F+ MP +D V W S+I GY + + +A+ + +M
Sbjct: 181 RDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEM 240
Query: 210 VTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDM 269
V + D + STLSAC + GK++H + ++F+ L D Y+K G +
Sbjct: 241 VALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFI 300
Query: 270 VSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKA 329
+A +F+ S + + ++ A++ G E ++ F + +SGI+P+ TF S++
Sbjct: 301 DTAMEIFELCSD-KTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVG 359
Query: 330 CANQAKLEHGSLLHGQVVK-FNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPND-- 386
C++ ++ L Q+ ++ +R+ + D+ G+ GL + + ++ +++ P D
Sbjct: 360 CSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQM--PKDGG 417
Query: 387 -----TAWNTLVGVFAQHG 400
AW+ L+G HG
Sbjct: 418 NREKLLAWSGLLGGCRIHG 436
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ A+ + CAQ+ + KGK +H R +FL L++ Y+KCG +D A+++F
Sbjct: 248 DNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIF 307
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
+ S + + +W AMITG +D F +M + G SVL C+ G +
Sbjct: 308 ELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVD 367
Query: 135 FGV----QVHCLV----VKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP----CKD 182
Q+ L +GC + D+ + G + +A ++ E+MP ++
Sbjct: 368 EARNLFDQMRSLYDVNREMKHYGC-------MADLLGRAGLIEEAAEMIEQMPKDGGNRE 420
Query: 183 EVL-WTSMIDGYVKNGNFEKA 202
++L W+ ++ G +GN E A
Sbjct: 421 KLLAWSGLLGGCRIHGNIEIA 441
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 212/410 (51%), Gaps = 4/410 (0%)
Query: 154 LGSNLTDMYSKCGEV-SDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTD 212
L S L YSK + + VF MP ++ W +I + ++G K++ + +M +
Sbjct: 68 LSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRE 127
Query: 213 N-VFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVS 271
+ V D L L AC+A + G +H + +K GF F+ +AL +Y G ++
Sbjct: 128 SCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLH 187
Query: 272 ASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACA 331
A +F D R+ V +TA+ GYV+ + L F ++ SG + SL+ AC
Sbjct: 188 ARKLFD-DMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACG 246
Query: 332 NQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNT 391
L+HG +HG ++ + +A+ DMY KC + D++ +F + + +W++
Sbjct: 247 QLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSS 306
Query: 392 LVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIY 451
L+ + G + + F+EM+ G++PNAVTF+ +L C+H G+VE YF M + Y
Sbjct: 307 LILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-Y 365
Query: 452 GVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLA 511
++P +HY + D + RAG L+E E F+ MP +P + L CK +G+ E +
Sbjct: 366 NIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERV 425
Query: 512 AYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYS 561
A +L++L+P + +V L+ +Y+ ++++ LR+ +++ + K+PG S
Sbjct: 426 ARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 197/430 (45%), Gaps = 41/430 (9%)
Query: 53 LTNHLLNLYSKCGEL-DYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQM-RA 110
L++ L+ YSK L ++ +F M RN+ SW +I F RS +++D F +M R
Sbjct: 68 LSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRE 127
Query: 111 EGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSD 170
F L +L+AC++ + G +H L +K GF LF+ S L MY G++
Sbjct: 128 SCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLH 187
Query: 171 ACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTA 230
A K+F++MP +D VL+T+M GYV+ G L +++M +D V+ S L AC
Sbjct: 188 ARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQ 247
Query: 231 LKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTA 290
L A GKS+H ++ +GNA+TD+Y K + A VF + S R+++S+++
Sbjct: 248 LGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSR-RDVISWSS 306
Query: 291 IVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFN 350
++ GY + + F ++ GIEPN TF ++ ACA+ +E L + ++N
Sbjct: 307 LILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYN 366
Query: 351 FDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFN 410
+ +++ D + GL + + E F
Sbjct: 367 IVPELKHYASVADCMSRAGLLEEA--------------------------------EKFL 394
Query: 411 EMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPRE-EHYNCIIDLLGR 469
E D +KP+ +L GC G VE G ++ + PR+ +Y + L
Sbjct: 395 E--DMPVKPDEAVMGAVLSGCKVYGNVEVGERV---ARELIQLKPRKASYYVTLAGLYSA 449
Query: 470 AGKLKEVEDF 479
AG+ E E
Sbjct: 450 AGRFDEAESL 459
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 106/215 (49%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + +++ C+ ++E G +H ++ G F+++ L+ +Y G+L +A KLF
Sbjct: 133 DDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLF 192
Query: 75 DRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ 134
D M R+ V +TAM G+ + L F +M G + S+L AC LG+++
Sbjct: 193 DDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALK 252
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYV 194
G VH ++ L LG+ +TDMY KC + A VF M +D + W+S+I GY
Sbjct: 253 HGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYG 312
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACT 229
+G+ + + +M+ + + + LSAC
Sbjct: 313 LDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACA 347
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 178/367 (48%), Gaps = 11/367 (2%)
Query: 326 LIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPN 385
L K C L+ +HG++ D + L++MY CGL + + +F+++ N
Sbjct: 260 LAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKN 319
Query: 386 DTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFY 445
W ++ FA++G G +AI+ F+ + G P+ F + C G V++GL +F
Sbjct: 320 LETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFE 379
Query: 446 SMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDK 505
SM + YG+ P E Y ++++ G L E +F+ MP EP W + + + HG+
Sbjct: 380 SMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNL 439
Query: 506 ERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDI 565
E A + L+P I K E L+K R G + +
Sbjct: 440 ELGDYCAEVVEFLDPTRLNKQSREGFIPVKASDVEK-ESLKK--RSGILH--------GV 488
Query: 566 GNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHS 625
+ F D + P E+++ L +L + VGYV +T L ++D KE LL HS
Sbjct: 489 KSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHS 548
Query: 626 ERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGS 685
ERIA A ++L S KP V KNLRVC DCH+A K +S + R +I RDI RFH NG+
Sbjct: 549 ERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGA 608
Query: 686 CSCGDYW 692
C+C DYW
Sbjct: 609 CTCKDYW 615
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 95/192 (49%), Gaps = 6/192 (3%)
Query: 13 LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNH-LLNLYSKCGELDYAI 71
+ D + +L + C +A+ L + K +H + I +NH LL +YS CG + A
Sbjct: 251 VVDLSRLLRLAKICGEAEGLQEAKTVHGK-ISASVSHLDLSSNHVLLEMYSNCGLANEAA 309
Query: 72 KLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLG 131
+F++MS++N+ +W +I F ++ +A+D F + + EG + AC LG
Sbjct: 310 SVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLG 369
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGS--NLTDMYSKCGEVSDACKVFEEMPCKDEV-LWTS 188
+ G+ +H + +G + +L +MY+ G + +A + E MP + V +W +
Sbjct: 370 DVDEGL-LHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWET 428
Query: 189 MIDGYVKNGNFE 200
+++ +GN E
Sbjct: 429 LMNLSRVHGNLE 440
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 5/213 (2%)
Query: 191 DGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFE 250
D + K+G +KAL + + N +D L C + K++H I
Sbjct: 227 DAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSH 286
Query: 251 YETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID 310
+ + L ++YS G A++VF+ S +N+ ++ I+ + + E A++ F
Sbjct: 287 LDLSSNHVLLEMYSNCGLANEAASVFEKMSE-KNLETWCIIIRCFAKNGFGEDAIDMFSR 345
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS--ALVDMYGKC 368
+ G P+ F + AC ++ G LLH + + ++ P + +LV+MY
Sbjct: 346 FKEEGNIPDGQLFRGIFYACGMLGDVDEG-LLHFESMSRDYGIAPSIEDYVSLVEMYALP 404
Query: 369 GLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHG 400
G D +++ + + PN W TL+ + HG
Sbjct: 405 GFLDEALEFVERMPMEPNVDVWETLMNLSRVHG 437
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 180/353 (50%), Gaps = 35/353 (9%)
Query: 246 KFGFEYETFIGNALTDLYSKSGDMVSASNVFQS-----------------------DSGC 282
K GFE ++ AL +Y G+M+ A VF + C
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 283 -------RNIVSFTAIVDGYVEMDQLEKALNAFIDLRN-SGIEPNEFTFSSLIKACANQA 334
R +VS+T I+DGY +D+ ++A+ F + I+PNE T +++ A N
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 335 KLEHGSLLHGQVVKFNFDR-DPFVSSALVDMYGKCGLFDHSIQLFDEIEN--PNDTAWNT 391
L+ +H V K F D V+++L+D Y KCG + + F EI N N +W T
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 392 LVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG-LNYFYSMDKI 450
++ FA HG+G+ A+ F +M GLKPN VT +++L CSH G+ E+ L +F +M
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 451 YGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKL 510
Y + P +HY C++D+L R G+L+E E +P E A W LGAC + D E A+
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAER 450
Query: 511 AAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWV 563
KLM+LE + G +VL+SNI+ ++ D + RK + + KLPG+S V
Sbjct: 451 VTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 135/287 (47%), Gaps = 37/287 (12%)
Query: 145 KSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALI 204
K GF +++ + L MY G + DA KVF+EMP ++ V W MI G G+FEKAL
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 205 AYKKM-----VTDNVFIDQH----------VLCSTLSACTALK------------AFSFG 237
+KM V+ ID + +L S + AC A+K ++ G
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 238 K-----SLHAIIVKFGF-EYETFIGNALTDLYSKSGDMVSASNVF-QSDSGCRNIVSFTA 290
S+HA + K GF + + N+L D Y+K G + SA F + +G +N+VS+T
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 291 IVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQ--AKLEHGSLLHGQVVK 348
++ + ++A++ F D+ G++PN T S++ AC++ A+ E + V +
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 349 FNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVG 394
+ D LVDM + G + + ++ EI W L+G
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLG 437
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 102/185 (55%), Gaps = 6/185 (3%)
Query: 49 PCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQM 108
P T+ N ++ + G+ + A+ ++M R +VSWT +I G+ R + +EA+ F +M
Sbjct: 189 PVTW--NVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRM 246
Query: 109 RA-EGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGF-GCELFLGSNLTDMYSKCG 166
A + ++ + ++L A +LG ++ VH V K GF C++ + ++L D Y+KCG
Sbjct: 247 VACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCG 306
Query: 167 EVSDACKVFEEMPC--KDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCST 224
+ A K F E+P K+ V WT+MI + +G ++A+ +K M + ++ + S
Sbjct: 307 CIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISV 366
Query: 225 LSACT 229
L+AC+
Sbjct: 367 LNACS 371
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 20/166 (12%)
Query: 38 LHAQLIRGGCLPCTF-LTNHLLNLYSKCGELDYAIKLFDRMS--KRNMVSWTAMITGFFR 94
+HA + + G +PC +TN L++ Y+KCG + A K F + ++N+VSWT MI+ F
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 95 SLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ------FGVQVHCLVVKSG- 147
+EA+ F M G ++ + SVL AC+ G + F V+ +
Sbjct: 338 HGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDV 397
Query: 148 --FGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDE-VLWTSMI 190
+GC L DM + G + +A K+ E+P +++ V+W ++
Sbjct: 398 KHYGC-------LVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLL 436
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/442 (29%), Positives = 214/442 (48%), Gaps = 38/442 (8%)
Query: 263 YSKSGDMV-----SASNVFQSD-SGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI 316
Y +G+ V + N FQ D SG ++ +I +++KA+ RN G
Sbjct: 122 YGTTGNGVPQENNTGGNHFQQDHSGHSSLDELDSIC----REGKVKKAVEIIKSWRNEGY 177
Query: 317 EPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQ 376
+ + + C + L+ ++H + D +++++MY CG + ++
Sbjct: 178 VVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALT 237
Query: 377 LFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGM 436
+F+ + N W ++ FA++G G +AI+TF+ G KP+ F + C G
Sbjct: 238 VFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGD 297
Query: 437 VEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFL 496
+ +GL +F SM K YG++P EHY ++ +L G L E F+ SM EP W + +
Sbjct: 298 MNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLM 355
Query: 497 GACKTHGD---KERAKLAAYKL--MKLEPENSGAHVLL-SNIYAKERQWEDVRCLRKMIR 550
+ HGD +R + +L +L E+ V + S+ KE+ L++M +
Sbjct: 356 NLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEK-------LQRMAK 408
Query: 551 DGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLI 610
N G ++ G D S P +E+Y L SL + + +GYVP ++ L
Sbjct: 409 GPNY----GIRYMAAG---------DISRPENRELYMALKSLKEHMIEIGYVPLSKLALH 455
Query: 611 EMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNI 670
++D K++ L NH+ER A + L +P I V KNLRVC+DCH+A K +SK+ R +
Sbjct: 456 DVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGREL 515
Query: 671 IVRDISRFHHFSNGSCSCGDYW 692
I RD RFHH +G CSC +YW
Sbjct: 516 ISRDAKRFHHMKDGVCSCREYW 537
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 86/175 (49%), Gaps = 10/175 (5%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
+ Q C A+ L + K +H + + N ++ +YS CG ++ A+ +F+ M +RN
Sbjct: 187 IAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERN 246
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
+ +W +I F ++ + +A+DTF + + EG + AC LG + G+ +H
Sbjct: 247 LETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGL-LHF 305
Query: 142 LVVKSGFGC----ELFLGSNLTDMYSKCGEVSDACKVFEEM-PCKDEVLWTSMID 191
+ +G E ++ +L M ++ G + +A + E M P D LW ++++
Sbjct: 306 ESMYKEYGIIPCMEHYV--SLVKMLAEPGYLDEALRFVESMEPNVD--LWETLMN 356
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%)
Query: 94 RSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELF 153
R + ++A++ R EG L + Q C ++Q VH + S ++
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDIS 217
Query: 154 LGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDN 213
+++ +MYS CG V DA VF MP ++ W +I + KNG E A+ + + +
Sbjct: 218 AYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEG 277
Query: 214 VFIDQHVLCSTLSACTALKAFSFG 237
D + AC L + G
Sbjct: 278 NKPDGEMFKEIFFACGVLGDMNEG 301
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 193/406 (47%), Gaps = 38/406 (9%)
Query: 121 SSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPC 180
S L+ C++ ++ Q+H ++K + L L + S GE A VF ++
Sbjct: 24 SYFLRTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQS 80
Query: 181 KDEVLWTSMIDGYVKNGNFEKALIAY-KKMVTDNVFIDQHVLCSTLSACTALKAFSFGKS 239
W MI N +AL+ + M++ D+ + AC A + G
Sbjct: 81 PSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQ 140
Query: 240 LHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVF----------------------Q 277
+H + +K GF + F N L DLY K G S VF Q
Sbjct: 141 VHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQ 200
Query: 278 SDSG--------CRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKA 329
DS RN+VS+TA++ YV+ + ++A F ++ ++PNEFT +L++A
Sbjct: 201 LDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQA 260
Query: 330 CANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAW 389
L G +H K F D F+ +AL+DMY KCG + ++FD ++ + W
Sbjct: 261 STQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATW 320
Query: 390 NTLVGVFAQHGLGRNAIETFNEMVDRG-LKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMD 448
N+++ HG G A+ F EM + ++P+A+TFV +L C++ G V+DGL YF M
Sbjct: 321 NSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMI 380
Query: 449 KIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEP---TAFG 491
++YG+ P EH C+I LL +A ++++ + + SM +P ++FG
Sbjct: 381 QVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPDFNSSFG 426
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 173/357 (48%), Gaps = 37/357 (10%)
Query: 16 SKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFD 75
S + ++TC+ +L KQ+H ++I+ L L+++ S GE YA +F+
Sbjct: 20 SPEASYFLRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFN 76
Query: 76 RMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETA-SQFALSSVLQACASLGSIQ 134
++ + +W MI + + REAL F M ++ +F V++AC + SI+
Sbjct: 77 QLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIR 136
Query: 135 FGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFE------------------ 176
G QVH L +K+GF ++F + L D+Y KCG+ KVF+
Sbjct: 137 LGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLV 196
Query: 177 -------------EMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCS 223
+MP ++ V WT+MI YVKN ++A +++M D+V ++ + +
Sbjct: 197 SNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVN 256
Query: 224 TLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCR 283
L A T L + S G+ +H K GF + F+G AL D+YSK G + A VF G +
Sbjct: 257 LLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQG-K 315
Query: 284 NIVSFTAIVDGYVEMDQLEKALNAF-IDLRNSGIEPNEFTFSSLIKACANQAKLEHG 339
++ ++ +++ E+AL+ F + +EP+ TF ++ ACAN ++ G
Sbjct: 316 SLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 9/180 (5%)
Query: 6 LFRFRHKLCDSK----AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLY 61
LFR R ++ D K + L+Q Q LS G+ +H + G + FL L+++Y
Sbjct: 238 LFR-RMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMY 296
Query: 62 SKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET-ASQFAL 120
SKCG L A K+FD M +++ +W +MIT EAL F +M E
Sbjct: 297 SKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITF 356
Query: 121 SSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSN--LTDMYSKCGEVSDACKVFEEM 178
VL ACA+ G+++ G++ +++ +G N + + + EV A + E M
Sbjct: 357 VGVLSACANTGNVKDGLRYFTRMIQV-YGISPIREHNACMIQLLEQALEVEKASNLVESM 415
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 181/393 (46%), Gaps = 22/393 (5%)
Query: 303 KALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALV 362
+A+ L N G + L K C LE ++H ++ D +A++
Sbjct: 102 EAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAII 161
Query: 363 DMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAV 422
+MY C D ++++F+E+ N ++ F +G G AI+ F + G KPN
Sbjct: 162 EMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGE 221
Query: 423 TFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINS 482
F + C+ G V++G F +M + YG++P EHY+ + +L +G L E +F+
Sbjct: 222 IFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVER 281
Query: 483 MPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDV 542
MP EP+ W + + + HGD E A + KL+ + K +
Sbjct: 282 MPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLDKVSSAGLVATKASDF--- 338
Query: 543 RCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYV 602
+ ++ + + P + F D SHP+ IYE L SL Q+K +GYV
Sbjct: 339 -----VKKEPSTRSEPYF--------YSTFRPVDSSHPQMNIIYETLMSLRSQLKEMGYV 385
Query: 603 PQT---ESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAF 659
P T S+++ M++ KE++ + E IAV SLL S I + N+R+ DCH
Sbjct: 386 PDTRYYRSLIMAMEN--KEQIF-GYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMM 442
Query: 660 KYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
K +S +T R++I RD +H F NG C C + W
Sbjct: 443 KLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 4/182 (2%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTF-LTNHLLNLYSKCGELDYAIKLFDRMSKR 80
L + C + + L + +H +I PC N ++ +YS C +D A+K+F+ M +
Sbjct: 125 LAKLCGKPEALEAARVVHECII-ALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEW 183
Query: 81 NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFG-VQV 139
N + M+ F + EA+D F + + EG + + V C G ++ G +Q
Sbjct: 184 NSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQF 243
Query: 140 HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEV-LWTSMIDGYVKNGN 198
+ + G + ++T M + G + +A E MP + V +W ++++ +G+
Sbjct: 244 QAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGD 303
Query: 199 FE 200
E
Sbjct: 304 VE 305
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 1/181 (0%)
Query: 98 FREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSN 157
+REA++ + +G L + + C +++ VH ++ C++ +
Sbjct: 100 WREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNA 159
Query: 158 LTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFID 217
+ +MYS C V DA KVFEEMP + M+ +V NG E+A+ + + + +
Sbjct: 160 IIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPN 219
Query: 218 QHVLCSTLSACTALKAFSFGK-SLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVF 276
+ S CT G A+ ++G +++T + + SG + A N
Sbjct: 220 GEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFV 279
Query: 277 Q 277
+
Sbjct: 280 E 280
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/476 (24%), Positives = 217/476 (45%), Gaps = 43/476 (9%)
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFE---EMPCKDEVLWTS 188
SI QVH ++ SG + L S+ G+ S ++ ++ C + V
Sbjct: 34 SITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKLYCANPVF--- 90
Query: 189 MIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFG 248
Y+ + + ++AL Y ++ D + S +S GK H +K G
Sbjct: 91 --KAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 249 FEYETFIGNALTDLYS-------------------------------KSGDMVSASNVFQ 277
+ + N+L +Y+ ++GD+++A +F
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 278 SDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLE 337
+NI+S+ ++ Y+ + +++ F ++ +G + NE T L+ AC A+L+
Sbjct: 209 EMPD-KNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLK 267
Query: 338 HGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFA 397
G +H +++ + + +AL+DMYGKC + ++FD + N WN ++
Sbjct: 268 EGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHC 327
Query: 398 QHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPRE 457
HG +E F M++ L+P+ VTFV +L GC+ AG+V G +Y+ M + + P
Sbjct: 328 LHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNF 387
Query: 458 EHYNCIIDLLGRAGKLKEVEDFINSMPFE---PTAFGWCSFLGACKTHGDKERAKLAAYK 514
H C+ +L AG +E E+ + ++P E P + W + L + + G+ + A
Sbjct: 388 GHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKS 447
Query: 515 LMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYSWVDIGNETH 570
L++ +P N + LL NIY+ +WEDV +R+M+++ + ++PG VD+ H
Sbjct: 448 LIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 34/286 (11%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS LI + + GK H Q I+ GC + N L+++Y+ CG LD A KLF
Sbjct: 117 DSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLF 176
Query: 75 DRMSKRNMVSWTAMITGFFRS-------LRFREALDT----------------------- 104
+ KR++VSW ++I G R+ F E D
Sbjct: 177 VEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSIS 236
Query: 105 -FCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYS 163
F +M G ++ L +L AC ++ G VH ++++ + + + L DMY
Sbjct: 237 LFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYG 296
Query: 164 KCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCS 223
KC EV A ++F+ + +++V W MI + +G E L ++ M+ + D+
Sbjct: 297 KCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVG 356
Query: 224 TLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNA--LTDLYSKSG 267
L C S G+S ++++V F+ + G+ + +LYS +G
Sbjct: 357 VLCGCARAGLVSQGQSYYSLMVD-EFQIKPNFGHQWCMANLYSSAG 401
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 185/476 (38%), Gaps = 78/476 (16%)
Query: 37 QLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSL 96
Q+HA+LI G + LL S+ G+ Y + ++ + K + + + S
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK--LYCANPVFKAYLVSS 97
Query: 97 RFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGS 156
++AL + + G + S++ + G H +K G L + +
Sbjct: 98 SPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQN 157
Query: 157 NLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNF-----------EKALIA 205
+L MY+ CG + A K+F E+P +D V W S+I G V+NG+ +K +I+
Sbjct: 158 SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIIS 217
Query: 206 --------------------YKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIV 245
+++MV ++ L L+AC G+S+HA ++
Sbjct: 218 WNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLI 277
Query: 246 KFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKAL 305
+ I AL D+Y K ++ A +F S S RN V++ ++ + + E L
Sbjct: 278 RTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLS-IRNKVTWNVMILAHCLHGRPEGGL 336
Query: 306 NAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMY 365
F + N + P+E TF ++ CA + G + S +VD +
Sbjct: 337 ELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYY---------------SLMVDEF 381
Query: 366 GKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFV 425
F H W + +++ G A E + D + P + +
Sbjct: 382 QIKPNFGHQ--------------W-CMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWA 426
Query: 426 NLLKGCSHAG-----------MVE-DGLN--YFYSMDKIYGVMPREEHYNCIIDLL 467
NLL G ++E D LN Y++ + IY V R E N + +++
Sbjct: 427 NLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMV 482
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 206/453 (45%), Gaps = 36/453 (7%)
Query: 257 NALTDLYSKSGDMVSASNVFQSDS--GCRNIVSFTAIV-----------DGYVEMDQLEK 303
N +T + S V ++Q+ S CR + S+ +V D + ++ +
Sbjct: 36 NLITKTITSSLQDVLTRPIWQNRSFVQCRRVSSYAQMVNNHQSVTIETFDALCKQVKIRE 95
Query: 304 ALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVD 363
AL L + G + L K C LE ++H + D +++
Sbjct: 96 ALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPL----DARSYHTVIE 151
Query: 364 MYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVT 423
MY C D ++ +F+E+ N W T++ A++G G AI+ F ++ G KP+
Sbjct: 152 MYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEI 211
Query: 424 FVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
F + C G + +GL +F SM + YG++ E Y +I++L G L E DF+ M
Sbjct: 212 FKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERM 271
Query: 484 PFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPE--NSGAHVLLSNIYAKERQWED 541
EP+ W + + C G E A + KL+ + ++ L A + E
Sbjct: 272 TVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVAAKASDSAMEK 331
Query: 542 VRCLR--KMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIV 599
++ LR +MIRD K++ H F D SH + SL Q+ +
Sbjct: 332 LKELRYCQMIRDDPKKRM------------HEFRAGDTSHLGTVSAFR---SLKVQMLDI 376
Query: 600 GYVPQTESVLIEMDDTLKEKLLHNHSERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAF 659
G+VP T + +++ KE+ L S ++A A++++ S +P+ V +N+R C D H+ F
Sbjct: 377 GFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTF 436
Query: 660 KYISKVTERNIIVRDISRFHHFSNGSCSCGDYW 692
K IS +T R +I RD ++H + NG CSC DYW
Sbjct: 437 KMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 17/193 (8%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCL-PCTFLTNH-LLNLYSKCGELDYAIKLFDRMSK 79
L + C + + L + + +H C+ P + H ++ +YS C D A+ +F+ M K
Sbjct: 118 LAKLCGEVEALEEARVVH------DCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPK 171
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQV 139
RN +W MI ++ A+D F + EG + +V AC S+G I G+ +
Sbjct: 172 RNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGL-L 230
Query: 140 HCLVVKSGFGCELFLGS--NLTDMYSKCGEVSDACKVFEEMPCKDEV-LWTSM-----ID 191
H + +G L + N+ +M + CG + +A E M + V +W ++ +
Sbjct: 231 HFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQ 290
Query: 192 GYVKNGNFEKALI 204
GY++ G+ LI
Sbjct: 291 GYLELGDRFAELI 303
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 6/139 (4%)
Query: 94 RSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVH-CLVVKSGFGCEL 152
+ ++ REAL+ + +G L + + C + +++ VH C+
Sbjct: 89 KQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARSYH- 147
Query: 153 FLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTD 212
+ +MYS C DA VF EMP ++ W +MI KNG E+A+ + + + +
Sbjct: 148 ----TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEE 203
Query: 213 NVFIDQHVLCSTLSACTAL 231
D+ + + AC ++
Sbjct: 204 GNKPDKEIFKAVFFACVSI 222
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 203/465 (43%), Gaps = 77/465 (16%)
Query: 35 GKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFR 94
G A + + G ++ N ++++Y K ++ A K+FD++S+R W MI+G+++
Sbjct: 120 GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWK 179
Query: 95 SLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFL 154
EA F M E + S V+ +GF
Sbjct: 180 WGNKEEACKLF-DMMPENDVVS------------------------WTVMITGF------ 208
Query: 155 GSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNV 214
+K ++ +A K F+ MP K V W +M+ GY +NG E AL + M+ V
Sbjct: 209 --------AKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGV 260
Query: 215 FIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASN 274
++ +SAC+ S +SL +I + F+ AL D+++K D+ SA
Sbjct: 261 RPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARR 320
Query: 275 VFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI------------------ 316
+F RN+V++ A++ GY + + A F + +
Sbjct: 321 IFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAAL 380
Query: 317 --------------EPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALV 362
+P+E T S++ AC + A LE G + + K + +L+
Sbjct: 381 AIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLI 440
Query: 363 DMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAV 422
MY + G + ++FDE++ + ++NTL FA +G G + ++M D G++P+ V
Sbjct: 441 FMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRV 500
Query: 423 TFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLL 467
T+ ++L C+ AG++++G F S+ P +HY C +DLL
Sbjct: 501 TYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYAC-MDLL 539
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 125/521 (23%), Positives = 212/521 (40%), Gaps = 88/521 (16%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLP-CTFLTNHLLNLYSKCGELDYAIKL-FDRMSK 79
L +QA + Q+HAQLI LP ++ + +++ ++ Y +L FD ++
Sbjct: 9 LAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTF 68
Query: 80 RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQV 139
N+ +M F + + L + Q G F+ V+++ +FG+
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG-----RFGILF 123
Query: 140 HCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNF 199
LV K GF + ++ + + DMY K V A KVF+++ + W MI GY K GN
Sbjct: 124 QALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNK 183
Query: 200 EKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNAL 259
E+A + M ++V S +I F
Sbjct: 184 EEACKLFDMMPENDVV-----------------------SWTVMITGF------------ 208
Query: 260 TDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPN 319
+K D+ +A F +++VS+ A++ GY + E AL F D+ G+ PN
Sbjct: 209 ----AKVKDLENARKYFDRMPE-KSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 320 EFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKC----------- 368
E T+ +I AC+ +A L + + + FV +AL+DM+ KC
Sbjct: 264 ETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 369 ---------------------GLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIE 407
G + QLFD + N +WN+L+ +A +G AIE
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 408 TFNEMVDRG-LKPNAVTFVNLLKGCSHAGMVEDG---LNYFYSMDKIYGVMPREEHYNCI 463
F +M+D G KP+ VT +++L C H +E G ++Y + + + Y +
Sbjct: 384 FFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYI----RKNQIKLNDSGYRSL 439
Query: 464 IDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGD 504
I + R G L E + + M E + + A +GD
Sbjct: 440 IFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLFTAFAANGD 479
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 125/271 (46%), Gaps = 22/271 (8%)
Query: 2 ASRNLFRFRHKLCDSKAV-------AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLT 54
A +L R KL D K V L+ A+ +++ +++ +L G
Sbjct: 278 ADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTW 334
Query: 55 NHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGET 114
N +++ Y++ G++ A +LFD M KRN+VSW ++I G+ + + A++ F M G++
Sbjct: 335 NAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDS 394
Query: 115 -ASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACK 173
+ + SVL AC + ++ G + + K+ +L MY++ G + +A +
Sbjct: 395 KPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKR 454
Query: 174 VFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKA 233
VF+EM +D V + ++ + NG+ + L KM + + D+ S L+AC
Sbjct: 455 VFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACN---- 510
Query: 234 FSFGKSLHAIIVKFGFEYETFIGNALTDLYS 264
A ++K G I N L D Y+
Sbjct: 511 -------RAGLLKEGQRIFKSIRNPLADHYA 534
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 87/127 (68%)
Query: 566 GNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKIVGYVPQTESVLIEMDDTLKEKLLHNHS 625
G++ + G E + + + Y KL SL +++ GYVP+T+ VL ++D+ KEK L +HS
Sbjct: 113 GDKPEISGGEKKAIVDRSKAYVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHS 172
Query: 626 ERIAVAYSLLVSPIGKPIIVKKNLRVCSDCHSAFKYISKVTERNIIVRDISRFHHFSNGS 685
ER+A+A+ ++ +P G I V KNLR+C DCH+ K +S + +R IIVRD RFHHF +G+
Sbjct: 173 ERLAIAFGIINTPPGTTIRVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGN 232
Query: 686 CSCGDYW 692
CSCGDYW
Sbjct: 233 CSCGDYW 239
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 172/384 (44%), Gaps = 15/384 (3%)
Query: 121 SSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP- 179
S+++ G + ++ G+G ++ S L Y + G +A VF M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 180 ---CKDEVLWTSMIDGYVKNG-NFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFS 235
+ V + ++ID K G F++ + +M + V D+ S L+ C+ +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 236 FGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCR---NIVSFTAIV 292
++L + E + F N L D K G M A + R N+VS++ ++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 293 DGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFD 352
DG+ + + ++ALN F ++R GI + ++++L+ + E + ++
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 353 RDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIET 408
+D +AL+ YGK G +D ++F E++ PN ++TL+ +++ GL + A+E
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 409 FNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLG 468
F E GL+ + V + L+ G+V ++ M K G+ P YN IID G
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTK-EGISPNVVTYNSIIDAFG 595
Query: 469 RAGKLKEVEDFIN--SMPFEPTAF 490
R+ + D+ N S+PF +A
Sbjct: 596 RSATMDRSADYSNGGSLPFSSSAL 619
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/493 (21%), Positives = 210/493 (42%), Gaps = 51/493 (10%)
Query: 8 RFRHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGEL 67
R R K K + +I T + +++ K++ GG + + L++ Y + G
Sbjct: 225 RERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLH 284
Query: 68 DYAIKLFDRMS----KRNMVSWTAMITGFFRS-LRFREALDTFCQMRAEGETASQFALSS 122
+ AI +F+ M + N+V++ A+I + + F++ F +M+ G + +S
Sbjct: 285 EEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNS 344
Query: 123 VLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK- 181
+L C+ G + + + ++F + L D K G++ A ++ +MP K
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 182 ---DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGK 238
+ V ++++IDG+ K G F++AL + +M + +D+ + LS T + G+
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKV-----GR 459
Query: 239 SLHAI-----IVKFGFEYETFIGNALTDLYSKSGDMVSASNVF---QSDSGCRNIVSFTA 290
S A+ + G + + NAL Y K G VF + + N+++++
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYST 519
Query: 291 IVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFN 350
++DGY + ++A+ F + +++G+ + +S+LI A + L ++ K
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 351 FDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENP---------NDTAWNTLVGVFAQHGL 401
+ ++++D +G+ D S + P +T N ++ +F Q
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTT 639
Query: 402 GRN----------------AIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFY 445
N +E F +M +KPN VTF +L CS ED
Sbjct: 640 ESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLE 699
Query: 446 SM----DKIYGVM 454
+ +K+YGV+
Sbjct: 700 ELRLFDNKVYGVV 712
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 357 VSSALVDMYGKCGLFDHSIQLFDEI----ENPNDTAWNTLVGVFAQHGLGRNAIETFNEM 412
++SA++ G+ G + ++F+ A++ L+ + + GL AI FN M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 413 VDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGK 472
+ GL+PN VT+ ++ C GM + F+ + GV P +N ++ + R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 473 LKEVEDFINSMP---FEPTAFGWCSFLGA-CK 500
+ + + M E F + + L A CK
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 188/456 (41%), Gaps = 23/456 (5%)
Query: 65 GELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFRE-------ALDTFCQMRAEGETASQ 117
G+LD + K S ++ + F + L F + A D F + +
Sbjct: 114 GQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDN 173
Query: 118 FALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEE 177
++ ++ G + + + + GF +++ ++L ++ G +A VF++
Sbjct: 174 SVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKK 233
Query: 178 MP---CKDEVL-WTSMIDGYVKNGN-FEKALIAYKKMVTDNVFIDQHVLCSTLSACTALK 232
M CK ++ + +++ + K G + K +KM +D + D + + ++ C
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293
Query: 233 AFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS---DSGCRNIVSFT 289
+ + GF Y+ NAL D+Y KS A V + +IV++
Sbjct: 294 LHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYN 353
Query: 290 AIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF 349
+++ Y L++A+ + G +P+ FT+++L+ K+E + ++
Sbjct: 354 SLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA 413
Query: 350 NFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE----NPNDTAWNTLVGVFAQHGLGRNA 405
+ +A + MYG G F +++FDEI +P+ WNTL+ VF Q+G+
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473
Query: 406 IETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIID 465
F EM G P TF L+ S G E + + M GV P YN ++
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLA 532
Query: 466 LLGRAGKLKEVEDFINSMP---FEPTAFGWCSFLGA 498
L R G ++ E + M +P +CS L A
Sbjct: 533 ALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 203/459 (44%), Gaps = 76/459 (16%)
Query: 248 GFEYETFIGNALTDLYSKSGDMVSASNVFQ--SDSGCR-NIVSFTAIVDGYVEMDQLEKA 304
GF + + +L ++ SG A NVF+ + GC+ ++++ I++ + +M
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 305 LNAFID-LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVD 363
+ + ++ +++ GI P+ +T+++LI C + + + + ++ F D +AL+D
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 364 MYGKCGLFDHSIQLFDEIE----NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKP 419
+YGK ++++ +E+ +P+ +N+L+ +A+ G+ A+E N+M ++G KP
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 420 NAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKE---V 476
+ T+ LL G AG VE ++ F M + G P +N I + G GK E +
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 477 EDFINSMPFEPTAFGWCSFLGACKTHG-DKERAKLAAYKLMK---LEPENSGAHVLLSNI 532
D IN P W + L +G D E + +K MK PE + L+S
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS--GVFKEMKRAGFVPERETFNTLIS-A 498
Query: 533 YAKERQWEDVRCL-RKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDS 591
Y++ +E + R+M+ G L Y ++
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTY-----------------------------NT 529
Query: 592 LLDQIKIVGYVPQTESVLIEMDDTL------------------KE-KLLHNHSERIAVAY 632
+L + G Q+E VL EM+D KE L+H+ +E + Y
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV---Y 586
Query: 633 SLLVSPIGKPIIVKKNLRVCSDCH---SAFKYISKVTER 668
S ++ P + +++K + VCS C A + S++ ER
Sbjct: 587 SGVIEP--RAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/466 (20%), Positives = 204/466 (43%), Gaps = 20/466 (4%)
Query: 41 QLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM----SKRNMVSWTAMITGFFRSL 96
+++ G P N L++ Y++ G LD A++L ++M +K ++ ++T +++GF R+
Sbjct: 339 EMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAG 398
Query: 97 RFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGS 156
+ A+ F +MR G + ++ ++ + G +++ + G ++ +
Sbjct: 399 KVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWN 458
Query: 157 NLTDMYSKCGEVSDACKVFEEMP----CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTD 212
L ++ + G S+ VF+EM + + ++I Y + G+FE+A+ Y++M+
Sbjct: 459 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA 518
Query: 213 NVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKS---GDM 269
V D + L+A + + + A + + +L Y+ G M
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLM 578
Query: 270 VSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKA 329
S + S V +V + D L +A AF +L+ G P+ T +S++
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI 638
Query: 330 CANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE----NPN 385
+ + + + + + F ++L+ M+ + F S ++ EI P+
Sbjct: 639 YGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Query: 386 DTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFY 445
++NT++ + ++ R+A F+EM + G+ P+ +T+ + + M E+ +
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758
Query: 446 SMDKIYGVMPREEHYNCIIDLLGRAGKLKE----VEDFINSMPFEP 487
M K +G P + YN I+D + + E VED N P P
Sbjct: 759 YMIK-HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/476 (20%), Positives = 201/476 (42%), Gaps = 29/476 (6%)
Query: 46 GCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS----KRNMVSWTAMITGFFRSLRFREA 101
G P + N L+ + A ++F+ M + V++ A++ + +S R +EA
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 102 LDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDM 161
+ +M G + S +S++ A A G + +++ + + G ++F + L
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 162 YSKCGEVSDACKVFEEMP---CKDEV-LWTSMIDGYVKNGNFEKALIAYKKMVTDNVFID 217
+ + G+V A +FEEM CK + + + I Y G F + + + ++ + D
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 218 QHVLCSTLSACTALKAFSFGKSLHAIIVKFGF--EYETFIGNALTDLYSKSGDMVSASNV 275
+ L+ S + + + GF E ETF N L YS+ G A V
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF--NTLISAYSRCGSFEQAMTV 511
Query: 276 FQS--DSGCR-NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACAN 332
++ D+G ++ ++ ++ E++ ++ + +PNE T+ SL+ A AN
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN 571
Query: 333 QAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE----NPNDTA 388
++ L +V + + LV + KC L + + F E++ +P+ T
Sbjct: 572 GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 389 WNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHA---GMVEDGLNYFY 445
N++V ++ + + A + M +RG P+ T+ +L+ S + G E+ L
Sbjct: 632 LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL 691
Query: 446 SMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMP---FEPTAFGWCSFLGA 498
+ G+ P YN +I R ++++ + M P + +F+G+
Sbjct: 692 AK----GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/411 (20%), Positives = 174/411 (42%), Gaps = 52/411 (12%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLP--CTFLTNHLLNLYSKCGELDYAIKLFDRMS- 78
L+ +A ++ + ++ GC P CTF N + +Y G+ +K+FD ++
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTF--NAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 79 ---KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQF 135
++V+W ++ F ++ E F +M+ G + ++++ A + GS +
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQ 507
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP---CK-DEVLWTSMID 191
+ V+ ++ +G +L + + ++ G + KV EM CK +E+ + S++
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH 567
Query: 192 GYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTL----SACTAL----KAFSFGK----- 238
Y NG + + + V V + VL TL S C L +AFS K
Sbjct: 568 AYA-NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFS 626
Query: 239 ----SLHAIIVKF-------------------GFEYETFIGNALTDLYSKSGDMVSASNV 275
+L++++ + GF N+L ++S+S D + +
Sbjct: 627 PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI 686
Query: 276 FQS--DSGCR-NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACAN 332
+ G + +I+S+ ++ Y ++ A F ++RNSGI P+ T+++ I + A
Sbjct: 687 LREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAA 746
Query: 333 QAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN 383
+ E + ++K + +++VD Y K D + +++ N
Sbjct: 747 DSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/504 (21%), Positives = 216/504 (42%), Gaps = 19/504 (3%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM 82
I + ++ + +L +++ G P N +++ CG D A ++M +R M
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 83 ----VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ 138
++++ ++ G R+ R +A +M +G + ++++ + GS+ ++
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPC----KDEVLWTSMIDGYV 194
+ L+V G + L Y K G+ +A ++ +EM ++ +TS+I
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+ F+ AL +M+ N+ +L + +S S L + GF +T
Sbjct: 447 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 506
Query: 255 IGNALTDLYSKSGDMVSASNVFQS--DSGC-RNIVSFTAIVDGYVEMDQLEKALNAFIDL 311
NAL ++G + A + + GC + VS+ ++ G +L++A ++
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 566
Query: 312 RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLF 371
G++P+ +T+S LI N K+E + D + S ++D K
Sbjct: 567 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 626
Query: 372 DHSIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNL 427
+ + FDE+ + PN +N L+ + + G A+E +M +G+ PN+ T+ +L
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 428 LKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM---P 484
+KG S VE+ F M ++ G+ P HY +ID G+ G++ +VE + M
Sbjct: 687 IKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 485 FEPTAFGWCSFLGACKTHGDKERA 508
P + +G G+ A
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEA 769
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 191/464 (41%), Gaps = 34/464 (7%)
Query: 21 QLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS-- 78
LI + +A L+K ++ ++ G + N L+ Y K G+ D A +L M
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 79 --KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFG 136
N S+T++I L F AL +M + L++++ G
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 137 VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDG 192
+++ + GF + + L + G++ +A ++ +E+ + D V + ++I G
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQH----VLCSTLSACTALKAFSFGKSLHAIIVKFG 248
++A + +MV + D + ++C + +A F + G
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK----RNG 605
Query: 249 FEYETFIGNALTDLYSKSGDMVSASNVF---QSDSGCRNIVSFTAIVDGYVEMDQLEKAL 305
+ + + + D K+ F S + N V + ++ Y +L AL
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 306 NAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMY 365
D+++ GI PN T++SLIK + +++E LL ++ + + F +AL+D Y
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 366 GKCGLFDHSIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNA 421
GK G L E+ + PN + ++G +A+ G A NEM ++G+ P++
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Query: 422 VTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIID 465
+T+ + G G V L F D EE+Y II+
Sbjct: 786 ITYKEFIYGYLKQGGV---LEAFKGSD--------EENYAAIIE 818
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 181/434 (41%), Gaps = 58/434 (13%)
Query: 101 ALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTD 160
ALD F + +G S+ + +L + Q + +V K G +++L + +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 268
Query: 161 MYSKCGEVSDACKVFEEMP----CKDEVLWTSMIDGYVKNGNFEKALIAYKKMV---TDN 213
+ K G+V +A K+F +M + V + ++IDG G +++A + +KMV +
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 214 VFIDQHVLCSTLSACTALKAFSFGKSLHAI--IVKFGFEYETFIGNALTDLYSKSGDM-- 269
I +L L+ +A G + + + K GF + N L D + ++G +
Sbjct: 329 TLITYSILVKGLT-----RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 270 -VSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIK 328
+ ++ S ++ ++ GY + Q + A ++ + G N+ +F+S+I
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 329 ACANQAKLEH----------------GSLL---------HGQVVK-----FNFDRDPFV- 357
+ + G LL HG+ K F F FV
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 503
Query: 358 ----SSALVDMYGKCGLFDHSIQLFDEIENP----NDTAWNTLVGVFAQHGLGRNAIETF 409
S+AL+ + G D + ++ EI + ++NTL+ A
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 410 NEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGR 469
+EMV RGLKP+ T+ L+ G + VE+ + F+ K G++P Y+ +ID +
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ-FWDDCKRNGMLPDVYTYSVMIDGCCK 622
Query: 470 AGKLKEVEDFINSM 483
A + +E ++F + M
Sbjct: 623 AERTEEGQEFFDEM 636
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/341 (19%), Positives = 131/341 (38%), Gaps = 48/341 (14%)
Query: 7 FRFRHK--LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKC 64
F+F +K + D++ L+ +A +L + ++ +++ GC+ N L++
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553
Query: 65 GELDYAIKLFDRMSKRNM----VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFAL 120
+LD A D M KR + +++ +I G F + EA+ + + G +
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 121 SSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPC 180
S ++ C + G + ++ + ++L Y + G +S A ++ E+M
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 181 K----DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSF 236
K + +TS+I G E+A + +++M +
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME------------------------ 709
Query: 237 GKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQ---SDSGCRNIVSFTAIVD 293
G E F AL D Y K G MV + + S + N +++T ++
Sbjct: 710 -----------GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 758
Query: 294 GYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQA 334
GY + +A ++R GI P+ T+ I Q
Sbjct: 759 GYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/504 (21%), Positives = 216/504 (42%), Gaps = 19/504 (3%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM 82
I + ++ + +L +++ G P N +++ CG D A ++M +R M
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 83 ----VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ 138
++++ ++ G R+ R +A +M +G + ++++ + GS+ ++
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPC----KDEVLWTSMIDGYV 194
+ L+V G + L Y K G+ +A ++ +EM ++ +TS+I
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
+ F+ AL +M+ N+ +L + +S S L + GF +T
Sbjct: 447 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 506
Query: 255 IGNALTDLYSKSGDMVSASNVFQS--DSGC-RNIVSFTAIVDGYVEMDQLEKALNAFIDL 311
NAL ++G + A + + GC + VS+ ++ G +L++A ++
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 566
Query: 312 RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLF 371
G++P+ +T+S LI N K+E + D + S ++D K
Sbjct: 567 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 626
Query: 372 DHSIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNL 427
+ + FDE+ + PN +N L+ + + G A+E +M +G+ PN+ T+ +L
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 428 LKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM---P 484
+KG S VE+ F M ++ G+ P HY +ID G+ G++ +VE + M
Sbjct: 687 IKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 485 FEPTAFGWCSFLGACKTHGDKERA 508
P + +G G+ A
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEA 769
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 191/464 (41%), Gaps = 34/464 (7%)
Query: 21 QLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS-- 78
LI + +A L+K ++ ++ G + N L+ Y K G+ D A +L M
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 79 --KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFG 136
N S+T++I L F AL +M + L++++ G
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 137 VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDG 192
+++ + GF + + L + G++ +A ++ +E+ + D V + ++I G
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQH----VLCSTLSACTALKAFSFGKSLHAIIVKFG 248
++A + +MV + D + ++C + +A F + G
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK----RNG 605
Query: 249 FEYETFIGNALTDLYSKSGDMVSASNVF---QSDSGCRNIVSFTAIVDGYVEMDQLEKAL 305
+ + + + D K+ F S + N V + ++ Y +L AL
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 306 NAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMY 365
D+++ GI PN T++SLIK + +++E LL ++ + + F +AL+D Y
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 366 GKCGLFDHSIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNA 421
GK G L E+ + PN + ++G +A+ G A NEM ++G+ P++
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Query: 422 VTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIID 465
+T+ + G G V L F D EE+Y II+
Sbjct: 786 ITYKEFIYGYLKQGGV---LEAFKGSD--------EENYAAIIE 818
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 181/434 (41%), Gaps = 58/434 (13%)
Query: 101 ALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTD 160
ALD F + +G S+ + +L + Q + +V K G +++L + +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 268
Query: 161 MYSKCGEVSDACKVFEEMP----CKDEVLWTSMIDGYVKNGNFEKALIAYKKMV---TDN 213
+ K G+V +A K+F +M + V + ++IDG G +++A + +KMV +
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 214 VFIDQHVLCSTLSACTALKAFSFGKSLHAI--IVKFGFEYETFIGNALTDLYSKSGDM-- 269
I +L L+ +A G + + + K GF + N L D + ++G +
Sbjct: 329 TLITYSILVKGLT-----RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 270 -VSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIK 328
+ ++ S ++ ++ GY + Q + A ++ + G N+ +F+S+I
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 329 ACANQAKLEH----------------GSLL---------HGQVVK-----FNFDRDPFV- 357
+ + G LL HG+ K F F FV
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 503
Query: 358 ----SSALVDMYGKCGLFDHSIQLFDEIENP----NDTAWNTLVGVFAQHGLGRNAIETF 409
S+AL+ + G D + ++ EI + ++NTL+ A
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 410 NEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGR 469
+EMV RGLKP+ T+ L+ G + VE+ + F+ K G++P Y+ +ID +
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ-FWDDCKRNGMLPDVYTYSVMIDGCCK 622
Query: 470 AGKLKEVEDFINSM 483
A + +E ++F + M
Sbjct: 623 AERTEEGQEFFDEM 636
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/341 (19%), Positives = 131/341 (38%), Gaps = 48/341 (14%)
Query: 7 FRFRHK--LCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKC 64
F+F +K + D++ L+ +A +L + ++ +++ GC+ N L++
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553
Query: 65 GELDYAIKLFDRMSKRNM----VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFAL 120
+LD A D M KR + +++ +I G F + EA+ + + G +
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 121 SSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPC 180
S ++ C + G + ++ + ++L Y + G +S A ++ E+M
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 181 K----DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSF 236
K + +TS+I G E+A + +++M +
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME------------------------ 709
Query: 237 GKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQ---SDSGCRNIVSFTAIVD 293
G E F AL D Y K G MV + + S + N +++T ++
Sbjct: 710 -----------GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 758
Query: 294 GYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQA 334
GY + +A ++R GI P+ T+ I Q
Sbjct: 759 GYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 136/568 (23%), Positives = 236/568 (41%), Gaps = 106/568 (18%)
Query: 16 SKAVAQLIQTC-------AQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELD 68
+K +A I C A+A + KQ+ L G +P + N ++ YSK GE+D
Sbjct: 461 TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEID 520
Query: 69 YAIKLFDRMSKR----NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVL 124
AIKL M + +++ ++I +++ R EA F +M+ + +++L
Sbjct: 521 EAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLL 580
Query: 125 QACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVF---EEMPCK 181
G IQ +++ +V+ G + L D K EV+ A K+ +M C
Sbjct: 581 AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 640
Query: 182 DEVL-WTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSL 240
+V + ++I G VKNG ++A+ + +M V+ D LC+ L +KA S +
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPG--VVKA-SLIEDA 696
Query: 241 HAIIVKFGFE---------YETFIGNALTDL----------------------------- 262
+ II F + +E IG+ L +
Sbjct: 697 YKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPII 756
Query: 263 -YSKSGDMVSASNV----FQSDSGCR-NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI 316
YS + VS + F D G + + ++ ++ G +E D +E A + F+ ++++G
Sbjct: 757 RYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGC 816
Query: 317 EPNEFTFSSLIKACANQAKLE--------------------HGSLLHGQVVKFNF----- 351
P+ T++ L+ A K++ H ++ G V N
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Query: 352 -------DRDPFVSSA-----LVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNTLVGV 395
DRD F +A L+D K G + QLF+ + + PN +N L+
Sbjct: 877 LYYDLMSDRD-FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 396 FAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMP 455
F + G A F MV G++P+ T+ L+ G V++GL+YF + K G+ P
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL-KESGLNP 994
Query: 456 REEHYNCIIDLLGRAGKLKEVEDFINSM 483
YN II+ LG++ +L+E N M
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 105/481 (21%), Positives = 196/481 (40%), Gaps = 37/481 (7%)
Query: 55 NHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLR----FREALDTFCQMRA 110
N++L G+L+ +FD M KR + T F+SL ++A +MR
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 111 EGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSD 170
G + ++ + ++ ++V+ ++ GF L S+L K ++
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 171 ACKVFEEMPC----KDEVLWTSMIDGYVKNGNFEKALIAYKKM---------VTDNVFID 217
+ +EM + +T I + G +A K+M VT V ID
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 218 QHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVF- 276
LC+ A + F K+ + + T+I L D +S + D+ S +
Sbjct: 302 --ALCTARKLDCAKEVFEKMKT-----GRHKPDRVTYI--TLLDRFSDNRDLDSVKQFWS 352
Query: 277 --QSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQA 334
+ D ++V+FT +VD + +A + +R+ GI PN T+++LI
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 335 KLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWN 390
+L+ L G + + +D YGK G +++ F++++ PN A N
Sbjct: 413 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 472
Query: 391 TLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKI 450
+ A+ G R A + F + D GL P++VT+ ++K S G +++ + M +
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME- 531
Query: 451 YGVMPREEHYNCIIDLLGRAGKLKEVEDF---INSMPFEPTAFGWCSFLGACKTHGDKER 507
G P N +I+ L +A ++ E + M +PT + + L +G +
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 508 A 508
A
Sbjct: 592 A 592
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 113/536 (21%), Positives = 218/536 (40%), Gaps = 30/536 (5%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
L+ + ++ + +L +++ GC P T N L + K E+ A+K+ +M
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 82 MV----SWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQAC--ASLGSIQF 135
V ++ +I G ++ + +EA+ F QM+ + L ++L ASL +
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAY 697
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCG---EVSDACKVFEEMPCKD-EVLWTSMID 191
+ + L + LF + + ++ G VS + ++ C+D + + +I
Sbjct: 698 KIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 757
Query: 192 GYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKA--FSFGKSLHAIIVKFGF 249
K+ N A ++K T ++ + + L L+A + + + G
Sbjct: 758 YSCKHNNVSGARTLFEKF-TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGC 816
Query: 250 EYETFIGNALTDLYSKSGDMVSASNVFQ--SDSGCR-NIVSFTAIVDGYVEMDQLEKALN 306
+ N L D Y KSG + +++ S C N ++ ++ G V+ ++ AL+
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Query: 307 AFIDL-RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMY 365
+ DL + P T+ LI + +L L ++ + + + + L++ +
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 366 GKCGLFDHSIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNA 421
GK G D + LF + P+ ++ LV G + F E+ + GL P+
Sbjct: 937 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDV 996
Query: 422 VTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFIN 481
V + ++ G + +E+ L F M G+ P YN +I LG AG ++E N
Sbjct: 997 VCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYN 1056
Query: 482 SMP---FEPTAFGWCSFLGACKTHGDKERAKLAAYKLM---KLEPENSGAHVLLSN 531
+ EP F + + + G E A A Y+ M P N+G + L N
Sbjct: 1057 EIQRAGLEPNVFTFNALIRGYSLSGKPEHA-YAVYQTMVTGGFSP-NTGTYEQLPN 1110
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/529 (18%), Positives = 196/529 (37%), Gaps = 60/529 (11%)
Query: 10 RHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDY 69
RHK D L+ + ++L KQ +++ + G +P L++ K G
Sbjct: 323 RHK-PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGE 381
Query: 70 AIKLFDRMSKR----NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQ 125
A D M + N+ ++ +I G R R +AL+ F M + G + + +
Sbjct: 382 AFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFID 441
Query: 126 ACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP----CK 181
G ++ + G + + +K G +A ++F +
Sbjct: 442 YYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP 501
Query: 182 DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLH 241
D V + M+ Y K G ++A+ +M+ + D V+ S ++ +
Sbjct: 502 DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF 561
Query: 242 AIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS--DSGCR-NIVSFTAIVDGYVEM 298
+ + + N L K+G + A +F+ GC N ++F + D +
Sbjct: 562 MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN 621
Query: 299 DQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS 358
D++ AL + + G P+ FT++++I +++ Q+ K + D
Sbjct: 622 DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP-DFVTL 680
Query: 359 SALVDMYGKCGLFDHSIQ-----LFDEIENPNDTAWNTLVG-VFAQHGL----------- 401
L+ K L + + + L++ + P + W L+G + A+ G+
Sbjct: 681 CTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLV 740
Query: 402 ---------------------------GRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHA 434
R E F + D G++P T+ L+ G A
Sbjct: 741 ANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK--DLGVQPKLPTYNLLIGGLLEA 798
Query: 435 GMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
M+E + F + K G +P YN ++D G++GK+ E+ + M
Sbjct: 799 DMIEIAQDVFLQV-KSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/443 (17%), Positives = 184/443 (41%), Gaps = 20/443 (4%)
Query: 23 IQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS---- 78
I+ +A ++++ ++ ++ GC P L++ +LD A ++F++M
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH 324
Query: 79 KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQ 138
K + V++ ++ F + + +M +G + ++ A G+
Sbjct: 325 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 384
Query: 139 VHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPC----KDEVLWTSMIDGYV 194
++ G L + L + + DA ++F M + ID Y
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
K+G+ AL ++KM T + + ++L + K + + G ++
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Query: 255 IGNALTDLYSKSGDMVSASNVFQS--DSGCR-NIVSFTAIVDGYVEMDQLEKALNAFIDL 311
N + YSK G++ A + ++GC +++ ++++ + D++++A F+ +
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 312 RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLF 371
+ ++P T+++L+ K++ L +V+ + + L D K
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Query: 372 DHSIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNL 427
++++ ++ + P+ +NT++ ++G + A+ F++M + + P+ VT L
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTL 683
Query: 428 LKGCSHAGMVEDG----LNYFYS 446
L G A ++ED N+ Y+
Sbjct: 684 LPGVVKASLIEDAYKIITNFLYN 706
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/510 (21%), Positives = 205/510 (40%), Gaps = 50/510 (9%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D +I +A L + ++ L + +PCT+ N ++ Y G+ D A L
Sbjct: 272 DEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
Query: 75 DRMSKR----NMVSWTAMITGFFRSLRFREALDTFCQMRAE------------------G 112
+R + +++++ ++T + + EAL F +M+ + G
Sbjct: 332 ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAG 391
Query: 113 ETASQFALSSVLQACA---SLGSIQFGVQVHCLVVKSGFGCELFLGSN------------ 157
+ + F L +Q ++ ++ V C K C +F +
Sbjct: 392 KLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFC 451
Query: 158 -LTDMYSKCGEVSDACKVFEEM---PCK-DEVLWTSMIDGYVKNGNFEKALIAYKKMVTD 212
L D K G V DA KV+E+M C+ + +++TS+I + +G E YK M+
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 213 NVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSA 272
N D +L + + G+++ I F + + L K+G
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571
Query: 273 SNVFQS--DSGC-RNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKA 329
+F S + GC + ++ ++DG+ + ++ KA +++ G EP T+ S+I
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 330 CANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE----NPN 385
A +L+ +L + + + + S+L+D +GK G D + + +E+ PN
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 386 DTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFY 445
WN+L+ + A+ F M + PN VT+ L+ G ++
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 446 SMDKIYGVMPREEHYNCIIDLLGRAGKLKE 475
M K G+ P Y +I L +AG + E
Sbjct: 752 EMQK-QGMKPSTISYTTMISGLAKAGNIAE 780
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 88/193 (45%), Gaps = 5/193 (2%)
Query: 287 SFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQV 346
++T ++ + ++ + L F ++ G EP F++LI+ A + +++ L ++
Sbjct: 170 AYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM 229
Query: 347 VKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE----NPNDTAWNTLVGVFAQHGLG 402
+ D D + + +D +GK G D + + F EIE P++ + +++GV +
Sbjct: 230 KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRL 289
Query: 403 RNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNC 462
A+E F + P + ++ G AG ++ + + G +P YNC
Sbjct: 290 DEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS-LLERQRAKGSIPSVIAYNC 348
Query: 463 IIDLLGRAGKLKE 475
I+ L + GK+ E
Sbjct: 349 ILTCLRKMGKVDE 361
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 88/475 (18%), Positives = 179/475 (37%), Gaps = 50/475 (10%)
Query: 71 IKLFDRMSKRNMVSWTAMITGFFRSLRFREALDT-FCQMRAEGETASQFALSSVLQACAS 129
+++ + R S + G F ++ + + T F QM+ G + +++++ A
Sbjct: 156 VQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAK 215
Query: 130 LGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVL 185
G + + + + S ++ L + D + K G+V A K F E+ DEV
Sbjct: 216 EGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVT 275
Query: 186 WTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIV 245
+TSMI K ++A+ ++ + + + + + + F SL
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 246 KFGFEYETFIGNALTDLYSKSGDMVSASNVFQS--DSGCRNIVSFTAIVDGYVEMDQLEK 303
G N + K G + A VF+ N+ ++ ++D +L+
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 304 ALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVD 363
A ++ +G+ PN T + ++ KL+ + ++ D +L+D
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 364 MYGKCGLFDHSIQLFDEIENP----NDTAWNTLVGVFAQHGLGRNAIETFNEMVD----- 414
GK G D + ++++++ + N + +L+ F HG + + + +M++
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 415 ------------------------------RGLKPNAVTFVNLLKGCSHAGMVEDGLNYF 444
R P+A ++ L+ G AG + F
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF 575
Query: 445 YSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMP---FEPTAFGWCSFL 496
YSM K G + YN +ID + GK+ + + M FEPT + S +
Sbjct: 576 YSM-KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/457 (18%), Positives = 170/457 (37%), Gaps = 50/457 (10%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKR- 80
LI +A +L +L + + G P N +++ K +LD A +F+ M +
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 81 ---NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
+ +++ ++I G + R +A + +M + +S+++ + G + G
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGY 193
+++ ++ +L L + D K GE +FEE+ + D ++ +I G
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 194 VKNGNFEKALIAYKKM-----VTD----NVFIDQHVLCSTLSACTALKAFSFGKSLHAII 244
+K G + + M V D N+ ID C ++ L K +
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 245 VKFG--------------------------FEYETFIGNALTDLYSKSGDMVSASNVFQ- 277
V +G E I ++L D + K G + A + +
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 278 --SDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAK 335
N+ ++ +++D V+ +++ +AL F ++ PN+ T+ LI K
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Query: 336 LEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNT 391
+ ++ K + ++ K G + LFD + P+ +N
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802
Query: 392 LVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLL 428
++ + +A F E RGL + T V LL
Sbjct: 803 MIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/350 (19%), Positives = 151/350 (43%), Gaps = 47/350 (13%)
Query: 10 RHKLCDSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDY 69
R + D+++ + LI +A ++ +L + GC+ T N +++ + KCG+++
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 70 AIKLFDRMSKR----NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQ 125
A +L + M + +V++ ++I G + R EA F + +++ + SS++
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 126 ACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFE---EMPC-K 181
+G I + +++ G L+ ++L D K E+++A F+ E+ C
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 182 DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLH 241
++V + +I+G K F KA + +++M Q + ST+S T +
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQK------QGMKPSTISYTTMISGL------- 772
Query: 242 AIIVKFGFEYETFIGNALTDLYSKSGDMVSASNV---FQSDSGCRNIVSFTAIVDGYVEM 298
+K+G++ A + F+++ G + + A+++G
Sbjct: 773 ----------------------AKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810
Query: 299 DQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVK 348
++ A + F + R G+ + T L+ LE +++ G V++
Sbjct: 811 NRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIV-GAVLR 859
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 174/390 (44%), Gaps = 17/390 (4%)
Query: 56 HLLNLYSKCGELDYAIKLFDRMSKR----NMVSWTAMITGFFRSLRFREALDTFCQMRAE 111
+L L C + AI +F + N+ S+ +I + R +EA M +
Sbjct: 216 YLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK 275
Query: 112 GETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDA 171
G T + S+V+ G + ++ ++ + G ++ ++ + + ++++A
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 172 CKVFEEMP----CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSA 227
+ F EM D V++T++IDG+ K G+ A + +M + ++ D + +S
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 228 -CTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS--DSGCR- 283
C GK H + K G E ++ L + Y K+G M A V +GC
Sbjct: 396 FCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 284 NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLH 343
N+V++T ++DG + L+ A ++ G++PN FT++S++ +E L
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 344 GQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEI----ENPNDTAWNTLVGVFAQH 399
G+ + D + L+D Y K G D + ++ E+ P +N L+ F H
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 400 GLGRNAIETFNEMVDRGLKPNAVTFVNLLK 429
G+ + + N M+ +G+ PNA TF +L+K
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 169/409 (41%), Gaps = 50/409 (12%)
Query: 31 ELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM----VSWT 86
+L++ ++ +++IR G LP T + L++ + K G++ A K F M R++ +++T
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 87 AMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKS 146
A+I+GF + EA F +M +G + ++ G ++ +VH ++++
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 147 GFGCELFLGSNLTDMYSKCGEVSDACKVFEEM----PCKDEVLWTSMIDGYVKNGNFEKA 202
G + + L D K G++ A ++ EM + + S+++G K+GN E+A
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 203 LIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDL 262
+ K+V + G +T L D
Sbjct: 511 V----KLVGE-------------------------------FEAAGLNADTVTYTTLMDA 535
Query: 263 YSKSGDMVSASNVFQSDSG---CRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPN 319
Y KSG+M A + + G IV+F +++G+ LE + GI PN
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 320 EFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFD 379
TF+SL+K + L+ + ++ + D LV + K + LF
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 380 EIENP----NDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTF 424
E++ + + ++ L+ F + A E F++M GL + F
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 135/329 (41%), Gaps = 29/329 (8%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D +I Q ++ + +L ++ G P + L+N Y K G + A ++
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 75 DRMSKR----NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
+ M + N+V++T +I G + A + +M G + F +S++
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 131 GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLW 186
G+I+ V++ +G + + L D Y K GE+ A ++ +EM K V +
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 187 TSMIDGYVKNGNFEKALIAYKKMV---------TDNVFIDQHVLCSTLSACTALKAFSFG 237
+++G+ +G E M+ T N + Q+ + + L A TA+ +
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI----YK 620
Query: 238 KSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSG---CRNIVSFTAIVDG 294
+ G YE + + K+ +M A +FQ G ++ +++ ++ G
Sbjct: 621 DMCSRGVGPDGKTYENLVKG-----HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 295 YVEMDQLEKALNAFIDLRNSGIEPNEFTF 323
+++ + +A F +R G+ ++ F
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEIF 704
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 174/390 (44%), Gaps = 17/390 (4%)
Query: 56 HLLNLYSKCGELDYAIKLFDRMSKR----NMVSWTAMITGFFRSLRFREALDTFCQMRAE 111
+L L C + AI +F + N+ S+ +I + R +EA M +
Sbjct: 216 YLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK 275
Query: 112 GETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDA 171
G T + S+V+ G + ++ ++ + G ++ ++ + + ++++A
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 172 CKVFEEMP----CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSA 227
+ F EM D V++T++IDG+ K G+ A + +M + ++ D + +S
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 228 -CTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS--DSGCR- 283
C GK H + K G E ++ L + Y K+G M A V +GC
Sbjct: 396 FCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 284 NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLH 343
N+V++T ++DG + L+ A ++ G++PN FT++S++ +E L
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 344 GQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEI----ENPNDTAWNTLVGVFAQH 399
G+ + D + L+D Y K G D + ++ E+ P +N L+ F H
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 400 GLGRNAIETFNEMVDRGLKPNAVTFVNLLK 429
G+ + + N M+ +G+ PNA TF +L+K
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 169/409 (41%), Gaps = 50/409 (12%)
Query: 31 ELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM----VSWT 86
+L++ ++ +++IR G LP T + L++ + K G++ A K F M R++ +++T
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 87 AMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKS 146
A+I+GF + EA F +M +G + ++ G ++ +VH ++++
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 147 GFGCELFLGSNLTDMYSKCGEVSDACKVFEEM----PCKDEVLWTSMIDGYVKNGNFEKA 202
G + + L D K G++ A ++ EM + + S+++G K+GN E+A
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 203 LIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDL 262
+ K+V + G +T L D
Sbjct: 511 V----KLVGE-------------------------------FEAAGLNADTVTYTTLMDA 535
Query: 263 YSKSGDMVSASNVFQSDSG---CRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPN 319
Y KSG+M A + + G IV+F +++G+ LE + GI PN
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 320 EFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFD 379
TF+SL+K + L+ + ++ + D LV + K + LF
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 380 EIENP----NDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTF 424
E++ + + ++ L+ F + A E F++M GL + F
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 135/329 (41%), Gaps = 29/329 (8%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D +I Q ++ + +L ++ G P + L+N Y K G + A ++
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 75 DRMSKR----NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
+ M + N+V++T +I G + A + +M G + F +S++
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 131 GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLW 186
G+I+ V++ +G + + L D Y K GE+ A ++ +EM K V +
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 187 TSMIDGYVKNGNFEKALIAYKKMV---------TDNVFIDQHVLCSTLSACTALKAFSFG 237
+++G+ +G E M+ T N + Q+ + + L A TA+ +
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI----YK 620
Query: 238 KSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSG---CRNIVSFTAIVDG 294
+ G YE + + K+ +M A +FQ G ++ +++ ++ G
Sbjct: 621 DMCSRGVGPDGKTYENLVKG-----HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 295 YVEMDQLEKALNAFIDLRNSGIEPNEFTF 323
+++ + +A F +R G+ ++ F
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEIF 704
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 119/521 (22%), Positives = 211/521 (40%), Gaps = 48/521 (9%)
Query: 6 LFRFRHKLCDSKAV--AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSK 63
L R R C V + L+ C K+L + K++ ++ GC P + N L++ Y
Sbjct: 325 LNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT 384
Query: 64 CGELDYAIKLFDRMSK-RNMVSWTAM------ITGFFRSLR---FREALDTFCQMRAEGE 113
G+ YA KL +M K +M + I G SL A + +M A G
Sbjct: 385 SGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGV 444
Query: 114 TASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACK 173
++ +SS + S G + V ++ GF + S + + ++ A
Sbjct: 445 VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504
Query: 174 VFEEMP----CKDEVLWTSMIDGYVKNGNFEKALIAYKKM----VTDNVFIDQHVLCSTL 225
+FEEM D +T M+D + K G E+A + +M T NV ++ + L
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 226 SACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCR-- 283
A K S+ L ++ G +AL D + K+G + A +F+ G +
Sbjct: 565 KA----KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620
Query: 284 -----------------NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSL 326
N+V++ A++DG+ + ++E+A + G EPN+ + +L
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680
Query: 327 IKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDE-IEN-- 383
I KL+ + ++ + F + S+L+D Y K D + ++ + +EN
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740
Query: 384 -PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLN 442
PN + ++ + G A + M ++G +PN VT+ ++ G G +E L
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 443 YFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
M GV P Y +ID + G L + + M
Sbjct: 801 LLERMGS-KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 123/549 (22%), Positives = 227/549 (41%), Gaps = 57/549 (10%)
Query: 7 FRFRHKLCDSKAVAQ-LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCG 65
FRFR S++ LIQ +A L +H ++ F K G
Sbjct: 229 FRFR----PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG 284
Query: 66 ELDYAIKLFDRMS-KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVL 124
+ A+ L + + + V +T +I+G + F EA+D +MRA + S++L
Sbjct: 285 KWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344
Query: 125 QACASLGSIQFGVQVHCLVVKSGFGC----ELFLGSNLTDMYSKCGEVSDACKVFEEM-P 179
C L Q G L + GC ++F ++L Y G+ S A K+ ++M
Sbjct: 345 --CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF--NSLVHAYCTSGDHSYAYKLLKKMVK 400
Query: 180 C---KDEVLWTSMIDGYVKNGN------FEKALIAYKKMVTDNVFIDQ-HVLCSTLSACT 229
C V++ +I + + + A AY +M+ V +++ +V T C+
Sbjct: 401 CGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCS 460
Query: 230 A---LKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS---DSGCR 283
A KAFS + + + GF +T + + + + M A +F+
Sbjct: 461 AGKYEKAFSVIREM----IGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVA 516
Query: 284 NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLH 343
++ ++T +VD + + +E+A F ++R G PN T+++LI A K+ + + L
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 344 GQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGR 403
++ + SAL+D + K G + + Q+F+ + D
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP--------------- 621
Query: 404 NAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCI 463
+ F + D +PN VT+ LL G + VE+ +M + G P + Y+ +
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM-SMEGCEPNQIVYDAL 680
Query: 464 IDLLGRAGKLKEVEDFINSMP---FEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEP 520
ID L + GKL E ++ M F T + + S + + +R LA+ L K+
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI---DRYFKVKRQDLASKVLSKMLE 737
Query: 521 ENSGAHVLL 529
+ +V++
Sbjct: 738 NSCAPNVVI 746
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 88/227 (38%), Gaps = 13/227 (5%)
Query: 246 KFGFEYETFIGNALTDLYSKSGDMVSASNVFQS--DSGCRNIVSF-TAIVDGYVEMDQLE 302
+ G+++ + NAL DL + D Q D F +V +
Sbjct: 158 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFS 217
Query: 303 KALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALV 362
AL L++ P+ T++ LI+A +L+ SL+H ++ N D F
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 277
Query: 363 DMYGKCGLFDHSIQLFDEIEN--PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPN 420
K G + ++ L E EN P+ + L+ + L A++ N M PN
Sbjct: 278 YSLCKVGKWREALTLV-ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 336
Query: 421 AVTFVNLLKGC---SHAGMVEDGLNYFYSMDKIYGVMPREEHYNCII 464
VT+ LL GC G + LN M + G P + +N ++
Sbjct: 337 VVTYSTLLCGCLNKKQLGRCKRVLN----MMMMEGCYPSPKIFNSLV 379
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 137/306 (44%), Gaps = 7/306 (2%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
L + A+ + +L +++ P N LL ++ CG LD ++FDRM R+
Sbjct: 94 LAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRD 153
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETAS----QFALSSVLQACASLGSIQFGV 137
SW + G + +A F M + + + L VL+ACA + + G
Sbjct: 154 FHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGK 213
Query: 138 QVHCLVVKSGFGCE--LFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVK 195
QVH L K GF E +L +L Y + + DA V ++ + V W + + +
Sbjct: 214 QVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYR 273
Query: 196 NGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALK-AFSFGKSLHAIIVKFGFEYETF 254
G F++ + + +M + + V + L AC+ + G+ +HA +K GFE +
Sbjct: 274 EGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCL 333
Query: 255 IGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
I L ++Y K G + A VF+S ++ + A+V Y++ +A+ ++ +
Sbjct: 334 IRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKAT 393
Query: 315 GIEPNE 320
GI+ ++
Sbjct: 394 GIKAHD 399
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 141/292 (48%), Gaps = 11/292 (3%)
Query: 137 VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKN 196
+QVH ++KS + + L M+ CG + ++F+ MP +D W + G ++
Sbjct: 110 LQVH--IMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEM 167
Query: 197 GNFEKALIAYKKMVTDN----VFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF--E 250
G++E A + M+ + I +L L AC ++ F GK +HA+ K GF E
Sbjct: 168 GDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDE 227
Query: 251 YETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID 310
++++ +L Y + + A+ V S N V++ A V + ++ + FI+
Sbjct: 228 EDSYLSGSLIRFYGEFRCLEDANLVLHQLSNA-NTVAWAAKVTNDYREGEFQEVIRDFIE 286
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKL-EHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCG 369
+ N GI+ N FS+++KAC+ + G +H +K F+ D + L++MYGK G
Sbjct: 287 MGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYG 346
Query: 370 LFDHSIQLFDEIENPNDTA-WNTLVGVFAQHGLGRNAIETFNEMVDRGLKPN 420
+ ++F ++ + WN +V + Q+G+ AI+ +M G+K +
Sbjct: 347 KVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAH 398
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 34/241 (14%)
Query: 283 RNIVSFTAIVDGYVEMDQLEKALNAFIDL----RNSGIEPNEFTFSSLIKACANQAKLEH 338
R+ S+ + G +EM E A F+ + + + + ++KACA E
Sbjct: 152 RDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFEL 211
Query: 339 GSLLHGQVVKFNF--DRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVF 396
G +H K F + D ++S +L+ YG+ + + + ++ N N AW V
Sbjct: 212 GKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTND 271
Query: 397 AQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPR 456
+ G + I F EM + G+K N F N+LK CS V DG G +
Sbjct: 272 YREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACS---WVSDG-----------GRSGQ 317
Query: 457 EEHYNCI--------------IDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTH 502
+ H N I I++ G+ GK+K+ E S E + W + + + +
Sbjct: 318 QVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQN 377
Query: 503 G 503
G
Sbjct: 378 G 378
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 178/424 (41%), Gaps = 84/424 (19%)
Query: 50 CTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMR 109
C + N LLN K ++ A+KLFD LRF+ DT
Sbjct: 170 CCMVVNSLLNTLVKLDRVEDAMKLFDE------------------HLRFQSCNDTK---- 207
Query: 110 AEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCE--LFLGSNLTDMYSKCGE 167
+ +++ +G + +++ L V SGFGCE + + L + K E
Sbjct: 208 ---------TFNILIRGLCGVGKAEKALEL--LGVMSGFGCEPDIVTYNTLIQGFCKSNE 256
Query: 168 VSDACKVFEEMPC-----KDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLC 222
++ A ++F+++ D V +TSMI GY K G +A
Sbjct: 257 LNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREA-------------------- 296
Query: 223 STLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS--DS 280
SL +++ G N L D Y+K+G+M++A +
Sbjct: 297 ---------------SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 281 GC-RNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHG 339
GC ++V+FT+++DGY + Q+ + + ++ G+ PN FT+S LI A N+ +L
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 340 SLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE----NPNDTAWNTLVGV 395
L GQ+ + PF+ + ++D + K G + + + +E+E P+ + L+
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Query: 396 FAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG--LNYFYSMDKIYGV 453
G A+ F++MV G P+ +T +LL AGM ++ LN + V
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNV 521
Query: 454 MPRE 457
+P E
Sbjct: 522 VPLE 525
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 122/288 (42%), Gaps = 16/288 (5%)
Query: 276 FQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAK 335
FQS C + +F ++ G + + EKAL + G EP+ T+++LI+ +
Sbjct: 200 FQS---CNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNE 256
Query: 336 LEHGSLLHGQVVKFNF-DRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWN 390
L S + V + D ++++ Y K G + L D++ P + +N
Sbjct: 257 LNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFN 316
Query: 391 TLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKI 450
LV +A+ G A E +M+ G P+ VTF +L+ G G V G + M+
Sbjct: 317 VLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA- 375
Query: 451 YGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFE---PTAFGWCSFL-GACKTHGDKE 506
G+ P Y+ +I+ L +L + + + + + P F + + G CK G
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKA-GKVN 434
Query: 507 RAKLAAYKL--MKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDG 552
A + ++ K +P+ +L+ K R +E V KM+ G
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 136/325 (41%), Gaps = 47/325 (14%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+K LI+ + K +L + GC P N L+ + K EL+ A ++F
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 75 D-----RMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACAS 129
+ ++V++T+MI+G+ ++ + REA SS+L
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREA-------------------SSLLDDMLR 305
Query: 130 LGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPC----KDEVL 185
LG V + LV D Y+K GE+ A ++ +M D V
Sbjct: 306 LGIYPTNVTFNVLV----------------DGYAKAGEMLTAEEIRGKMISFGCFPDVVT 349
Query: 186 WTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIV 245
+TS+IDGY + G + +++M +F + ++A + L +
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLA 409
Query: 246 KFGFEYETFIGNALTDLYSKSGDMVSASNVFQ--SDSGCR-NIVSFTAIVDGYVEMDQLE 302
+ F+ N + D + K+G + A+ + + C+ + ++FT ++ G+ ++
Sbjct: 410 SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF 469
Query: 303 KALNAFIDLRNSGIEPNEFTFSSLI 327
+A++ F + G P++ T SSL+
Sbjct: 470 EAVSIFHKMVAIGCSPDKITVSSLL 494
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 178/424 (41%), Gaps = 84/424 (19%)
Query: 50 CTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMR 109
C + N LLN K ++ A+KLFD LRF+ DT
Sbjct: 170 CCMVVNSLLNTLVKLDRVEDAMKLFDE------------------HLRFQSCNDTK---- 207
Query: 110 AEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCE--LFLGSNLTDMYSKCGE 167
+ +++ +G + +++ L V SGFGCE + + L + K E
Sbjct: 208 ---------TFNILIRGLCGVGKAEKALEL--LGVMSGFGCEPDIVTYNTLIQGFCKSNE 256
Query: 168 VSDACKVFEEMPC-----KDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLC 222
++ A ++F+++ D V +TSMI GY K G +A
Sbjct: 257 LNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREA-------------------- 296
Query: 223 STLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS--DS 280
SL +++ G N L D Y+K+G+M++A +
Sbjct: 297 ---------------SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 281 GC-RNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHG 339
GC ++V+FT+++DGY + Q+ + + ++ G+ PN FT+S LI A N+ +L
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 340 SLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE----NPNDTAWNTLVGV 395
L GQ+ + PF+ + ++D + K G + + + +E+E P+ + L+
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Query: 396 FAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG--LNYFYSMDKIYGV 453
G A+ F++MV G P+ +T +LL AGM ++ LN + V
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNV 521
Query: 454 MPRE 457
+P E
Sbjct: 522 VPLE 525
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 122/288 (42%), Gaps = 16/288 (5%)
Query: 276 FQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAK 335
FQS C + +F ++ G + + EKAL + G EP+ T+++LI+ +
Sbjct: 200 FQS---CNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNE 256
Query: 336 LEHGSLLHGQVVKFNF-DRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWN 390
L S + V + D ++++ Y K G + L D++ P + +N
Sbjct: 257 LNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFN 316
Query: 391 TLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKI 450
LV +A+ G A E +M+ G P+ VTF +L+ G G V G + M+
Sbjct: 317 VLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA- 375
Query: 451 YGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFE---PTAFGWCSFL-GACKTHGDKE 506
G+ P Y+ +I+ L +L + + + + + P F + + G CK G
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKA-GKVN 434
Query: 507 RAKLAAYKL--MKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDG 552
A + ++ K +P+ +L+ K R +E V KM+ G
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 136/325 (41%), Gaps = 47/325 (14%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+K LI+ + K +L + GC P N L+ + K EL+ A ++F
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 75 D-----RMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACAS 129
+ ++V++T+MI+G+ ++ + REA SS+L
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREA-------------------SSLLDDMLR 305
Query: 130 LGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPC----KDEVL 185
LG V + LV D Y+K GE+ A ++ +M D V
Sbjct: 306 LGIYPTNVTFNVLV----------------DGYAKAGEMLTAEEIRGKMISFGCFPDVVT 349
Query: 186 WTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIV 245
+TS+IDGY + G + +++M +F + ++A + L +
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLA 409
Query: 246 KFGFEYETFIGNALTDLYSKSGDMVSASNVFQ--SDSGCR-NIVSFTAIVDGYVEMDQLE 302
+ F+ N + D + K+G + A+ + + C+ + ++FT ++ G+ ++
Sbjct: 410 SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF 469
Query: 303 KALNAFIDLRNSGIEPNEFTFSSLI 327
+A++ F + G P++ T SSL+
Sbjct: 470 EAVSIFHKMVAIGCSPDKITVSSLL 494
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/527 (19%), Positives = 217/527 (41%), Gaps = 17/527 (3%)
Query: 49 PCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMV----SWTAMITGFFRSLRFREALDT 104
P F N +L + + D A LFD M +R + +++ +IT F + F AL
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 105 FCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSK 164
+M + + S++++ L + + + +SG +L +++ ++Y K
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 165 CGEVSDACKVFEEMP----CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHV 220
+A + +EM + V +++++ YV+N F +AL + +M N +D
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 221 LCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKS---GDMVSASNVFQ 277
+ L L + K E N + +Y ++ G+ + + Q
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 392
Query: 278 SDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLE 337
+N+V++ ++ Y + + EKA N ++++ GIEPN T+S++I KL+
Sbjct: 393 RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLD 452
Query: 338 HGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFA 397
+ L ++ + D + ++ Y + GL H+ +L E++ P++ T + + A
Sbjct: 453 RAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILA 512
Query: 398 QHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPRE 457
+ G A F + + G + F ++ S + + F M + G P
Sbjct: 513 KAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKM-RTAGYFPDS 571
Query: 458 EHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMK 517
+++ G+ + ++ + M E F + K+ ++ +
Sbjct: 572 NVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQR 631
Query: 518 LEPE---NSGA-HVLLSNIYAKERQWEDV-RCLRKMIRDGNMKKLPG 559
LE + NS H++++ +Y + + D R + +M G +K PG
Sbjct: 632 LESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKPFPG 678
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 193/462 (41%), Gaps = 22/462 (4%)
Query: 26 CAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMV-- 83
CA E+ L + + GC+P + + L++ SKC ++ A++L + M V
Sbjct: 228 CA-VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD 286
Query: 84 --SWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
++ +I G + R EA +M G ++ +G + +
Sbjct: 287 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFY 346
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP-----CKDEVLWTSMIDGYVKN 196
+ K E+ + + L + G + DA V +M D + S+I GY K
Sbjct: 347 RIPKP----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKE 402
Query: 197 GNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIG 256
G AL M + + + L ++ + G + T
Sbjct: 403 GLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462
Query: 257 NALTDLYSKSGDMVSASNVFQ--SDSGCR-NIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
N L + K + A +F+ GC+ ++ +F +++ G E+D+++ AL D+ +
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
G+ N T+++LI A + +++ L ++V D ++L+ + G D
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 374 SIQLFDEI----ENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLK 429
+ LF+++ P++ + N L+ + G+ A+E EMV RG P+ VTF +L+
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 430 GCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAG 471
G AG +EDGL F + + G+ P +N ++ L + G
Sbjct: 643 GLCRAGRIEDGLTMFRKL-QAEGIPPDTVTFNTLMSWLCKGG 683
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/471 (20%), Positives = 181/471 (38%), Gaps = 59/471 (12%)
Query: 101 ALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTD 160
A + F M + + F V++A ++ I + + + K G + L
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 161 MYSKCGEVSDACKVFEEM----PCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFI 216
SKC V++A ++ EEM D + +I G K +A +M+
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 217 DQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSA---- 272
D ++ + K L I K E I N L + G + A
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 273 SNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACAN 332
S++ S ++ ++ +++ GY + + AL D+RN G +PN ++++
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYT-------- 428
Query: 333 QAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE----NPNDTA 388
LVD + K G D + + +E+ PN
Sbjct: 429 ---------------------------ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 389 WNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMD 448
+N L+ F + A+E F EM +G KP+ TF +L+ G ++ L M
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 449 KIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSF----LGACKTHGD 504
GV+ YN +I+ R G++KE +N M F+ + ++ G C+ G+
Sbjct: 522 S-EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA-GE 579
Query: 505 KERAKLAAYKLMK--LEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGN 553
++A+ K+++ P N ++L++ + E V ++M+ G+
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 164/409 (40%), Gaps = 17/409 (4%)
Query: 35 GKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFR 94
K ++ LIRG P +L+N K G +D A LF R+ K +V + +I GF
Sbjct: 307 AKMVNRMLIRGFA-PDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVT 365
Query: 95 SLRFREALDTFCQM-RAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELF 153
R +A M + G +S++ G + ++V + G ++
Sbjct: 366 HGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVY 425
Query: 154 LGSNLTDMYSKCGEVSDACKVFEEMPC----KDEVLWTSMIDGYVKNGNFEKALIAYKKM 209
+ L D + K G++ +A V EM + V + +I + K +A+ +++M
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 210 VTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDM 269
D + S +S + L ++ G T N L + + + G++
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 270 VSASN-----VFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFS 324
A VFQ + +++ +++ G +++KA + F + G P+ + +
Sbjct: 546 KEARKLVNEMVFQGSP--LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 325 SLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE-- 382
LI +E ++V D ++L++ + G + + +F +++
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 383 --NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLK 429
P+ +NTL+ + G +A +E ++ G PN T+ LL+
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 123/324 (37%), Gaps = 43/324 (13%)
Query: 269 MVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIK 328
M+ NV+ + + S+ +++ V + + A N F D+ + I P FTF ++K
Sbjct: 169 MLEMRNVYSCEPTFK---SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 225
Query: 329 ACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE----NP 384
A +++ L + K + + L+ KC + ++QL +E+ P
Sbjct: 226 AFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285
Query: 385 NDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYF 444
+ +N ++ + A + N M+ RG P+ +T+ L+ G G V+ + F
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 445 YSMDKI-------------------------------YGVMPREEHYNCIIDLL---GRA 470
Y + K YG++P YN +I G
Sbjct: 346 YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405
Query: 471 GKLKEVEDFINSMPFEPTAFGWCSFL-GACKTHG-DKERAKLAAYKLMKLEPENSGAHVL 528
G EV + + +P + + + G CK D+ L L+P G + L
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 529 LSNIYAKERQWEDVRCLRKMIRDG 552
+S + R E V R+M R G
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKG 489
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 178/413 (43%), Gaps = 13/413 (3%)
Query: 84 SWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLV 143
S T ++ G R +EA F + EG S ++++ A + + V
Sbjct: 321 SRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKV 380
Query: 144 VKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP---CKDEV-LWTSMIDGYVKNGNF 199
K+G + L + + + S+ G + A K+FE+M CK + ++I GY K G
Sbjct: 381 EKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKL 440
Query: 200 EKALIAYKKMVTDNVFIDQHVLCSTL-SACTALKAFSFGKSLHAIIVKFGFEYETFIGNA 258
E++ M+ D + C+ L A + ++ + +G + + N
Sbjct: 441 EESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNT 500
Query: 259 LTDLYSKSGDMVSASNVFQS----DSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
L Y++ G +A ++ + N+ + IV+GY E ++E+AL F ++
Sbjct: 501 LAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKEL 560
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
G+ PN F F+SLIK N ++ + + +F D S L++ + G
Sbjct: 561 GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRC 620
Query: 375 IQLF-DEIE---NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKG 430
+++ D +E +P+ A++ L +A+ G A + N+M G++PN V + ++ G
Sbjct: 621 EEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISG 680
Query: 431 CSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
AG ++ + + M I G+ P Y +I G A + + E+ + M
Sbjct: 681 WCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDM 733
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/428 (16%), Positives = 160/428 (37%), Gaps = 78/428 (18%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
+I +++ L + ++ ++ GC P N L+ Y K G+L+ + +L D M +
Sbjct: 395 IINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDE 454
Query: 82 MV-----SWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFG 136
M+ + ++ + + EA + +M++ G +++ +A A +GS
Sbjct: 455 MLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGST--- 511
Query: 137 VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVLWTSMIDGYVKN 196
+++ L + + CG ++++GY +
Sbjct: 512 CTAEDMIIPR------MLHNKVKPNVRTCG---------------------TIVNGYCEE 544
Query: 197 GNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIG 256
G E+AL + +M + G F+
Sbjct: 545 GKMEEALRFFYRM-----------------------------------KELGVHPNLFVF 569
Query: 257 NALTDLYSKSGDMVSASNV--FQSDSGCR-NIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
N+L + DM V + G + ++V+F+ +++ + + +++ + D+
Sbjct: 570 NSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE 629
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
GI+P+ FS L K A + E + Q+ KF + + + ++ + G
Sbjct: 630 GGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKK 689
Query: 374 SIQLFDEI-----ENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLL 428
++Q++ ++ +PN T + TL+ F + A E +M + + P T +
Sbjct: 690 AMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIA 749
Query: 429 KGCSHAGM 436
G G+
Sbjct: 750 DGWKSIGV 757
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/525 (22%), Positives = 218/525 (41%), Gaps = 21/525 (4%)
Query: 57 LLNLYSKCGELDYAIKLFDRMSKR----NMVSWTAMITGFFRSLRFREALDTFCQMRAEG 112
L N S ++D A+ LF M K ++V + +++ + +F + QM+ G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 113 ETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDAC 172
+ + S + + + V ++K G+ ++ S+L + Y +SDA
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 173 KVFEEMP----CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSAC 228
+ ++M D +T++I G + +A+ +MV D + ++
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 229 TALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVF--QSDSGCR-NI 285
SL + K E + I N + D K M A N+F + G R ++
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 286 VSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQ 345
++++++ + A D+ I PN TFS+LI A + KL L+ +
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 346 VVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNTLVGVFAQHGL 401
++K + D D F S+L++ + D + +F+ + + PN ++TL+ F +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 402 GRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYN 461
+E F EM RGL N VT+ L+ G A ++ F M + GV P YN
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV-GVHPNILTYN 472
Query: 462 CIIDLLGRAGKLKE---VEDFINSMPFEPTAFGWCSFL-GACKTHGDKERAKL-AAYKLM 516
++D L + GKL + V +++ EP + + + G CK ++ +L L
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532
Query: 517 KLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNMKKLPGYS 561
+ P + ++S K + E L+KM DG + Y+
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYN 577
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/494 (20%), Positives = 207/494 (41%), Gaps = 54/494 (10%)
Query: 31 ELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS----KRNMVSWT 86
+LS + A++++ G P + LLN Y + A+ L D+M K + ++T
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 87 AMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKS 146
+I G F + EA+ QM G +V+ G I + + + K
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 147 GFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGYVKNGNFEKA 202
++ + + + D K + DA +F EM K D ++S+I G + A
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 203 LIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDL 262
++++D + + ++ +V F +AL D
Sbjct: 313 ----SRLLSDMI----------------------ERKINPNVVTF---------SALIDA 337
Query: 263 YSKSGDMVSASNVFQS---DSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPN 319
+ K G +V A ++ S +I +++++++G+ D+L++A + F + + PN
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 320 EFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFD 379
T+S+LIK ++E G L ++ + + + L+ + + D++ +F
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 380 EIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAG 435
++ + PN +N L+ ++G A+ F + ++P+ T+ +++G AG
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Query: 436 MVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFE---PTAFGW 492
VEDG F ++ + GV P YN +I R G +E + + M + P + +
Sbjct: 518 KVEDGWELFCNL-SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Query: 493 CSFLGACKTHGDKE 506
+ + A GD+E
Sbjct: 577 NTLIRARLRDGDRE 590
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 181/428 (42%), Gaps = 44/428 (10%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ LI + S+ L Q+++ GC P ++N K G++D A+ L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 75 DRMSK----RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
+M K ++V + +I G + +AL+ F +M +G F SS++ +
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 131 GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLW 186
G ++ +++ + S L D + K G++ +A K+++EM + D +
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 187 TSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVK 246
+S+I+G+ + ++A ++ M++ + F + ++ T +K F K +
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPN------VVTYSTLIKGFCKAKRVEE---- 416
Query: 247 FGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALN 306
G L S+ G +V N V++T ++ G+ + + A
Sbjct: 417 ---------GMELFREMSQRG-LVG------------NTVTYTTLIHGFFQARDCDNAQM 454
Query: 307 AFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYG 366
F + + G+ PN T++ L+ KL ++ + + + D + + +++
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 367 KCGLFDHSIQLFDEIE----NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAV 422
K G + +LF + +PN A+NT++ F + G A +M + G PN+
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 423 TFVNLLKG 430
T+ L++
Sbjct: 575 TYNTLIRA 582
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 148/334 (44%), Gaps = 11/334 (3%)
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
V++ N E A Y+KM+ + FI+ L L ++ F + A+++K GF +
Sbjct: 83 VRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNV 142
Query: 254 FIGNALTDLYSKS---GDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID 310
+ N L ++ G VS + +S ++ S+ ++ G+ E +LEKAL +
Sbjct: 143 YNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANE 202
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGL 370
++ SG + T+ LI A K++ ++ + D V ++L+ + CG
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262
Query: 371 FDHSIQLFDEI----ENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVN 426
D LFDE+ ++P +NTL+ F + G + A E F M++RG++PN T+
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 427 LLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMP-- 484
L+ G G ++ L M + P YN II+ L + G + + + + M
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIE-KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 485 -FEPTAFGWCSFLGACKTHGDKERAKLAAYKLMK 517
P + LG GD + A Y ++K
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 180/422 (42%), Gaps = 46/422 (10%)
Query: 38 LHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN----MVSWTAMITGFF 93
++ LIRG C CGELD LFD + +R +++ +I GF
Sbjct: 249 VYTSLIRGFC---------------DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293
Query: 94 RSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELF 153
+ + +EA + F M G + + + ++ +G + +Q+ L+++
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV 353
Query: 154 LGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGYVKNGNFEKALIAYKKM 209
+ + + K G V+DA ++ E M + D + + ++ G G+ ++A M
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Query: 210 VTDNVFIDQ---------HVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALT 260
+ D+ + D H LC AL + ++ K G + N L
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL------LVEKLG-AGDRVTTNILL 466
Query: 261 DLYSKSGDMVSASNVFQ--SDSG-CRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIE 317
+ K+GD+ A +++ SDS RN ++TA++DG+ + L A +R S ++
Sbjct: 467 NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ 526
Query: 318 PNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQL 377
P+ F ++ L+ + + L+ L ++ + N D + ++D K G + L
Sbjct: 527 PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586
Query: 378 FDEIE----NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSH 433
+ +P+ ++ L+ F + G AI F++MVD G +P+A ++LK C
Sbjct: 587 LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCIS 646
Query: 434 AG 435
G
Sbjct: 647 QG 648
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 108/524 (20%), Positives = 212/524 (40%), Gaps = 39/524 (7%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKR- 80
L++ + E K L ++ R +P F N ++ + + EL+ A++L + M
Sbjct: 148 LLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG 207
Query: 81 ---NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
++V+W +I F ++ + EA+ +M+ G A +S+++ G + G
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGY 193
+ V++ G + L + K G++ +A ++FE M + + +T +IDG
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Query: 194 VKNGNFEKALIAYKKM---------VTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAII 244
G ++AL M VT N+ I++ LC A++ K
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK--LCKDGLVADAVEIVELMKKRRT-- 383
Query: 245 VKFGFEYETFIGNALTDLYSKSGDMVSASNVF-----QSDSGCRNIVSFTAIVDGYVEMD 299
+ N L GD+ AS + S +++S+ A++ G + +
Sbjct: 384 -----RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 300 QLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS 359
+L +AL+ + L + T + L+ + + L Q+ R+ +
Sbjct: 439 RLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYT 498
Query: 360 ALVDMYGKCGLFDHSIQLFDEIE----NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDR 415
A++D + K G+ + + L ++ P+ +N L+ + G A F EM
Sbjct: 499 AMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRD 558
Query: 416 GLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKE 475
P+ V+F ++ G AG ++ + M + G+ P Y+ +I+ + G L E
Sbjct: 559 NNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA-GLSPDLFTYSKLINRFLKLGYLDE 617
Query: 476 VEDFINSM---PFEPTAFGWCSFLGACKTHGDKERAKLAAYKLM 516
F + M FEP A S L C + G+ ++ KL+
Sbjct: 618 AISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLV 661
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 90/471 (19%), Positives = 178/471 (37%), Gaps = 88/471 (18%)
Query: 57 LLNLYSKCGELDYAIKLFDRMSKR----NMVSWTAMITGFFRSLRFREALDTFCQMRAEG 112
LL Y + + +A + M KR N+ + ++ G R+L +A+ +MR
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 113 ETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDAC 172
F+ ++V++ ++ +++ + SG L L D + K G++ +A
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 173 KVFEEMPC----KDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSAC 228
+EM D V++TS+I G+ G ++
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR--------------------------- 265
Query: 229 TALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQ--SDSGCR-NI 285
GK+L +++ G N L + K G + AS +F+ + G R N+
Sbjct: 266 --------GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNV 317
Query: 286 VSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLI-KACAN------------ 332
++T ++DG + + ++AL + EPN T++ +I K C +
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVEL 377
Query: 333 -------QAKLEHGSLLHGQVVKFNFDR---------------DPFVSSALVDMYGKC-- 368
+ + LL G K + D DP V S ++G C
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKE 437
Query: 369 GLFDHSIQLFD----EIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTF 424
++ ++D ++ + N L+ + G A+E + ++ D + N+ T+
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 425 VNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKE 475
++ G GM+ M ++ + P YNC++ L + G L +
Sbjct: 498 TAMIDGFCKTGMLNVAKGLLCKM-RVSELQPSVFDYNCLLSSLCKEGSLDQ 547
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 171/367 (46%), Gaps = 18/367 (4%)
Query: 81 NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVH 140
N+V++ +I GF + A D F M G A S+++ G + G ++
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 141 CLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGYVKN 196
+ G ++ + S+ D+Y K G+++ A V++ M C+ + V +T +I G ++
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 197 GNFEKALIAYKKMVTDNV---FIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
G +A Y +++ + + L C L++ G +L+ ++K G+ +
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS---GFALYEDMIKMGYPPDV 461
Query: 254 FIGNALTDLYSKSGDMVSA---SNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID 310
I L D SK G M+ A S S N+V F +++DG+ +++ ++AL F
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGL 370
+ GI+P+ TF+++++ + +LE L ++ K + D L+D + K
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 371 FDHSIQLFDEIENPNDTA----WNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVN 426
+QLFD ++ +A N ++ + + +A + FN +++ ++P+ VT+
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 427 LLKG-CS 432
++ G CS
Sbjct: 642 MICGYCS 648
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 181/428 (42%), Gaps = 40/428 (9%)
Query: 65 GELDYAIKLFDRMSKRNMV----SWTAMITGFFRSLRFREALDTFCQM-RAEGETASQFA 119
G +D A+++F ++ +V S M+ S R D F ++ R E + A
Sbjct: 160 GMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSA 219
Query: 120 LSSVLQACASLGSIQFGVQVHCLVVKSGFGC---------------ELFLGSNLTDMYSK 164
VL A G + + H LV++ GF ++ + S L +
Sbjct: 220 HGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLD 279
Query: 165 CGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCST 224
CG P + V + ++I+G+ K G ++A +K M + D +
Sbjct: 280 CG------------PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTL 327
Query: 225 LSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS---DSG 281
+ G L + + G + + + ++ D+Y KSGD+ +AS V++
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387
Query: 282 CRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSL 341
N+V++T ++ G + ++ +A + + G+EP+ T+SSLI L G
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 342 LHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH----SIQLFDEIENPNDTAWNTLVGVFA 397
L+ ++K + D + LVD K GL H S+++ + N +N+L+ +
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 398 QHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPRE 457
+ A++ F M G+KP+ TF +++ G +E+ L F+ M K+ G+ P
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM-GLEPDA 566
Query: 458 EHYNCIID 465
Y +ID
Sbjct: 567 LAYCTLID 574
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 162/399 (40%), Gaps = 68/399 (17%)
Query: 20 AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCG----ELDYAIKLFD 75
+ LI + L G L+ +I+ G P + L++ SK G + +++K+
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 76 RMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQ- 134
+ + N+V + ++I G+ R RF EAL F M G ++V++ G ++
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE 549
Query: 135 ----------------------------------FGVQVHCLVVKSGFGCELFLGSNLTD 160
G+Q+ L+ ++ ++ + + +
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 161 MYSKCGEVSDACKVFEEM------PCKDEVLWTSMIDGYVKNGNFEKALIAYKKM----- 209
+ KC + DA K F + P D V + +MI GY ++A ++ +
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEP--DIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667
Query: 210 ----VTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSK 265
VT + I HVLC A++ FS I+ + G + L D +SK
Sbjct: 668 GPNTVTLTILI--HVLCKNNDMDGAIRMFS-------IMAEKGSKPNAVTYGCLMDWFSK 718
Query: 266 SGDMVSASNVF---QSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFT 322
S D+ + +F Q +IVS++ I+DG + ++++A N F ++ + P+
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 778
Query: 323 FSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSAL 361
++ LI+ +L +LL+ +++ D + AL
Sbjct: 779 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 119/508 (23%), Positives = 205/508 (40%), Gaps = 72/508 (14%)
Query: 84 SWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLV 143
S T ++ ++ +FR ++ F + S+F +QA L + G+++ +
Sbjct: 146 SLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRM 205
Query: 144 VKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGYVKNGNF 199
+F+ + L D K ++DA ++F+EM + + + ++IDGY K GN
Sbjct: 206 KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNP 265
Query: 200 EKALIAYKKMVTDNVFIDQHVLCSTLSACTALKA-FSFGKSLHAIIV-----KFGFEYET 253
EK+ ++M D H+ S ++ T LK F G A V GF +
Sbjct: 266 EKSFKVRERMKAD------HIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDA 319
Query: 254 FIGNALTDLYSKSGDMVSASNVFQS--DSGCR---------------------------- 283
F + L D YS + +A V+++ DSG +
Sbjct: 320 FTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGR 379
Query: 284 --------NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAK 335
N V + ++DGY L A + G++P+ ++ LI+ +
Sbjct: 380 EMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGE 439
Query: 336 LEHGSLLHGQVVKFNFDR-DPFVSS--ALVDMYGKCGLFDHSIQLFDEIEN----PNDTA 388
+E+ +V K P V + L+ YG+ FD + E+E+ PN +
Sbjct: 440 MENA---EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496
Query: 389 WNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMD 448
+ TL+ + A +M DRG+ P + L+ GC G +ED + M
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556
Query: 449 KIYGVMPREEHYNCIIDLLGRAGKLKEVEDF---INSMPFEPTAFGWCSFLGACKTHGDK 505
K G+ YN +ID L GKL E ED I+ +P F + S + G+
Sbjct: 557 K-KGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNV 615
Query: 506 ERAKLAAYKLMK---LEPENSGAHVLLS 530
+R +A Y+ MK ++P H+L+S
Sbjct: 616 QRC-IALYEEMKRSGIKPTLKTYHLLIS 642
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/499 (21%), Positives = 208/499 (41%), Gaps = 46/499 (9%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS--- 78
LI + K ++ +QL +++ LP N L++ Y K G + + K+ +RM
Sbjct: 220 LIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH 279
Query: 79 -KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
+ +++++ ++ G F++ +A + +M+ G F S + +S + +
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVF-EEMP---CKDEVLWTSMIDGY 193
V+ V SG + S L + K G++ A ++ EM +EV++ +MIDGY
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGY 399
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVL-CSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
+ G+ A + + M + D C C + + K ++ + +K G
Sbjct: 400 CRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK-GVSPS 458
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQ--SDSGCR-NIVSFTAIVDGYVEMDQLEKALNAFI 309
N L Y + + ++ + D+G N+VS+ +++ + +L +A
Sbjct: 459 VETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKR 518
Query: 310 DLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCG 369
D+ + G+ P ++ LI C ++ K+E F F ++
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDA---------FRFSKE--------------- 554
Query: 370 LFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLK 429
+ I+L N +NTL+ + G A + E+ +GLKP+ T+ +L+
Sbjct: 555 MLKKGIEL-------NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Query: 430 GCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFEPTA 489
G AG V+ + + M K G+ P + Y+ +I L + G ++ E M +P
Sbjct: 608 GYGFAGNVQRCIALYEEM-KRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDL 665
Query: 490 FGWCSFLGACKTHGDKERA 508
+ L HGD E+A
Sbjct: 666 LVYNGVLHCYAVHGDMEKA 684
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/479 (20%), Positives = 208/479 (43%), Gaps = 17/479 (3%)
Query: 21 QLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIK----LFDR 76
+L++ + ++ + ++L ++I+ G LP F N + + GELD A++ L ++
Sbjct: 221 KLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ 280
Query: 77 MSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFG 136
K +++++ +I G ++ +F+EA +M EG + ++++ G +Q
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 137 VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDG 192
++ V +GF + F +L D GE + A +F E K + +L+ ++I G
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
G +A +M + + ++ + S L +++ G+ +
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQS--DSGC-RNIVSFTAIVDGYVEMDQLEKALNAFI 309
F N L YS M +A + D+G ++ ++ ++++G + + E + +
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 310 DLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCG 369
+ G PN FTF+ L+++ KL+ L ++ + + D L+D + K G
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Query: 370 LFDHSIQLFDEIE-----NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTF 424
D + LF ++E + + +N ++ F + A + F EMVDR L P+ T+
Sbjct: 581 DLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Query: 425 VNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
++ G G V G + M + G +P +I+ L ++ E I+ M
Sbjct: 641 RLMVDGFCKTGNVNLGYKFLLEMME-NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRM 698
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/507 (21%), Positives = 208/507 (41%), Gaps = 69/507 (13%)
Query: 70 AIKLFDRMSKR----NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQ 125
A++L + MS + N+V++ ++ GF+ E + F +M A G + + +L+
Sbjct: 165 ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLR 224
Query: 126 ACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACK----VFEEMPCK 181
G ++ ++ V+K G LF + + GE+ A + + E+ P
Sbjct: 225 VLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKP 284
Query: 182 DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLH 241
D + + ++I G KN F++A + KMV +
Sbjct: 285 DVITYNNLIYGLCKNSKFQEAEVYLGKMVNE----------------------------- 315
Query: 242 AIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIV----SFTAIVDGYVE 297
G E +++ N L Y K G MV + D+ V ++ +++DG
Sbjct: 316 ------GLEPDSYTYNTLIAGYCKGG-MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368
Query: 298 MDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFV 357
+ +AL F + GI+PN +++LIK +NQ + + L ++ + +
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 358 SSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMV 413
+ LV+ K G + L + + P+ +N L+ ++ NA+E + M+
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 414 DRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKL 473
D G+ P+ T+ +LL G ED + + +M + G P +N +++ L R KL
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE-KGCAPNLFTFNILLESLCRYRKL 547
Query: 474 KEVEDFINSM---PFEPTAFGWCSFL-GACKTHGDKE------RAKLAAYKLMKLEPE-N 522
E + M P A + + + G CK +GD + R AYK+ P N
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCK-NGDLDGAYTLFRKMEEAYKVSSSTPTYN 606
Query: 523 SGAHVLLS--NIYAKERQWEDV--RCL 545
H N+ E+ ++++ RCL
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 111/510 (21%), Positives = 210/510 (41%), Gaps = 62/510 (12%)
Query: 100 EALDTFCQMRAEGETASQFALSSVLQACASLGSI-QFGVQVHCLV-VKSGFGCELFLGSN 157
+AL+ F MR E + LS+ LG +F LV ++ G + G
Sbjct: 22 KALEMFNSMRKE--VGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVY 79
Query: 158 LTDM--YSKCGEVSDACKVFEEMP---CKDEVL-WTSMIDGYVKNGNFEKALIAYKKM-- 209
+ M Y + G+V +A VFE M C+ V + +++ V +G F++A Y +M
Sbjct: 80 VGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRD 139
Query: 210 --VTDNVF---IDQHVLCSTLSACTALKAF----SFGKSLHAI---IVKFGFEYETFIG- 256
+T +V+ I C T AL+ S G ++ + V GF E F
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAE 199
Query: 257 --------------------NALTDLYSKSGDMVSASNVFQS---DSGCRNIVSFTAIVD 293
N L + K GD+ + N+ ++ +
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ 259
Query: 294 GYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDR 353
G + +L+ A+ L G +P+ T+++LI +K + + G++V +
Sbjct: 260 GLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319
Query: 354 DPFVSSALVDMYGKCGLFDHSIQLF-DEIEN---PNDTAWNTLVGVFAQHGLGRNAIETF 409
D + + L+ Y K G+ + ++ D + N P+ + +L+ G A+ F
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 410 NEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGR 469
NE + +G+KPN + + L+KG S+ GM+ + M + G++P + +N +++ L +
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE-KGLIPEVQTFNILVNGLCK 438
Query: 470 AGKLKEVEDFINSM---PFEPTAFGWCSFLGACKTHGDKERAKLAAYKLM---KLEPENS 523
G + + + + M + P F + + T E A L +M ++P+
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENA-LEILDVMLDNGVDPDVY 497
Query: 524 GAHVLLSNIYAKERQWEDV-RCLRKMIRDG 552
+ LL+ + K ++EDV + M+ G
Sbjct: 498 TYNSLLNGL-CKTSKFEDVMETYKTMVEKG 526
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 195/462 (42%), Gaps = 54/462 (11%)
Query: 61 YSKCGELDYAIKLFDRMSKRNMVSWTAMITGFF-----RSLRFREALDTFCQMRAEGETA 115
+SK G + A FD +KR + A I G ++ A +M EG A
Sbjct: 389 FSKAGHAEAADYWFDE-AKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDA 447
Query: 116 SQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDA---C 172
+++ + + G+ V + + GF + L ++Y+K G++S A
Sbjct: 448 PIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVS 507
Query: 173 KVFEEMPCKDEV-LWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTAL 231
+V +E K + ++ MI+G+VK ++ A ++ MV + + D + + +SA +
Sbjct: 508 RVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGM 567
Query: 232 KAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQ--SDSGCRNIV-SF 288
+ K T + Y+KSGDM + VF GC V +F
Sbjct: 568 GNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTF 627
Query: 289 TAIVDGYVEMDQLEKALNA-----------------------------------FIDLRN 313
+++G VE Q+EKA+ F L+N
Sbjct: 628 NGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQN 687
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
G++ + FT+ +L+KAC +++ + ++ N R+ FV + L+D + + G
Sbjct: 688 EGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWE 747
Query: 374 SIQLFDEIE----NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLK 429
+ L +++ P+ + + + ++ G A +T EM G+KPN T+ L+K
Sbjct: 748 AADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIK 807
Query: 430 GCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCII-DLLGRA 470
G + A + E L+ + M K G+ P + Y+C++ LL RA
Sbjct: 808 GWARASLPEKALSCYEEM-KAMGIKPDKAVYHCLLTSLLSRA 848
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 194/492 (39%), Gaps = 60/492 (12%)
Query: 71 IKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
I F+++SK + + M+ + R A +TF +MRA G T + +S++ A A
Sbjct: 298 ISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVG 357
Query: 131 GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDEVL----W 186
+ + + + G L S + +SK G A F+E + L +
Sbjct: 358 RDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIY 417
Query: 187 TSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVK 246
+I + + N E+A ++M + + + + + T + G + + +
Sbjct: 418 GKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE 477
Query: 247 FGFEYETFIGNALTDLYSKSGDMVSA---SNVFQSDSGCRNIVSFTAIVDGYVEMDQLEK 303
GF L +LY+K G + A S V + + N+ +++ +++G+V++
Sbjct: 478 CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN 537
Query: 304 ALNAFIDLRNSGIEPNEFTFSSLIKA-------------CANQAKLEHG-------SLLH 343
A F D+ G++P+ ++++I A KL H ++H
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 597
Query: 344 GQVVKFNFDRDPFVSSALVDMYGKCG-------------------LFDHSIQLFDEIE-- 382
G + R S + DM +CG + ++++ DE+
Sbjct: 598 GYAKSGDMRR----SLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 653
Query: 383 --NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG 440
+ N+ + ++ +A G A E F + + GL + T+ LLK C +G ++
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Query: 441 LNYFYSMDKIYGVMPREEH-YNCIIDLLGRAGKLKEVEDFINSMPFE---PTAFGWCSFL 496
L M +PR YN +ID R G + E D I M E P + SF+
Sbjct: 714 LAVTKEMSARN--IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI 771
Query: 497 GACKTHGDKERA 508
AC GD RA
Sbjct: 772 SACSKAGDMNRA 783
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 129/307 (42%), Gaps = 46/307 (14%)
Query: 49 PCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMV----SWTAMITGFFRSLRFREALDT 104
P T +++ Y+K G++ ++++FD M + V ++ +I G + +A++
Sbjct: 587 PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEI 646
Query: 105 FCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSK 164
+M G +A++ + ++Q AS+G + + G ++F L K
Sbjct: 647 LDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCK 706
Query: 165 CGEVSDACKVFEEMPCKD----EVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHV 220
G + A V +EM ++ ++ +IDG+ + G+ +A ++M + V D H
Sbjct: 707 SGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHT 766
Query: 221 LCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDS 280
S +SAC SK+GDM A+ +
Sbjct: 767 YTSFISAC-----------------------------------SKAGDMNRATQTIEEME 791
Query: 281 GC---RNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLE 337
NI ++T ++ G+ EKAL+ + +++ GI+P++ + L+ + ++A +
Sbjct: 792 ALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIA 851
Query: 338 HGSLLHG 344
+ G
Sbjct: 852 EAYIYSG 858
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 59/453 (13%)
Query: 81 NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVH 140
N+V++ +I GF + A D F M G A S+++ G + G ++
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 141 CLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGYVKN 196
+ G ++ + S+ D+Y K G+++ A V++ M C+ + V +T +I G ++
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 197 GNFEKALIAYKKMVTDNV---FIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
G +A Y +++ + + L C L++ G +L+ ++K G+ +
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS---GFALYEDMIKMGYPPDV 461
Query: 254 FIGNALTDLYSKSGDMVSA---SNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID 310
I L D SK G M+ A S S N+V F +++DG+ +++ ++AL F
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 311 LRNSGIEPNEFTFSSLIK------ACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDM 364
+ GI+P+ TF+++++ A K G L + + D V + ++ +
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 581
Query: 365 YGKCGLFDHSIQLF----------------------------DEIE-----------NPN 385
KC + + + F DE E PN
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641
Query: 386 DTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFY 445
L+ V ++ AI F+ M ++G KPNAVT+ L+ S + +E F
Sbjct: 642 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 701
Query: 446 SMDKIYGVMPREEHYNCIIDLLGRAGKLKEVED 478
M + G+ P Y+ IID L + G++ E +
Sbjct: 702 EMQE-KGISPSIVSYSIIIDGLCKRGRVDEATN 733
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/497 (21%), Positives = 205/497 (41%), Gaps = 60/497 (12%)
Query: 65 GELDYAIKLFDRMSKRNMV----SWTAMITGFFRSLRFREALDTFCQM-RAEGETASQFA 119
G +D A+++F ++ +V S M+ S R D F ++ R E + A
Sbjct: 160 GMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSA 219
Query: 120 LSSVLQACASLGSIQFGVQVHCLVVKSGFGC---------------ELFLGSNLTDMYSK 164
VL A G + + H LV++ GF ++ + S L +
Sbjct: 220 HGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLD 279
Query: 165 CGEVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCST 224
CG P + V + ++I+G+ K G ++A +K M + D +
Sbjct: 280 CG------------PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTL 327
Query: 225 LSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS---DSG 281
+ G L + + G + + + ++ D+Y KSGD+ +AS V++
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387
Query: 282 CRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSL 341
N+V++T ++ G + ++ +A + + G+EP+ T+SSLI L G
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 342 LHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH----SIQLFDEIENPNDTAWNTLVGVFA 397
L+ ++K + D + LVD K GL H S+++ + N +N+L+ +
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 398 QHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVED----------GLNYFYSM 447
+ A++ F M G+KP+ TF +++ ++ED GL F M
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMR----VSIMEDAFCKHMKPTIGLQLFDLM 563
Query: 448 DKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM---PFEPTAFGWCSFL-GACKTHG 503
+ + N +I LL + ++++ F N++ EP + + + G C
Sbjct: 564 QR-NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622
Query: 504 DKERAKLAAYKLMKLEP 520
E ++ ++L+K+ P
Sbjct: 623 LDEAERI--FELLKVTP 637
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 161/371 (43%), Gaps = 41/371 (11%)
Query: 20 AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCG----ELDYAIKLFD 75
+ LI + L G L+ +I+ G P + L++ SK G + +++K+
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 76 RMSKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQA-------CA 128
+ + N+V + ++I G+ R RF EAL F M G ++V++ C
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCK 549
Query: 129 SLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEM------PCKD 182
+ G+Q+ L+ ++ ++ + + + + KC + DA K F + P D
Sbjct: 550 HMKP-TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP--D 606
Query: 183 EVLWTSMIDGYVKNGNFEKALIAYKKM---------VTDNVFIDQHVLCSTLSACTALKA 233
V + +MI GY ++A ++ + VT + I HVLC A++
Sbjct: 607 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI--HVLCKNNDMDGAIRM 664
Query: 234 FSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVF---QSDSGCRNIVSFTA 290
FS I+ + G + L D +SKS D+ + +F Q +IVS++
Sbjct: 665 FS-------IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 717
Query: 291 IVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFN 350
I+DG + ++++A N F ++ + P+ ++ LI+ +L +LL+ +++
Sbjct: 718 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 777
Query: 351 FDRDPFVSSAL 361
D + AL
Sbjct: 778 VKPDDLLQRAL 788
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/521 (20%), Positives = 223/521 (42%), Gaps = 62/521 (11%)
Query: 19 VAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS 78
V ++ + ++ + + K+++ +++ G T L+ + + + A+K+F R+
Sbjct: 207 VNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVM 266
Query: 79 KRNM----VSWTAMITGFFRSLRFREALDTFCQMRAE-GETASQFALSSVLQACASLGSI 133
R + ++ + ++ ALD +MR + G ASQ +SV+ A G++
Sbjct: 267 SRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNM 326
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVF----EEMPCKDEVLWTSM 189
+ V+V +V G + ++L + Y K E+ A +F EE D+V+++ M
Sbjct: 327 EEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVM 386
Query: 190 IDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF 249
++ + KN EKA+ Y +M + + ++ + + C LKA +S A + F
Sbjct: 387 VEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGC--LKA----ESPEAALEIFND 440
Query: 250 EYETFIG-----NALTDLYSKSGDMVSASNVFQ--SDSGCR-NIVSFTAIVDGYVEMDQL 301
+E++I N + L+ K G + +A++ + G N+V + ++ + M +
Sbjct: 441 SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNM 500
Query: 302 EKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSAL 361
+ A + F ++ G+EPN FT+S LI ++ + Q+ NF+ + + + +
Sbjct: 501 DLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTI 560
Query: 362 VDMYGKCGLFDHSIQLFDEIENPND-----TAWNTLVGVFAQHGLGRNAIETFNEMVDRG 416
++ K G + ++ + T++N+++ F + G +A+ET+ EM + G
Sbjct: 561 INGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENG 620
Query: 417 LKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKI-------------------------- 450
PN VTF +L+ G + ++ L + M +
Sbjct: 621 KSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAY 680
Query: 451 --------YGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
G+MP YN +I GK+ D M
Sbjct: 681 TLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/464 (19%), Positives = 188/464 (40%), Gaps = 85/464 (18%)
Query: 57 LLNLYSKCGELDYAIKLFDRMSKRNM----VSWTAMITGFFRSLRFREALDTFCQMRAEG 112
L+N Y K EL A+ LF+RM + + V ++ M+ F +++ +A++ + +M++
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVR 410
Query: 113 ETASQFALSSVLQACASLGSIQFGVQVHCLVVKS----GFGC-ELFL------------- 154
S + +++Q C S + +++ +S GF C ++FL
Sbjct: 411 IAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATS 470
Query: 155 ----------------GSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGYV 194
+N+ + + + A +F EM K + ++ +IDG+
Sbjct: 471 FLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFF 530
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKS-LHAIIVKFGFEYET 253
KN + + A +M N ++ + + ++ + S K L +I + +
Sbjct: 531 KNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSC 590
Query: 254 FIGNALTDLYSKSGDMVSASNVFQ--SDSG-CRNIVSFT--------------------- 289
N++ D + K GD SA ++ S++G N+V+FT
Sbjct: 591 TSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHE 650
Query: 290 --------------AIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAK 335
A++DG+ + + ++ A F +L G+ PN ++SLI N K
Sbjct: 651 MKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGK 710
Query: 336 LEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNT 391
++ L+ ++V D F + ++D K G + + L+ E+ + P++
Sbjct: 711 MDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMV 770
Query: 392 LVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAG 435
LV ++ G A + EM + + PN + + ++ G G
Sbjct: 771 LVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREG 814
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/456 (19%), Positives = 179/456 (39%), Gaps = 75/456 (16%)
Query: 55 NHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTA----MITGFFRSLRFREALDTFCQMRA 110
N+LLN Y + +DYA+ F M R +V + +++ RS EA + + +M
Sbjct: 173 NYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVL 232
Query: 111 EGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSD 170
G +++A + V++ V+ G + L S K ++
Sbjct: 233 IGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVM 292
Query: 171 ACKVFEEM------PCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCST 224
A + EM P E +TS+I +VK GN E+A+ +M
Sbjct: 293 ALDLLREMRGKLGVPASQET-YTSVIVAFVKEGNMEEAVRVMDEM--------------- 336
Query: 225 LSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVF---QSDSG 281
V FG +L + Y K ++ A ++F + +
Sbjct: 337 --------------------VGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGL 376
Query: 282 CRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKAC----ANQAKLE 337
+ V F+ +V+ + + ++EKA+ ++ +++ I P+ ++I+ C + +A LE
Sbjct: 377 APDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALE 436
Query: 338 ------HGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PNDT 387
+ HG F+ + + ++ K G D + +E PN
Sbjct: 437 IFNDSFESWIAHG-----------FMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVV 485
Query: 388 AWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSM 447
+N ++ + A F+EM+++GL+PN T+ L+ G ++ + M
Sbjct: 486 FYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQM 545
Query: 448 DKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
+ E YN II+ L + G+ + ++ + ++
Sbjct: 546 NA-SNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 174/403 (43%), Gaps = 50/403 (12%)
Query: 46 GCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKR----NMVSWTAMITGFFRSLRFREA 101
GCLP N L++ Y K ++D KL M+ + N++S+ +I G R R +E
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEV 294
Query: 102 LDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDM 161
+M G + + +++++ G+ + +H +++ G + ++L
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Query: 162 YSKCGEVSDACKVFEEMP----CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFID 217
K G ++ A + ++M C +E +T+++DG+ + G +A ++M DN
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM-NDN---- 409
Query: 218 QHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQ 277
GF NAL + + +G M A V +
Sbjct: 410 ------------------------------GFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 278 --SDSGCR-NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQA 334
+ G ++VS++ ++ G+ +++AL ++ GI+P+ T+SSLI+ Q
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 335 KLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWN 390
+ + L+ ++++ D F +AL++ Y G + ++QL +E+ P+ ++
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 391 TLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSH 433
L+ + R A ++ P+ VT+ L++ CS+
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 118/287 (41%), Gaps = 10/287 (3%)
Query: 284 NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLH 343
N++S+ +++G ++++ ++ G +E T+++LIK + ++H
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 344 GQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNTLVGVFAQH 399
++++ ++L+ K G + +++ D++ PN+ + TLV F+Q
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393
Query: 400 GLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEH 459
G A EM D G P+ VT+ L+ G G +ED + M K G+ P
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVS 452
Query: 460 YNCIIDLLGRAGKLKEVEDFINSMP---FEPTAFGWCSFL-GACKTHGDKERAKLAAYKL 515
Y+ ++ R+ + E M +P + S + G C+ KE L L
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 516 MKLEPENSGAHVLLSNIYAKERQWEDVRCLR-KMIRDGNMKKLPGYS 561
P + + L N Y E E L +M+ G + + YS
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ + LIQ + + + L+ +++R G P F L+N Y G+L+ A++L
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLH 543
Query: 75 DRMSKR----NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
+ M ++ ++V+++ +I G + R REA ++ E S ++++ C+
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS-- 601
Query: 131 GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLW 186
+I+F V + GF + G +++A +VFE M K D +
Sbjct: 602 -NIEFKSVVSLI---KGFCMK--------------GMMTEADQVFESMLGKNHKPDGTAY 643
Query: 187 TSMIDGYVKNGNFEKALIAYKKMV 210
MI G+ + G+ KA YK+MV
Sbjct: 644 NIMIHGHCRAGDIRKAYTLYKEMV 667
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 160/415 (38%), Gaps = 74/415 (17%)
Query: 285 IVSFTAIVDGYVEMDQ-LEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLH 343
++S+ A++D + + + A N F ++ S + PN FT++ LI+ ++ L
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
Query: 344 GQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE----NPNDTAWNTLVGVFAQH 399
++ + + L+D Y K D +L + PN ++N ++ +
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 400 GLGRNAIETFNEMVDRGLKPNAVTFVNLLKG-----------CSHAGMVEDGLN------ 442
G + EM RG + VT+ L+KG HA M+ GL
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 443 -----------------YFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMP- 484
F ++ G+ P E Y ++D + G + E + M
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 485 --FEPTAFGWCSFL-GACKTHGDKERAKLAAYKLMK---LEPENSGAHVLLSNIYAKERQ 538
F P+ + + + G C T G E A +A + MK L P+ +LS
Sbjct: 409 NGFSPSVVTYNALINGHCVT-GKMEDA-IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 539 WEDVRCLRKMIRDGNMKKLPGYSWVDIGNETHVFGVEDWSHPRKKEIYEKLDSLLDQIKI 598
E +R R+M+ G YS + ++ + R+ + E D L +++
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSL----------IQGFCEQRRTK--EACD-LYEEMLR 513
Query: 599 VGYVPQ--TESVLIE---MDDTLKEKLLHNHSERI-------AVAYSLLVSPIGK 641
VG P T + LI M+ L EK L H+E + V YS+L++ + K
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDL-EKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 155/341 (45%), Gaps = 19/341 (5%)
Query: 181 KDEVLWT---SMIDGYVKNGNFEKALIAYKKMVTDN----VFIDQHVLCSTLSACTALKA 233
K E+L T S++ G +G++E+A+ ++ +V + + +D V+ +
Sbjct: 131 KSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQ 190
Query: 234 FSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQ---SDSGCRNIVSFTA 290
+S L I + + + YS++G A ++F+ +V++
Sbjct: 191 YSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNV 250
Query: 291 IVDGYVEMDQ-LEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF 349
I+D + +M + K L ++R+ G++ +EFT S+++ ACA + L ++
Sbjct: 251 ILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSC 310
Query: 350 NFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN---PNDT-AWNTLVGVFAQHGLGRNA 405
++ +AL+ ++GK G++ ++ + E+E P D+ +N LV + + G + A
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 406 IETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIID 465
M +G+ PNA+T+ ++ AG ++ L FYSM K G +P YN ++
Sbjct: 371 AGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPNTCTYNAVLS 429
Query: 466 LLGRAGKLKEVEDFINSMPF---EPTAFGWCSFLGACKTHG 503
LLG+ + E+ + M P W + L C G
Sbjct: 430 LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKG 470
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 175/397 (44%), Gaps = 55/397 (13%)
Query: 57 LLNLYSKCGELDYAIKLFDRMSK----RNMVSWTAMITGFFRSLR-FREALDTFCQMRAE 111
+L+ YS+ G+ + AI LF+RM + +V++ ++ F + R +R+ L +MR++
Sbjct: 216 ILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSK 275
Query: 112 GETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDA 171
G +F S+VL ACA G ++ + + G+ + L ++ K G ++A
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEA 335
Query: 172 CKVFEEM---PCK-DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSA 227
V +EM C D V + ++ YV+ G F K +M+T
Sbjct: 336 LSVLKEMEENSCPADSVTYNELVAAYVRAG-FSKEAAGVIEMMTKK-------------- 380
Query: 228 CTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS--DSGC-RN 284
G +AI Y T I D Y K+G A +F S ++GC N
Sbjct: 381 ---------GVMPNAIT------YTTVI-----DAYGKAGKEDEALKLFYSMKEAGCVPN 420
Query: 285 IVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQA--KLEHGSLL 342
++ A++ + + + + D++++G PN T+++++ C N+ K +
Sbjct: 421 TCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFR 480
Query: 343 HGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE----NPNDTAWNTLVGVFAQ 398
+ F DRD F + L+ YG+CG + +++ E+ N T +N L+ A+
Sbjct: 481 EMKSCGFEPDRDTF--NTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 399 HGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAG 435
G R+ ++M +G KP ++ +L+ + G
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 575
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/493 (19%), Positives = 203/493 (41%), Gaps = 60/493 (12%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS +L+ +A + + + + G +P +++ Y K G+ D A+KLF
Sbjct: 350 DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF 409
Query: 75 DRMSK----RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
M + N ++ A+++ + R E + C M++ G + ++ +++L C +
Sbjct: 410 YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNK 469
Query: 131 GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKD----EVLW 186
G +F +V + GF + + L Y +CG DA K++ EM +
Sbjct: 470 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTY 529
Query: 187 TSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVK 246
++++ + G++ +NV D K F ++ ++++++
Sbjct: 530 NALLNALARKGDWRSG---------ENVISDMKS-----------KGFKPTETSYSLMLQ 569
Query: 247 FGFEYETFIGNALTDLYSKSGDMVSA----SNVFQSDSGCRNIVSFTAIVDGYVEMDQLE 302
+ ++G + K G + + + ++ CR L
Sbjct: 570 CYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR----------------ALA 613
Query: 303 KALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALV 362
+ AF + G +P+ F+S++ + + + + D ++L+
Sbjct: 614 GSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLM 673
Query: 363 DMY---GKCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLK 418
DMY G+C + ++ ++ + P+ ++NT++ F + GL + A+ +EM +RG++
Sbjct: 674 DMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIR 733
Query: 419 PNAVTFVNLLKGCSHAGM---VEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKE 475
P T+ + G + GM +ED + D P E + ++D RAGK E
Sbjct: 734 PCIFTYNTFVSGYTAMGMFAEIEDVIECMAKND----CRPNELTFKMVVDGYCRAGKYSE 789
Query: 476 VEDFINSM-PFEP 487
DF++ + F+P
Sbjct: 790 AMDFVSKIKTFDP 802
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 215/533 (40%), Gaps = 56/533 (10%)
Query: 42 LIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK----RNMVSWTAMITGFFRSLR 97
+++ LP F N LL+ +K + D I L ++M + N+ ++ +I F R +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 98 FREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSN 157
AL +M G S LSS+L I V + +V+ G+ + +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 158 LTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDN 213
L + S+A + + M + + V + +++G K G+ + A KM
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 214 VFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSAS 273
+ E + I N + D K + A
Sbjct: 181 I-----------------------------------EADVVIFNTIIDSLCKYRHVDDAL 205
Query: 274 NVFQS--DSGCR-NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKAC 330
N+F+ G R N+V++++++ + A D+ I PN TF++LI A
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 331 ANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PND 386
+ K LH ++K + D D F ++L++ + D + Q+F+ + + P+
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 325
Query: 387 TAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYS 446
+NTL+ F + + E F EM RGL + VT+ L++G H G ++ F
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 447 MDKIYGVMPREEHYNCIIDLLGRAGKLK---EVEDFINSMPFEPTAFGWCSFL-GACKTH 502
M GV P Y+ ++D L GKL+ EV D++ + + + + + G CK
Sbjct: 386 MVS-DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 503 G-DKERAKLAAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNM 554
D + L ++P + ++S + +K E L+KM DG +
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/497 (18%), Positives = 199/497 (40%), Gaps = 23/497 (4%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS--- 78
LI + ++S L ++++ G P + LLN Y + A+ L D+M
Sbjct: 51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 110
Query: 79 -KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
+ + +++T +I G F + EA+ +M G + V+ G I
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 170
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGY 193
+ + + ++ + + + D K V DA +F+EM K + V ++S+I
Sbjct: 171 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 230
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
G + A M+ + + + + A F + LH ++K + +
Sbjct: 231 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDI 290
Query: 254 FIGNALTDLYSKSGDMVSASNVFQ---SDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID 310
F N+L + + + A +F+ S ++ ++ ++ G+ + ++E F +
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 350
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGL 370
+ + G+ + T+++LI+ + ++ + Q+V D S L+D G
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 371 FDHSIQLFDEIENP----NDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVN 426
+ ++++FD ++ + + T++ + G + + F + +G+KPN VT+
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 427 LLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFE 486
++ G ++++ M K G +P YN +I R G + I M
Sbjct: 471 MISGLCSKRLLQEAYALLKKM-KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR-- 527
Query: 487 PTAFGWCSFLGACKTHG 503
C F+G T G
Sbjct: 528 -----SCRFVGDASTIG 539
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/431 (20%), Positives = 172/431 (39%), Gaps = 21/431 (4%)
Query: 18 AVAQLIQTCAQAKELSKGKQLHAQLIRGGCLP--CTFLT-NHLLNLYSKCGELDYAIKLF 74
++ L+ K +S L Q++ G P TF T H L L++K E A+ L
Sbjct: 82 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE---AVALV 138
Query: 75 DRMSKR----NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
DRM +R N+V++ ++ G + A + +M A A ++++ +
Sbjct: 139 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 198
Query: 131 GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLW 186
+ + + + G + S+L G SDA ++ +M K + V +
Sbjct: 199 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 258
Query: 187 TSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVK 246
++ID +VK G F +A + M+ ++ D S ++ K + +V
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
Query: 247 FGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSG---CRNIVSFTAIVDGYVEMDQLEK 303
+ N L + KS + + +F+ S + V++T ++ G +
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 378
Query: 304 ALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVD 363
A F + + G+ P+ T+S L+ N KLE + + K D ++ + +++
Sbjct: 379 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Query: 364 MYGKCGLFDHSIQLFDEIE----NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKP 419
K G D LF + PN +NT++ L + A +M + G P
Sbjct: 439 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 498
Query: 420 NAVTFVNLLKG 430
++ T+ L++
Sbjct: 499 DSGTYNTLIRA 509
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 196/472 (41%), Gaps = 50/472 (10%)
Query: 66 ELDYAIKLFDRMSKR----NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALS 121
+LD A+ LF M K +++ ++ +++ + +F + QM+ G + + S
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 122 SVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK 181
++ + + V ++K G+ + S+L + Y +S+A + ++M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM--- 177
Query: 182 DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLH 241
+ GY N VT N I L + S AL K
Sbjct: 178 -------FVTGYQPN------------TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ 218
Query: 242 AIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCR---NIVSFTAIVDGYVEM 298
+V +G + N L K GD A N+ + ++ + I+DG +
Sbjct: 219 PDLVTYGV-----VVNGLC----KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 269
Query: 299 DQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVS 358
++ ALN F ++ GI PN T+SSLI N + S L +++ + D F
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Query: 359 SALVDMYGKCGLFDHSIQLFDEIE----NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVD 414
SAL+D + K G + +L+DE+ +P+ +++L+ F H A + F MV
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 415 RGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLK 474
+ P+ VT+ L+KG VE+G+ F M + G++ YN +I L +AG
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ-RGLVGNTVTYNILIQGLFQAGDCD 448
Query: 475 EVEDFINSM---PFEPTAFGWCSFL-GACKTHGDKERAKLAAYKLM--KLEP 520
++ M P + + L G CK +G E+A + L K+EP
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCK-NGKLEKAMVVFEYLQRSKMEP 499
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/468 (20%), Positives = 207/468 (44%), Gaps = 19/468 (4%)
Query: 57 LLNLYSKCGELDYAIKLFDRMSK----RNMVSWTAMITGFFRSLRFREALDTFCQMRAEG 112
L+N + + +L A+ + +M K N+V+ ++++ G+ S R EA+ QM G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 113 ETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDAC 172
+ ++++ + + +V G +L + + K G+ A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 173 KVFEEMPC----KDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSAC 228
+ +M +++ ++IDG K + + AL +K+M T + + S +S
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 229 TALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS---DSGCRNI 285
+S L + +++ + F +AL D + K G +V A ++ S +I
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 286 VSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQ 345
V+++++++G+ D+L++A F + + P+ T+++LIK ++E G + +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 346 VVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNTLVGVFAQHGL 401
+ + + + L+ + G D + ++F E+ + PN +NTL+ ++G
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 402 GRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYN 461
A+ F + ++P T+ +++G AG VEDG + F ++ + GV P YN
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYN 540
Query: 462 CIIDLLGRAGKLKEVEDFINSMPFE---PTAFGWCSFLGACKTHGDKE 506
+I R G +E + M + P + + + + A GD+E
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 186/421 (44%), Gaps = 16/421 (3%)
Query: 33 SKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNM----VSWTAM 88
S+ L +++ GC P ++N K G+ D A L ++M + + + + +
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 89 ITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGF 148
I G + +AL+ F +M +G + SS++ + G ++ +++
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 149 GCELFLGSNLTDMYSKCGEVSDACKVFEEMPCKDE----VLWTSMIDGYVKNGNFEKALI 204
++F S L D + K G++ +A K+++EM + V ++S+I+G+ + ++A
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 205 AYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYS 264
++ MV+ + F D + + K G + + + G T N L
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 265 KSGDMVSASNVFQ---SDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEF 321
++GD A +F+ SD NI+++ ++DG + +LEKA+ F L+ S +EP +
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 322 TFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEI 381
T++ +I+ K+E G L + D + ++ + + G + + LF E+
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 382 EN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMV 437
+ PN +NTL+ + G + E EM G +A T + L+ H G +
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST-IGLVTNMLHDGRL 621
Query: 438 E 438
+
Sbjct: 622 D 622
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 132/327 (40%), Gaps = 58/327 (17%)
Query: 20 AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK 79
+ LI S +L + +I P F + L++ + K G+L A KL+D M K
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 80 R----NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQF 135
R ++V+++++I GF R EA F +F
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMF----------------------------EF 386
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMID 191
V HC ++ + L + K V + +VF EM + + V + +I
Sbjct: 387 MVSKHCFP-------DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 192 GYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF-- 249
G + G+ + A +K+MV+D V + ++ T L L +V F +
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDG------VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 250 ----EYETFIGNALTDLYSKSGDMVSASNVF--QSDSGCR-NIVSFTAIVDGYVEMDQLE 302
E + N + + K+G + ++F S G + ++V++ ++ G+ E
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 303 KALNAFIDLRNSGIEPNEFTFSSLIKA 329
+A F +++ G PN +++LI+A
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRA 580
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/523 (20%), Positives = 205/523 (39%), Gaps = 58/523 (11%)
Query: 16 SKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFD 75
++A A LI+ + K + +G +L ++ + + + ++ G+LD A +
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 76 RM----SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLG 131
M + N+V +T +I F ++ RF +A+ +M+ +G F +S++ +
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501
Query: 132 SIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP----CKDEVLWT 187
+ +V++G F Y + E + A K +EM ++VL T
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561
Query: 188 SMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKF 247
+I+ Y K G +A AY+ MV + D ++ + + +
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 248 GFEYETFIGNALTDLYSKSGDMVSASNVFQS--DSG---------------CR------- 283
G + F L + +SK G+M AS++F + G CR
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 284 --------------NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKA 329
N V++ I+DGY + L +A F +++ G+ P+ F +++L+
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Query: 330 CANQAKLEHGSLLHGQVVK-FNFDRDPFVSSALVDMYGKCGLFDHSIQL--------FDE 380
C +E + G K PF +AL++ K G + ++ FD
Sbjct: 742 CCRLNDVERAITIFGTNKKGCASSTAPF--NALINWVFKFGKTELKTEVLNRLMDGSFDR 799
Query: 381 IENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDG 440
PND +N ++ + G A E F++M + L P +T+ +LL G G +
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Query: 441 LNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
F G+ P Y+ II+ + G + ++ M
Sbjct: 860 FPVFDEAIAA-GIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/462 (20%), Positives = 191/462 (41%), Gaps = 43/462 (9%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ + LI + + K L +++ G ++ + + + SK G ++ A LF
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370
Query: 75 DRMSKRNMV----SWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
D M ++ ++ ++I G+ R R+ + +M+ S + +V++ S
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Query: 131 GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP----CKDEVLW 186
G + + ++ SG + + + L + + DA +V +EM D +
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490
Query: 187 TSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVK 246
S+I G K ++A +MV + + + + +S F+ + +
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 247 FGFEYETFIGNALTDLYSKSGDMVSASNVFQS--DSGCR-NIVSFTAIVDGYVEMDQLEK 303
G + L + Y K G ++ A + ++S D G + ++T +++G + D+++
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 304 ALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVD 363
A F ++R GI P+ F++ LI + ++ S
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS----------------------- 647
Query: 364 MYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVT 423
+FD ++ +E PN +N L+G F + G A E +EM +GL PNAVT
Sbjct: 648 -----SIFD---EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 424 FVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIID 465
+ ++ G +G + + F M K+ G++P Y ++D
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEM-KLKGLVPDSFVYTTLVD 740
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 180/425 (42%), Gaps = 25/425 (5%)
Query: 28 QAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMV---- 83
+A E + + ++ G LP L L+N Y K G++ A + M + ++
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593
Query: 84 SWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLV 143
++T ++ G F++ + +A + F +MR +G F+ ++ + LG++Q + +
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 144 VKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGYVKNGNF 199
V+ G + + + L + + GE+ A ++ +EM K + V + ++IDGY K+G+
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 200 EKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNAL 259
+A + +M + D V + + C L ++ K G T NAL
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNAL 772
Query: 260 TDLYSKSGDMVSASNVFQ-------SDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR 312
+ K G + V G N V++ ++D + LE A F ++
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Query: 313 NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
N+ + P T++SL+ + + + + + D + S +++ + K G+
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892
Query: 373 HSIQLFDEI--ENPND-------TAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVT 423
++ L D++ +N D + L+ FA+ G A + MV P++ T
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Query: 424 FVNLL 428
+ L+
Sbjct: 953 VIELI 957
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 143/374 (38%), Gaps = 46/374 (12%)
Query: 195 KNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETF 254
K G EKA + M+ + S + K G L + K +
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418
Query: 255 IGNALTDLYSKSGDMVSASNVFQS--DSGCR-NIVSFTAIVDGYVEMDQLEKALNAFIDL 311
+ SGD+ A N+ + SGCR N+V +T ++ +++ + A+ ++
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 312 RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLF 371
+ GI P+ F ++SLI + +++ ++V+ + F A + Y + F
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 372 DHSIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNL 427
+ + E+ PN L+ + + G A + MVD+G+ +A T+ L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 428 LKGCSHAGMVEDGLNYFYSMDK--------IYGVM------------------------- 454
+ G V+D F M YGV+
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 455 -PREEHYNCIIDLLGRAGKLKEVEDFINSMPFE---PTAFGWCSFL-GACKTHGDKERAK 509
P YN ++ R+G++++ ++ ++ M + P A +C+ + G CK+ E +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 510 L-AAYKLMKLEPEN 522
L KL L P++
Sbjct: 719 LFDEMKLKGLVPDS 732
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 131/319 (41%), Gaps = 12/319 (3%)
Query: 168 VSDACKVFEEMPCKDEV----LWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCS 223
V A K+ E M CK V + +IDG K E A +M + V +D H
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 224 TLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS--DSG 281
+ + K L +V G + ++ + + SK G M A +F SG
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 282 -CRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGS 340
++ ++++GY + + ++++ I + +T+ +++K + L+
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 341 LLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNTLVGVF 396
+ +++ + + + L+ + + F ++++ E++ P+ +N+L+
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Query: 397 AQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPR 456
++ A EMV+ GLKPNA T+ + G A Y M + GV+P
Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC-GVLPN 556
Query: 457 EEHYNCIIDLLGRAGKLKE 475
+ +I+ + GK+ E
Sbjct: 557 KVLCTGLINEYCKKGKVIE 575
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 199/483 (41%), Gaps = 55/483 (11%)
Query: 21 QLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK- 79
+L A+ K+ L Q+ G + + ++N + +C +L YA ++ K
Sbjct: 93 RLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKL 152
Query: 80 ---RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFG 136
+ V + ++ G R EAL+ +M G + L++++ G +
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 137 VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDG 192
V + +V++GF + ++ K G+ + A ++ +M + D V ++ +IDG
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
K+G+ + A N+F + + K A I+ Y
Sbjct: 273 LCKDGSLDNAF---------NLFNEMEI-----------------KGFKADIIT----YN 302
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLR 312
T IG G + + + S N+V+F+ ++D +V+ +L +A ++
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISP--NVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Query: 313 NSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFD 372
GI PN T++SLI + +LE + ++ D D + L++ Y K D
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 373 HSIQLFDEIE----NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLL 428
++LF E+ N +NTLV F Q G A + F EMV R ++P+ V++ LL
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 429 KGCSHAGMVEDGLNYFYSMDKI-----YGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
G G +E L F ++K G+ Y II + A K+ + D S+
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGI------YMIIIHGMCNASKVDDAWDLFCSL 534
Query: 484 PFE 486
P +
Sbjct: 535 PLK 537
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/421 (18%), Positives = 170/421 (40%), Gaps = 21/421 (4%)
Query: 32 LSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKR----NMVSWTA 87
+S+ +L +++ G P N L+N G++ A+ L DRM + N V++
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 88 MITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSG 147
++ +S + A++ +M S ++ GS+ + + G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 148 FGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGYVKNGNFEKAL 203
F ++ + L + G D K+ +M + + V ++ +ID +VK G +A
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 204 IAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLY 263
K+M+ + + S + + +++ G + + N L + Y
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 264 SKSGDMVSASNVFQSDS---GCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNE 320
K+ + +F+ S N V++ +V G+ + +LE A F ++ + + P+
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 321 FTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGL--FDHSIQLF 378
++ L+ + +LE + G++ K + D + ++ ++G C D + LF
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELD--IGIYMIIIHGMCNASKVDDAWDLF 531
Query: 379 DEIE----NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHA 434
+ + A+N ++ + A F +M + G P+ +T+ L++ +H
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR--AHL 589
Query: 435 G 435
G
Sbjct: 590 G 590
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 21/218 (9%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKR- 80
LI + L + Q+ +I GC P N L+N Y K +D ++LF MS R
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 81 ---NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
N V++ ++ GF +S + A F +M + + +L G ++ +
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKC--GEVSDACKVFEEMPCK----DEVLWTSMID 191
++ + KS EL +G + ++ C +V DA +F +P K D + MI
Sbjct: 494 EIFGKIEKSKM--ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 192 GYVKNGNFEKALIAYKKM---------VTDNVFIDQHV 220
+ + KA I ++KM +T N+ I H+
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHL 589
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/551 (19%), Positives = 237/551 (43%), Gaps = 66/551 (11%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRN 81
+++ ++ ++K ++ +I G +P N +L+ K G+L+ K++ M +RN
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268
Query: 82 M----VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
+ V++ +I GF ++ + EA MR G + ++ + +++ G
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 328
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMY--SKC--GEVSDACKVFEEMPCKDEVLWTSMIDGY 193
V ++ +G ++ ++ ++Y + C G + DA ++ M D V + +++ GY
Sbjct: 329 GVTDEMLNAG----IYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGY 384
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
+K G F +A + + + ++ H IV +
Sbjct: 385 IKMGKFVEASLLFDDLRAGDI--------------------------HPSIVTY------ 412
Query: 254 FIGNALTDLYSKSGDMVSASNVFQSDSG---CRNIVSFTAIVDGYVEMDQLEKALNAFID 310
N L D +SG++ A + + + +++++T +V G+V+ L A + +
Sbjct: 413 ---NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDE 469
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDR-DPFVSSALVDMYGKCG 369
+ GI+P+ + +++ + LH ++V + D + + +D K G
Sbjct: 470 MLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVG 529
Query: 370 LFDHSIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFV 425
+I+ +I P+ + T++ + ++G + A ++EM+ + L P+ +T+
Sbjct: 530 NLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYF 589
Query: 426 NLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPF 485
L+ G + AG +E Y M K GV P +N ++ + +AG + E ++ M
Sbjct: 590 VLIYGHAKAGRLEQAFQYSTEMKK-RGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEE 648
Query: 486 E---PTAFGWCSFLGA-CKTHGDKERAKLAAYKLM---KLEPENSGAHVLLSNIYAKERQ 538
E P + + + C +E KL YK M ++EP+ L ++ K+ +
Sbjct: 649 EGIPPNKYSYTMLISKNCDFEKWEEVVKL--YKEMLDKEIEPDGYTHRALFKHL-EKDHE 705
Query: 539 WEDVRCLRKMI 549
+V L +++
Sbjct: 706 SREVEFLERLL 716
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 14/235 (5%)
Query: 257 NALTDLYSKSGDMVSASNVFQS--DSGCR-NIVSFTAIVDGYVEMDQLEKALNAFIDLRN 313
N + + S M AS V+++ + G +++F ++D + LE+ +++++
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 266
Query: 314 SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDH 373
IE +E T++ LI + K+E HG + + F P+ + L++ Y K GLFD
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDD 326
Query: 374 SIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLK 429
+ + DE+ N P + +N + G +A E + M P+ V++ L+
Sbjct: 327 AWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMH 382
Query: 430 GCSHAG-MVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
G G VE L + + + P YN +ID L +G L+ + M
Sbjct: 383 GYIKMGKFVEASL--LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 435
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 183/454 (40%), Gaps = 51/454 (11%)
Query: 32 LSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS----KRNMVSWTA 87
+ + Q ++++ G P F L+ Y + +LD A K+F+ M +RN V++T
Sbjct: 234 VEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTH 293
Query: 88 MITGFFRSLRFREALDTFCQMRAEG--ETASQFAL-----------SSVLQACASLGSIQ 134
+I G + R EA+D F +M+ + T + + S L +
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG 353
Query: 135 FGVQVHCLVV----------------------KSGFGCELFLGSNLTDMYSKCGEVSDAC 172
+H V + G + + L + Y K G + DA
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV 413
Query: 173 KVFEEMPCK----DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSAC 228
V E M + + + +I GY K+ N KA+ KM+ V D S +
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQ 472
Query: 229 TALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS--DSGCR-NI 285
F L +++ G + + ++ D KS + A ++F S G N+
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 532
Query: 286 VSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQ 345
V +TA++DGY + ++++A + + PN TF++LI KL+ +LL +
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEK 592
Query: 346 VVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEI----ENPNDTAWNTLVGVFAQHGL 401
+VK + L+ K G FDH+ F ++ P+ + T + + + G
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 402 GRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAG 435
+A + +M + G+ P+ T+ +L+KG G
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 106/536 (19%), Positives = 201/536 (37%), Gaps = 107/536 (19%)
Query: 26 CAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKR----N 81
C+Q K K ++L Q++ G +P N L+N Y K G ++ A+ + + M R N
Sbjct: 369 CSQCK-FEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 82 MVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHC 141
++ +I G+ +S +A+ +M +S++ G+ ++
Sbjct: 428 TRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 142 LVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGYVKNG 197
L+ G + + +++ D K V +AC +F+ + K + V++T++IDGY K G
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 198 NFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGN 257
++A + +KM++ N + + + A L +VK G +
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 258 ALTDLYSKSGDMVSASNVFQS--DSG---------------CR----------------- 283
L K GD A + FQ SG CR
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 284 ----NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHG 339
++ ++++++ GY ++ Q A + +R++G EP++ TF SLIK
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK----------- 715
Query: 340 SLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQH 399
+++ + + L M ++ FD +
Sbjct: 716 -----HLLEMKYGKQKGSEPELCAM--------SNMMEFDTV------------------ 744
Query: 400 GLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEH 459
+E +MV+ + PNA ++ L+ G G + F M + G+ P E
Sbjct: 745 ------VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 460 YNCIIDLLGRAGKLKEVEDFINSMPFEPTAFGWCSFLGACKT-------HGDKERA 508
+N ++ + K E ++ M G L +CK G+KER
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDM----ICVGHLPQLESCKVLICGLYKKGEKERG 850
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 193/449 (42%), Gaps = 90/449 (20%)
Query: 156 SNLTDMYSKCGEVSDACKVFEEM----PCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVT 211
+ L + ++ G V + +V+ EM C + + M++GY K GN E+A
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA--------- 237
Query: 212 DNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVS 271
+Q+V + IV+ G + + F +L Y + D+ S
Sbjct: 238 -----NQYV---------------------SKIVEAGLDPDFFTYTSLIMGYCQRKDLDS 271
Query: 272 ASNVFQSDS--GC-RNIVSFTAIVDGYVEMDQLEKALNAFIDLRN--------------- 313
A VF GC RN V++T ++ G ++++A++ F+ +++
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 331
Query: 314 --------------------SGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDR 353
+GI+PN T++ LI + +Q K E L GQ+++
Sbjct: 332 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391
Query: 354 DPFVSSALVDMYGKCGLFDHSIQLFDEIE----NPNDTAWNTLVGVFAQHGLGRNAIETF 409
+ +AL++ Y K G+ + ++ + + +E +PN +N L+ + + + + A+
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVL 450
Query: 410 NEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGR 469
N+M++R + P+ VT+ +L+ G +G + M+ G++P + Y +ID L +
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND-RGLVPDQWTYTSMIDSLCK 509
Query: 470 AGKLKEVEDFINSMP---FEPTAFGWCSFL-GACKTHGDKERAKLAAYKLMKLE--PENS 523
+ +++E D +S+ P + + + G CK G + A L K++ P +
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA-GKVDEAHLMLEKMLSKNCLPNSL 568
Query: 524 GAHVLLSNIYAKERQWEDVRCLRKMIRDG 552
+ L+ + A + E KM++ G
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIG 597
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 121/583 (20%), Positives = 218/583 (37%), Gaps = 109/583 (18%)
Query: 65 GELDYAIKLFDRMSKRNMVSWT-AMITGFFRSL-----RF---REALDTFCQMRAEGETA 115
G+ Y + L +M+K +I G + +L RF E + +M +
Sbjct: 157 GDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCP 216
Query: 116 SQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVF 175
+ + + ++ LG+++ Q +V++G + F ++L Y + ++ A KVF
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 176 EEMPCK----DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTL-SACTA 230
EMP K +EV +T +I G ++A+ + KM D F + S C +
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 231 LK---AFSFGKSLHAIIVKFGFEYETFIGNALTDL--YSKSGDMVSASNVFQSDSGCRNI 285
+ A + K + +K T + ++L + K+ +++ N+
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ---MLEKGLMPNV 393
Query: 286 VSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKA-CANQAK--------- 335
+++ A+++GY + +E A++ + + + PN T++ LIK C +
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKM 453
Query: 336 ---------LEHGSLLHGQVVKFNFDR---------------DPFVSSALVDMYGKCGLF 371
+ + SL+ GQ NFD D + ++++D K
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 372 DHSIQLFDEIE----NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNL 427
+ + LFD +E NPN + L+ + + G A +M+ + PN++TF L
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 428 LKGCSHAG-----------MVEDGLNYFYSMDKIY-----------------------GV 453
+ G G MV+ GL S D I G
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 454 MPREEHYNCIIDLLGRAGKLKEVEDFINSMP---FEPTAFGWCSFLGACKTHGDKERAKL 510
P Y I R G+L + ED + M P F + S + K +GD +
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI---KGYGDLGQTNF 690
Query: 511 A--AYKLMKLEPENSGAHVLLSNI-------YAKERQWEDVRC 544
A K M+ H LS I Y K++ E C
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELC 733
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 104/501 (20%), Positives = 179/501 (35%), Gaps = 108/501 (21%)
Query: 28 QAKELSKGKQLHAQLIRGGC-------------------LPCTFLTNHLLNLYSKCGELD 68
++++LS + + +LI+G C LP N L++ + G D
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 69 YAIKLFDRMSKRNMV----SWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVL 124
A +L M+ R +V ++T+MI +S R EA D F + +G + ++++
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 125 QACASLG--------------------SIQFGVQVHCL---------------VVKSGFG 149
G S+ F +H L +VK G
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 150 CELFLGSNLTDMYSKCGEVSDACKVFEEMPC----KDEVLWTSMIDGYVKNGNFEKALIA 205
+ + L K G+ A F++M D +T+ I Y + G A
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 206 YKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFE-----YETFIGNALT 260
KM + V D S + L +F + + G E + + I + L
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Query: 261 DLYSKS----GDMVSASNVFQSD------------SGCRNIVSFTAIVDGYVEMDQLEKA 304
Y K ++ + SN+ + D S N S+ ++ G E+ L A
Sbjct: 720 MKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 305 LNAFIDL-RNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFD-----RDPFVS 358
F + RN GI P+E F++L+ C K H + K D P +
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCCCKLKK-------HNEAAKVVDDMICVGHLPQLE 832
Query: 359 SALVDMYGKCGLF-----DHSIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETF 409
S V + CGL+ + +F + ++ AW ++ + GL E F
Sbjct: 833 SCKVLI---CGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELF 889
Query: 410 NEMVDRGLKPNAVTFVNLLKG 430
N M G K ++ T+ L++G
Sbjct: 890 NVMEKNGCKFSSQTYSLLIEG 910
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/448 (19%), Positives = 181/448 (40%), Gaps = 80/448 (17%)
Query: 45 GGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVS----WTAMITGFFRSLRFRE 100
G C P T + L++ Y K G D AI+LFD M M +T ++ +F+ + +
Sbjct: 227 GDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEK 286
Query: 101 ALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTD 160
ALD F +M+ G + + + + +++ G + + +++ G ++ +NL +
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN 346
Query: 161 MYSKCGEVSDACKVFEEM------PC---------------------------------- 180
+ K G V + VF EM P
Sbjct: 347 ILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS 406
Query: 181 KDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSL 240
E ++ +IDGY K EKAL+ ++M CS ++A K + L
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Query: 241 HAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQ 300
E + GN + +Y+ ++ + + +
Sbjct: 467 FK-------ELKENFGNVSSRVYA-------------------------VMIKHFGKCGK 494
Query: 301 LEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSA 360
L +A++ F +++N G P+ + +++L+ + + L ++ + D +
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI 554
Query: 361 LVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRG 416
+++ + + G+ +I++F+ I++ P+ +NTL+G FA G+ A EM D+G
Sbjct: 555 ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614
Query: 417 LKPNAVTFVNLLKGCSHAGMVEDGLNYF 444
+ +A+T+ ++L + +D ++ F
Sbjct: 615 FEYDAITYSSILDAVGNVDHEKDDVSSF 642
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/507 (21%), Positives = 208/507 (41%), Gaps = 98/507 (19%)
Query: 19 VAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS 78
+++L++ +AK +SK + Q C P + N ++ + + G+ + +++ M
Sbjct: 165 LSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMC 224
Query: 79 KR-----NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSI 133
+ ++++A+I+ + + R A+ F +M+ + +Q + +
Sbjct: 225 NEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMK-----------DNCMQPTEKIYTT 273
Query: 134 QFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP---CKDEV-LWTSM 189
G+ Y K G+V A +FEEM C V +T +
Sbjct: 274 LLGI------------------------YFKVGKVEKALDLFEEMKRAGCSPTVYTYTEL 309
Query: 190 IDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGF 249
I G K G ++A YK M+ D + D L + ++ L + L + + G
Sbjct: 310 IKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI---LGKVGRVEELTNVFSEMGM 366
Query: 250 --------EYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQL 301
Y T I AL + + ++ S + ++DS + +++ ++DGY + +++
Sbjct: 367 WRCTPTVVSYNTVI-KALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRV 425
Query: 302 EKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNF-DRDPFVSSA 360
EKAL ++ G P + SLI A + E + L ++ K NF + V +
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL-KENFGNVSSRVYAV 484
Query: 361 LVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNTL------------------------ 392
++ +GKCG ++ LF+E++N P+ A+N L
Sbjct: 485 MIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Query: 393 -----------VGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGL 441
+ FA+ G+ R AIE F + G+KP+ VT+ LL +HAGM E+
Sbjct: 545 CRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAA 604
Query: 442 NYFYSMDKIYGVMPREEHYNCIIDLLG 468
M K G Y+ I+D +G
Sbjct: 605 RMMREM-KDKGFEYDAITYSSILDAVG 630
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 301 LEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVV-KFNFDRDPFVSS 359
+ KAL+ F + +P T++S+I + + E ++ ++ + + D S
Sbjct: 178 VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYS 237
Query: 360 ALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDR 415
AL+ Y K G D +I+LFDE+++ P + + TL+G++ + G A++ F EM
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA 297
Query: 416 GLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKE 475
G P T+ L+KG AG V++ ++ M + G+ P N ++++LG+ G+++E
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNILGKVGRVEE 356
Query: 476 VEDFINSMPF---EPTAFGWCSFLGA 498
+ + + M PT + + + A
Sbjct: 357 LTNVFSEMGMWRCTPTVVSYNTVIKA 382
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 106/240 (44%), Gaps = 9/240 (3%)
Query: 252 ETFIGNALTDLYSKSGDMVSASNVF-QSDSGCRNIVS--FTAIVDGYVEMDQLEKALNAF 308
+T +AL Y K G SA +F + C +T ++ Y ++ ++EKAL+ F
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 309 IDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKC 368
+++ +G P +T++ LIK +++ + +++ D + L+++ GK
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 369 GLFDHSIQLFDEIE----NPNDTAWNTLVGVFAQHGLGRNAIET-FNEMVDRGLKPNAVT 423
G + +F E+ P ++NT++ + + + + F++M + P+ T
Sbjct: 352 GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFT 411
Query: 424 FVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
+ L+ G VE L MD+ G P Y +I+ LG+A + + + +
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDE-KGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 170/404 (42%), Gaps = 20/404 (4%)
Query: 88 MITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSG 147
+I GF +S +AL +A G +A L S++ A A G + + +SG
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 334
Query: 148 FGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGYVKNGNFEKAL 203
+ L Y K G + DA + EM + DE ++ +ID YV G +E A
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 394
Query: 204 IAYKKM----VTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNAL 259
I K+M V N F+ +L K F K + +I VK ++ N +
Sbjct: 395 IVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY----NVV 450
Query: 260 TDLYSKSGDMVSASNVFQ---SDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI 316
D + K + A F S+ + V++ ++D + + + A F + G
Sbjct: 451 IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 510
Query: 317 EPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQ 376
P T++ +I + +Q + + L G++ + + LVD+YGK G F+ +I+
Sbjct: 511 LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE 570
Query: 377 LFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCS 432
+E+++ P+ T +N L+ +AQ GL A+ F M GLKP+ + +L+
Sbjct: 571 CLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFG 630
Query: 433 HAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEV 476
+ M K GV P Y ++ L R K ++V
Sbjct: 631 EDRRDAEAFAVLQYM-KENGVKPDVVTYTTLMKALIRVDKFQKV 673
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 105/520 (20%), Positives = 206/520 (39%), Gaps = 47/520 (9%)
Query: 47 CLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMVSWTAMITGFFRSLRFREALDTFC 106
C L + L++ + +L Y L + +++ A+I R+ +AL+
Sbjct: 163 CFSYELLYSILIHALGRSEKL-YEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIA 221
Query: 107 QMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCG 166
+MR +G + S V+Q+ I L +Y +
Sbjct: 222 KMRQDGYQSDFVNYSLVIQSLTRSNKID--------------------SVMLLRLYKEIE 261
Query: 167 EVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLS 226
D ++ D L +I G+ K+G+ KAL + L S +S
Sbjct: 262 R--DKLEL-------DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIIS 312
Query: 227 ACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIV 286
A ++L + + G + T NAL Y K+G + A ++ S+ R +
Sbjct: 313 ALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMV-SEMEKRGVS 371
Query: 287 ----SFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLL 342
+++ ++D YV + E A ++ ++PN F FS L+ ++ + + +
Sbjct: 372 PDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQV 431
Query: 343 HGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNTLVGVFAQ 398
++ D + ++D +GK DH++ FD + + P+ WNTL+ +
Sbjct: 432 LKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCK 491
Query: 399 HGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREE 458
HG A E F M RG P A T+ N++ D + K G++P
Sbjct: 492 HGRHIVAEEMFEAMERRGCLPCATTY-NIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 550
Query: 459 HYNCIIDLLGRAGKLKEVEDFINSMP---FEPTAFGWCSFLGACKTHGDKERAKLAAYKL 515
+ ++D+ G++G+ + + + M +P++ + + + A G E+A + A+++
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQA-VNAFRV 609
Query: 516 MK---LEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDG 552
M L+P + L++ R E L+ M +G
Sbjct: 610 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG 649
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 192/421 (45%), Gaps = 16/421 (3%)
Query: 33 SKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK----RNMVSWTAM 88
S+ L +++ GC P F ++N K G++D A+ L +M K ++V +T +
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 261
Query: 89 ITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGF 148
I +AL+ F +M +G + +S+++ + G ++ +++
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 149 GCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGYVKNGNFEKALI 204
+ S L D + K G++ +A K+++EM + D ++S+I+G+ + ++A
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 205 AYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYS 264
++ M++ + F + + + K G L + + G T N L
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 265 KSGDMVSASNVFQ---SDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEF 321
++GD A +F+ SD +I++++ ++DG + +LEKAL F L+ S +EP+ +
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 322 TFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEI 381
T++ +I+ K+E G L + + + + ++ + + GL + + LF E+
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 382 EN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMV 437
+ PN +NTL+ + G + E EM G +A T ++++ H G +
Sbjct: 562 KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST-ISMVINMLHDGRL 620
Query: 438 E 438
E
Sbjct: 621 E 621
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 193/449 (42%), Gaps = 31/449 (6%)
Query: 96 LRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLG 155
L+ +A+D F +M S + +L A A + + + + +L+
Sbjct: 59 LKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118
Query: 156 SNLTDMYSKCGEVSDACKVFEEMPC----KDEVLWTSMIDGYVKNGNFEKALIAYKKMVT 211
+ L + + + ++ A V +M D V +S+++GY +A+ +
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV-----ALV 173
Query: 212 DNVFIDQHVLCSTLSACTALKAFSFGKSLHAI-----IVKFGFEYETFIGNALTDLYSKS 266
D +F+ ++ + F K+ A+ +V G + + F + + K
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 267 GDMVSASNVFQSDSGCR---NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTF 323
GD+ A ++ + + ++V +T I+D + ALN F ++ N GI PN T+
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 324 SSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEI-- 381
+SLI+ N + S L +++ + + SAL+D + K G + +L+DE+
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 382 --ENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVED 439
+P+ +++L+ F H A F M+ + PN VT+ L+KG A VE+
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 440 GLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFE---PTAFGWCSFL 496
G+ F M + G++ YN +I L +AG + M + P + L
Sbjct: 414 GMELFREMSQ-RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 497 -GACKTHGDKERAKLAAYKLM---KLEPE 521
G CK +G E+A L ++ + K+EP+
Sbjct: 473 DGLCK-YGKLEKA-LVVFEYLQKSKMEPD 499
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/495 (19%), Positives = 198/495 (40%), Gaps = 23/495 (4%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRM---- 77
LI + +L + ++++ G P + LLN Y + A+ L D+M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 78 SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
+ N V++ +I G F + EA+ +M A G F +V+ G I +
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGY 193
+ + K ++ + + + D V+DA +F EM K + V + S+I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
G + A M+ + + + + A + L+ ++K + +
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 254 FIGNALTDLYSKSGDMVSASNVFQ---SDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID 310
F ++L + + + A ++F+ S N+V++ ++ G+ + ++E+ + F +
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGL 370
+ G+ N T+++LI+ + + ++V D S L+D K G
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 371 FDHSIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVN 426
+ ++ +F+ ++ P+ +N ++ + G + + F + +G+KPN + +
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 427 LLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFE 486
++ G G+ E+ F M K G +P YN +I R G + I M
Sbjct: 541 MISGFCRKGLKEEADALFREM-KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR-- 597
Query: 487 PTAFGWCSFLGACKT 501
C F+G T
Sbjct: 598 -----SCGFVGDAST 607
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 8/204 (3%)
Query: 20 AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK 79
+ LI L + K + +I C P N L+ + K ++ ++LF MS+
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 80 R----NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQF 135
R N V++ +I G F++ A F +M ++G S +L G ++
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMID 191
+ V + KS +++ + + + K G+V D +F + K + +++T+MI
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543
Query: 192 GYVKNGNFEKALIAYKKMVTDNVF 215
G+ + G E+A +++M D
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTL 567
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 186/445 (41%), Gaps = 17/445 (3%)
Query: 49 PCTFLTNHLLNLYSKCGELDYAIKLFDRM----SKRNMVSWTAMITGFFRSLRFREALDT 104
P T + L+N + G + A+ L DRM + ++V+ + +I G R EAL
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 105 FCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSK 164
+M G + VL G+ + + + + + S + D K
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 165 CGEVSDACKVFEEMPCK----DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHV 220
G DA +F EM K D V ++S+I G +G ++ ++M+ N+ D
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 221 LCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQ--S 278
+ + K L+ ++ G +T N+L D + K + A+ +F
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 279 DSGCR-NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLE 337
GC +IV+++ +++ Y + +++ + F ++ + G+ PN T+++L+ KL
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 338 HGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIENPNDT----AWNTLV 393
L ++V L+D G + ++++F++++ T +N ++
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 394 GVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGV 453
+A F + D+G+KP+ VT+ ++ G G + + F M K G
Sbjct: 498 HGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM-KEDGC 556
Query: 454 MPREEHYNCIIDL-LGRAGKLKEVE 477
P + YN +I LG +G + VE
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVE 581
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 181/439 (41%), Gaps = 39/439 (8%)
Query: 38 LHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS----KRNMVSWTAMITGFF 93
L +I+ LP N L + ++ + D + M + +M + T MI +
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116
Query: 94 RSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELF 153
R + A + G S+++ G + V + +V+ +L
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 176
Query: 154 LGSNLTDMYSKCGEVSDACKVFEEMP----CKDEVLWTSMIDGYVKNGNFEKALIAYKKM 209
S L + G VS+A + + M DEV + +++ K+GN AL ++KM
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 210 VTDNV---------FIDQHVLCSTLSACTALKAFSFG--KSLHAIIVKFGFEYETFIGNA 258
N+ ID LC S AL F+ K + A +V Y + IG
Sbjct: 237 EERNIKASVVQYSIVIDS--LCKDGSFDDALSLFNEMEMKGIKADVVT----YSSLIGGL 290
Query: 259 LTDLYSKSGDMVSASNVFQSDSGCRNI----VSFTAIVDGYVEMDQLEKALNAFIDLRNS 314
D G + + + G RNI V+F+A++D +V+ +L +A + ++
Sbjct: 291 CND-----GKWDDGAKMLREMIG-RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 315 GIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHS 374
GI P+ T++SLI + L + + +V + D S L++ Y K D
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 375 IQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKG 430
++LF EI + PN +NTLV F Q G A E F EMV RG+ P+ VT+ LL G
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 431 CSHAGMVEDGLNYFYSMDK 449
G + L F M K
Sbjct: 465 LCDNGELNKALEIFEKMQK 483
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 157/339 (46%), Gaps = 15/339 (4%)
Query: 182 DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKA-FSFGKSL 240
D + ++++++G+ G +A+ +MV D V STL LK S L
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDL-VTVSTLINGLCLKGRVSEALVL 197
Query: 241 HAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNI----VSFTAIVDGYV 296
+V++GF+ + + + KSG+ A ++F+ RNI V ++ ++D
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE-RNIKASVVQYSIVIDSLC 256
Query: 297 EMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPF 356
+ + AL+ F ++ GI+ + T+SSLI N K + G+ + +++ N D
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 357 VSSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEM 412
SAL+D++ K G + +L++E+ P+ +N+L+ F + A + F+ M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 413 VDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGK 472
V +G +P+ VT+ L+ A V+DG+ F + G++P YN ++ ++GK
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS-KGLIPNTITYNTLVLGFCQSGK 435
Query: 473 LKEVEDFINSM---PFEPTAFGWCSFLGACKTHGDKERA 508
L ++ M P+ + L +G+ +A
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 174/432 (40%), Gaps = 44/432 (10%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D V+ LI +S+ L +++ G P +LN K G A+ LF
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 75 DRMSKRNM----VSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
+M +RN+ V ++ +I + F +AL F +M +G A SS++ +
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 131 GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLW 186
G G ++ ++ ++ S L D++ K G++ +A +++ EM + D + +
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 187 TSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVK 246
S+IDG+ K +A + MV+ D +++ K G L I
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 247 FGFEYETFIGNALTDLYSKSGDMVSASNVFQ---SDSGCRNIVSFTAIVDGYVEMDQLEK 303
G T N L + +SG + +A +FQ S ++V++ ++DG + +L K
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 304 ALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVD 363
AL F ++ S + ++ +I N +K++ L
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF-------------------- 513
Query: 364 MYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVT 423
C L D ++ P+ +N ++G + G A F +M + G P+ T
Sbjct: 514 ----CSLSDKGVK-------PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562
Query: 424 FVNLLKGCSHAG 435
+ L++ +H G
Sbjct: 563 YNILIR--AHLG 572
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 192/454 (42%), Gaps = 56/454 (12%)
Query: 46 GCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS-KRNMVSWTAMITGFFRSLRFREALDT 104
G +P N +++ Y K GE++ A+ + DRMS ++V++ ++ S + ++A++
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 105 FCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSK 164
+M LQ I + + + SG G
Sbjct: 227 LDRM---------------LQRDCYPDVITYTILIEATCRDSGVG--------------- 256
Query: 165 CGEVSDACKVFEEMP----CKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTD----NVFI 216
A K+ +EM D V + +++G K G ++A+ M + NV
Sbjct: 257 -----HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 217 DQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVF 276
+L S S + A + L A +++ GF N L + + G + A ++
Sbjct: 312 HNIILRSMCSTGRWMDA----EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 277 Q--SDSGCR-NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQ 333
+ GC+ N +S+ ++ G+ + ++++A+ + + G P+ T+++++ A
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 334 AKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE----NPNDTAW 389
K+E + Q+ + ++D K G +I+L DE+ P+ +
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 390 NTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDK 449
++LVG ++ G AI+ F+E G++PNAVTF +++ G + + +++ M
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 450 IYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSM 483
G P E Y +I+ L G KE + +N +
Sbjct: 548 -RGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/418 (18%), Positives = 175/418 (41%), Gaps = 64/418 (15%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKR- 80
++++ + +L + ++ ++++ C P L+ + + +A+KL D M R
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269
Query: 81 ---NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
++V++ ++ G + R EA+ M + G + + +L++ S G
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP---CKDEVL-WTSMIDGY 193
++ +++ GF + + L + + G + A + E+MP C+ L + ++ G+
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
K ++A+ ++MV+ + D IV +
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPD--------------------------IVTY------ 417
Query: 254 FIGNALTDLYSKSGDMVSASNVFQ--SDSGCRNI-VSFTAIVDGYVEMDQLEKALNAFID 310
N + K G + A + S GC + +++ ++DG + + KA+ +
Sbjct: 418 ---NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKF--NFDRDPFVSSALV---DMY 365
+R ++P+ T+SSL+ + + K++ + +KF F+R +A+ M
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVD-------EAIKFFHEFERMGIRPNAVTFNSIML 527
Query: 366 GKCG------LFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGL 417
G C D + + + PN+T++ L+ A G+ + A+E NE+ ++GL
Sbjct: 528 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 79/202 (39%), Gaps = 37/202 (18%)
Query: 284 NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLH 343
+I+ T ++ G+ + + KA L SG P+ T++ +I
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISG-------------- 181
Query: 344 GQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE-NPNDTAWNTLVGVFAQHGLG 402
Y K G ++++ + D + +P+ +NT++ G
Sbjct: 182 ---------------------YCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKL 220
Query: 403 RNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNC 462
+ A+E + M+ R P+ +T+ L++ V + M + G P YN
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM-RDRGCTPDVVTYNV 279
Query: 463 IIDLLGRAGKLKEVEDFINSMP 484
+++ + + G+L E F+N MP
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMP 301
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 213/499 (42%), Gaps = 36/499 (7%)
Query: 32 LSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSKR-----NMVSWT 86
+S +++ +++ G N L+N Y G+L+ A+ + +RM + V++
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 87 AMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKS 146
++ + R + + M+ G ++ ++++ LGS++ Q+ L+ ++
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 147 GFGCELFLGSNLTDMYSKCG------EVSDACKVFEEMPCKDEVLWTSMIDGYVKNGNFE 200
+L + L + G E+ DA K + P D V + ++IDG + G
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQP--DVVTYNTLIDGCFELGLSL 362
Query: 201 KALIAYKKMVTDNVFIDQHVLCSTLS-ACTALKAFSFGKSLHAIIVKFGFEYETFIGNAL 259
+A ++M D V +Q +L C K + + + ++ GF + + L
Sbjct: 363 EARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTL 422
Query: 260 TDLYSKSGDMVSASNVFQS--DSGCR-NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGI 316
Y K GD+ A + + G + N ++ I+D + +L++A N G
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482
Query: 317 EPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKC--GLFDHS 374
+E T+ +LI + K+E + ++ K P VS+ + G C G + +
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKIT--PTVSTFNSLIGGLCHHGKTELA 540
Query: 375 IQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKG 430
++ FDE+ P+D+ +N+++ + + G A E +NE + KP+ T LL G
Sbjct: 541 MEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600
Query: 431 CSHAGMVEDGLNYFYSMDKIYGVMPREEH---YNCIIDLLGRAGKLKEVEDFINSMP--- 484
GM E LN+F ++ + RE YN +I + KLKE D ++ M
Sbjct: 601 LCKEGMTEKALNFFNTL-----IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKG 655
Query: 485 FEPTAFGWCSFLGACKTHG 503
EP F + SF+ G
Sbjct: 656 LEPDRFTYNSFISLLMEDG 674
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/461 (19%), Positives = 195/461 (42%), Gaps = 21/461 (4%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ +++ ++ LS K+L + + G +P N+L+ Y K G L A ++
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 75 DRMSKRNMV----SWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
+ M + N++ ++ +I G + RE L+ M++ ++++ C L
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL 358
Query: 131 GSIQFGVQVHCLVVK-SGFGCELFLGSNLTDMYSKCGE-----VSDACKVFEEMP--CKD 182
G ++ L+ + G + ++ + C E V+ K +M D
Sbjct: 359 G---LSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415
Query: 183 EVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHA 242
V + ++I Y+K G+ AL ++M + ++ L + L A + +L
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 243 IIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCR---NIVSFTAIVDGYVEMD 299
K GF + L + + + A ++ + + +F +++ G
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Query: 300 QLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS 359
+ E A+ F +L SG+ P++ TF+S+I + ++E + + +K +F D + +
Sbjct: 536 KTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCN 595
Query: 360 ALVDMYGKCGLFDHSIQLFDEI--ENPNDT-AWNTLVGVFAQHGLGRNAIETFNEMVDRG 416
L++ K G+ + ++ F+ + E DT +NT++ F + + A + +EM ++G
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKG 655
Query: 417 LKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPRE 457
L+P+ T+ + + G + + +G M R+
Sbjct: 656 LEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRD 696
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 39/225 (17%)
Query: 304 ALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVD 363
A F D+ G+ N TF+ L+ + KLE
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDA------------------------ 223
Query: 364 MYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVT 423
G+ + + F NP++ +NT++ ++ G + E +M GL PN VT
Sbjct: 224 ----LGMLERMVSEFK--VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVT 277
Query: 424 FVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLK---EVEDFI 480
+ NL+ G G +++ M K V+P YN +I+ L AG ++ E+ D +
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELM-KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM 336
Query: 481 NSMPFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPENSGA 525
S+ +P + + + C G L A KLM+ + EN G
Sbjct: 337 KSLKLQPDVVTYNTLIDGCFELG----LSLEARKLME-QMENDGV 376
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/457 (20%), Positives = 195/457 (42%), Gaps = 64/457 (14%)
Query: 99 REALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNL 158
REAL ++R F + + + ++ +V G+ +++
Sbjct: 3 REALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSV 62
Query: 159 TDMYSKCGEVSDACKVFEEMP---CKDEVL-WTSMIDGYVKNGNFEKALIAYKKMVTDNV 214
K G+V A + MP C+ +V+ + S+IDG+ +NG+ A + + + +
Sbjct: 63 VSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHG 122
Query: 215 FIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALT-----DLYSKSGDM 269
FI + +S + FS K L + V G + N +T D + KSG++
Sbjct: 123 FICKP---DIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGEL 179
Query: 270 VSASNVFQS---DSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSL 326
A F S D+ N+V+FT ++DGY + LE A++ + ++R + N T+++L
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 327 IKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN--- 383
I + +++ ++ ++V+ + + V + ++D + + G D++++ ++ N
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299
Query: 384 ------------------------------------PNDTAWNTLVGVFAQHGLGRNAIE 407
P+ + T++ + + G + A+
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359
Query: 408 TFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLL 467
++++++RG +P+ V ++ G + G + + + YF ++K VM Y +ID L
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-CIEKANDVM-----YTVLIDAL 413
Query: 468 GRAGKLKEVEDF---INSMPFEPTAFGWCSFL-GACK 500
+ G EVE I+ P F + S++ G CK
Sbjct: 414 CKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCK 450
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/399 (19%), Positives = 170/399 (42%), Gaps = 15/399 (3%)
Query: 47 CLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK----RNMVSWTAMITGFFRSLRFREAL 102
C P + ++ + K GEL A+K F M + N+V++T +I G+ ++ A+
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218
Query: 103 DTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMY 162
+ +MR + + ++++ G +Q +++ +V+ + + + D +
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF 278
Query: 163 SKCGEVSDACKVFEEMPCK----DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQ 218
+ G+ +A K +M + D + +I G NG ++A + M ++ D
Sbjct: 279 FQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDM 338
Query: 219 HVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS 278
+ + ++A +++ +++ GFE + + + D +K+G + A F
Sbjct: 339 VIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCI 398
Query: 279 DSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEH 338
+ N V +T ++D + + F + +G+ P++F ++S I Q L
Sbjct: 399 EKA--NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456
Query: 339 GSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNTLVG 394
L ++V+ D + L+ GL + Q+FDE+ N P+ ++ L+
Sbjct: 457 AFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIR 516
Query: 395 VFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSH 433
+ + G A + +M RGL AV+ + K C +
Sbjct: 517 AYEKEGNMAAASDLLLDMQRRGL-VTAVSDADCSKQCGN 554
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 171/405 (42%), Gaps = 23/405 (5%)
Query: 47 CLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK---RNMVSWTAMITGFFRSLRFREALD 103
C P N L N +SK LD M K N+V+++ I F +S + AL
Sbjct: 125 CKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALK 184
Query: 104 TFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYS 163
+F M+ + + + + ++ G ++ V ++ + + + + L D +
Sbjct: 185 SFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFC 244
Query: 164 KCGEVSDACKVFEEMPCKDEV-----LWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQ 218
K GE+ A +++ M +D V ++T++IDG+ + G+ + A+ KM+ + +D
Sbjct: 245 KKGEMQRAEEMYSRM-VEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDI 303
Query: 219 HVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQS 278
+S + + K + I + + Y KSG M +A N++
Sbjct: 304 TAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHK 363
Query: 279 --DSGCR-NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIE-PNEFTFSSLIKACANQA 334
+ G ++V+ + ++DG + QL +A+ F IE N+ ++ LI A +
Sbjct: 364 LIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC------IEKANDVMYTVLIDALCKEG 417
Query: 335 KLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCG----LFDHSIQLFDEIENPNDTAWN 390
L ++ + D F+ ++ + K G F ++ E + A+
Sbjct: 418 DFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYT 477
Query: 391 TLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAG 435
TL+ A GL A + F+EM++ G+ P++ F L++ G
Sbjct: 478 TLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEG 522
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/489 (22%), Positives = 194/489 (39%), Gaps = 55/489 (11%)
Query: 31 ELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK----RNMVSWT 86
+L L +++ P + LL+ +K + D I L ++M N+ +++
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 87 AMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKS 146
+I F R + AL +M G L+S+L I V + +V+
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 147 GFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGYVKNGNFEKA 202
G+ + F + L + S+A + + M K D V + +++G K G+ + A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 203 LIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDL 262
L KKM + E I N + D
Sbjct: 241 LSLLKKMEQGKI-----------------------------------EPGVVIYNTIIDA 265
Query: 263 YSKSGDMVSASNVF--QSDSGCR-NIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPN 319
++ A N+F + G R N+V++ +++ + A D+ I PN
Sbjct: 266 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325
Query: 320 EFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFD 379
TFS+LI A + KL L+ +++K + D D F S+L++ + D + +F+
Sbjct: 326 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 385
Query: 380 EIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAG 435
+ + PN +NTL+ F + +E F EM RGL N VT+ L+ G A
Sbjct: 386 LMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 445
Query: 436 MVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKE---VEDFINSMPFEPTAFGW 492
++ F M GV+P Y+ ++D L GK++ V +++ EP + +
Sbjct: 446 ECDNAQIVFKQMVS-DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
Query: 493 CSFL-GACK 500
+ G CK
Sbjct: 505 NIMIEGMCK 513
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 95/497 (19%), Positives = 199/497 (40%), Gaps = 23/497 (4%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS--- 78
LI + +LS + A++++ G P N LLN + + A+ L +M
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 79 -KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
+ + ++ +I G FR R EA+ +M +G V+ G I +
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDGY 193
+ + + + + + + D V+DA +F EM K + V + S+I
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
G + A M+ + + + + A + L+ ++K + +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 254 FIGNALTDLYSKSGDMVSASNVFQ---SDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID 310
F ++L + + + A ++F+ S N+V++ ++ G+ + ++++ + F +
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGL 370
+ G+ N T+++LI + ++ ++ Q+V D S L+D G
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 371 FDHSIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVN 426
+ ++ +F+ ++ P+ +N ++ + G + + F + +G+KPN VT+
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 427 LLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPFE 486
++ G G+ E+ F M K G +P YN +I R G + I M
Sbjct: 542 MMSGFCRKGLKEEADALFREM-KEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR-- 598
Query: 487 PTAFGWCSFLGACKTHG 503
C F+G T G
Sbjct: 599 -----SCRFVGDASTIG 610
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/428 (19%), Positives = 179/428 (41%), Gaps = 44/428 (10%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
DS LI + S+ L +++ GC P ++N K G++D A+ L
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 75 DRMSK----RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
+M + +V + +I +AL+ F +M +G + +S+++ +
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 131 GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLW 186
G ++ +++ + S L D + K G++ +A K+++EM + D +
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 187 TSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVK 246
+S+I+G+ + ++A ++ M++ + F + ++ T +K F K +
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPN------VVTYNTLIKGFCKAKRVDE---- 414
Query: 247 FGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMDQLEKALN 306
G L S+ G +V N V++T ++ G+ + + + A
Sbjct: 415 ---------GMELFREMSQRG-LVG------------NTVTYTTLIHGFFQARECDNAQI 452
Query: 307 AFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYG 366
F + + G+ P+ T+S L+ N K+E ++ + + + D + + +++
Sbjct: 453 VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC 512
Query: 367 KCGLFDHSIQLFDEIE----NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAV 422
K G + LF + PN + T++ F + GL A F EM + G P++
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Query: 423 TFVNLLKG 430
T+ L++
Sbjct: 573 TYNTLIRA 580
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/464 (21%), Positives = 180/464 (38%), Gaps = 42/464 (9%)
Query: 22 LIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK-- 79
LI ++ ++KG L + + P N L+N +S G++ A +L + M
Sbjct: 309 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG 368
Query: 80 --RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGV 137
N V++ A+I G F+EAL F M A+G T S+ + +L
Sbjct: 369 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 428
Query: 138 QVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPC----KDEVLWTSMIDGY 193
+ + ++G + + D K G + +A + EM D V ++++I+G+
Sbjct: 429 GFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 488
Query: 194 VKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYET 253
K G F+ A ++ + + + + + C + ++ ++ G +
Sbjct: 489 CKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDH 548
Query: 254 FIGNALTDLYSKSGDMVSASNVFQ---SDSGCRNIVSFTAIVDGYVEMDQLEKALNAFID 310
F N L K+G + A + SD N VSF +++GY + KA + F +
Sbjct: 549 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 608
Query: 311 LRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGL 370
+ G P FT+ SL+K L F + A VD
Sbjct: 609 MTKVGHHPTFFTYGSLLKGLCKGGHLREAE---------KFLKSLHAVPAAVD------- 652
Query: 371 FDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKG 430
+NTL+ + G A+ F EMV R + P++ T+ +L+ G
Sbjct: 653 ---------------TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 697
Query: 431 CSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLK 474
G + + + V+P + Y C +D + +AG+ K
Sbjct: 698 LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK 741
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 141/690 (20%), Positives = 256/690 (37%), Gaps = 121/690 (17%)
Query: 9 FRHKLC-DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGEL 67
+ K+C D LI K L ++ + G P N +L+ Y K G
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284
Query: 68 DYAIKLFDRMSKR----NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSV 123
AI+L D M + ++ ++ +I RS R + MR ++ +++
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 344
Query: 124 LQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK-- 181
+ ++ G + Q+ ++ G + L D + G +A K+F M K
Sbjct: 345 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 404
Query: 182 --DEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKS 239
EV + ++DG KN F+ A Y +M + V + + +
Sbjct: 405 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID------------- 451
Query: 240 LHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGCRNIVSFTAIVDGYVEMD 299
G F+ A+ L S D + +IV+++A+++G+ ++
Sbjct: 452 --------GLCKNGFLDEAVVLLNEMSKDGIDP-----------DIVTYSALINGFCKVG 492
Query: 300 QLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSS 359
+ + A + G+ PN +S+LI C L+ ++ ++ RD F +
Sbjct: 493 RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN 552
Query: 360 ALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNTLVGVFAQHGLGRNAIETFNEMVDR 415
LV K G + + + + PN +++ L+ + G G A F+EM
Sbjct: 553 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV 612
Query: 416 GLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKE 475
G P T+ +LLKG L + G L+E
Sbjct: 613 GHHPTFFTYGSLLKG------------------------------------LCKGGHLRE 636
Query: 476 VEDFINSMPFEPTAFG---WCSFLGA-CKTHGDKERAKLAAYKLMK-LEPENSGAHVLLS 530
E F+ S+ P A + + L A CK+ + L + + + P++ L+S
Sbjct: 637 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 696
Query: 531 NIYAKERQWEDVRCLRKMIRDGNM--KKLPGYSWVDIGNETHVFGVEDWSHPRKKEIY-- 586
+ K + + ++ GN+ K+ +VD +F W K IY
Sbjct: 697 GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVD-----GMFKAGQW----KAGIYFR 747
Query: 587 EKLDSL------------LDQIKIVGYVPQTESVLIEMDD-------TLKEKLLHNHSER 627
E++D+L +D +G + +T +L EM + T LLH +S+R
Sbjct: 748 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 807
Query: 628 IAVAYSLLVSPIGKPIIVKKNLRVCSDCHS 657
V+ S L+ + II+ L CHS
Sbjct: 808 KDVSTSFLLY---RSIILNGILPDKLTCHS 834
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 103/258 (39%), Gaps = 8/258 (3%)
Query: 247 FGFEYETFIGNALTDLYSKSGDMVSASNVFQ---SDSGCRNIVSFTAIVDGYVEMDQLEK 303
+GF + NA+ KSG+ VS + + C ++ +F +++ EK
Sbjct: 192 YGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEK 251
Query: 304 ALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVD 363
+ + SG P T+++++ + + + L + D D + L+
Sbjct: 252 SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIH 311
Query: 364 MYGKCGLFDHSIQLFDEIE----NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKP 419
+ L ++ +PN+ +NTL+ F+ G A + NEM+ GL P
Sbjct: 312 DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSP 371
Query: 420 NAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDF 479
N VTF L+ G G ++ L FY M+ G+ P E Y ++D L + + F
Sbjct: 372 NHVTFNALIDGHISEGNFKEALKMFYMMEA-KGLTPSEVSYGVLLDGLCKNAEFDLARGF 430
Query: 480 INSMPFEPTAFGWCSFLG 497
M G ++ G
Sbjct: 431 YMRMKRNGVCVGRITYTG 448
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 101/553 (18%), Positives = 211/553 (38%), Gaps = 73/553 (13%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + LI + K++ ++ R G P + + L+ + G L AI+++
Sbjct: 477 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 536
Query: 75 DRM----SKRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
+ M R+ ++ ++T ++ + EA + M ++G + + ++ +
Sbjct: 537 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 596
Query: 131 GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEM----PCKDEVLW 186
G V + K G F +L K G + +A K + + D V++
Sbjct: 597 GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 656
Query: 187 TSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSA-CTALKAFSFGKSLHAIIV 245
+++ K+GN KA+ + +MV ++ D + S +S C GK++ AI+
Sbjct: 657 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK------GKTVIAIL- 709
Query: 246 KFGFEYETFIGNALTD--LYSKSGDMVSASNVFQSDSGCR----------NIVSFTAIVD 293
F E E GN L + +Y+ D + + +++ R +IV+ A++D
Sbjct: 710 -FAKEAEAR-GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 767
Query: 294 GYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDR 353
GY M ++EK + ++ N PN T++ L+ + + + LL+ ++
Sbjct: 768 GYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILP 827
Query: 354 DPFVSSAL--------------------------VDMY------GKCGLFDHSIQLFDEI 381
D +L VD Y KC FD +
Sbjct: 828 DKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLV 887
Query: 382 E-------NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHA 434
+ + + + +V V ++ + + +EM +G+ P + ++ L+ G
Sbjct: 888 KVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRV 947
Query: 435 GMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVE---DFINSMPFEPTAFG 491
G ++ M + + P + ++ L + GK E F+ M PT
Sbjct: 948 GDIKTAFVVKEEMIA-HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIAS 1006
Query: 492 WCSFLGACKTHGD 504
+ + + C +G+
Sbjct: 1007 FTTLMHLCCKNGN 1019
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/404 (19%), Positives = 161/404 (39%), Gaps = 19/404 (4%)
Query: 51 TFLTNHLLNLYSKCGELDYAIKLFDRMSKRNMV----SWTAMITGFFRSLRFREALDTFC 106
T + N LL K G L A+ LF M +R+++ ++T++I+G R + A+
Sbjct: 653 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 712
Query: 107 QMRAEGET-ASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKC 165
+ A G ++ + + G + G+ + G ++ + + D YS+
Sbjct: 713 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 772
Query: 166 GEVSDACKVFEEMPCKDE----VLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVL 221
G++ + EM ++ + ++ GY K + + + Y+ ++ + + D+
Sbjct: 773 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 832
Query: 222 CSTLSACTALKAFSFG-KSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASN---VFQ 277
S + G K L A I + G E + + N L +G++ A + V
Sbjct: 833 HSLVLGICESNMLEIGLKILKAFICR-GVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 891
Query: 278 SDSGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLE 337
S + + A+V + +++ ++ GI P + LI ++
Sbjct: 892 SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 951
Query: 338 HGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNTLV 393
++ +++ SA+V KCG D + L + P ++ TL+
Sbjct: 952 TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011
Query: 394 GVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKG-CSHAGM 436
+ ++G A+E M + GLK + V++ L+ G C+ M
Sbjct: 1012 HLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDM 1055
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 124/589 (21%), Positives = 221/589 (37%), Gaps = 126/589 (21%)
Query: 21 QLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK- 79
++++ + +L L +++ LP F N LL+ +K + D I L ++M +
Sbjct: 55 EILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 80 ---RNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFG 136
N+ ++ +I F R + AL +M G S LSS+L
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG---------- 164
Query: 137 VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMP----CKDEVLWTSMIDG 192
Y +SDA + ++M D + +T++I G
Sbjct: 165 -------------------------YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
+ +A+ +MV + +V +G
Sbjct: 200 LFLHNKASEAVALVDRMVQ--------------------------RGCQPNLVTYGV--- 230
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQSDSGCR---NIVSFTAIVDGYVEMDQLEKALNAFI 309
+ N L K GD+ A N+ + N+V ++ ++D + + ALN F
Sbjct: 231 --VVNGLC----KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 284
Query: 310 DLRNSGIEPNEFTFSSLIKACAN-----------------------------------QA 334
++ N G+ PN T+SSLI N +
Sbjct: 285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG 344
Query: 335 KLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWN 390
KL L+ +++K + D D F S+L++ + D + +F+ + + PN +N
Sbjct: 345 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 391 TLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKI 450
TL+ F + +E F EM RGL N VT+ L+ G A ++ F M
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS- 463
Query: 451 YGVMPREEHYNCIIDLLGRAGKLKE---VEDFINSMPFEPTAFGWCSFL-GACKTHGDKE 506
GV P YN ++D L + GKL++ V +++ EPT + + + G CK ++
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Query: 507 RAKL-AAYKLMKLEPENSGAHVLLSNIYAKERQWEDVRCLRKMIRDGNM 554
L + L ++P+ + ++S K + E RKM DG +
Sbjct: 524 GWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPL 572
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/420 (20%), Positives = 179/420 (42%), Gaps = 42/420 (10%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D+ LI + S+ L ++++ GC P ++N K G++D A L
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 75 DRMS----KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
++M + N+V ++ +I + +AL+ F +M +G + SS++ +
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 131 GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLW 186
++ +++ + + L D + K G++ +A K+++EM + D +
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 187 TSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVK 246
+S+I+G+ + ++A ++ M++ + F + + ++ K G L + +
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428
Query: 247 FGFEYETFIGNALTDLYSKSGDMVSASNVFQ---SDSGCRNIVSFTAIVDGYVEMDQLEK 303
G T L + ++ D +A VF+ SD NI+++ ++DG + +LEK
Sbjct: 429 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 488
Query: 304 ALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVD 363
A+ F L+ S +EP +T++ +I+ K+E G D F S +L
Sbjct: 489 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG-------------WDLFCSLSLKG 535
Query: 364 MYGKCGLFDHSIQLFDEIENPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVT 423
+ P+ +NT++ F + GL A F +M + G P++ T
Sbjct: 536 V------------------KPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 164/367 (44%), Gaps = 15/367 (4%)
Query: 167 EVSDACKVFEEM----PCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLC 222
+++DA +F +M P V + ++ VK ++ + KKM + D +
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 223 STLSACTALKAFSFGKSLHAIIVKFGFEYETFIGNALTDLY---SKSGDMVSASNVFQSD 279
++ S S+ ++K G+E + +L + + ++ D VS +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 280 SGCRNIVSFTAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHG 339
+IV++ AI+D + ++ A + F ++ GI PN T+++L+ N ++
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 340 SLLHGQVVKFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIE----NPNDTAWNTLVGV 395
+ L ++K + SAL+D + K G + +LF+E+ +P+ +++L+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 396 FAQHGLGRNAIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMP 455
H A + F+ MV +G + V++ L+ G A VEDG+ F M + G++
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ-RGLVS 363
Query: 456 REEHYNCIIDLLGRAGKLKEVEDFINSMPF---EPTAFGWCSFLGACKTHGDKERAKLAA 512
YN +I +AG + + ++F + M F P + + LG +G+ E+A +
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 513 YKLMKLE 519
+ K E
Sbjct: 424 EDMQKRE 430
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/490 (18%), Positives = 202/490 (41%), Gaps = 51/490 (10%)
Query: 21 QLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMS-- 78
+L +T + +L+ L + +++ P N LL+ K + D I L +M
Sbjct: 55 RLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL 114
Query: 79 --KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFG 136
+ ++ ++ +I F + AL +M G + + S++ +
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 137 VQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMIDG 192
V + +V+ G+ ++ + + D K V+DA F+E+ K + V +T++++G
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 193 YVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVKFGFEYE 252
+ + A ++++D ++K
Sbjct: 235 LCNSSRWSDA----ARLLSD-------------------------------MIKKKITPN 259
Query: 253 TFIGNALTDLYSKSGDMVSASNVFQSD---SGCRNIVSFTAIVDGYVEMDQLEKALNAFI 309
+AL D + K+G ++ A +F+ S +IV+++++++G D++++A F
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 310 DLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVKFNFDRDPFVSSALVDMYGKCG 369
+ + G + ++++LI ++E G L ++ + + + L+ + + G
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Query: 370 LFDHSIQLFDEIE----NPNDTAWNTLVGVFAQHGLGRNAIETFNEMVDRGLKPNAVTFV 425
D + + F +++ +P+ +N L+G +G A+ F +M R + + VT+
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439
Query: 426 NLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCIIDLLGRAGKLKEVEDFINSMPF 485
+++G G VE+ + F S+ + G+ P Y ++ L G L EVE M
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSL-SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Query: 486 EPTAFGWCSF 495
E C+
Sbjct: 499 EGLMKNDCTL 508
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 11/229 (4%)
Query: 20 AQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLFDRMSK 79
+ LI + + Q+ ++ GCL N L+N + K ++ +KLF MS+
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 80 R----NMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQF 135
R N V++ +I GFF++ +A + F QM G + + + +L G ++
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 136 GVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLWTSMID 191
+ + + K ++ + + K G+V +A +F + K D V +T+M+
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Query: 192 GYVKNGNFEKALIAYKKMVTDNVFIDQHVLCS---TLSACTALKAFSFG 237
G G + Y KM + + + L TLSA K S G
Sbjct: 479 GLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCG 527
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 151/374 (40%), Gaps = 14/374 (3%)
Query: 172 CKVFEEMPCKDEVLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTAL 231
C + E P V ++ ++ K +E + ++ + + D + + +
Sbjct: 68 CDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRC 127
Query: 232 KAFSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGC---RNIVSF 288
S S ++K GFE +L + + A ++ G N+V +
Sbjct: 128 ARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIY 187
Query: 289 TAIVDGYVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVVK 348
I+D E Q+ AL+ ++ GI P+ T++SLI + + + +++
Sbjct: 188 NTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMR 247
Query: 349 FNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEI----ENPNDTAWNTLVGVFAQHGLGRN 404
D SAL+D+YGK G + + ++E+ NPN +N+L+ HGL
Sbjct: 248 MGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDE 307
Query: 405 AIETFNEMVDRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFYSMDKIYGVMPREEHYNCII 464
A + N +V +G PNAVT+ L+ G A V+DG+ M + GV YN +
Sbjct: 308 AKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSR-DGVDGDTFTYNTLY 366
Query: 465 DLLGRAGKLKEVEDFINSM---PFEPTAFGWCSFLGACKTHGDKERAKLAAYKLMKLEPE 521
+AGK E + M P + + L HG +A + +L L+
Sbjct: 367 QGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV---RLEDLQKS 423
Query: 522 NSGAHVLLSNIYAK 535
+ ++ NI K
Sbjct: 424 KTVVGIITYNIIIK 437
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/447 (19%), Positives = 168/447 (37%), Gaps = 87/447 (19%)
Query: 93 FRSLRFREALDTFCQMRAEGETASQFALSSVLQACASLGSIQFGVQVHCLVVKSGFGCEL 152
S++F +AL FC M S S +L A A L + + + + G +L
Sbjct: 55 LHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDL 114
Query: 153 FLGSNLTDMYSKCGEVSDA--------------------------CKV---FEEMPCKDE 183
+ + L D + +C +S A C V +E M D+
Sbjct: 115 YSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQ 174
Query: 184 ----------VLWTSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKA 233
V++ ++ID + G AL K M + D S ++
Sbjct: 175 IVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGT 234
Query: 234 FSFGKSLHAIIVKFGFEYETFIGNALTDLYSKSGDMVSAS---NVFQSDSGCRNIVSFTA 290
+ + + +++ G + +AL D+Y K G ++ A N S NIV++ +
Sbjct: 235 WGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNS 294
Query: 291 IVDG---YVEMDQLEKALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLEHGSLLHGQVV 347
+++G + +D+ +K LN + + G PN T+++LI +++ G + +
Sbjct: 295 LINGLCIHGLLDEAKKVLNVLV---SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMS 351
Query: 348 KFNFDRDPFVSSALVDMYGKCGLFDHSIQLFDEIEN----PNDTAWNTLVGVFAQHG-LG 402
+ D D F + L Y + G F + ++ + + P+ +N L+ HG +G
Sbjct: 352 RDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIG 411
Query: 403 RN--------------AIETFNEMVD--------------------RGLKPNAVTFVNLL 428
+ I T+N ++ +G+ P+ +T++ ++
Sbjct: 412 KALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMM 471
Query: 429 KGCSHAGMVEDGLNYFYSMDKIYGVMP 455
G + + + M K G+MP
Sbjct: 472 IGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 136/334 (40%), Gaps = 11/334 (3%)
Query: 15 DSKAVAQLIQTCAQAKELSKGKQLHAQLIRGGCLPCTFLTNHLLNLYSKCGELDYAIKLF 74
D + LI + LS ++++ G P L+N + A+ L
Sbjct: 113 DLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLV 172
Query: 75 DRMS----KRNMVSWTAMITGFFRSLRFREALDTFCQMRAEGETASQFALSSVLQACASL 130
D++ + N+V + +I + ALD M+ G +S++
Sbjct: 173 DQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHS 232
Query: 131 GSIQFGVQVHCLVVKSGFGCELFLGSNLTDMYSKCGEVSDACKVFEEMPCK----DEVLW 186
G+ ++ +++ G ++ S L D+Y K G++ +A K + EM + + V +
Sbjct: 233 GTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTY 292
Query: 187 TSMIDGYVKNGNFEKALIAYKKMVTDNVFIDQHVLCSTLSACTALKAFSFGKSLHAIIVK 246
S+I+G +G ++A +V+ F + + ++ K G + ++ +
Sbjct: 293 NSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSR 352
Query: 247 FGFEYETFIGNALTDLYSKSGDMVSASNVFQSDSGC---RNIVSFTAIVDGYVEMDQLEK 303
G + +TF N L Y ++G +A V C ++ +F ++DG + ++ K
Sbjct: 353 DGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGK 412
Query: 304 ALNAFIDLRNSGIEPNEFTFSSLIKACANQAKLE 337
AL DL+ S T++ +IK K+E
Sbjct: 413 ALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVE 446