Miyakogusa Predicted Gene
- Lj1g3v2068760.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2068760.1 tr|G7J3F4|G7J3F4_MEDTR Dioxygenase RAMOSUS1
OS=Medicago truncatula GN=MTR_3g109610 PE=4
SV=1,83.13,0,RPE65,Carotenoid oxygenase; BETA-CAROTENE
DIOXYGENASE,NULL; BETA-CAROTENE DIOXYGENASE,Carotenoid
oxy,CUFF.28436.1
(566 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G32810.1 | Symbols: CCD8, MAX4, ATCCD8 | carotenoid cleavage ... 715 0.0
AT1G30100.1 | Symbols: NCED5, ATNCED5 | nine-cis-epoxycarotenoid... 99 7e-21
AT3G24220.1 | Symbols: NCED6, ATNCED6 | nine-cis-epoxycarotenoid... 95 2e-19
AT4G19170.1 | Symbols: NCED4, CCD4 | nine-cis-epoxycarotenoid di... 95 2e-19
AT3G63520.1 | Symbols: CCD1, ATCCD1, ATNCED1, NCED1 | carotenoid... 94 3e-19
AT3G14440.1 | Symbols: NCED3, ATNCED3, STO1, SIS7 | nine-cis-epo... 87 4e-17
AT1G78390.1 | Symbols: NCED9, ATNCED9 | nine-cis-epoxycarotenoid... 84 2e-16
AT4G18350.1 | Symbols: NCED2, ATNCED2 | nine-cis-epoxycarotenoid... 77 4e-14
>AT4G32810.1 | Symbols: CCD8, MAX4, ATCCD8 | carotenoid cleavage
dioxygenase 8 | chr4:15828348-15831299 FORWARD
LENGTH=570
Length = 570
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/521 (64%), Positives = 421/521 (80%), Gaps = 16/521 (3%)
Query: 52 VANVASPSVPVIAPQREEPSGTSDDGHSQHHHVAWTSIPRERWEGELAVQGQIPFWLKGT 111
V N A+PS P+ P++E+ G + HVAWTS+ +E WEGEL VQG+IP WL GT
Sbjct: 58 VINSAAPS-PL--PEKEKVEG------ERRCHVAWTSVQQENWEGELTVQGKIPTWLNGT 108
Query: 112 YIRNGPGMWHIGDYNFRHLFDGYATLVKLNFENGRLIAGHRQIESQAYEAAKKNQKICYR 171
Y+RNGPG+W+IGD++FRHLFDGY+TLVKL F+ GR+ A HR +ES AY+AAKK+ ++CYR
Sbjct: 109 YLRNGPGLWNIGDHDFRHLFDGYSTLVKLQFDGGRIFAAHRLLESDAYKAAKKHNRLCYR 168
Query: 172 EFSEVPKA----ESFLAYVGELASLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVI 227
EFSE PK+ ++ + +GE+ LFSG SLTDNANTGV+KLGDGRV+CLTETQKGSI++
Sbjct: 169 EFSETPKSVIINKNPFSGIGEIVRLFSGESLTDNANTGVIKLGDGRVMCLTETQKGSILV 228
Query: 228 DPDTLDTLRKFEYSDSLGG-LIHSAHPIVTDNEFLTLLPDLVRPGYLVVRMEPGTNERKV 286
D +TL+T+ KFEY D L +I SAHPIVT+ E TL+PDLV+PGY VVRME G+N+R+V
Sbjct: 229 DHETLETIGKFEYDDVLSDHMIQSAHPIVTETEMWTLIPDLVKPGYRVVRMEAGSNKREV 288
Query: 287 IGRVDCRGGP-SPGWVHSFPATDHYVIVPEMPLRYCAQNLLKAEPTPLYKFQWHPESKAF 345
+GRV CR G PGWVHSF T++YV++PEMPLRY +NLL+AEPTPLYKF+W P+ AF
Sbjct: 289 VGRVRCRSGSWGPGWVHSFAVTENYVVIPEMPLRYSVKNLLRAEPTPLYKFEWCPQDGAF 348
Query: 346 MHVMCKTSGKIVASVEVPLFITFHFINAYEEEDE-DGRVTAVIADCCEHNSNTDILERLR 404
+HVM K +G++VASVEVP ++TFHFINAYEE+ DG+ T +IADCCEHN++T IL+ LR
Sbjct: 349 IHVMSKLTGEVVASVEVPAYVTFHFINAYEEDKNGDGKATVIIADCCEHNADTRILDMLR 408
Query: 405 LQNLRSFNGQDVLPDAKVGRFRIPLDGSPNGTLEPALDPNEHGKGMDMCSINPNYLGKKY 464
L LRS +G DVLPDA++GRFRIPLDGS G LE A++ +HG+ MDMCSINP YLG+KY
Sbjct: 409 LDTLRSSHGHDVLPDARIGRFRIPLDGSKYGKLETAVEAEKHGRAMDMCSINPLYLGQKY 468
Query: 465 RYAYACGANRPCNFPNTLTKLDLELKKAKTWYDEGAVPSEPFFVARPGATEEDDGVVISI 524
RY YACGA RPCNFPN L+K+D+ KK K W++ G +PSEPFFV RPGAT EDDGVVISI
Sbjct: 469 RYVYACGAQRPCNFPNALSKVDIVEKKVKNWHEHGMIPSEPFFVPRPGATHEDDGVVISI 528
Query: 525 ISGKNGEGYALLLDGSTFEEIARAEFPHGIPYGLHGCWVPK 565
+S +NG +A+LLDGS+FEEIARA+FP+G+PYGLHGCW+PK
Sbjct: 529 VSEENGGSFAILLDGSSFEEIARAKFPYGLPYGLHGCWIPK 569
>AT1G30100.1 | Symbols: NCED5, ATNCED5 | nine-cis-epoxycarotenoid
dioxygenase 5 | chr1:10571383-10573152 FORWARD
LENGTH=589
Length = 589
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 127/502 (25%), Positives = 209/502 (41%), Gaps = 62/502 (12%)
Query: 86 WTSIPRERWEGELAVQGQIPFWLKGTYIRNG--PGMWHIGDYNFRHLFDGYATLVKLNFE 143
+ +P + + L+V G+IP + G Y+RNG P + + HLFDG + +
Sbjct: 117 YAPVPEQSVKSSLSVDGKIPDCIDGVYLRNGANPLFEPVSGH---HLFDGDGMVHAVKIT 173
Query: 144 NGRLIAGHRQIESQAYEAAKK-NQKICYREFSEVPK----AESFLAYVGELASLFSGASL 198
NG R E++ K+ I + E+ A L Y L L + +
Sbjct: 174 NGDASYSCRFTETERLVQEKQLGSPIFPKAIGELHGHSGIARLMLFYARGLFGLLNHKNG 233
Query: 199 TDNANTGVVKLGDGRVVCLTETQ--KGSIVIDPDTLDTLRKFEYSDSLGGLIHSAHPIV- 255
T AN G+V D R++ ++E V D L+T+ +F++ L + AHP +
Sbjct: 234 TGVANAGLVYFHD-RLLAMSEDDLPYQVRVTDNGDLETIGRFDFDGQLSSAM-IAHPKID 291
Query: 256 -TDNEFLTLLPDLVRPGYLVVRMEPGTNERKVIGRVDCRGGPSPGWVHSFPATDHYVIVP 314
E L D+V+ YL E+ + SP +H F T+++V++P
Sbjct: 292 PVTKELFALSYDVVKKPYLKYFKFSPEGEKSPDVEIPLA---SPTMMHDFAITENFVVIP 348
Query: 315 EMPLRYCAQNLLKAEPTPLYKFQWHPESKAFMHVMCKTSGKIVASVEVPLFITFHFINAY 374
+ + + ++ + +P+ K+ S+ + + VE P FH NA+
Sbjct: 349 DQQVVFKLSDMFLGK-SPV-KYDGEKISRFGILPRNAKDASEMVWVESPETFCFHLWNAW 406
Query: 375 EEEDEDGRVTAVIADC----------CEHNSNTDILERLRLQNLRSFNGQDVLPDAKVGR 424
E + D V VI C C+ N+ +L +RL NL++ K R
Sbjct: 407 ESPETDEVV--VIGSCMTPADSIFNECDEQLNS-VLSEIRL-NLKT---------GKSTR 453
Query: 425 FRIPLDGSPNGTLEPALDPNEHGKGMDMCSINPNYLGKKYRYAYACGANRPCNFPNTLTK 484
R + GS LE + +N N LG+K RYAY A P + K
Sbjct: 454 -RTIIPGSVQMNLEAGM-------------VNRNLLGRKTRYAYLAIA-EPWPKVSGFAK 498
Query: 485 LDLELKKAKT-WYDEGAVPSEPFFVARPGATE-EDDGVVISIISGKNG-EGYALLLDGST 541
+DL + K +Y EPFF+ R ++ EDDG ++S + + E +++ T
Sbjct: 499 VDLSTGEVKNHFYGGKKYGGEPFFLPRGLESDGEDDGYIMSFVHDEESWESELHIVNAVT 558
Query: 542 FEEIARAEFPHGIPYGLHGCWV 563
E A + P +PYG HG +V
Sbjct: 559 LELEATVKLPSRVPYGFHGTFV 580
>AT3G24220.1 | Symbols: NCED6, ATNCED6 | nine-cis-epoxycarotenoid
dioxygenase 6 | chr3:8761439-8763172 FORWARD LENGTH=577
Length = 577
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 207/491 (42%), Gaps = 65/491 (13%)
Query: 98 LAVQGQIPFWLKGTYIRNG--PGMWHIGDYNFRHLFDGYATL--VKLNFENG-----RLI 148
L V GQIP LKG YIRNG P + + HLFDG + V + F+N R
Sbjct: 117 LEVVGQIPSCLKGVYIRNGANPMFPPLAGH---HLFDGDGMIHAVSIGFDNQVSYSCRYT 173
Query: 149 AGHRQIESQAYEAAKKNQKIC-YREFSEVPKAESFLAYVGELASLFSGASLTDNANTGVV 207
+R ++ A + + I S + + F A G L G AN GVV
Sbjct: 174 KTNRLVQETALGRSVFPKPIGELHGHSGLARLALFTARAG--IGLVDGTRGMGVANAGVV 231
Query: 208 KLGDGRVVCLTETQ-KGSIVIDPD-TLDTLRKFEYSDSLGGLIHSAHPIV--TDNEFLTL 263
+GR++ ++E + ID L+T+ +F + D + + AHP V T + TL
Sbjct: 232 -FFNGRLLAMSEDDLPYQVKIDGQGDLETIGRFGFDDQIDSSV-IAHPKVDATTGDLHTL 289
Query: 264 LPDLVRPGYL--VVRMEPGTNERKVIGRVDCRGGPSPGWVHSFPATDHYVIVPEMPLRYC 321
++++ +L + G R V + P P +H F T+++V++P+ + +
Sbjct: 290 SYNVLKKPHLRYLKFNTCGKKTRDVEITL-----PEPTMIHDFAITENFVVIPDQQMVFK 344
Query: 322 AQNLLKAEPTPLYKFQWHPESKAFMHVMCKT--SGKIVASVEVPLFITFHFINAYEEEDE 379
+++ +Y E A V+ K +G + V+VP FH NA+EE E
Sbjct: 345 LSEMIRGGSPVIYV----KEKMARFGVLSKQDLTGSDINWVDVPDCFCFHLWNAWEERTE 400
Query: 380 DGRVTAVIADCCEHNSNTDILE-----RLRLQNLRSFNGQDVLPDAKVGRFRIPLDGSPN 434
+G V+ C +T E R+ L +R N + + KV
Sbjct: 401 EGDPVIVVIGSCMSPPDTIFSESGEPTRVELSEIR-LNMRTKESNRKV------------ 447
Query: 435 GTLEPALDPNEHGKGMDMCSINPNYLGKKYRYAYACGANRPCNFPNTLTKLDLELKKAKT 494
G ++ IN +Y+G+K ++ Y A+ P + + K+D++
Sbjct: 448 ---------IVTGVNLEAGHINRSYVGRKSQFVYIAIAD-PWPKCSGIAKVDIQNGTVSE 497
Query: 495 W-YDEGAVPSEPFFVARPGATEEDDGVVISIISG-KNGEGYALLLDGSTFEEIARAEFPH 552
+ Y EP FV G EED G V+ + + E +++D + +++A P
Sbjct: 498 FNYGPSRFGGEPCFVPE-GEGEEDKGYVMGFVRDEEKDESEFVVVDATDMKQVAAVRLPE 556
Query: 553 GIPYGLHGCWV 563
+PYG HG +V
Sbjct: 557 RVPYGFHGTFV 567
>AT4G19170.1 | Symbols: NCED4, CCD4 | nine-cis-epoxycarotenoid
dioxygenase 4 | chr4:10481835-10483622 FORWARD
LENGTH=595
Length = 595
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 198/492 (40%), Gaps = 62/492 (12%)
Query: 100 VQGQIPFWLKGTYIRNGPGMWHI--GDYNFRHLFDGYATLVKLNFENGRLIAGHRQIESQ 157
+ G +P L G YIRNGP + G Y HLFDG L + NG+ R +++
Sbjct: 130 IHGTLPLSLNGAYIRNGPNPQFLPRGPY---HLFDGDGMLHAIKIHNGKATLCSRYVKTY 186
Query: 158 AYEAAKKN----QKICYREFSEVPK--AESFLAYVGELASLFSGASLTDNANTGVVKLGD 211
Y K+ + F+ V A L L ++ + ANT + +
Sbjct: 187 KYNVEKQTGAPVMPNVFSGFNGVTASVARGALTAARVLTGQYNPVNGIGLANTSLAFFSN 246
Query: 212 GRVVCLTETQKGSIV--IDPDTLDTLRKFEYSDSLGGLIHSAHPIV--TDNEFLTLLPDL 267
R+ L E+ V + ++T+ ++++ L + +AHP E
Sbjct: 247 -RLFALGESDLPYAVRLTESGDIETIGRYDFDGKLA-MSMTAHPKTDPITGETFAFRYGP 304
Query: 268 VRPGYLVVRMEPGTNERKVIGRVDCRGGPSPGWVHSFPATDHYVIVPEMPL--RYCAQNL 325
V P R + +++ V SP ++H F T + I E+ L R +L
Sbjct: 305 VPPFLTYFRFDSAGKKQR---DVPIFSMTSPSFLHDFAITKRHAIFAEIQLGMRMNMLDL 361
Query: 326 LKAEPTPLYKFQWHPESKAFMHVMCKTSG--KIVASVEVPLFITFHFINAYEEEDEDGRV 383
+ +P+ + V+ K +G + EVP F H INA++E+D G
Sbjct: 362 VLEGGSPVGTDNGKTPR---LGVIPKYAGDESEMKWFEVPGFNIIHAINAWDEDD--GNS 416
Query: 384 TAVIADCCEHNSNTDILERLRLQNLRSFNGQDVLPDAKVGRFRIPLDGSPNGTLEPALDP 443
+IA +T LER+ L + + L V R I
Sbjct: 417 VVLIAPNIMSIEHT--LERMDLVHALVEKVKIDLVTGIVRRHPI---------------- 458
Query: 444 NEHGKGMDMCSINPNYLGKKYRYAYACGANRPCNFPNTLTKLDL------ELKKAKTWYD 497
+ +D INP +LG+ RY YA + P + + KLD+ + A+ Y
Sbjct: 459 --SARNLDFAVINPAFLGRCSRYVYAAIGD-PMPKISGVVKLDVSKGDRDDCTVARRMYG 515
Query: 498 EGAVPSEPFFVAR-PG--ATEEDDGVVISIISGK-NGEGYALLLDGST--FEEIARAEFP 551
G EPFFVAR PG EEDDG V++ + + GE L++D + E +A P
Sbjct: 516 SGCYGGEPFFVARDPGNPEAEEDDGYVVTYVHDEVTGESKFLVMDAKSPELEIVAAVRLP 575
Query: 552 HGIPYGLHGCWV 563
+PYG HG +V
Sbjct: 576 RRVPYGFHGLFV 587
>AT3G63520.1 | Symbols: CCD1, ATCCD1, ATNCED1, NCED1 | carotenoid
cleavage dioxygenase 1 | chr3:23452940-23455896 FORWARD
LENGTH=538
Length = 538
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 129/510 (25%), Positives = 204/510 (40%), Gaps = 83/510 (16%)
Query: 97 ELAVQGQIPFWLKGTYIRNGPG--MWHIGDYNFRHLFDGYATLVKLNFENGRLIAGHRQI 154
+L V G +P L G ++R GP + Y H FDG + + ++G+ R +
Sbjct: 64 DLPVHGFLPECLNGEFVRVGPNPKFDAVAGY---HWFDGDGMIHGVRIKDGKATYVSRYV 120
Query: 155 ESQAYEAAKKNQKICYREFSEVPKAESFLAYVG-ELASLFSGASLTDN------ANTGVV 207
++ K+ + +F ++ + F + + L + + DN ANT +V
Sbjct: 121 KTSR---LKQEEFFGAAKFMKIGDLKGFFGLLMVNVQQLRTKLKILDNTYGNGTANTALV 177
Query: 208 KLGDGRVVCLTETQKGSI--VIDPDTLDTLRKFEYSDSLGGLIHS--AHPIV--TDNEFL 261
G+++ L E K + V++ L TL +Y L HS AHP V E
Sbjct: 178 -YHHGKLLALQEADKPYVIKVLEDGDLQTLGIIDYDKRL---THSFTAHPKVDPVTGEMF 233
Query: 262 TLLPDLVRPGYLVVRMEPGTNERKVIGRVDCRGGP------SPGWVHSFPATDHYVIVPE 315
T P YL R VI + P P +H F T+ Y I +
Sbjct: 234 TFGYSHT-PPYLTYR---------VISKDGIMHDPVPITISEPIMMHDFAITETYAIFMD 283
Query: 316 MPLRYCAQNLLKAEPTPLYKFQWHPESKAFMHVMCKTSGK--IVASVEVPLFITFHFINA 373
+P+ + + ++K E +Y F P KA V+ + + ++ E+P FH NA
Sbjct: 284 LPMHFRPKEMVK-EKKMIYSFD--PTKKARFGVLPRYAKDELMIRWFELPNCFIFHNANA 340
Query: 374 YEEEDEDGRVTAVIADCCEHNSNTDILERLRLQNLRSFNGQDVLPDAKVGRFRIPLDGSP 433
+EEEDE V+ C N + D++ + L +F + RF + +
Sbjct: 341 WEEEDE-----VVLITCRLENPDLDMVSGKVKEKLENFGNE-----LYEMRFNMKTGSAS 390
Query: 434 NGTLEPALDPNEHGKGMDMCSINPNYLGKKYRYAYACGANRPCNFPNTLTKLDLELK--- 490
L + +D IN Y GKK RY Y + + K DL +
Sbjct: 391 QKKLSAS--------AVDFPRINECYTGKKQRYVYGTILDSIAKVTGII-KFDLHAEAET 441
Query: 491 ---------KAKTWYD--EGAVPSEPFFVARPGATEEDDGVVISIISGKN-GEGYALLLD 538
K YD EG SE +V R A EEDDG +I + +N G+ ++D
Sbjct: 442 GKRMLEVGGNIKGIYDLGEGRYGSEAIYVPRETA-EEDDGYLIFFVHDENTGKSCVTVID 500
Query: 539 GSTF--EEIARAEFPHGIPYGLHGCWVPKK 566
T E +A E PH +PYG H +V ++
Sbjct: 501 AKTMSAEPVAVVELPHRVPYGFHALFVTEE 530
>AT3G14440.1 | Symbols: NCED3, ATNCED3, STO1, SIS7 |
nine-cis-epoxycarotenoid dioxygenase 3 |
chr3:4831678-4833477 REVERSE LENGTH=599
Length = 599
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 200/478 (41%), Gaps = 39/478 (8%)
Query: 98 LAVQGQIPFWLKGTYIRNGPGMWHIGDYNFRHLFDGYATLVKLNFENGRLIAGHRQIESQ 157
L V G++P +KG Y+RNG H H FDG + + FE+G R ++
Sbjct: 139 LPVVGKLPDSIKGVYVRNGANPLH-EPVTGHHFFDGDGMVHAVKFEHGSASYACRFTQTN 197
Query: 158 AYEAAKKNQKICY-REFSEVPK----AESFLAYVGELASLFSGASLTDNANTGVVKLGDG 212
+ ++ + + + E+ A L Y A + A T AN G+V +G
Sbjct: 198 RFVQERQLGRPVFPKAIGELHGHTGIARLMLFYARAAAGIVDPAHGTGVANAGLVYF-NG 256
Query: 213 RVVCLTETQ-KGSIVIDPD-TLDTLRKFEYSDSLGGLIHSAHPIV--TDNEFLTLLPDLV 268
R++ ++E + I P+ L T+ +F++ L + AHP V E L D+V
Sbjct: 257 RLLAMSEDDLPYQVQITPNGDLKTVGRFDFDGQLESTM-IAHPKVDPESGELFALSYDVV 315
Query: 269 RPGYL-VVRMEP-GTNERKVIGRVDCRGGPSPGWVHSFPATDHYVIVPEMPLRYCAQNLL 326
YL R P GT V ++D P +H F T+++V+VP+ + + ++
Sbjct: 316 SKPYLKYFRFSPDGTKSPDVEIQLD-----QPTMMHDFAITENFVVVPDQQVVFKLPEMI 370
Query: 327 KAEPTPLYKFQWHPESKAFMHVMCKTSGKIVASVEVPLFITFHFINAYEEEDEDGRVTAV 386
+ +P+ + + + S I ++ P FH NA+EE + D V V
Sbjct: 371 RGG-SPVVYDKNKVARFGILDKYAEDSSNI-KWIDAPDCFCFHLWNAWEEPETDEVV--V 426
Query: 387 IADCCEHNSNTDILERLRLQNLRSFNGQDVLPDAKVGRFRIPLDGSPNGTLEPALDPNEH 446
I C + D + +NL+S + R+ L + T P + +
Sbjct: 427 IGSCM---TPPDSIFNESDENLKSV----------LSEIRLNLK-TGESTRRPIISNEDQ 472
Query: 447 GKGMDMCSINPNYLGKKYRYAYACGANRPCNFPNTLTKLDLELKKAKT-WYDEGAVPSEP 505
++ +N N LG+K ++AY A P + K+DL + K Y + EP
Sbjct: 473 QVNLEAGMVNRNMLGRKTKFAYLALA-EPWPKVSGFAKVDLTTGEVKKHLYGDNRYGGEP 531
Query: 506 FFVARPGATEEDDGVVISIISGKNGEGYALLLDGSTFEEIARAEFPHGIPYGLHGCWV 563
F+ G E++ ++ + K + +++ + E A + P +PYG HG ++
Sbjct: 532 LFLPGEGGEEDEGYILCFVHDEKTWKSELQIVNAVSLEVEATVKLPSRVPYGFHGTFI 589
>AT1G78390.1 | Symbols: NCED9, ATNCED9 | nine-cis-epoxycarotenoid
dioxygenase 9 | chr1:29490895-29492868 REVERSE
LENGTH=657
Length = 657
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 119/513 (23%), Positives = 198/513 (38%), Gaps = 88/513 (17%)
Query: 89 IPRERWEGELAVQGQIPFWLKGTYIRNGPGMWHIGDYNFRHLFDGYATLVKLNFENGRLI 148
+P + L V G +P ++G Y+RNG H + HLFDG + + F+NG +
Sbjct: 190 VPEKPVVHNLPVTGTVPECIQGVYVRNGANPLH-KPVSGHHLFDGDGMVHAVRFDNGSV- 247
Query: 149 AGHRQIESQAYEAAKKNQKICYREFSE--VPKAESFLAYVGELASLFSGASLT------- 199
S A + N+ + RE PKA +GEL A L
Sbjct: 248 -------SYACRFTETNRLVQERECGRPVFPKA------IGELHGHLGIAKLMLFNTRGL 294
Query: 200 ----------DNANTGVVKLGDGRVVCLTE---------TQKGSIVIDPDTLDTLRKFEY 240
AN G+V +G ++ ++E TQ G L+T ++++
Sbjct: 295 FGLVDPTGGLGVANAGLVYF-NGHLLAMSEDDLPYHVKVTQTGD-------LETSGRYDF 346
Query: 241 SDSLGGLIHSAHPIV--TDNEFLTLLPDLVRPGYLVVRMEPGTNERKVIGRVDCRGGPSP 298
L + AHP + E L D+V YL E+ + P
Sbjct: 347 DGQLKSTM-IAHPKIDPETRELFALSYDVVSKPYLKYFRFTSDGEKSPDVEIPLD---QP 402
Query: 299 GWVHSFPATDHYVIVPEMPLRYCAQNLLKAEPTPLYKFQWHPESKAFMHVMCKTSGKIVA 358
+H F T+++V++P+ + + +++ +Y E K + + K +
Sbjct: 403 TMIHDFAITENFVVIPDQQVVFRLPEMIRGGSPVVYD-----EKKKSRFGILNKNAKDAS 457
Query: 359 SV---EVPLFITFHFINAYEEEDEDGRVTAVIADCCEHNSNTDILERLRLQNLRSFNGQD 415
S+ EVP FH N++EE + D V VI C + FN D
Sbjct: 458 SIQWIEVPDCFCFHLWNSWEEPETDEVV--VIGSCMTPPDSI-------------FNEHD 502
Query: 416 VLPDAKVGRFRIPLDGSPNGTLEPALDPNEHGKGMDMCSINPNYLGKKYRYAYACGANRP 475
+ + R+ L + T P + + ++ +N N LG+K RYAY P
Sbjct: 503 ETLQSVLSEIRLNLK-TGESTRRPVISEQVN---LEAGMVNRNLLGRKTRYAY-LALTEP 557
Query: 476 CNFPNTLTKLDLELKKAKTW-YDEGAVPSEPFFVARPGATEEDDGVVISIISGKNGEGYA 534
+ K+DL + + + Y EG EP F+ G EED G ++ + +
Sbjct: 558 WPKVSGFAKVDLSTGEIRKYIYGEGKYGGEPLFLPS-GDGEEDGGYIMVFVHDEEKVKSE 616
Query: 535 L-LLDGSTFEEIARAEFPHGIPYGLHGCWVPKK 566
L L++ + A P +PYG HG ++ K+
Sbjct: 617 LQLINAVNMKLEATVTLPSRVPYGFHGTFISKE 649
>AT4G18350.1 | Symbols: NCED2, ATNCED2 | nine-cis-epoxycarotenoid
dioxygenase 2 | chr4:10142672-10144423 FORWARD
LENGTH=583
Length = 583
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 208/509 (40%), Gaps = 75/509 (14%)
Query: 86 WTSIPRERWEGELAVQGQIPFWLKGTYIRNG------PGMWHIGDYNFRHLFDGYATLVK 139
++ +P L V+G IP + G YIRNG P H HLFDG +
Sbjct: 110 YSPVPESSVRRNLTVEGTIPDCIDGVYIRNGANPMFEPTAGH-------HLFDGDGMVHA 162
Query: 140 LNFENGRLIAGHRQIESQAYEAAKKNQKICY-REFSEVPK----AESFLAYVGELASLFS 194
+ NG R +++ K+ + + + E+ A L Y L L +
Sbjct: 163 VKITNGSASYACRFTKTERLVQEKRLGRPVFPKAIGELHGHSGIARLMLFYARGLCGLIN 222
Query: 195 GASLTDNANTGVVKLGDGRVVCLTE---------TQKGSIVIDPDTLDTLRKFEYSDSLG 245
+ AN G+V + R++ ++E TQ G L T+ ++++ L
Sbjct: 223 NQNGVGVANAGLVYF-NNRLLAMSEDDLPYQLKITQTGD-------LQTVGRYDFDGQLK 274
Query: 246 GLIHSAHPIV--TDNEFLTLLPDLVRPGYL-VVRMEP-GTNERKVIGRVDCRGGPSPGWV 301
+ AHP + E L D+V+ YL R P G ++ ++ +P +
Sbjct: 275 SAM-IAHPKLDPVTKELHALSYDVVKKPYLKYFRFSPDGVKSPELEIPLE-----TPTMI 328
Query: 302 HSFPATDHYVIVPEMPLRYCAQNLLKAEPTPLYKFQWHPESKAFMHVMCK--TSGKIVAS 359
H F T+++V++P+ + + ++ + +P+ + E + + +M K T +
Sbjct: 329 HDFAITENFVVIPDQQVVFKLGEMISGK-SPVV---FDGEKVSRLGIMPKDATEASQIIW 384
Query: 360 VEVPLFITFHFINAYEEEDEDGRVTAVIADCCEHNSNTDILERLRLQNLRSFNGQDVLPD 419
V P FH NA+E + + V VI C S D + R ++LRS
Sbjct: 385 VNSPETFCFHLWNAWESPETEEIV--VIGSCM---SPADSIFNERDESLRSV-------- 431
Query: 420 AKVGRFRIPLDGSPNGTLEPALDPNEHGKGMDMCSINPNYLGKKYRYAYACGANRPCNFP 479
+ RI L T +L NE +++ +N N LG+K R+A+ A P
Sbjct: 432 --LSEIRINL--RTRKTTRRSLLVNED-VNLEIGMVNRNRLGRKTRFAFLAIA-YPWPKV 485
Query: 480 NTLTKLDLELKKAKTW-YDEGAVPSEPFFV---ARPGATEEDDGVVISIISGKNGEGYAL 535
+ K+DL + K + Y EPFF+ + G EDDG + + + + L
Sbjct: 486 SGFAKVDLCTGEMKKYIYGGEKYGGEPFFLPGNSGNGEENEDDGYIFCHVHDEETKTSEL 545
Query: 536 -LLDGSTFEEIARAEFPHGIPYGLHGCWV 563
+++ + A + P +PYG HG +V
Sbjct: 546 QIINAVNLKLEATIKLPSRVPYGFHGTFV 574