Miyakogusa Predicted Gene
- Lj1g3v2096250.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2096250.1 Non Chatacterized Hit- tr|B9R6Q7|B9R6Q7_RICCO
Putative uncharacterized protein OS=Ricinus communis G,62.88,0,ARM
repeat,Armadillo-type fold; seg,NULL; no description,Armadillo-like
helical; Symplekin_C,Symplek,CUFF.28634.1
(1339 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27595.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Symplekin ... 741 0.0
AT5G01400.1 | Symbols: ESP4 | HEAT repeat-containing protein | c... 531 e-150
AT1G27590.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 247 5e-65
AT1G27570.1 | Symbols: | phosphatidylinositol 3- and 4-kinase f... 239 9e-63
AT1G27570.2 | Symbols: | phosphatidylinositol 3- and 4-kinase f... 160 5e-39
>AT1G27595.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Symplekin tight
junction protein C-terminal (InterPro:IPR022075); BEST
Arabidopsis thaliana protein match is: HEAT
repeat-containing protein (TAIR:AT5G01400.1); Has 593
Blast hits to 297 proteins in 111 species: Archae - 0;
Bacteria - 3; Metazoa - 139; Fungi - 49; Plants - 57;
Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink).
| chr1:9596475-9602917 FORWARD LENGTH=961
Length = 961
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/724 (56%), Positives = 511/724 (70%), Gaps = 26/724 (3%)
Query: 629 KTEVVERPGEVHQNMEENAFLDPSIPLSDLRD-EDISTEKLS--DDTGTNGPD------S 679
+ +++ P E +E + LD +PLS RD E I K S D + PD S
Sbjct: 251 REDLLTVPNECSYPSKEISSLD--VPLSPCRDDEGIRETKYSVPDLDMLSVPDFDQHSPS 308
Query: 680 PSMLEFDEFSPDVQVASTSEDTCLELPQLPPYVQQSKEQESKVKHMAIMHIIESYKHLHG 739
S+ +FD+ P + E++ EL +P YV+ + EQ V +AI IIES +H+ G
Sbjct: 309 ASVPDFDQDPPAASDITAPEESYRELDPVPSYVELTTEQSKTVGKLAIERIIESNRHVFG 368
Query: 740 TDCQQFCMPLLARLVAQIDDDNEIIVMLQKHILEDQWQ-KGXXXXXXXXXXXXXXXXXDS 798
DC + M L+ARL+A+ID +++ +L++ I D + KG D+
Sbjct: 369 FDCNKIRMALIARLIARIDAGSDVATILRELISVDHREFKGHDLVLHVLYHLHSMAILDT 428
Query: 799 DGKSSSSAVLYENFLLGVAKALLEYFPASDKSFSRLLGEAPFLPESTLKILNDLCYSDVI 858
D +SS A +YENFL+ VA++ L+ PASDKSFSRL GEAP LP+S + +L++LC +
Sbjct: 429 D-ESSFYATVYENFLISVARSFLDALPASDKSFSRLFGEAPHLPDSAINLLDELCSTR-- 485
Query: 859 DHD--GRISRDIERVTQGLGAIWGLILGRPQNRQACLEIALKCAVHPQDEIRAKAIRLVT 916
HD G+ D ERVTQGLGA+W LIL RP R+ACL IALKC+VH ++E+RAKAIRLVT
Sbjct: 486 -HDPVGKEVCDSERVTQGLGAVWSLILVRPNERKACLAIALKCSVHSEEEVRAKAIRLVT 544
Query: 917 NKLFQLSYISEDVEKFATKMLLSAVDREV-LDAVQSRPAEPRAEAQVESHEVSSTSQVSE 975
NKL+ L+YI+E VE+FAT MLL+AV+ E L S + EA+ +++ T++
Sbjct: 545 NKLYHLTYIAEHVEQFATDMLLTAVNSETNLSQTASTAEGIKMEAK---SQITLTTESLG 601
Query: 976 PTISENDSARVAKPMIQSPSISFSEAQRFISLFFALCTKKPILLQIVFDVYGKAPRTVKQ 1035
S+ S + + + IS SEAQR ISLFFALC KKP LL++VF+VYG+AP+ V Q
Sbjct: 602 SGNSDIPSQQDLQTSREVSVISISEAQRLISLFFALCKKKPSLLRLVFEVYGRAPKMVNQ 661
Query: 1036 AFHRHIPILVRALGQSYSELLPIISDPPEGSENLLTLVLQILTQDTTPSSDLISTVKHLY 1095
AFHRHIPIL+R LG SY+ELL IISDPP+GSENLLT VLQILTQ+ PS DLI+TVKHLY
Sbjct: 662 AFHRHIPILIRELGSSYTELLQIISDPPKGSENLLTYVLQILTQELAPSLDLIATVKHLY 721
Query: 1096 ETKFKDVTILVPLLSSLSKKEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPALTPVEV 1155
ETK KDV+IL+PLLSSL+K EVLPIFP L++LP EKFQ ALAHILQGSAHTGPALTP EV
Sbjct: 722 ETKLKDVSILIPLLSSLTKDEVLPIFPPLLNLPPEKFQLALAHILQGSAHTGPALTPAEV 781
Query: 1156 LVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVI 1215
L+AIH IVPEKDG LKKITDACSACFEQRTVFTQQVLAKAL QMVD+TPLPLLFMRTVI
Sbjct: 782 LIAIHDIVPEKDGPPLKKITDACSACFEQRTVFTQQVLAKALGQMVDRTPLPLLFMRTVI 841
Query: 1216 QSIDAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPQQLES 1275
Q+IDAFP LVDFVMEILSKLV KQ+WR+PKLW GFLKCV QT+P SF VLL+LP QLES
Sbjct: 842 QAIDAFPTLVDFVMEILSKLVRKQIWRLPKLWPGFLKCVSQTKPHSFPVLLELPVPQLES 901
Query: 1276 ALNKHANLRAPLASYASQPTVKSSLTRSTLAVLGLANETHVQQHLSTSLHPSEASSSVSG 1335
+ K +LR L +YA+QPT++SSL S L+VLGL N Q + +HPS+A+SS+ G
Sbjct: 902 IMKKFPDLRPSLTAYANQPTIRSSLPNSALSVLGLDN----GQDSRSQMHPSDATSSIHG 957
Query: 1336 ATLT 1339
A LT
Sbjct: 958 AALT 961
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 73/112 (65%), Gaps = 1/112 (0%)
Query: 364 VPQDNEQLANGHEAISKRIRSGPDPYLTLSAQINESGKDLXXXXXXXXXXXXLDSDLNAV 423
+PQ + NG E KR+R + +LT Q NES + DS+L V
Sbjct: 1 MPQGEDDTING-EVAPKRVRHNTNMHLTQQVQTNESLQGPVSINGISSGNHLSDSELTPV 59
Query: 424 EQMIAVIGALLAEGERGAESLEILISNIHPDLLADIVITNMKHLPKTPPPLA 475
EQM+++IGALLAEG+RGA SLEILIS +HPD+LADIVIT+MKHLP TPP LA
Sbjct: 60 EQMVSMIGALLAEGDRGAASLEILISKLHPDMLADIVITSMKHLPSTPPTLA 111
>AT5G01400.1 | Symbols: ESP4 | HEAT repeat-containing protein |
chr5:162803-171072 REVERSE LENGTH=1467
Length = 1467
Score = 531 bits (1367), Expect = e-150, Method: Compositional matrix adjust.
Identities = 312/657 (47%), Positives = 422/657 (64%), Gaps = 44/657 (6%)
Query: 679 SPSMLEFDEFSPDVQVASTSEDTCLELPQL-PPYVQQSKEQESKVKHMAIMHIIESYKHL 737
S S+ + +EFSP V + + + LP++ P V S E++ ++ + + I+E+YK +
Sbjct: 621 SMSVDKLEEFSPKA-VGTVASASQFVLPKISAPVVDLSDEEKDSLQKLVFLRIVEAYKQI 679
Query: 738 HGTDCQQFCMPLLARLVAQIDDDNEIIVMLQKHILEDQW-QKGXXXXXXXXXXXXXXXXX 796
+ Q LLA L + + + +LQ+H+L D +G
Sbjct: 680 SMSGGSQLRFSLLAHLGVEFPSELDPWKILQEHVLSDYLNHEGHELTVRVLYRLYGEAEA 739
Query: 797 DSDGKSSSSAV-LYENFLLGVAKALLEYFPASDKSFSRLLGEAPFLPESTLKILNDLCYS 855
+ D SS++A YE+FLL VA+AL + FP SDKS S+LLG++P LP+S L +L C
Sbjct: 740 EQDFFSSTTAASAYESFLLTVAEALRDSFPPSDKSLSKLLGDSPHLPKSVLMLLESFC-- 797
Query: 856 DVIDHDGRISRDIE---RVTQGLGAIWGLILGRPQNRQACLEIALKCAVHPQDEIRAKAI 912
G + +D++ RVTQGL A+W LIL RP R CL IAL+ AVH +EIR KAI
Sbjct: 798 --CPGSGEVEKDLQHGDRVTQGLSAVWSLILMRPGIRNDCLNIALQSAVHHLEEIRMKAI 855
Query: 913 RLVTNKLFQLSYISEDVEKFATKMLLSAV----DREVLDAVQSRPAEPRAEAQVESHEVS 968
RLV NKL+ LS+I+E +E+FA L S V D+ LD ++S P +P+ H +S
Sbjct: 856 RLVANKLYSLSFITEQIEEFAKDRLFSVVSDDCDKMDLD-LKSPPNKPQ-------HSIS 907
Query: 969 STSQVSEPTISENDSARVAKPMIQSPSISFSEAQRFISLFFALCTKK-------PILLQI 1021
+S T SE S+ S S +EAQR +SL+FALCTK ++ +
Sbjct: 908 G---MSMETPSEATSS----------STSVTEAQRCLSLYFALCTKVLRIFTILRLMTNL 954
Query: 1022 VFDVYGKAPRTVKQAFHRHIPILVRALGQSYSELLPIISDPPEGSENLLTLVLQILTQDT 1081
VF++Y A VKQA H IPILVR +G S SELL II+DPP GS+NLL VLQ LT+
Sbjct: 955 VFNIYKNASDPVKQAIHLQIPILVRTMGSS-SELLKIIADPPSGSDNLLIQVLQTLTEGP 1013
Query: 1082 TPSSDLISTVKHLYETKFKDVTILVPLLSSLSKKEVLPIFPRLVDLPLEKFQRALAHILQ 1141
TPSS+LI T++ L++T+ KDV IL P+L L + +VL IFP +V+LP+EKFQ AL+ +LQ
Sbjct: 1014 TPSSELILTIRKLFDTRIKDVEILFPILPFLPRDDVLRIFPHMVNLPMEKFQVALSRVLQ 1073
Query: 1142 GSAHTGPALTPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMV 1201
GS+ +GP L+P E L+AIH I P +DG+ LK++TDAC+ CF QR FTQQVLA LNQ+V
Sbjct: 1074 GSSQSGPVLSPSEALIAIHSIDPARDGIPLKQVTDACNTCFAQRQTFTQQVLAGVLNQLV 1133
Query: 1202 DQTPLPLLFMRTVIQSIDAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQTQPRS 1261
Q PLP+LFMRTV+Q+I AFPAL DF++EILS+LV+KQ+W+ PKLWVGFLKC TQP+S
Sbjct: 1134 QQIPLPMLFMRTVLQAIGAFPALSDFILEILSRLVSKQIWKYPKLWVGFLKCTQTTQPQS 1193
Query: 1262 FHVLLQLPPQQLESALNKHANLRAPLASYASQPTVKSSLTRSTLAVLGLANETHVQQ 1318
+ VLLQLPP QL +AL K LRAPL ++ASQP ++SSL RSTLAVLGL ++ Q
Sbjct: 1194 YKVLLQLPPLQLGNALTKIPALRAPLTAHASQPEIQSSLPRSTLAVLGLVPDSQGTQ 1250
Score = 201 bits (510), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 215/430 (50%), Gaps = 28/430 (6%)
Query: 51 PYLLELQSSPESLVRKLLIQIIEEIGFKAAEDSPKLISVLLTFLRDSDVEVVKQSIVSGS 110
P+L +L S VRK + +I+ EIG K E P+++ +L+ L D V +Q I G+
Sbjct: 49 PHLFDLLSDQFGAVRKFVAEILGEIGLKYVELIPEIVPLLIKSLEDETPAVARQVIACGA 108
Query: 111 NIFCSGFEELVVQFQQCGKVERWLEEIWMWMHRFKDAVFGIALEPGAVGIKLLALKFLET 170
++F S E + VQ ++ LE W W+ +FKD + +A + G G+KL A+KF+E
Sbjct: 109 DLFRSTLERVAVQGLHSSELNDLLESSWTWLIKFKDEICSVAFKQGNSGVKLCAMKFVEA 168
Query: 171 FILLFTSDNSNPDKPATEGVRKAVNISWLVGGHPVLDPVVLMSEANRTLGTLLNLLQ--S 228
ILL+T EG+ NIS L GGHPVL L EA++ LG LL+ L+ +
Sbjct: 169 LILLYTPH---------EGIEADFNISILRGGHPVLKIGDLSIEASQKLGLLLDQLRHPA 219
Query: 229 AGSLPGCLTITVVNCLAAIARKRPQHYDTILSAMLDFNPNFQTVKGCHVASIQYSLRTTF 288
A SL I ++N L+++A+KRP + IL +L +P +KG + A+ +L+T F
Sbjct: 220 AKSLNSSTIIVLINSLSSVAKKRPAYCGRILPVLLSLDP-LSFLKGVYAAATNLALKTVF 278
Query: 289 LGFLRCTY---SPXXXXXXXXXXXXXGMNAGDAADQVIRQVDKMIKNGDRSTRDARASKD 345
L L+CT+ +P G A A + + + I++ D S D + S +
Sbjct: 279 LSCLKCTHPAAAPDRLTSALKEIEGGGQAA--KAKDLFYKTNGSIQDKD-SVEDTKVSVE 335
Query: 346 EVPSTQSPVSGE--LSRKRPVPQDNEQLANGHEAISKRIRSGPDPYLTLSAQINESGKDL 403
E P S E LSRKR + N L NG + KR R P + +N G D
Sbjct: 336 ENPLCASSDVAESNLSRKRSGSEYNIDL-NGDASDGKRARITPSVSEESTDGLN--GNDG 392
Query: 404 XXXXXXXXXXXXLD-----SDLNAVEQMIAVIGALLAEGERGAESLEILISNIHPDLLAD 458
SD +Q++ + G L+++GE+ SLEILIS+I DLL D
Sbjct: 393 VSLPRVASTSTGPSDSRGVSDSGPAQQLVGLFGTLVSQGEKAIGSLEILISSISADLLTD 452
Query: 459 IVITNMKHLP 468
+V+ NM ++P
Sbjct: 453 VVMANMHNIP 462
>AT1G27590.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF3453 (InterPro:IPR021850); BEST
Arabidopsis thaliana protein match is:
phosphatidylinositol 3- and 4-kinase family protein
(TAIR:AT1G27570.1); Has 109 Blast hits to 109 proteins
in 38 species: Archae - 0; Bacteria - 0; Metazoa - 65;
Fungi - 4; Plants - 38; Viruses - 0; Other Eukaryotes -
2 (source: NCBI BLink). | chr1:9592293-9593912 FORWARD
LENGTH=264
Length = 264
Score = 247 bits (630), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 155/224 (69%)
Query: 19 NNHGDLSVKTSSLKQAKXXXXXXXXXXXXXXYPYLLELQSSPESLVRKLLIQIIEEIGFK 78
NNHGDL+VK SSL+Q K +PYL EL S E LVRK LI+IIEE+G +
Sbjct: 21 NNHGDLAVKLSSLRQVKEILLSLEPSLSAEIFPYLAELHLSREILVRKSLIEIIEEVGLR 80
Query: 79 AAEDSPKLISVLLTFLRDSDVEVVKQSIVSGSNIFCSGFEELVVQFQQCGKVERWLEEIW 138
+ S L+SVLL RD D V K+SI G+ FC+ EE+ +QF GKV+RW E+W
Sbjct: 81 MLDHSYVLVSVLLVLSRDEDPTVAKKSISVGTTFFCTILEEMAMQFHHRGKVDRWCGELW 140
Query: 139 MWMHRFKDAVFGIALEPGAVGIKLLALKFLETFILLFTSDNSNPDKPATEGVRKAVNISW 198
WM +FKD VF ALEPG VG+K+LALKF+ETFILLFT D S+P+K ++EG R NISW
Sbjct: 141 TWMVKFKDTVFATALEPGCVGVKVLALKFMETFILLFTPDASDPEKASSEGSRHMFNISW 200
Query: 199 LVGGHPVLDPVVLMSEANRTLGTLLNLLQSAGSLPGCLTITVVN 242
L GGHP+L+P LMSEANRT G L++ +QSA LPG LTI+V++
Sbjct: 201 LAGGHPILNPATLMSEANRTFGILVDFIQSANRLPGALTISVIS 244
>AT1G27570.1 | Symbols: | phosphatidylinositol 3- and 4-kinase
family protein | chr1:9575538-9582376 FORWARD LENGTH=649
Length = 649
Score = 239 bits (610), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 204/356 (57%), Gaps = 39/356 (10%)
Query: 1 MAAPP--PTKDQVLSLLAAANNHGDLSVKTSSLKQAKXXXXXXXXXXXXXXYPYLLELQS 58
MAAP TK Q L+LLAAA NHGDL+VK SSLK+ K +PYL EL
Sbjct: 1 MAAPADATTKGQALALLAAAKNHGDLAVKLSSLKEVKEILLSLEPSLSAEIFPYLRELCL 60
Query: 59 SPESLVRKLLIQIIEEIGFKAAEDSPKLISVLLTFLRDSDVEVVKQSIVSGSNIFCSGFE 118
SPE LVR+ LI+IIEE+G + E S L+SVL+ + D+D V ++SI +G+ F S E
Sbjct: 61 SPEVLVRRSLIEIIEEVGLRMLEHSYVLVSVLIHLVGDNDPTVAEKSISTGTTFFRSILE 120
Query: 119 ELVVQFQQCGKVERWLEEIWMWMHRFKDAVFGIA--LEPG-AVGIKLLALKFLETFILLF 175
++ QF GKV+RW +W M FKDAVF IA LEPG VG+K+LALKF+ETFILL
Sbjct: 121 KMETQFHHRGKVDRWCVNLWTLMLMFKDAVFNIALDLEPGRVVGVKVLALKFMETFILLI 180
Query: 176 TSDNSNPDKPAT--EGVRKAVNISWLVGGHPVLDPVVLMSEANRTLGTLLNLLQSAGSLP 233
T S+P+K +T EG R+ +NIS L G P+L+ LMSE N+TL L + LQ+ +
Sbjct: 181 TPHASDPEKVSTSSEGSRQMINISSLAAGLPMLNLTGLMSEVNQTLVRLGSFLQAPTLIQ 240
Query: 234 GCLTITVVNC-----LAAIARKRPQHYDTILSAMLDFNPNFQTVKGCHVASIQYSLRTTF 288
L I V++C LA +ARKRP HYDT+LS
Sbjct: 241 DALPIAVIDCSLSFSLAVVARKRPVHYDTVLSV--------------------------- 273
Query: 289 LGFLRCTYSPXXXXXXXXXXXXXGMNAGDAADQVIRQVDKMIKNGDRSTRDARASK 344
LGFL+CT SP M+ D +DQV+R+VD++ + + + + R+S+
Sbjct: 274 LGFLKCTSSPIVESRDLLFRAFPAMDPADISDQVVREVDELFRVNEHAANENRSSQ 329
>AT1G27570.2 | Symbols: | phosphatidylinositol 3- and 4-kinase
family protein | chr1:9575538-9582376 FORWARD LENGTH=640
Length = 640
Score = 160 bits (405), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 129/363 (35%), Positives = 175/363 (48%), Gaps = 62/363 (17%)
Query: 1 MAAPP--PTKDQVLSLLAAANNHGDLSVKTSSLKQAKXXXXXXXXXXXXXXYPYLLELQS 58
MAAP TK Q L+LLAAA NHGDL+VK SSLK+ K +PYL EL
Sbjct: 1 MAAPADATTKGQALALLAAAKNHGDLAVKLSSLKEVKEILLSLEPSLSAEIFPYLRELCL 60
Query: 59 SPESLVRKLLIQIIEEIGFKAAEDSPKLISVLLTFLRDSDVEVVKQSIVSGSNIFCSGFE 118
SPE LVR+ LI+IIEE+ K IS TF R S +E ++ + + S + G+
Sbjct: 61 SPEVLVRRSLIEIIEEV--------EKSISTGTTFFR-SILEKMETQVHTVSQV---GY- 107
Query: 119 ELVVQFQQCGKVERWLEEIWMWMHRFKDAVFGIALEPGAVGIKLLALKFLETFILLFTSD 178
+ F GKV+RW +W M FKDAVF IAL+ L+ L F L
Sbjct: 108 ---LVFHHRGKVDRWCVNLWTLMLMFKDAVFNIALDLERRYYVLIMQFLLLLFRLYCILS 164
Query: 179 NSNPD------------KPATEGVRKAVNISWLVGGHPVLDPVVLMSEANRTLGTLLNLL 226
+ P +T G R+ +NIS L G P+L+ LMSE N+TL L + L
Sbjct: 165 GTAPYMLCSFCCARVNFSNSTAGSRQMINISSLAAGLPMLNLTGLMSEVNQTLVRLGSFL 224
Query: 227 QSAGSLPGCLTITVVNC-----LAAIARKRPQHYDTILSAMLDFNPNFQTVKGCHVASIQ 281
Q+ + L I V++C LA +ARKRP HYDT+LS
Sbjct: 225 QAPTLIQDALPIAVIDCSLSFSLAVVARKRPVHYDTVLSV-------------------- 264
Query: 282 YSLRTTFLGFLRCTYSPXXXXXXXXXXXXXGMNAGDAADQVIRQVDKMIKNGDRSTRDAR 341
LGFL+CT SP M+ D +DQV+R+VD++ + + + + R
Sbjct: 265 -------LGFLKCTSSPIVESRDLLFRAFPAMDPADISDQVVREVDELFRVNEHAANENR 317
Query: 342 ASK 344
+S+
Sbjct: 318 SSQ 320