Miyakogusa Predicted Gene

Lj1g3v2095670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2095670.1 Non Chatacterized Hit- tr|B9R6S8|B9R6S8_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,33.18,0.000000000000008,seg,NULL; coiled-coil,NULL,CUFF.28462.1
         (215 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G22795.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    49   4e-06

>AT2G22795.1 | Symbols:  | unknown protein; BEST Arabidopsis
          thaliana protein match is: unknown protein
          (TAIR:AT4G37820.1); Has 799854 Blast hits to 188815
          proteins in 4452 species: Archae - 4529; Bacteria -
          144236; Metazoa - 287749; Fungi - 87083; Plants -
          43826; Viruses - 3662; Other Eukaryotes - 228769
          (source: NCBI BLink). | chr2:9697380-9699584 REVERSE
          LENGTH=734
          Length = 734

 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 1  MLKQLPNRNQRTKGSMIKQGFKIFTLIAVIIWLLFQLNHSLDKRKPNEDNTKVFEKLKAS 60
          M +  P R QR+KG  +K   ++  L++V IWLL+Q+ HS +K+   E++ K+       
Sbjct: 1  MFRSSPRRGQRSKGFKVKHCIQLTLLLSVGIWLLYQVKHSHEKKAQFEESAKIVVGGVDK 60

Query: 61 HESKKLGRKWFQPWI 75
              KLGRK   P +
Sbjct: 61 V--VKLGRKDLIPRV 73