Miyakogusa Predicted Gene
- Lj1g3v2068690.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2068690.1 Non Chatacterized Hit- tr|H2PDW0|H2PDW0_PONAB
Uncharacterized protein OS=Pongo abelii GN=HERC5 PE=4
,33.98,1e-18,RCC1/BLIP-II,Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II;
RCC1,Regulato,CUFF.28396.1
(470 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G11580.1 | Symbols: | Regulator of chromosome condensation (... 483 e-136
AT5G63860.1 | Symbols: UVR8 | Regulator of chromosome condensati... 118 8e-27
AT5G12350.1 | Symbols: | Regulator of chromosome condensation (... 87 3e-17
AT5G19420.2 | Symbols: | Regulator of chromosome condensation (... 87 4e-17
AT5G19420.1 | Symbols: | Regulator of chromosome condensation (... 86 4e-17
AT1G69710.1 | Symbols: | Regulator of chromosome condensation (... 86 4e-17
AT4G14368.1 | Symbols: | Regulator of chromosome condensation (... 86 6e-17
AT3G02300.1 | Symbols: | Regulator of chromosome condensation (... 84 2e-16
AT5G16040.1 | Symbols: | Regulator of chromosome condensation (... 84 3e-16
AT3G23270.1 | Symbols: | Regulator of chromosome condensation (... 83 3e-16
AT1G65920.1 | Symbols: | Regulator of chromosome condensation (... 81 2e-15
AT3G47660.1 | Symbols: | Regulator of chromosome condensation (... 80 3e-15
AT3G02510.1 | Symbols: | Regulator of chromosome condensation (... 80 4e-15
AT3G55580.1 | Symbols: | Regulator of chromosome condensation (... 77 3e-14
AT3G53830.1 | Symbols: | Regulator of chromosome condensation (... 76 6e-14
AT5G42140.1 | Symbols: | Regulator of chromosome condensation (... 74 3e-13
AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensat... 72 6e-13
AT1G27060.1 | Symbols: | Regulator of chromosome condensation (... 69 8e-12
AT5G08710.1 | Symbols: | Regulator of chromosome condensation (... 69 1e-11
AT3G26100.2 | Symbols: | Regulator of chromosome condensation (... 67 3e-11
AT3G26100.1 | Symbols: | Regulator of chromosome condensation (... 66 5e-11
AT5G48330.2 | Symbols: | Regulator of chromosome condensation (... 65 7e-11
AT5G48330.1 | Symbols: | Regulator of chromosome condensation (... 65 7e-11
AT5G60870.1 | Symbols: | Regulator of chromosome condensation (... 64 3e-10
AT5G60870.3 | Symbols: | Regulator of chromosome condensation (... 64 3e-10
AT1G19880.1 | Symbols: | Regulator of chromosome condensation (... 63 4e-10
AT3G15430.2 | Symbols: | Regulator of chromosome condensation (... 61 2e-09
AT3G15430.1 | Symbols: | Regulator of chromosome condensation (... 61 2e-09
AT3G02510.2 | Symbols: | Regulator of chromosome condensation (... 60 4e-09
AT5G60870.2 | Symbols: | Regulator of chromosome condensation (... 59 1e-08
AT3G03790.2 | Symbols: | ankyrin repeat family protein / regula... 58 1e-08
AT3G03790.1 | Symbols: | ankyrin repeat family protein / regula... 58 1e-08
AT3G03790.3 | Symbols: | ankyrin repeat family protein / regula... 58 2e-08
>AT5G11580.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:3718913-3721125 FORWARD
LENGTH=553
Length = 553
Score = 483 bits (1242), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/471 (53%), Positives = 329/471 (69%), Gaps = 28/471 (5%)
Query: 3 GQLGNNGEDSNEEKYTEGDYSLVPCLLNKFIGLHPSDSSTSVSEGEGKESLRICAVKAGG 62
GQLG +GE+S L PCL+ S SS + S E L++C VKAG
Sbjct: 103 GQLGFDGENS-----------LAPCLIKNLFERETSSSSLNDSGREVGSDLKVCTVKAGS 151
Query: 63 MMSLAIDNRGTLWMWGNCPQESKEG--ALSFETSFIPAPVWDFHGRVVVKVSCGNEHVVA 120
MMSLAIDN G LWMWGN P + E LSF + IP P+ DFHGR V+KV+CG+EHVVA
Sbjct: 152 MMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVA 211
Query: 121 LVSATESY--NGEDL-VCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYELACG 177
LV + + N D+ V YSWG+N+HGQLG+GD ESR P+ V+TF+++S +Y++ACG
Sbjct: 212 LVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACG 271
Query: 178 AFHTALLT-RKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVD 236
A HTALLT RK+ P SICWTFG G+NGQLGH + +S+ LP PV +LPE+ +LV VD
Sbjct: 272 AHHTALLTYRKETP--KGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVD 329
Query: 237 CGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDK 296
CGLFHTSVVSS G VWSWGM++GLGLCPDV+ E ++GD PR IS +F DP +
Sbjct: 330 CGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISG--GSSRFRDPVQ 387
Query: 297 VVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLVLWPPMLDDSEEKEPDAK 356
V CGAAHTV+V GYK+W+WGRGR+GVLG G DC++PTLV WP L +E+ P
Sbjct: 388 VSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLVFWPNELKPEKEEVP--- 444
Query: 357 SETDEKLSSALNELNLLQTKLSIMEKYAGILHGSVFGKPF-DEKDIPVSLQSSGSFDIGK 415
D+ S++ E+ L++KL +ME+YA ILHGS+FGKPF +E+DIP SL+ SG FD+GK
Sbjct: 445 ---DDGKSASTEEIKRLESKLMVMERYASILHGSIFGKPFNEEEDIPYSLRVSGYFDMGK 501
Query: 416 EWDNMLEAADNRKLARLEMFYRDMLAGVKDKLMKRKIKDMIKECLQSSDVK 466
EW MLE+AD +L RL+ FY DM+ VKDK+++R+I++++K+CLQSS K
Sbjct: 502 EWGEMLESADKSQLMRLQAFYEDMIGRVKDKVLQRRIQEIMKDCLQSSAPK 552
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 101/269 (37%), Gaps = 65/269 (24%)
Query: 106 RVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFD- 164
R ++ ++ G H +AL D YSWG G+LG G L P +V+ +
Sbjct: 16 RKIISLAAGEAHTIALTG--------DGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQ 67
Query: 165 -EESPWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHG----------- 212
E I +A GA+H+ ++ DD S W +G GQLG
Sbjct: 68 AEGDRIRIVGVAAGAYHSLAVS-----DDGS---VWCWGYNIYGQLGFDGENSLAPCLIK 119
Query: 213 -----TTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVS 267
T S+ L E+ ++ + V G + + + G +W WG +V
Sbjct: 120 NLFERETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWG---------NVP 170
Query: 268 RAESDSGDALNPRLISCEPHQPKFPDPD-------KVVCGAAHTVVVGQEG-------YK 313
+S+ +PRL P FP D KV CG H V + G Y
Sbjct: 171 PQDSEP----DPRLSFTSIPIP-FPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYD 225
Query: 314 V---WAWGRGRSGVLGNGEGVDCHIPTLV 339
V ++WG G LG G+G P V
Sbjct: 226 VSVLYSWGNNHHGQLGLGDGESRARPQTV 254
>AT5G63860.1 | Symbols: UVR8 | Regulator of chromosome condensation
(RCC1) family protein | chr5:25554821-25558587 REVERSE
LENGTH=440
Length = 440
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 129/290 (44%), Gaps = 38/290 (13%)
Query: 53 LRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFETSFIPAPVWDFHGRVVVKVS 112
+RI + G LA+ G + WG Q + G E S +P + F G + V+
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGR-NQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVA 178
Query: 113 CGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIY 172
G EH A+ ED Y WG +G LG+GDR RL PE V + E +
Sbjct: 179 AGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK---MS 227
Query: 173 ELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHL 232
+ACG HT ++ +T+G GQLGHG + L+P +E N +
Sbjct: 228 MVACGWRHTISVSYS--------GALYTYGWSKYGQLGHGDLEDHLIPHK-LEALSNSFI 278
Query: 233 VCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFP 292
+ G HT ++S G ++ WG K G + L C P Q +FP
Sbjct: 279 SQISGGWRHTMALTSDGKLYGWGWNK-FGQV------------GVGNNLDQCSPVQVRFP 325
Query: 293 DPDKVV---CGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
D KVV CG HT+ V E V+AWGRG +G LG GE VD + P ++
Sbjct: 326 DDQKVVQVSCGWRHTLAV-TERNNVFAWGRGTNGQLGIGESVDRNFPKII 374
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 110/237 (46%), Gaps = 36/237 (15%)
Query: 106 RVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDE 165
R V+ +S G H VAL+S D+VC SWG GQLG GD E R P + D
Sbjct: 15 RKVLIISAGASHSVALLSG-------DIVC-SWGRGEDGQLGHGDAEDRPSPTQLSALDG 66
Query: 166 ESPWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIE 225
I + CGA HT ++ S +++G GD G+LGHG + P P+
Sbjct: 67 HQ---IVSVTCGADHTVAYSQ-------SGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKA 116
Query: 226 LPENVHLVCVDCGLFHTSVVSSAGDVWSWGMQKG--LGLCPDVSRAESDSGDALNPRLIS 283
L + + + CG H V+ G+V SWG + LGL D+ D+L P+ I
Sbjct: 117 L-HGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL--------GDTEDSLVPQKIQ 167
Query: 284 C-EPHQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
E + K V GA HT V ++G ++ WG GR G LG G+ D +P V
Sbjct: 168 AFEGIRIKM-----VAAGAEHTAAVTEDG-DLYGWGWGRYGNLGLGDRTDRLVPERV 218
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 23/241 (9%)
Query: 30 NKFIGLHPSDSSTSVSEGEGKESLRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGAL 89
N +GL ++ S + + E +RI V AG + A+ G L+ WG + G
Sbjct: 149 NGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWG-WGRYGNLGLG 207
Query: 90 SFETSFIPAPVWDFHGRVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVG 149
+P V G + V+CG H +++ SY+G Y++G + +GQLG G
Sbjct: 208 DRTDRLVPERVTSTGGEKMSMVACGWRHTISV-----SYSG---ALYTYGWSKYGQLGHG 259
Query: 150 DRESRLHPEVVKTFDEESPWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQL 209
D E L P ++ I +++ G HT LT S+ + +G GQ+
Sbjct: 260 DLEDHLIPHKLEALSNS---FISQISGGWRHTMALT--------SDGKLYGWGWNKFGQV 308
Query: 210 GHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVWSWGMQKG--LGLCPDVS 267
G G P V P++ +V V CG HT V+ +V++WG LG+ V
Sbjct: 309 GVGNNLDQCSPVQV-RFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVD 367
Query: 268 R 268
R
Sbjct: 368 R 368
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 82/174 (47%), Gaps = 23/174 (13%)
Query: 168 PWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELP 227
P + ++ GA H+ L S I ++GRG++GQLGHG + PT + L
Sbjct: 14 PRKVLIISAGASHSVALL--------SGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSAL- 64
Query: 228 ENVHLVCVDCGLFHTSVVSSAG-DVWSWGMQKGLGLCPDVSR-AESDSGDALNPRLISCE 285
+ +V V CG HT S +G +V+SWG D R +S D P I
Sbjct: 65 DGHQIVSVTCGADHTVAYSQSGMEVYSWGW-------GDFGRLGHGNSSDLFTPLPIKA- 116
Query: 286 PHQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
H + ++ CG +H + V EG +V +WGR ++G LG G+ D +P +
Sbjct: 117 LHGIRIK---QIACGDSHCLAVTMEG-EVQSWGRNQNGQLGLGDTEDSLVPQKI 166
>AT5G12350.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:3995789-4000545 FORWARD LENGTH=1075
Length = 1075
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 109/243 (44%), Gaps = 40/243 (16%)
Query: 108 VVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEES 167
V ++CG +H V + ES+ SWG + G+LG G + P+++ + +
Sbjct: 310 VQNIACGGQHAVLVTKQGESF--------SWGEESEGRLGHGVDSNIQQPKLIDALNTTN 361
Query: 168 PWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELP 227
I +ACG FH+ +T + +T+G+GD G LGHG S +P V L
Sbjct: 362 ---IELVACGEFHSCAVTLSGD--------LYTWGKGDFGVLGHGNEVSHWVPKRVNFLL 410
Query: 228 ENVHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPH 287
E +H+ + CG +HT+VV+SAG ++++G G+ D PR E
Sbjct: 411 EGIHVSSIACGPYHTAVVTSAGQLFTFG-DGTFGVL-----GHGDKKSVFIPR----EVD 460
Query: 288 QPKFPDPDKVVCGAAHT-----VVVGQEGY------KVWAWGRGRSGVLGNGEGVDCHIP 336
K + CG HT V+VG K++ WG G G LG+G +P
Sbjct: 461 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP 520
Query: 337 TLV 339
T V
Sbjct: 521 TCV 523
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 129/290 (44%), Gaps = 35/290 (12%)
Query: 58 VKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSF---ETSFIPAPV-WDFHGRVVVKVSC 113
V G S A+ G L+ WG + G L + ++P V + G V ++C
Sbjct: 365 VACGEFHSCAVTLSGDLYTWG----KGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIAC 420
Query: 114 GNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYE 173
G H + SA + +++G G LG GD++S P V D
Sbjct: 421 GPYHTAVVTSAGQ--------LFTFGDGTFGVLGHGDKKSVFIPREV---DSLKGLRTVR 469
Query: 174 LACGAFHTA----LLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPEN 229
ACG +HTA ++ + + S +T+G GD G+LGHG + L+PT V L E
Sbjct: 470 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVE- 528
Query: 230 VHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQP 289
+ V CG T ++++G V++ G P + + D P + + H+
Sbjct: 529 PNFCQVACGHSLTVALTTSGHVYTMG-------SPVYGQLGNSHADGKTPNRVEGKLHKS 581
Query: 290 KFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
+++ CGA H V+ +V+ WG+G +G LG+G+ D + PTLV
Sbjct: 582 FV---EEIACGAYHVAVLTSR-TEVYTWGKGSNGRLGHGDVDDRNSPTLV 627
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 31/193 (16%)
Query: 72 GTLWMWGNCPQESKEGALSFETSFIPAPVWDFHGRVVVKVSCGNEHVVALVSATESYNGE 131
G L+ WG+ + + G + E +P V +V+CG+ VAL ++
Sbjct: 496 GKLFTWGDG-DKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGH----- 549
Query: 132 DLVCYSWGHNNHGQLGV----GDRESRLHPEVVKTFDEESPWAIYELACGAFHTALLTRK 187
Y+ G +GQLG G +R+ ++ K+F EE +ACGA+H A+LT
Sbjct: 550 ---VYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEE-------IACGAYHVAVLT-- 597
Query: 188 KNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSS 247
S + +T+G+G NG+LGHG PT ++E ++ + + CG T+ V
Sbjct: 598 ------SRTEVYTWGKGSNGRLGHGDVDDRNSPT-LVESLKDKQVKSIACGTNFTAAVCI 650
Query: 248 AGDVWSWGMQKGL 260
W+ GM + +
Sbjct: 651 --HRWASGMDQSM 661
>AT5G19420.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552981 REVERSE LENGTH=1139
Length = 1139
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 110/243 (45%), Gaps = 40/243 (16%)
Query: 108 VVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEES 167
V ++CG +H V + ES+ SWG + G+LG G + HP+++ + +
Sbjct: 348 VQNIACGGQHAVLVTKQGESF--------SWGEESEGRLGHGVDSNVQHPKLIDALNTTN 399
Query: 168 PWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELP 227
I +ACG +H+ +T + +T+G+GD G LGHG S +P V L
Sbjct: 400 ---IELVACGEYHSCAVTLSGD--------LYTWGKGDFGILGHGNEVSHWVPKRVNFLM 448
Query: 228 ENVHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPH 287
E +H+ + CG +HT+VV+SAG ++++G G+ D PR E
Sbjct: 449 EGIHVSSIACGPYHTAVVTSAGQLFTFG-DGTFGVL-----GHGDRKSVFIPR----EVD 498
Query: 288 QPKFPDPDKVVCGAAHT-----VVVGQEGY------KVWAWGRGRSGVLGNGEGVDCHIP 336
K + CG HT V+VG K++ WG G LG+G+ +P
Sbjct: 499 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVP 558
Query: 337 TLV 339
T V
Sbjct: 559 TCV 561
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 35/290 (12%)
Query: 58 VKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSF---ETSFIPAPV-WDFHGRVVVKVSC 113
V G S A+ G L+ WG + G L + ++P V + G V ++C
Sbjct: 403 VACGEYHSCAVTLSGDLYTWG----KGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIAC 458
Query: 114 GNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYE 173
G H + SA + +++G G LG GDR+S P V D
Sbjct: 459 GPYHTAVVTSAGQ--------LFTFGDGTFGVLGHGDRKSVFIPREV---DSLKGLRTVR 507
Query: 174 LACGAFHTA----LLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPEN 229
ACG +HTA ++ + + S +T+G GD +LGHG + L+PT V L E
Sbjct: 508 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVE- 566
Query: 230 VHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQP 289
+ V CG T ++++G V++ G P + + D P + + H+
Sbjct: 567 PNFCQVACGHSLTVALTTSGHVYTMG-------SPVYGQLGNPHADGKVPTRVDGKLHKS 619
Query: 290 KFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
+++ CGA H V+ +V+ WG+G +G LG+G+ D + PTLV
Sbjct: 620 FV---EEIACGAYHVAVLTSR-TEVYTWGKGSNGRLGHGDADDRNSPTLV 665
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 31/193 (16%)
Query: 72 GTLWMWGNCPQESKEGALSFETSFIPAPVWDFHGRVVVKVSCGNEHVVALVSATESYNGE 131
G L+ WG+ +S+ G E +P V +V+CG+ VAL ++
Sbjct: 534 GKLFTWGDG-DKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGH----- 587
Query: 132 DLVCYSWGHNNHGQLGV----GDRESRLHPEVVKTFDEESPWAIYELACGAFHTALLTRK 187
Y+ G +GQLG G +R+ ++ K+F EE +ACGA+H A+LT
Sbjct: 588 ---VYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEE-------IACGAYHVAVLT-- 635
Query: 188 KNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSS 247
S + +T+G+G NG+LGHG PT ++E ++ + + CG T+ V
Sbjct: 636 ------SRTEVYTWGKGSNGRLGHGDADDRNSPT-LVESLKDKQVKSIACGSNFTAAV-- 686
Query: 248 AGDVWSWGMQKGL 260
W+ GM + +
Sbjct: 687 CLHKWASGMDQSM 699
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 55 ICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFETSFIPAPV-WDFHGRVVVKVSC 113
C V G +++A+ G ++ G+ P + G + +P V H V +++C
Sbjct: 569 FCQVACGHSLTVALTTSGHVYTMGS-PVYGQLGNPHADGK-VPTRVDGKLHKSFVEEIAC 626
Query: 114 GNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYE 173
G HV L S TE Y+WG ++G+LG GD + R P +V++ ++ +
Sbjct: 627 GAYHVAVLTSRTE--------VYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQ---VKS 675
Query: 174 LACGAFHTALLTRKKNPDDASESIC 198
+ACG+ TA + K +S+C
Sbjct: 676 IACGSNFTAAVCLHKWASGMDQSMC 700
>AT5G19420.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552866 REVERSE LENGTH=1105
Length = 1105
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 110/243 (45%), Gaps = 40/243 (16%)
Query: 108 VVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEES 167
V ++CG +H V + ES+ SWG + G+LG G + HP+++ + +
Sbjct: 314 VQNIACGGQHAVLVTKQGESF--------SWGEESEGRLGHGVDSNVQHPKLIDALNTTN 365
Query: 168 PWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELP 227
I +ACG +H+ +T + +T+G+GD G LGHG S +P V L
Sbjct: 366 ---IELVACGEYHSCAVTLSGD--------LYTWGKGDFGILGHGNEVSHWVPKRVNFLM 414
Query: 228 ENVHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPH 287
E +H+ + CG +HT+VV+SAG ++++G G+ D PR E
Sbjct: 415 EGIHVSSIACGPYHTAVVTSAGQLFTFG-DGTFGVL-----GHGDRKSVFIPR----EVD 464
Query: 288 QPKFPDPDKVVCGAAHT-----VVVGQEGY------KVWAWGRGRSGVLGNGEGVDCHIP 336
K + CG HT V+VG K++ WG G LG+G+ +P
Sbjct: 465 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVP 524
Query: 337 TLV 339
T V
Sbjct: 525 TCV 527
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 35/290 (12%)
Query: 58 VKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSF---ETSFIPAPV-WDFHGRVVVKVSC 113
V G S A+ G L+ WG + G L + ++P V + G V ++C
Sbjct: 369 VACGEYHSCAVTLSGDLYTWG----KGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIAC 424
Query: 114 GNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYE 173
G H + SA + +++G G LG GDR+S P V D
Sbjct: 425 GPYHTAVVTSAGQ--------LFTFGDGTFGVLGHGDRKSVFIPREV---DSLKGLRTVR 473
Query: 174 LACGAFHTA----LLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPEN 229
ACG +HTA ++ + + S +T+G GD +LGHG + L+PT V L E
Sbjct: 474 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVE- 532
Query: 230 VHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQP 289
+ V CG T ++++G V++ G P + + D P + + H+
Sbjct: 533 PNFCQVACGHSLTVALTTSGHVYTMG-------SPVYGQLGNPHADGKVPTRVDGKLHKS 585
Query: 290 KFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
+++ CGA H V+ +V+ WG+G +G LG+G+ D + PTLV
Sbjct: 586 FV---EEIACGAYHVAVLTSR-TEVYTWGKGSNGRLGHGDADDRNSPTLV 631
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 31/193 (16%)
Query: 72 GTLWMWGNCPQESKEGALSFETSFIPAPVWDFHGRVVVKVSCGNEHVVALVSATESYNGE 131
G L+ WG+ +S+ G E +P V +V+CG+ VAL ++
Sbjct: 500 GKLFTWGDG-DKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGH----- 553
Query: 132 DLVCYSWGHNNHGQLGV----GDRESRLHPEVVKTFDEESPWAIYELACGAFHTALLTRK 187
Y+ G +GQLG G +R+ ++ K+F EE +ACGA+H A+LT
Sbjct: 554 ---VYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEE-------IACGAYHVAVLT-- 601
Query: 188 KNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSS 247
S + +T+G+G NG+LGHG PT ++E ++ + + CG T+ V
Sbjct: 602 ------SRTEVYTWGKGSNGRLGHGDADDRNSPT-LVESLKDKQVKSIACGSNFTAAV-- 652
Query: 248 AGDVWSWGMQKGL 260
W+ GM + +
Sbjct: 653 CLHKWASGMDQSM 665
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 55 ICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFETSFIPAPV-WDFHGRVVVKVSC 113
C V G +++A+ G ++ G+ P + G + +P V H V +++C
Sbjct: 535 FCQVACGHSLTVALTTSGHVYTMGS-PVYGQLGNPHADGK-VPTRVDGKLHKSFVEEIAC 592
Query: 114 GNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYE 173
G HV L S TE Y+WG ++G+LG GD + R P +V++ ++ +
Sbjct: 593 GAYHVAVLTSRTE--------VYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQ---VKS 641
Query: 174 LACGAFHTALLTRKKNPDDASESIC 198
+ACG+ TA + K +S+C
Sbjct: 642 IACGSNFTAAVCLHKWASGMDQSMC 666
>AT1G69710.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:26222325-26226530 FORWARD LENGTH=1041
Length = 1041
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 36/293 (12%)
Query: 57 AVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFETS-FIPAPVW-DFHGRVVVKVSCG 114
++ G + AI G L+ WG+ E+S +IP V D G V V+CG
Sbjct: 356 SLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACG 415
Query: 115 NEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYEL 174
H + S+ + +++G G LG GDR S P V++ + ++
Sbjct: 416 PWHTAVVASSGQ--------LFTFGDGTFGALGHGDRRSTSVPREVESL---IGLIVTKV 464
Query: 175 ACGAFHTALLTRKKNPD-----DASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPEN 229
ACG +HTA + N D+S +T+G G+ GQLGHG + LLP VI L N
Sbjct: 465 ACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISL-TN 523
Query: 230 VHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRA---ESDSGDALNPRLISCEP 286
++ V CG T +S G V++ G L ++ E GD + +
Sbjct: 524 ENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASV----- 578
Query: 287 HQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
+++ CG+ H V+ + +++ WG+G +G LG+G + P +V
Sbjct: 579 --------EEIACGSYHVAVLTSKS-EIYTWGKGLNGQLGHGNVENKREPAVV 622
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 96/246 (39%), Gaps = 71/246 (28%)
Query: 97 PAPVWDFHGRVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQ--LGVGDRESR 154
P + G ++CG+ H A+ + + YSWG H LG G+ S
Sbjct: 343 PKFISSVRGLGFKSLACGDFHTCAITQSGD--------LYSWGDGTHNVDLLGHGNESSC 394
Query: 155 LHPEVVKTFDEESPWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTT 214
P+ V T D + + + ++ACG +HTA++ AS +TFG G G LGHG
Sbjct: 395 WIPKRV-TGDLQGLY-VSDVACGPWHTAVV--------ASSGQLFTFGDGTFGALGHGDR 444
Query: 215 QSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSG 274
+ST +P V L + + V CG++HT+ V + + + S AE DS
Sbjct: 445 RSTSVPREVESLI-GLIVTKVACGVWHTAAV--------------VEVTNEASEAEVDSS 489
Query: 275 DALNPRLISCEPHQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCH 334
+V+ WG G G LG+G+
Sbjct: 490 RG------------------------------------QVFTWGDGEKGQLGHGDNDTKL 513
Query: 335 IPTLVL 340
+P V+
Sbjct: 514 LPECVI 519
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 12/144 (8%)
Query: 55 ICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFETSFIPAPVWDFHGRVVVKVSCG 114
IC V G ++++ +RG ++ G+ + G + + +F D V +++CG
Sbjct: 526 ICQVACGHSLTVSRTSRGHVYTMGSTAY-GQLGNPTAKGNFPERVEGDIVEASVEEIACG 584
Query: 115 NEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYEL 174
+ HV L S +E Y+WG +GQLG G+ E++ P VV E+ AI
Sbjct: 585 SYHVAVLTSKSE--------IYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAI--- 633
Query: 175 ACGAFHTALLTRKKNPDDASESIC 198
CG+ TA++ K + S+C
Sbjct: 634 TCGSNFTAVICVHKWVPGSEHSLC 657
>AT4G14368.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr4:8274279-8278810 REVERSE
LENGTH=1106
Length = 1106
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 132/288 (45%), Gaps = 31/288 (10%)
Query: 58 VKAGGMMSLAIDNRGTLWMWGNCPQE-SKEGALSFETSFIPAPVWD-FHGRVVVKVSCGN 115
V G + A+ G L+ WG+ G S + +IP V G V+ V+CG
Sbjct: 327 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGT 386
Query: 116 EHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYELA 175
H SA + NG+ +++G G LG GDRES +P+ VK S ++A
Sbjct: 387 WH-----SALATANGK---LFTFGDGAFGVLGHGDRESVSYPKEVKML---SGLKTLKVA 435
Query: 176 CGAFHTALLTRKKNPDDASESI--CWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLV 233
CG +HT + N S S +T+G GD +LGHG ++ LLPT V L + +
Sbjct: 436 CGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLID-YNFN 494
Query: 234 CVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPD 293
+ CG T ++++G V++ G L S + D P L+ Q +
Sbjct: 495 QIACGHTFTVALTTSGHVFTMGGTSHGQL-------GSSNSDGKLPCLV-----QDRLVG 542
Query: 294 P--DKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
+++ CG H V+ +V+ WG+G +G LG+G+ D PTLV
Sbjct: 543 EFVEEISCGDHHVAVLTSRS-EVFTWGKGSNGRLGHGDKDDRKTPTLV 589
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 38/252 (15%)
Query: 74 LWMWGNCPQESKEGALSFETSFIPAPVWDFHGRVVVKVSCGNEHVVALVSATESYNGEDL 133
L+ WG+ +++ G + ET +P V +++CG+ VAL ++
Sbjct: 460 LFTWGD-GDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGH------- 511
Query: 134 VCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYELACGAFHTALLTRKKNPDDA 193
++ G +HGQLG + + +L P +V+ D + E++CG H A+LT
Sbjct: 512 -VFTMGGTSHGQLGSSNSDGKL-PCLVQ--DRLVGEFVEEISCGDHHVAVLT-------- 559
Query: 194 SESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVWS 253
S S +T+G+G NG+LGHG PT V L E H+ + CG TS + +
Sbjct: 560 SRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRER-HVKSISCGSNFTSSIC----IHK 614
Query: 254 WGMQKGLGLCPDVSRA---ESDSGDALNPRLISCEPHQPK-------FPDPDK--VVCGA 301
W +C +A + N L+ C K P P K VC A
Sbjct: 615 WVSGADQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDA 674
Query: 302 AHT-VVVGQEGY 312
+T + G+ GY
Sbjct: 675 CYTKLKAGESGY 686
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 68 IDNRGTLWMWGNCPQE--SKEGALSFETS----FIPAP-----VWDFHGRVVVKVSCGNE 116
I++ G +++WG + S +G ++ T IP P V D H +++CG
Sbjct: 226 IESLGDVYVWGEVWSDGISPDGVVNSTTVKIDVLIPKPLESNVVLDVH-----QIACGVR 280
Query: 117 HVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYELAC 176
H+ ALV+ GE ++W G+LG G + P++V+ + I +AC
Sbjct: 281 HI-ALVT----RQGE---VFTWEEEAGGRLGHGIQVDVCRPKLVEFL---ALTNIDFVAC 329
Query: 177 GAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVD 236
G +HT ++ + + W G + G LGHG+ S +P V E + ++ V
Sbjct: 330 GEYHTCAVS------TSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVA 383
Query: 237 CGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDK 296
CG +H+++ ++ G ++++G G+ D P+ + K
Sbjct: 384 CGTWHSALATANGKLFTFG-DGAFGVL-----GHGDRESVSYPKEVKMLSGLKTL----K 433
Query: 297 VVCGAAHTV----VVGQEG-----YKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
V CG HTV V+ Q G K++ WG G LG+G +PT V
Sbjct: 434 VACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCV 485
>AT3G02300.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:461551-463929 FORWARD
LENGTH=471
Length = 471
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 131/302 (43%), Gaps = 45/302 (14%)
Query: 58 VKAGGMMSLAI----DNRGTL-----WMWGNCPQESKEGALSFETSFIPAPVWDFHGRVV 108
V G + AI +N GTL W+WG Q + PA +
Sbjct: 118 VSCGAFCTAAIAEPRENDGTLSTSRLWVWG---QNQGSNLPRLFSGAFPATT------AI 168
Query: 109 VKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDR-ESRLHPEVVKT---FD 164
+VSCG HVVAL E+ + +WG+N GQLG G E P V+ F
Sbjct: 169 RQVSCGTAHVVAL--------SEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFL 220
Query: 165 EESP--WAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQS---TLL 219
+E+P I +L+CG +HTA L+ DA E +T+G G GQLGH + QS L+
Sbjct: 221 DEAPELVKIMQLSCGEYHTAALS------DAGE--VYTWGLGSMGQLGHVSLQSGDKELI 272
Query: 220 PTPVIELPENVHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNP 279
P V+ L + V + V CG HT +S G +++WG + L S +
Sbjct: 273 PRRVVGL-DGVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSE 331
Query: 280 RLISCEPHQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
L+ P D V CG +HT+V +EG ++ WG G N + P+ V
Sbjct: 332 MLLRNVPVLVIPTDVRLVACGHSHTLVYMREG-RICGWGYNSYGQAANEKSSYAWYPSPV 390
Query: 340 LW 341
W
Sbjct: 391 DW 392
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 107/262 (40%), Gaps = 72/262 (27%)
Query: 109 VKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESP 168
+ +SCG EH A+ S D ++WG N +GQLG G R HP+ VK E
Sbjct: 64 LDISCGREHTAAVAS--------DGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSE-- 113
Query: 169 WAIYELACGAFHTALLTR-KKNPDDASESICWTFGRG----------------------- 204
+ ++CGAF TA + ++N S S W +G+
Sbjct: 114 -FVKFVSCGAFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVS 172
Query: 205 ---------------------DNGQLGHGTTQSTLLPTPVI--------ELPENVHLVCV 235
+ GQLG G T L VI E PE V ++ +
Sbjct: 173 CGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQL 232
Query: 236 DCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPD 295
CG +HT+ +S AG+V++WG+ +G VS D + + R++ + K
Sbjct: 233 SCGEYHTAALSDAGEVYTWGLGS-MGQLGHVSLQSGDK-ELIPRRVVGLDGVSMK----- 285
Query: 296 KVVCGAAHTVVVGQEGYKVWAW 317
+V CG HT + EG ++AW
Sbjct: 286 EVACGGVHTCALSLEG-ALYAW 306
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 108/260 (41%), Gaps = 52/260 (20%)
Query: 136 YSWGHNNHGQLGVGDRE------SRLHPEVVKT-FDEESPWAIYELACGAFHTALLTRKK 188
Y WG+N GQ G ++E +L PE+ S W +++CG HTA +
Sbjct: 23 YVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRW--LDISCGREHTAAV---- 76
Query: 189 NPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVS-- 246
AS+ + +G + GQLG GT P V +L ++ + V CG F T+ ++
Sbjct: 77 ----ASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQL-QSEFVKFVSCGAFCTAAIAEP 131
Query: 247 -------SAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKVVC 299
S +W WG +G L PRL S P +V C
Sbjct: 132 RENDGTLSTSRLWVWGQNQGSNL----------------PRLFS--GAFPATTAIRQVSC 173
Query: 300 GAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDC---HIPTLV-LWPPMLDDSEEKEPDA 355
G AH V + +EG + AWG G L G GV C P ++ + LD++ E
Sbjct: 174 GTAHVVALSEEGL-LQAWGYNEQGQL--GRGVTCEGLQAPRVINAYAKFLDEAPELVKIM 230
Query: 356 KSETDEKLSSALNELNLLQT 375
+ E ++AL++ + T
Sbjct: 231 QLSCGEYHTAALSDAGEVYT 250
>AT5G16040.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:5240860-5243308 REVERSE
LENGTH=396
Length = 396
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 95/197 (48%), Gaps = 29/197 (14%)
Query: 48 EGKESLRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFETSFIPAPVWDFHGRV 107
+G E++R+ AV G +LA+ GTLW WGN + + G + P PV
Sbjct: 193 QGLENVRLIAV--GAFHNLALKEDGTLWAWGNN-EYGQLGTGDTQPRSYPIPVQGLDDLT 249
Query: 108 VVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGD--RESRLHPEVVKTFDE 165
+V ++ G H AL + E Y WG HG+LG GD + S++ P+ V
Sbjct: 250 LVDIAAGGWHSTALTNEGE--------VYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAG 301
Query: 166 ESPWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIE 225
E I +++CG H+ LTR + ++FGRGD+G+LG+G +T P +E
Sbjct: 302 ED---IIQVSCGGTHSVALTR--------DGRIFSFGRGDHGRLGYGRKVTTGQP---LE 347
Query: 226 LPENVHLVCVDCGLFHT 242
LP +H+ + HT
Sbjct: 348 LP--IHIPPPEGRFNHT 362
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 118/274 (43%), Gaps = 53/274 (19%)
Query: 51 ESLRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFETSFIPAPVWDFHGRVVVK 110
+ L + V AGG S+ + G +W WG P P D ++ V
Sbjct: 148 QQLTVRQVAAGGTHSVVLTREGYVWTWGQ-----------------PWPPGDIK-QISVP 189
Query: 111 VSCGNEHVVALVSATESYN---GEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEES 167
V V L++ +N ED ++WG+N +GQLG GD + R +P V+ D+ +
Sbjct: 190 VRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLT 249
Query: 168 PWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTT--QSTLLPTPVIE 225
+ ++A G +H+ LT +E + +GRG++G+LG G S +LP V
Sbjct: 250 ---LVDIAAGGWHSTALT--------NEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKV-N 297
Query: 226 LPENVHLVCVDCGLFHTSVVSSAGDVWSWGM--QKGLGLCPDVSRAESDSGDALNPRLIS 283
L ++ V CG H+ ++ G ++S+G LG V+ +G L I
Sbjct: 298 LLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVT-----TGQPLE-LPIH 351
Query: 284 CEPHQPKFPDPDK----------VVCGAAHTVVV 307
P + +F D+ V CG HT+ +
Sbjct: 352 IPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAI 385
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 140/346 (40%), Gaps = 60/346 (17%)
Query: 33 IGLHPSDSSTSVSEGEGKESLRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFE 92
+GL + S + E + +V G SLAI + G L+ WG + + +
Sbjct: 18 LGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETK 77
Query: 93 TSFIPAPVWDFHGRVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLG---VG 149
T P+ V +V+ + G H +A+ + Y+WG N +GQ G
Sbjct: 78 TESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRA--------YAWGGNEYGQCGEEPSK 129
Query: 150 DRESR-LHPEVVKTFDEESPWAIYELACGAFHTALLTRKKN---------PDDASE---- 195
D R + ++V + ++A G H+ +LTR+ P D +
Sbjct: 130 DETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDIKQISVP 189
Query: 196 -------------------------SICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENV 230
W +G + GQLG G TQ P PV L +++
Sbjct: 190 VRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGL-DDL 248
Query: 231 HLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPK 290
LV + G +H++ +++ G+V+ WG G + ++D + P+ ++ +
Sbjct: 249 TLVDIAAGGWHSTALTNEGEVYGWGR----GEHGRLGFGDNDKSSKMLPQKVNLLAGE-- 302
Query: 291 FPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIP 336
D +V CG H+V + ++G +++++GRG G LG G V P
Sbjct: 303 --DIIQVSCGGTHSVALTRDG-RIFSFGRGDHGRLGYGRKVTTGQP 345
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 30/166 (18%)
Query: 48 EGKESLRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSF-----ETSFIPAPVWD 102
+G + L + + AGG S A+ N G ++ WG + G L F + +P V
Sbjct: 243 QGLDDLTLVDIAAGGWHSTALTNEGEVYGWG----RGEHGRLGFGDNDKSSKMLPQKVNL 298
Query: 103 FHGRVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKT 162
G +++VSCG H VAL D +S+G +HG+LG G + + P +
Sbjct: 299 LAGEDIIQVSCGGTHSVALT--------RDGRIFSFGRGDHGRLGYGRKVTTGQPLELPI 350
Query: 163 F-----------DEE--SPWAIYELACGAFHTALLTRKKNPDDASE 195
DEE W +ACG HT + K + +E
Sbjct: 351 HIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVEWKYDQEETE 396
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 15/183 (8%)
Query: 137 SWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYELACGAFHTALLTRKKNPDDASES 196
+WG GQLG+G E + E+ D P+ + + G+ ++ + DD
Sbjct: 9 AWGSGEDGQLGLGTDEEK---ELASVVDALEPFNVRSVVGGSRNSLAIC-----DDGK-- 58
Query: 197 ICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVWSWGM 256
+T+G G LGH T +++ NV +V G +H V G ++WG
Sbjct: 59 -LFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGG 117
Query: 257 QKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKVVCGAAHTVVVGQEGYKVWA 316
+ G C + ++ ++G + R I + +V G H+VV+ +EGY VW
Sbjct: 118 NE-YGQCGE-EPSKDETGRPVR-RDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGY-VWT 173
Query: 317 WGR 319
WG+
Sbjct: 174 WGQ 176
>AT3G23270.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr3:8316436-8320337 FORWARD LENGTH=1045
Length = 1045
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 133/288 (46%), Gaps = 31/288 (10%)
Query: 58 VKAGGMMSLAIDNRGTLWMWGNCPQE-SKEGALSFETSFIPAPV-WDFHGRVVVKVSCGN 115
V G + + G L+ WG+ G S + +IP V G V+ V+CG
Sbjct: 308 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGT 367
Query: 116 EHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYELA 175
H SA + NG+ +++G G LG G+RES +P+ V++ + ++A
Sbjct: 368 WH-----SALATANGK---LFTFGDGAFGVLGHGNRESVSYPKEVQSLNG---LKTVKVA 416
Query: 176 CGAFHTALLTR--KKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPE-NVHL 232
C +HTA + + S +T+G GD +LGHG ++ LLPT V L + N H
Sbjct: 417 CSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHK 476
Query: 233 VCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFP 292
+ CG T ++++G V++ G A G++++ + C
Sbjct: 477 IA--CGHTFTVALTTSGHVFTMG-----------GTAHGQLGNSISDGKLPCLVQDRLVG 523
Query: 293 D-PDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
+ +++ CGA H V+ +V+ WG+G +G LG+G+ D PTLV
Sbjct: 524 EFVEEIACGAHHVAVLTSRS-EVFTWGKGANGRLGHGDTEDKRTPTLV 570
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 126/294 (42%), Gaps = 56/294 (19%)
Query: 68 IDNRGTLWMWGNCPQES--KEGALSFETS----FIPAP-----VWDFHGRVVVKVSCGNE 116
I++ G +++WG E +G S ET P P V D H ++ CG
Sbjct: 207 IESLGDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVH-----QIVCGVR 261
Query: 117 HVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYELAC 176
HV ALV+ GE ++WG G+LG G + P++V+ + I +AC
Sbjct: 262 HV-ALVT----RQGE---VFTWGEEVGGRLGHGIQVDISRPKLVEFLALTN---IDFVAC 310
Query: 177 GAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVD 236
G +HT +++ + + W G + G LGHG+ S +P V E + ++ V
Sbjct: 311 GEYHTCVVS------TSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVA 364
Query: 237 CGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSR------AESDSGDALNPRLISCEPHQPK 290
CG +H+++ ++ G ++++G G+ +R E S + L ++C
Sbjct: 365 CGTWHSALATANGKLFTFG-DGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACS----- 418
Query: 291 FPDPDKVVCGAAHTVVVGQEG-----YKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
+ AA V+GQ K++ WG G LG+G +PT V
Sbjct: 419 ------IWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCV 466
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 25/152 (16%)
Query: 199 WTFGRGDNGQLGHGTTQSTLL-PTPV-IELPENVHLVCVDCGLFHTSVVSSAGDVWSWGM 256
WT G +G + T ++ +L P P+ + +VH + CG+ H ++V+ G+V++WG
Sbjct: 220 WTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIV--CGVRHVALVTRQGEVFTWGE 277
Query: 257 QKG----LGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKVVCGAAHTVVVGQEGY 312
+ G G+ D+SR P+L+ + D V CG HT VV G
Sbjct: 278 EVGGRLGHGIQVDISR----------PKLVEFL----ALTNIDFVACGEYHTCVVSTSG- 322
Query: 313 KVWAWGRG--RSGVLGNGEGVDCHIPTLVLWP 342
+++WG G G+LG+G + IP V P
Sbjct: 323 DLFSWGDGIHNVGLLGHGSDISHWIPKRVSGP 354
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 78/195 (40%), Gaps = 30/195 (15%)
Query: 58 VKAGGMMSLAIDNRGTLWMWGNCPQESKEGAL--SFETSFIPAPVWD-FHGRVVVKVSCG 114
+ G ++A+ G ++ G + G L S +P V D G V +++CG
Sbjct: 477 IACGHTFTVALTTSGHVFTMGG----TAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACG 532
Query: 115 NEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYEL 174
HV L S +E ++WG +G+LG GD E + P +V+ + + L
Sbjct: 533 AHHVAVLTSRSE--------VFTWGKGANGRLGHGDTEDKRTPTLVEALRDRH---VKSL 581
Query: 175 ACGAFHTALLTRKKNPDDASESIC--------WTFGRGDNGQLG----HGTTQSTLLPTP 222
+CG+ T+ + K A +SIC +T R + G H + L
Sbjct: 582 SCGSNFTSSICIHKWVSGADQSICSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAA 641
Query: 223 VIELPENVHLVCVDC 237
+ P H VC C
Sbjct: 642 LAPTPGKPHRVCDAC 656
>AT1G65920.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:24525267-24529204 REVERSE LENGTH=1006
Length = 1006
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 134/300 (44%), Gaps = 37/300 (12%)
Query: 48 EGKESLRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFETSFIPAPVWDFHG-- 105
E E + + +V + A+ G L++WG ++ + F+ + D G
Sbjct: 339 ESLEDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSG----SQFLTRKISDVLGGS 394
Query: 106 RVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDE 165
V+ V+CG H + S+ + +++G G LG G ES P+ V++
Sbjct: 395 LTVLSVACGAWHTAIVTSSGQ--------LFTYGSGTFGVLGHGSLESVTKPKEVESLRR 446
Query: 166 ESPWAIYELACGAFHTALLTRKKNP----DDASESICWTFGRGDNGQLGHGTTQSTLLPT 221
+ ++CG +HTA + N + S +T+G GD G+LGH ++ L+PT
Sbjct: 447 ---MKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPT 503
Query: 222 PVIELPENVHLVCVDCGLFHTSVVSSAGDVWSWG--MQKGLGLCPDVSRAESDSGDALNP 279
V EL ++ + V CG T +S +G V++ G + LG CP RA+ S + +
Sbjct: 504 CVTELIDH-DFIKVSCGWTLTVALSISGTVYTMGSSIHGQLG-CP---RAKDKSVNVVLG 558
Query: 280 RLISCEPHQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
L +F K + +H V V V+ WG+G +G LG G+ D + P LV
Sbjct: 559 NLTR------QFV---KDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLV 609
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 21/168 (12%)
Query: 161 KTFDEESPWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLP 220
K + + + + ++ GA H AL+TR+ E CW G G++G+LG P
Sbjct: 284 KLLESATMFDVQSISLGAKHAALVTRQ------GEVFCW--GNGNSGKLGLKVNIDIDHP 335
Query: 221 TPVIELPENVHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPR 280
V L E+V + V C T V+ +G+++ WG+ G D L
Sbjct: 336 KRVESL-EDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSGSQFLTRKISDVLGGS 394
Query: 281 LISCEPHQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNG 328
L V CGA HT +V G +++ +G G GVLG+G
Sbjct: 395 LTVLS-----------VACGAWHTAIVTSSG-QLFTYGSGTFGVLGHG 430
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 23/175 (13%)
Query: 72 GTLWMWGNCPQESKEGALSFETSFIPAPVWDFHGRVVVKVSCGNEHVVALVSATESYNGE 131
G L+ WG+ + + G + +P V + +KVSCG VAL S +G
Sbjct: 478 GKLFTWGD-GDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVAL-----SISG- 530
Query: 132 DLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYELACGAFHTALLTRKKNPD 191
Y+ G + HGQLG + + V+ + + ++A G+ H A+LT N
Sbjct: 531 --TVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQ---FVKDIASGSHHVAVLTSFGN-- 583
Query: 192 DASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLV-CVDCGLFHTSVV 245
+T+G+G NGQLG G + +PV+ P LV + CGL T+ +
Sbjct: 584 ------VYTWGKGMNGQLGLGDVRDR--NSPVLVEPLGDRLVESIACGLNLTAAI 630
>AT3G47660.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:17571192-17574805 FORWARD
LENGTH=954
Length = 954
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 156/362 (43%), Gaps = 80/362 (22%)
Query: 34 GLHPSDSSTSVSEG-------EGKESLRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKE 86
G+H S SS+S+ + +L ++ G ++ + +G ++ WG E
Sbjct: 273 GMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWG----EESG 328
Query: 87 GALSFET-SFIPAP--VWDFHGRVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNH 143
G L S++P P + +F+G V CG H A+ ++ + Y+WG +H
Sbjct: 329 GRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGD--------LYAWGDGDH 380
Query: 144 --GQLGVGDRESRLHPEVVKTFDEESPWAIYELACGAFHTALLTRKKNPDDASESICWTF 201
G LG+G S P V+ + + ++CG +HTA +T SE +TF
Sbjct: 381 NAGLLGLGSGASHWKP--VRILGQMEGIYVKAISCGPWHTAFVT--------SEGKLFTF 430
Query: 202 GRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVV-------SSAGDVWSW 254
G G G LGHG ST +P V E + CG++H++ V +S+G +++W
Sbjct: 431 GDGTFGALGHGDRISTNIPREV-EALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTW 489
Query: 255 G----MQKGLG-----LCPD-VSRAESDS------GDALNPRL-ISCEPHQPKFPDP--- 294
G + G G L P V+ ++ S G ++ L +S + + DP
Sbjct: 490 GDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSHD 549
Query: 295 -----------------DKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPT 337
+V CG H V+ + +V+ WG+G +G LG+G+ +PT
Sbjct: 550 IVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKA-EVYTWGKGSNGQLGHGDTEYRCMPT 608
Query: 338 LV 339
LV
Sbjct: 609 LV 610
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 98/243 (40%), Gaps = 63/243 (25%)
Query: 51 ESLRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFE---TSFIPAPVWDFHGRV 107
E + + A+ G + + + G L+ +G + GAL ++ IP V +G
Sbjct: 404 EGIYVKAISCGPWHTAFVTSEGKLFTFG----DGTFGALGHGDRISTNIPREVEALNGCR 459
Query: 108 VVKVSCGNEHVVALVSAT-ESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEE 166
+K +CG H A+VS E+ + L ++WG + G+LG GD E RL P V D
Sbjct: 460 TIKAACGVWHSAAVVSVFGEATSSGKL--FTWGDGDDGRLGHGDIECRLIPSCVTELDTT 517
Query: 167 S-----------------------------------PWAI---------YELACGAFHTA 182
S P I E+ACG H A
Sbjct: 518 SFQQVACGQSITVALSMSGQVYAMGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIA 577
Query: 183 LLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHT 242
+L K +T+G+G NGQLGHG T+ +PT V L + + V CG +T
Sbjct: 578 VLNSKAE--------VYTWGKGSNGQLGHGDTEYRCMPTLVKAL-KGKQVRKVVCGSNYT 628
Query: 243 SVV 245
+ +
Sbjct: 629 ATI 631
>AT3G02510.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:522086-524536 REVERSE
LENGTH=393
Length = 393
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 27/185 (14%)
Query: 48 EGKESLRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFETSFIPAPVWDFHGRV 107
+G E++R+ AV G +LA++ G L WGN + + G + + P PV
Sbjct: 193 QGLENVRLIAV--GAFHNLALEEDGRLLAWGNN-EYGQLGTGDTQPTSHPVPVQGLDDLT 249
Query: 108 VVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGD--RESRLHPEVVKTFDE 165
+V ++ G H AL E Y WG HG+LG+GD + S++ P+ V E
Sbjct: 250 LVDIAAGGWHSTALTDKGE--------VYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAE 301
Query: 166 ESPWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIE 225
E I +++CG H+ LTR + ++FGRGD+G+LG+G +T P +E
Sbjct: 302 ED---IIQVSCGGTHSVALTR--------DGRIFSFGRGDHGRLGYGRKVTTGQP---LE 347
Query: 226 LPENV 230
LP +
Sbjct: 348 LPIKI 352
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 53 LRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFETSFIPAPVWDFHGRVVVKVS 112
L + V AGG S+ + G +W WG P P D ++ V V
Sbjct: 150 LTVRQVAAGGTHSVVLTREGHVWTWGQ-----------------PWPPGDIK-QISVPVR 191
Query: 113 CGNEHVVALVSATESYN---GEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPW 169
V L++ +N ED +WG+N +GQLG GD + HP V+ D+ +
Sbjct: 192 VQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLT-- 249
Query: 170 AIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTT--QSTLLPTPVIELP 227
+ ++A G +H+ LT D E W GRG++G+LG G S ++P V L
Sbjct: 250 -LVDIAAGGWHSTALT------DKGEVYGW--GRGEHGRLGLGDNDKSSKMVPQKVNLLA 300
Query: 228 ENVHLVCVDCGLFHTSVVSSAGDVWSWG 255
E ++ V CG H+ ++ G ++S+G
Sbjct: 301 EE-DIIQVSCGGTHSVALTRDGRIFSFG 327
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 151/362 (41%), Gaps = 72/362 (19%)
Query: 48 EGKESLRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFETSFIPAPVWDFHGRV 107
E E + +V +G SLAI + GT++ WG + + +T IP+ V
Sbjct: 33 EALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVK 92
Query: 108 VVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLG---VGDRESR-LHPEVVKTF 163
+ + + G H +A+ + Y+WG N +GQ G + D R + ++V
Sbjct: 93 ITQAAIGGWHCLAVDDQGRA--------YAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPK 144
Query: 164 DEESPWAIYELACGAFHTALLTRKKN---------PDDASE------------------- 195
+ ++A G H+ +LTR+ + P D +
Sbjct: 145 RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVG 204
Query: 196 ----------SICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVV 245
+G + GQLG G TQ T P PV L +++ LV + G +H++ +
Sbjct: 205 AFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGL-DDLTLVDIAAGGWHSTAL 263
Query: 246 SSAGDVWSWGM--QKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKVVCGAAH 303
+ G+V+ WG LGL ++D + P+ ++ + D +V CG H
Sbjct: 264 TDKGEVYGWGRGEHGRLGL------GDNDKSSKMVPQKVNLLAEE----DIIQVSCGGTH 313
Query: 304 TVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPT---LVLWPP-----MLDDSEEKEPDA 355
+V + ++G +++++GRG G LG G V P + + PP D+ EE + A
Sbjct: 314 SVALTRDG-RIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSA 372
Query: 356 KS 357
KS
Sbjct: 373 KS 374
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 30/162 (18%)
Query: 48 EGKESLRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSF-----ETSFIPAPVWD 102
+G + L + + AGG S A+ ++G ++ WG + G L + +P V
Sbjct: 243 QGLDDLTLVDIAAGGWHSTALTDKGEVYGWG----RGEHGRLGLGDNDKSSKMVPQKVNL 298
Query: 103 FHGRVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVK- 161
+++VSCG H VAL D +S+G +HG+LG G + + P +
Sbjct: 299 LAEEDIIQVSCGGTHSVALT--------RDGRIFSFGRGDHGRLGYGRKVTTGQPLELPI 350
Query: 162 -------TFD-----EESPWAIYELACGAFHTALLTRKKNPD 191
+F+ EE W+ +ACG HT + K+ D
Sbjct: 351 KIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAIVEWKSDD 392
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 137 SWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYELACGAFHTALLTRKKNPDDASES 196
+WG GQLG+G E + VV+ + P+++ + G+ ++ + DD +
Sbjct: 9 AWGSGEDGQLGIGTNEEKEWACVVEALE---PYSVRSVVSGSRNSLAIC-----DDGT-- 58
Query: 197 ICWTFGRGDNGQLGHG-TTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVWSWG 255
+T+G G LGH T++ +P+ V L NV + G +H V G ++WG
Sbjct: 59 -MFTWGWNQRGTLGHQPETKTENIPSRVKAL-ANVKITQAAIGGWHCLAVDDQGRAYAWG 116
Query: 256 MQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKVVCGAAHTVVVGQEGYKVW 315
+ G C + + + G + ++ + PK +V G H+VV+ +EG+ VW
Sbjct: 117 GNE-YGQCGE-EPLKDEMGRPVRRDIVIPKRCAPKL-TVRQVAAGGTHSVVLTREGH-VW 172
Query: 316 AWGR 319
WG+
Sbjct: 173 TWGQ 176
>AT3G55580.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:20612766-20615730 FORWARD
LENGTH=488
Length = 488
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 132/317 (41%), Gaps = 79/317 (24%)
Query: 21 DYSLVPCLLNKFIGLHPSDSSTSVSEGEGKESLRICAVKAGGMMSLAIDNRGTLWMWGN- 79
D S +PCL++ L P +RI +V AGG +LA+ + G +W WG
Sbjct: 220 DLSALPCLVS----LAPG--------------VRIVSVAAGGRHTLALSDIGQVWGWGYG 261
Query: 80 ---------------------CPQESKEGALSFETSFIPAPVW--DFHGRVVVKVSCGNE 116
C + S G + + + V G V K++CG
Sbjct: 262 GEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGR 321
Query: 117 HVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYELAC 176
H A+++ T + L+ + WG +GQ G G + L P V + I E+A
Sbjct: 322 HS-AVITDTGA-----LLTFGWGL--YGQCGQGSTDDELSPTCVSSLLGIR---IEEVAA 370
Query: 177 GAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELP--ENVHLVC 234
G +HT + S+ + FG GQLG G Q+ LP ++E P ENV++
Sbjct: 371 GLWHTTCAS--------SDGDVYAFGGNQFGQLGTGCDQAETLPK-LLEAPNLENVNVKT 421
Query: 235 VDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPD- 293
+ CG HT+V++ G V+ WG K + GD ++ P + + D
Sbjct: 422 ISCGARHTAVITDEGRVFCWGWNK---------YGQLGIGDVIDRN----APAEVRIKDC 468
Query: 294 -PDKVVCGAAHTVVVGQ 309
P + CG HT+++GQ
Sbjct: 469 FPKNIACGWWHTLLLGQ 485
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 50/273 (18%)
Query: 90 SFETSFIPAPVWDFHGRVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVG 149
+ + S +P V G +V V+ G H +AL + + WG+ GQLG+G
Sbjct: 218 NIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQ--------VWGWGYGGEGQLGLG 269
Query: 150 DRE---SRLHP--------------------EVVKTFDEESPWAIYELACGAFHTALLTR 186
R S HP VV+ + + ++ACG H+A++T
Sbjct: 270 SRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSY-VKKIACGGRHSAVIT- 327
Query: 187 KKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVS 246
D + TFG G GQ G G+T L PT V L + + V GL+HT+ S
Sbjct: 328 -----DTGALL--TFGWGLYGQCGQGSTDDELSPTCVSSL-LGIRIEEVAAGLWHTTCAS 379
Query: 247 SAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKVVCGAAHTVV 306
S GDV+++G + L +AE+ P+L+ E + + + CGA HT V
Sbjct: 380 SDGDVYAFGGNQFGQLGTGCDQAET------LPKLL--EAPNLENVNVKTISCGARHTAV 431
Query: 307 VGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
+ EG +V+ WG + G LG G+ +D + P V
Sbjct: 432 ITDEG-RVFCWGWNKYGQLGIGDVIDRNAPAEV 463
>AT3G53830.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:19940814-19943592 FORWARD
LENGTH=472
Length = 472
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 113/261 (43%), Gaps = 52/261 (19%)
Query: 105 GRVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLH-PEVVKTF 163
G + V+ G H +AL + + WG+ GQLG+G R + P ++
Sbjct: 213 GVRITSVATGGRHTLALSDLGQ--------IWGWGYGGEGQLGLGSRIKMVSSPHLIPCL 264
Query: 164 D-------------------------EESPWAIYELACGAFHTALLTRKKNPDDASESIC 198
+ E I ++CG H+A +T DA I
Sbjct: 265 ESIGSGKERSFILHQGGTTTTSAQASREPGQYIKAISCGGRHSAAIT------DAGGLI- 317
Query: 199 WTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVWSWGMQK 258
TFG G GQ GHG T L P V E+ ++V + V GL+HT +SS G V+++G +
Sbjct: 318 -TFGWGLYGQCGHGNTNDQLRPMAVSEV-KSVRMESVAAGLWHTICISSDGKVYAFGGNQ 375
Query: 259 GLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWG 318
L AE + PRL+ + + K V CGA H+ V+ ++G ++ WG
Sbjct: 376 FGQLGTGTDHAE------ILPRLLDGQNLEGKH--AKAVSCGARHSAVLAEDG-QLLCWG 426
Query: 319 RGRSGVLGNGEGVDCHIPTLV 339
+ G LG G+ D +IPT V
Sbjct: 427 WNKYGQLGLGDTNDRNIPTQV 447
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 38/231 (16%)
Query: 24 LVPCLLN-------KFIGLHPSDSSTSVSEGEGKESLRICAVKAGGMMSLAIDNRGTL-- 74
L+PCL + FI LH ++T+ ++ + I A+ GG S AI + G L
Sbjct: 260 LIPCLESIGSGKERSFI-LHQGGTTTTSAQASREPGQYIKAISCGGRHSAAITDAGGLIT 318
Query: 75 --W-MWGNCPQESKEGALSFETSFIPAPVWDFHGRVVVKVSCGNEHVVALVSATESYNGE 131
W ++G C + L P V + + V+ G H + + S
Sbjct: 319 FGWGLYGQCGHGNTNDQLR------PMAVSEVKSVRMESVAAGLWHTICISS-------- 364
Query: 132 DLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYELACGAFHTALLTRKKNPD 191
D Y++G N GQLG G + + P ++ + E A ++CGA H+A+L
Sbjct: 365 DGKVYAFGGNQFGQLGTGTDHAEILPRLLDGQNLEGKHA-KAVSCGARHSAVLA------ 417
Query: 192 DASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHT 242
+ + +CW + + GQLG G T +PT V +L + L V CG +HT
Sbjct: 418 EDGQLLCWGWNK--YGQLGLGDTNDRNIPTQV-QL-DGCRLRKVACGWWHT 464
>AT5G42140.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:16837547-16841640 REVERSE LENGTH=1073
Length = 1073
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 127/293 (43%), Gaps = 40/293 (13%)
Query: 58 VKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFETS---FIPAPVWD-FHGRVVVKVSC 113
V G + A+ G ++ WG+ + G L T +IP + G + VSC
Sbjct: 329 VACGEFHTCAVTMTGEIYTWGDGTHNA--GLLGHGTDVSHWIPKRISGPLEGLQIASVSC 386
Query: 114 GNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYE 173
G H AL+++T +++G G LG GD+E+ +P V++ S
Sbjct: 387 GPWHT-ALITSTGQL-------FTFGDGTFGVLGHGDKETVFYPREVESL---SGLRTIA 435
Query: 174 LACGAFHTALLTR---KKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENV 230
+ACG +H A + + S +T+G GD +LGHG + L PT V L ++
Sbjct: 436 VACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHT 495
Query: 231 HLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRL---ISCEPH 287
V CG T ++++G V++ G + G NP + C
Sbjct: 496 -FHRVACGHSLTVGLTTSGKVYTMG--------------STVYGQLGNPNADGKLPCLVE 540
Query: 288 QPKFPD-PDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
D +++ CGA H V+ +V+ WG+G +G LG+G+ D PTLV
Sbjct: 541 DKLTKDCVEEIACGAYHVAVLTSRN-EVFTWGKGANGRLGHGDVEDRKAPTLV 592
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 36/201 (17%)
Query: 69 DNRGTLWMWGN--CPQESKEGA-------LSFETSFIPAP-----VWDFHGRVVVKVSCG 114
D G +++WG C +K GA S IP P V D H ++CG
Sbjct: 226 DALGDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVH-----HIACG 280
Query: 115 NEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYEL 174
+H ALVS GE ++WG + G+LG G + P+++++ S I +
Sbjct: 281 VKHA-ALVS----RQGE---VFTWGEASGGRLGHGMGKDVTGPQLIESLAATS---IDFV 329
Query: 175 ACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVC 234
ACG FHT +T E W G + G LGHGT S +P + E + +
Sbjct: 330 ACGEFHTCAVTM------TGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIAS 383
Query: 235 VDCGLFHTSVVSSAGDVWSWG 255
V CG +HT++++S G ++++G
Sbjct: 384 VSCGPWHTALITSTGQLFTFG 404
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 100/250 (40%), Gaps = 68/250 (27%)
Query: 51 ESLRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSF---ETSFIPAPVWDFHGRV 107
E L+I +V G + I + G L+ +G + G L ET F P V G
Sbjct: 377 EGLQIASVSCGPWHTALITSTGQLFTFG----DGTFGVLGHGDKETVFYPREVESLSGLR 432
Query: 108 VVKVSCGNEHVVALVSATESYNGEDLV---CYSWGHNNHGQLGVGDRESRLHPEVVK--- 161
+ V+CG H A+V +++ + ++WG + +LG GD+E RL P V
Sbjct: 433 TIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALI 492
Query: 162 --TF--------------------------------------------DEESPWAIYELA 175
TF D+ + + E+A
Sbjct: 493 DHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLVEDKLTKDCVEEIA 552
Query: 176 CGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCV 235
CGA+H A+LT S + +T+G+G NG+LGHG + PT V L E H+ +
Sbjct: 553 CGAYHVAVLT--------SRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKER-HVKNI 603
Query: 236 DCGLFHTSVV 245
CG T+ +
Sbjct: 604 ACGSNFTAAI 613
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 204 GDNGQLGH-GTTQSTLLPTPVIELPENVHLVC--VDCGLFHTSVVSSAGDVWSWGMQKGL 260
G + +G+ G+ L+P P L NV L + CG+ H ++VS G+V++WG G
Sbjct: 246 GADKNIGYLGSRSDVLIPKP---LESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGG 302
Query: 261 GLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWGRG 320
L + + D P+LI D V CG HT V G +++ WG G
Sbjct: 303 RLGHGMGK------DVTGPQLI----ESLAATSIDFVACGEFHTCAVTMTG-EIYTWGDG 351
Query: 321 --RSGVLGNGEGVDCHIPTLVLWP 342
+G+LG+G V IP + P
Sbjct: 352 THNAGLLGHGTDVSHWIPKRISGP 375
>AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:28906952-28911325 FORWARD LENGTH=1103
Length = 1103
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 125/291 (42%), Gaps = 35/291 (12%)
Query: 58 VKAGGMMSLAIDNRGTLWMWGNCPQE-SKEGALSFETSFIPAPVW-DFHGRVVVKVSCGN 115
V G + A+ G L+ WG+ G S + +IP + G V VSCG
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 398
Query: 116 EHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYELA 175
H + S +++G G LG GD+E+ +P V++ S ++
Sbjct: 399 WHTALITSYGR--------LFTFGDGTFGVLGHGDKETVQYPREVESL---SGLRTIAVS 447
Query: 176 CGAFHTA----LLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPE-NV 230
CG +HTA ++ + N S +T+G GD +LGHG L PT V L + N
Sbjct: 448 CGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNF 507
Query: 231 HLVCVDCGLFHTSVVSSAGDVWSWG--MQKGLGLCPDVSRAESDSGDALNPRLISCEPHQ 288
H + CG T ++++G V++ G + LG + D L +
Sbjct: 508 HKIA--CGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFV------ 559
Query: 289 PKFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
+++ CGA H + +V+ WG+G +G LG+G+ D +PT+V
Sbjct: 560 ------EEISCGAYHVAALTSRN-EVYTWGKGANGRLGHGDLEDRKVPTIV 603
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 31/215 (14%)
Query: 136 YSWGH---NNHGQLGVGDRESRLHPE----VVKTFDEESPWAIYELACGAFHTALLTRKK 188
Y WG +N ++G+ S L V K + ++++ACG H A +TR+
Sbjct: 241 YIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQG 300
Query: 189 NPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSA 248
+T+G G+LGHG + P V L + V CG FHT V+ A
Sbjct: 301 E--------IFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLA 352
Query: 249 GDVWSWGMQKG----LGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKVVCGAAHT 304
G++++WG LG D+S P+ I+ V CG HT
Sbjct: 353 GELYTWGDGTHNVGLLGHGSDISH--------WIPKRIAGSLEGLHVAS---VSCGPWHT 401
Query: 305 VVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
++ G +++ +G G GVLG+G+ P V
Sbjct: 402 ALITSYG-RLFTFGDGTFGVLGHGDKETVQYPREV 435
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 26/151 (17%)
Query: 96 IPAPV-WDFHGRVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESR 154
+PA + ++FH K++CG+ V L ++ + ++ G +GQLG + +
Sbjct: 499 VPALIDYNFH-----KIACGHSLTVGLTTSGQ--------VFTMGSTVYGQLGNLQTDGK 545
Query: 155 LHPEVVKTFDEESPWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTT 214
L P +V+ D+ + + E++CGA+H A LT S + +T+G+G NG+LGHG
Sbjct: 546 L-PCLVE--DKLASEFVEEISCGAYHVAALT--------SRNEVYTWGKGANGRLGHGDL 594
Query: 215 QSTLLPTPVIELPENVHLVCVDCGLFHTSVV 245
+ +PT ++E ++ H+ + CG +T+ +
Sbjct: 595 EDRKVPT-IVEALKDRHVKYIACGSNYTAAI 624
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 59/140 (42%), Gaps = 31/140 (22%)
Query: 108 VVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEES 167
V ++SCG HV AL S E Y+WG +G+LG GD E R P +V+ +
Sbjct: 559 VEEISCGAYHVAALTSRNE--------VYTWGKGANGRLGHGDLEDRKVPTIVEALKDRH 610
Query: 168 PWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELP 227
+ +ACG+ +TA + K A +S C T +L G T+
Sbjct: 611 ---VKYIACGSNYTAAICLHKWVSGAEQSQCSTC------RLAFGFTRK----------- 650
Query: 228 ENVHLVCVDCGLFHTSVVSS 247
C +CGL H SS
Sbjct: 651 ---RHNCYNCGLVHCHSCSS 667
>AT1G27060.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr1:9395023-9396673 FORWARD
LENGTH=386
Length = 386
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 110/266 (41%), Gaps = 42/266 (15%)
Query: 74 LWMWGNCPQESKEGALSFETSFIPAPVWDFHGRVVVKVSCGNEHVVALVSATESYNGEDL 133
+W WG + + G + +P + + ++CG HV+AL S +
Sbjct: 17 VWSWG-AGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGK------- 68
Query: 134 VCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYELACGAFHTALLTRKKNPDDA 193
++WG + GQLG GD + P++V FD+ I + A G H+ +
Sbjct: 69 -VFTWGRGSSGQLGHGDILNITLPKLVSFFDDS---VITQAAAGWSHSGFV--------- 115
Query: 194 SESIC-WTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVW 252
S+S C +T G G GQLGHG T S P V N + V CG+ H+ V+ + V
Sbjct: 116 SDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHF-NNDSVKMVACGMRHSLVLFAGNQVC 174
Query: 253 SWGMQK--GLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKVVCGAAHTVVVGQE 310
+G K LG S D + + C K + ++ H+ + +
Sbjct: 175 GFGSGKRGQLGF----------SSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISAD 224
Query: 311 GYKVWAWGRGRSGVLGNGEGVDCHIP 336
G + ++WGRG G G D H P
Sbjct: 225 G-QFFSWGRGFCG------GPDVHAP 243
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 14/98 (14%)
Query: 251 VWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKVVCGAAHTVVVGQE 310
VWSWG D + D L P+L+S P + CG AH + +
Sbjct: 17 VWSWGAGT------DGQLGTTKLQDELLPQLLSLT----SLPSISMLACGGAHVIAL-TS 65
Query: 311 GYKVWAWGRGRSGVLGNGEGVDCHIPTLVLWPPMLDDS 348
G KV+ WGRG SG LG+G+ ++ +P LV DDS
Sbjct: 66 GGKVFTWGRGSSGQLGHGDILNITLPKLV---SFFDDS 100
>AT5G08710.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:2834858-2837866 REVERSE
LENGTH=434
Length = 434
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 112/297 (37%), Gaps = 35/297 (11%)
Query: 55 ICAVKAGGMMSLAIDNRGTLWMWG-NCPQESKEGALSFETSFIPAPVWDFHGRVVVKVSC 113
I + AG S AI G L+MWG N + G + +P V HG + V+
Sbjct: 136 ILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVAL 195
Query: 114 GNEHVVALVSATESYNGEDLVCYSWGHNNHGQL-GVGDRESRLHPEVVKTFDEESPWAIY 172
G+EH VA+ E + GH + L G+ S P ++K E +
Sbjct: 196 GSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIK---ELEGIKVT 252
Query: 173 ELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHL 232
+A G H+A + + FG ++G G ++ P+ + E+P
Sbjct: 253 NVAAGLLHSACTDENGSA--------FMFGEKSINKMGFGGVRNATTPSIISEVPYAEE- 303
Query: 233 VCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFP 292
V CG +HT VV+ G++++WG + L D + P L S
Sbjct: 304 --VACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLES--------- 352
Query: 293 DPDKVVCGAAHTVVVGQEGYKVWAW----------GRGRSGVLGNGEGVDCHIPTLV 339
+V CG HT + W W G G LG+G VD P +V
Sbjct: 353 TVSQVSCGWKHTAAISDNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMV 409
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 27/203 (13%)
Query: 51 ESLRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFETSFIPAPVWDFHGRVVVK 110
E +++ V AG + S D G+ +M+G +K G + P+ + + +
Sbjct: 247 EGIKVTNVAAGLLHSACTDENGSAFMFGE-KSINKMGFGGVRNATTPSIISEV--PYAEE 303
Query: 111 VSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWA 170
V+CG H + E Y+WG N +G LG P V+ ES
Sbjct: 304 VACGGYHTCVVTRGGE--------LYTWGSNENGCLGTDSTYVSHSPVRVEGPFLES--T 353
Query: 171 IYELACGAFHTALLTRKKNPDDASESICW-----TF---GRGDNGQLGHGTTQSTLLPTP 222
+ +++CG HTA ++ D+ + W TF G GQLGHG+ P
Sbjct: 354 VSQVSCGWKHTAAIS-----DNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARP-A 407
Query: 223 VIELPENVHLVCVDCGLFHTSVV 245
+++L +NV V + CG HT+ V
Sbjct: 408 MVDLGKNVRAVHISCGFNHTAAV 430
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 18/129 (13%)
Query: 138 WGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYELACGAFHTALLTRKKNPDDASESI 197
WG ++G+LG+G+ +S+ P V + S I +ACG HT LT +
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHS---ITAVACGGAHTLFLTETRR-------- 102
Query: 198 CWTFGRGDNGQLGHGTTQSTLL-PTPVIELPENVHLVCVDCGLFHTSVVSSAGDVWSWGM 256
+ G D GQLG +S + P V L +++ + + G +H++ ++ G+++ WG
Sbjct: 103 VFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDI--LHISAGYYHSAAITVDGELYMWGK 160
Query: 257 ----QKGLG 261
Q GLG
Sbjct: 161 NSSGQLGLG 169
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 97/238 (40%), Gaps = 24/238 (10%)
Query: 108 VVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEES 167
++ +S G H SA + +GE Y WG N+ GQLG+G + +R+ V +
Sbjct: 136 ILHISAGYYH-----SAAITVDGE---LYMWGKNSSGQLGLGKKAARV-VRVPTKVEALH 186
Query: 168 PWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQL-GHGTTQSTLLPTPVIEL 226
I +A G+ H+ +T G G L G + S P + EL
Sbjct: 187 GITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKEL 246
Query: 227 PENVHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEP 286
E + + V GL H++ G + +G + + R +A P +IS
Sbjct: 247 -EGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVR------NATTPSIIS--- 296
Query: 287 HQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLVLWPPM 344
+ P ++V CG HT VV + G +++ WG +G LG H P V P +
Sbjct: 297 ---EVPYAEEVACGGYHTCVVTRGG-ELYTWGSNENGCLGTDSTYVSHSPVRVEGPFL 350
>AT3G26100.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:9538063-9540149 FORWARD
LENGTH=532
Length = 532
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 125/286 (43%), Gaps = 36/286 (12%)
Query: 60 AGGMMSLAIDNRGTLWMWG-NCPQESKEGALSFETSFIPAPVWDFHGRVVVKVSCGNEHV 118
AG S+A+ ++G ++ +G N + G E PV G +++ + G
Sbjct: 150 AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARI--QPVRSLQGVRIIQAAAGAART 207
Query: 119 VALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESR--LHPEVVKTFDEESPWAIYELAC 176
+ L+S +D Y+ G + G+ G + ++ P++V + + + A
Sbjct: 208 M-LIS-------DDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKN---IFVVQAAI 256
Query: 177 GAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVD 236
G + TA+L+R E +TF G++G+LGH T + + P P++ ENV +V +
Sbjct: 257 GNYFTAVLSR--------EGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIA 308
Query: 237 ---CGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPD 293
C L + + V+S G G L D PR+I E Q
Sbjct: 309 AGYCYLLALACQPNGMSVYSVGCGLGGKL------GHGSRTDEKYPRVI--EQFQILNLQ 360
Query: 294 PDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
P V GA H VVGQ+G +V WG GR G LG+G +P +V
Sbjct: 361 PRVVAAGAWHAAVVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVV 405
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 124/288 (43%), Gaps = 33/288 (11%)
Query: 51 ESLRICAVKAGGMMSLAIDNRGTLWM--WGNCPQESKEGALSFETSFIPAPVWD-FHGRV 107
+++ + G + + G ++ WGN + + G + P P+
Sbjct: 247 KNIFVVQAAIGNYFTAVLSREGKVYTFSWGN---DGRLGHQTEAADVEPRPLLGPLENVP 303
Query: 108 VVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFD--E 165
VV+++ G +++AL NG + YS G G+LG G R +P V++ F
Sbjct: 304 VVQIAAGYCYLLALACQP---NG--MSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILN 358
Query: 166 ESPWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIE 225
P + A GA+H A++ + +C T+G G G LGHG + +P V+E
Sbjct: 359 LQPRVV---AAGAWHAAVVGQDGR-------VC-TWGWGRYGCLGHGNEECESVPK-VVE 406
Query: 226 LPENVHLVCVDCGLFHTSVVSSAGDVWSWGM--QKGLGLCPDVSRAESDSGDALNPRLIS 283
+V V V G + T VVS GDV+S+G LG P + + L+P +++
Sbjct: 407 GLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVT 466
Query: 284 ----CEPHQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGN 327
+ + + AHT + + G K++A+G G G LG
Sbjct: 467 SLKQVNERMVQISLTNSIYWN-AHTFALTESG-KLFAFGAGDQGQLGT 512
>AT3G26100.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:9538458-9540149 FORWARD
LENGTH=432
Length = 432
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 125/286 (43%), Gaps = 36/286 (12%)
Query: 60 AGGMMSLAIDNRGTLWMWG-NCPQESKEGALSFETSFIPAPVWDFHGRVVVKVSCGNEHV 118
AG S+A+ ++G ++ +G N + G E PV G +++ + G
Sbjct: 50 AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARI--QPVRSLQGVRIIQAAAGAART 107
Query: 119 VALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESR--LHPEVVKTFDEESPWAIYELAC 176
+ L+S +D Y+ G + G+ G + ++ P++V + + + A
Sbjct: 108 M-LIS-------DDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKN---IFVVQAAI 156
Query: 177 GAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVD 236
G + TA+L+R E +TF G++G+LGH T + + P P++ ENV +V +
Sbjct: 157 GNYFTAVLSR--------EGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIA 208
Query: 237 ---CGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPD 293
C L + + V+S G G L D PR+I E Q
Sbjct: 209 AGYCYLLALACQPNGMSVYSVGCGLGGKL------GHGSRTDEKYPRVI--EQFQILNLQ 260
Query: 294 PDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
P V GA H VVGQ+G +V WG GR G LG+G +P +V
Sbjct: 261 PRVVAAGAWHAAVVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVV 305
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 27/228 (11%)
Query: 108 VVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFD--E 165
VV+++ G +++AL NG + YS G G+LG G R +P V++ F
Sbjct: 204 VVQIAAGYCYLLALACQP---NG--MSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILN 258
Query: 166 ESPWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIE 225
P + A GA+H A++ + +C T+G G G LGHG + +P V+E
Sbjct: 259 LQPRVV---AAGAWHAAVVGQDGR-------VC-TWGWGRYGCLGHGNEECESVPK-VVE 306
Query: 226 LPENVHLVCVDCGLFHTSVVSSAGDVWSWGM--QKGLGLCPDVSRAESDSGDALNPRLIS 283
+V V V G + T VVS GDV+S+G LG P + + L+P +++
Sbjct: 307 GLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVT 366
Query: 284 ----CEPHQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGN 327
+ + + AHT + + G K++A+G G G LG
Sbjct: 367 SLKQVNERMVQISLTNSIYWN-AHTFALTESG-KLFAFGAGDQGQLGT 412
>AT5G48330.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:19585989-19587729 FORWARD
LENGTH=454
Length = 454
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 134/355 (37%), Gaps = 88/355 (24%)
Query: 33 IGLHPSDSSTSVSEGEGKESLRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFE 92
I + DS + EG E++ + A A G++S AI + G+LW+WG SK G L
Sbjct: 117 IVIDSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSLWVWG----RSKRGQLGLG 172
Query: 93 TSFI----PAPVWDFHGRVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLG- 147
I P+ V + VVKVS G H +AL D + WG+ G++G
Sbjct: 173 NGIIEARVPSRVENLAAEHVVKVSLGWGHALALTV--------DGKVFGWGYVADGRVGN 224
Query: 148 ------------VGDRESRLH------------PEVVKTFDEES--PWA----------- 170
+ D + H +VV+ +E+ P A
Sbjct: 225 VGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVEAMSKENDMPIAWEPCLVEETCN 284
Query: 171 --IYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPE 228
+ ++ACG+ H+ +L A +I GQLG + P + E P
Sbjct: 285 EKVADIACGSDHSLILCHDGTLLSAGSNIY--------GQLGRSKQDLGMKPVDITESP- 335
Query: 229 NVHLVCVDCGLFHTSVVSSAGD----VWSWGMQKGLGLCPDVSRAESDSGDALNPRLISC 284
+ + GL H+ + + G+ W W + LG P +
Sbjct: 336 ----ISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRG--------------KPENLPR 377
Query: 285 EPHQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
E P V G H++ V ++G + W WG G++G LG G D P L+
Sbjct: 378 EVEGFDGESPASVSAGRVHSLCVTEKG-EAWVWGCGKNGRLGLGSSSDEPEPMLL 431
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 32/181 (17%)
Query: 87 GALSFETSFIPAPVWDFHGRVVVK--------VSCGNEHVVALVSATESYNGEDLVCYSW 138
GAL +S IP D + VV +S G+ H +A+ S+ E ++W
Sbjct: 55 GALGLSSSSIPGMGMDAYEPTVVSNLPSDISSISAGHYHSLAVTSSGE--------IWAW 106
Query: 139 GHNNHGQLG---VGDRESRLHPEVVKTFDEESPWAIYELACGAFHTALLTRKKNPDDASE 195
G N+ GQLG + R+SR P+ V+ + + A + A G A+ DD S
Sbjct: 107 GRNDEGQLGRIVIDSRDSRSEPKRVEGLENVNVQAAF--ASGVVSAAI------GDDGS- 157
Query: 196 SICWTFGRGDNGQLGHGT-TQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVWSW 254
W +GR GQLG G +P+ V L H+V V G H ++ G V+ W
Sbjct: 158 --LWVWGRSKRGQLGLGNGIIEARVPSRVENLAAE-HVVKVSLGWGHALALTVDGKVFGW 214
Query: 255 G 255
G
Sbjct: 215 G 215
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 158 EVVKTFDEESPWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGH------ 211
++ K + +S + + L G ++ R+ +FG G+ G LG
Sbjct: 11 QISKVYSSDSRFCTHVLFNG-----VVRRQFTSTSGERRTVMSFGDGNLGALGLSSSSIP 65
Query: 212 GTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAES 271
G PT V LP ++ + G +H+ V+S+G++W+WG + R
Sbjct: 66 GMGMDAYEPTVVSNLPSDIS--SISAGHYHSLAVTSSGEIWAWGRNDE----GQLGRIVI 119
Query: 272 DSGDALNPRLISCEPHQPKFPDPDKVVCGAAHTVV---VGQEGYKVWAWGRGRSGVLGNG 328
DS D+ + EP + + + V A VV +G +G +W WGR + G LG G
Sbjct: 120 DSRDSRS------EPKRVEGLENVNVQAAFASGVVSAAIGDDG-SLWVWGRSKRGQLGLG 172
Query: 329 EG-VDCHIPTLV 339
G ++ +P+ V
Sbjct: 173 NGIIEARVPSRV 184
>AT5G48330.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:19585989-19587729 FORWARD
LENGTH=455
Length = 455
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 135/359 (37%), Gaps = 88/359 (24%)
Query: 29 LNKFIGLHPSDSSTSVSEGEGKESLRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGA 88
L + + DS + EG E++ + A A G++S AI + G+LW+WG SK G
Sbjct: 114 LGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSLWVWG----RSKRGQ 169
Query: 89 LSFETSFI----PAPVWDFHGRVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHG 144
L I P+ V + VVKVS G H +AL D + WG+ G
Sbjct: 170 LGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTV--------DGKVFGWGYVADG 221
Query: 145 QLG-------------VGDRESRLH------------PEVVKTFDEES--PWA------- 170
++G + D + H +VV+ +E+ P A
Sbjct: 222 RVGNVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVEAMSKENDMPIAWEPCLVE 281
Query: 171 ------IYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVI 224
+ ++ACG+ H+ +L A +I GQLG + P +
Sbjct: 282 ETCNEKVADIACGSDHSLILCHDGTLLSAGSNIY--------GQLGRSKQDLGMKPVDIT 333
Query: 225 ELPENVHLVCVDCGLFHTSVVSSAGD----VWSWGMQKGLGLCPDVSRAESDSGDALNPR 280
E P + + GL H+ + + G+ W W + LG P
Sbjct: 334 ESP-----ISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRG--------------KPE 374
Query: 281 LISCEPHQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLV 339
+ E P V G H++ V ++G + W WG G++G LG G D P L+
Sbjct: 375 NLPREVEGFDGESPASVSAGRVHSLCVTEKG-EAWVWGCGKNGRLGLGSSSDEPEPMLL 432
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 78/182 (42%), Gaps = 33/182 (18%)
Query: 87 GALSFETSFIPAPVWDFHGRVVVK--------VSCGNEHVVALVSATESYNGEDLVCYSW 138
GAL +S IP D + VV +S G+ H +A+ S+ E ++W
Sbjct: 55 GALGLSSSSIPGMGMDAYEPTVVSNLPSDISSISAGHYHSLAVTSSGE--------IWAW 106
Query: 139 GHNNHGQLGV----GDRESRLHPEVVKTFDEESPWAIYELACGAFHTALLTRKKNPDDAS 194
G N+ GQLG R+SR P+ V+ + + A + A G A+ DD S
Sbjct: 107 GRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAF--ASGVVSAAI------GDDGS 158
Query: 195 ESICWTFGRGDNGQLGHGT-TQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVWS 253
W +GR GQLG G +P+ V L H+V V G H ++ G V+
Sbjct: 159 ---LWVWGRSKRGQLGLGNGIIEARVPSRVENLAAE-HVVKVSLGWGHALALTVDGKVFG 214
Query: 254 WG 255
WG
Sbjct: 215 WG 216
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 27/192 (14%)
Query: 158 EVVKTFDEESPWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGH------ 211
++ K + +S + + L G ++ R+ +FG G+ G LG
Sbjct: 11 QISKVYSSDSRFCTHVLFNG-----VVRRQFTSTSGERRTVMSFGDGNLGALGLSSSSIP 65
Query: 212 GTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAES 271
G PT V LP ++ + G +H+ V+S+G++W+WG L V +
Sbjct: 66 GMGMDAYEPTVVSNLPSDIS--SISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSR 123
Query: 272 DSGDALNPRLISCEPHQPKFPDPDKVVCGAAHTVV---VGQEGYKVWAWGRGRSGVLGNG 328
DS EP + + + V A VV +G +G +W WGR + G LG G
Sbjct: 124 DS---------RSEPKRVEGLENVNVQAAFASGVVSAAIGDDG-SLWVWGRSKRGQLGLG 173
Query: 329 EG-VDCHIPTLV 339
G ++ +P+ V
Sbjct: 174 NGIIEARVPSRV 185
>AT5G60870.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487771 REVERSE
LENGTH=445
Length = 445
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 37/216 (17%)
Query: 54 RICAVKAGGMMSLAIDNRGTLWMWGN-----------CPQESKEGALSFETSFIPAPVWD 102
+I A+ G + AI G L+MWG ++ G LS + V
Sbjct: 205 KISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTV-- 262
Query: 103 FHGRVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKT 162
V VSCG +AL + +N WG N++ +LG GD P V +
Sbjct: 263 ----PVASVSCGGFFTMALTKEGQLWN--------WGANSNYELGRGDNLGGWEPMPVPS 310
Query: 163 FDEESPWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTP 222
+ I ++ACG +H+ LT E ++G G +GQLG + ++ +PT
Sbjct: 311 LEGVR---ITQIACGGYHSLALTE--------EGKVLSWGHGGHGQLGSSSLRNQKVPTE 359
Query: 223 VIELPENVHLVCVDCGLFHTSVVSSAGDVWSWGMQK 258
+ L + +V + G ++ ++ G++W WG K
Sbjct: 360 IEALADK-KIVFIASGGSSSAAITDGGELWMWGNAK 394
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 81/208 (38%), Gaps = 46/208 (22%)
Query: 133 LVCYSWGHNNHGQLGVGDRESRLHPEVVKTF-----------------DEESPWAIYELA 175
L +SWG GQLG G E R++P V D +S ++
Sbjct: 48 LQLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGIS 107
Query: 176 CGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCV 235
CG FH+ L + W +G+GD G+LG G S +P + L E + C+
Sbjct: 108 CGLFHSGLTI---------DGDLWIWGKGDGGRLGFGQENSVFVPN-LNPLFEEHSIRCI 157
Query: 236 DCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLI----SCEPHQPKF 291
G H+ ++ GDV++WG L V E L PR + C+
Sbjct: 158 ALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRE------LVPRRVDDSWDCK------ 205
Query: 292 PDPDKVVCGAAHTVVVGQEGYKVWAWGR 319
+ HT + + G +++ WGR
Sbjct: 206 --ISAIATSGTHTAAITESG-ELYMWGR 230
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 129/325 (39%), Gaps = 63/325 (19%)
Query: 35 LHPSDSSTSVSEGEGKESLRICAVKAG---GMMSLAIDNRGTLWMWGNCPQESKEGALSF 91
L SD S S+++ G+ + + G G+ + G LW+WG + G L F
Sbjct: 79 LFRSDQSFSLAQTPGRIDADSSSFRIGISCGLFHSGLTIDGDLWIWG----KGDGGRLGF 134
Query: 92 ---ETSFIPA--PVWDFHGRVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQL 146
+ F+P P+++ H + ++ G H VAL ++ G+ ++WG+ G L
Sbjct: 135 GQENSVFVPNLNPLFEEHS--IRCIALGGLHSVAL-----THQGD---VFTWGYGGFGAL 184
Query: 147 GVGDRESRLHPEVVKTFDEESPWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDN 206
G L P V D+ I +A HTA +T ++ E W GD
Sbjct: 185 GHKVYTRELVPRRV---DDSWDCKISAIATSGTHTAAIT------ESGELYMWGREEGDG 235
Query: 207 GQLGHGTTQST-----LLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLG 261
+P+ V L V + V CG F T ++ G +W+WG
Sbjct: 236 RLGLGPGRGPNEGGGLSVPSKVKAL--TVPVASVSCGGFFTMALTKEGQLWNWGAN---- 289
Query: 262 LCPDVSRAESDSGDALNPRLISCEPHQPKFPDPD-------KVVCGAAHTVVVGQEGYKV 314
S E GD L EP P P ++ CG H++ + +EG KV
Sbjct: 290 -----SNYELGRGDNLG----GWEP----MPVPSLEGVRITQIACGGYHSLALTEEG-KV 335
Query: 315 WAWGRGRSGVLGNGEGVDCHIPTLV 339
+WG G G LG+ + +PT +
Sbjct: 336 LSWGHGGHGQLGSSSLRNQKVPTEI 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 22/160 (13%)
Query: 52 SLRICAVKAGGMMSLAIDNRGTLWMWG-NCPQESKEGALSFETSFIPAPVWDFHGRVVVK 110
++ + +V GG ++A+ G LW WG N E G + P PV G + +
Sbjct: 261 TVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRG--DNLGGWEPMPVPSLEGVRITQ 318
Query: 111 VSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWA 170
++CG H +AL E+ SWGH HGQLG ++ P ++ ++
Sbjct: 319 IACGGYHSLALT--------EEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKK--- 367
Query: 171 IYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLG 210
I +A G +A +T D E W +G + QLG
Sbjct: 368 IVFIASGGSSSAAIT------DGGE--LWMWGNAKDFQLG 399
>AT5G60870.3 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487257 REVERSE
LENGTH=276
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 37/216 (17%)
Query: 54 RICAVKAGGMMSLAIDNRGTLWMWGN-----------CPQESKEGALSFETSFIPAPVWD 102
+I A+ G + AI G L+MWG ++ G LS + V
Sbjct: 36 KISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTV-- 93
Query: 103 FHGRVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKT 162
V VSCG +AL + +N WG N++ +LG GD P V +
Sbjct: 94 ----PVASVSCGGFFTMALTKEGQLWN--------WGANSNYELGRGDNLGGWEPMPVPS 141
Query: 163 FDEESPWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTP 222
+ I ++ACG +H+ LT E ++G G +GQLG + ++ +PT
Sbjct: 142 LEGVR---ITQIACGGYHSLALTE--------EGKVLSWGHGGHGQLGSSSLRNQKVPTE 190
Query: 223 VIELPENVHLVCVDCGLFHTSVVSSAGDVWSWGMQK 258
+ L + +V + G ++ ++ G++W WG K
Sbjct: 191 IEALADK-KIVFIASGGSSSAAITDGGELWMWGNAK 225
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 22/160 (13%)
Query: 52 SLRICAVKAGGMMSLAIDNRGTLWMWG-NCPQESKEGALSFETSFIPAPVWDFHGRVVVK 110
++ + +V GG ++A+ G LW WG N E G + P PV G + +
Sbjct: 92 TVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRG--DNLGGWEPMPVPSLEGVRITQ 149
Query: 111 VSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWA 170
++CG H +AL E+ SWGH HGQLG ++ P ++ ++
Sbjct: 150 IACGGYHSLALT--------EEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKK--- 198
Query: 171 IYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLG 210
I +A G +A +T D E W +G + QLG
Sbjct: 199 IVFIASGGSSSAAIT------DGGE--LWMWGNAKDFQLG 230
>AT1G19880.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr1:6900648-6903818 REVERSE
LENGTH=538
Length = 538
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 100/245 (40%), Gaps = 38/245 (15%)
Query: 109 VKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESP 168
V C + H VAL CY+WG N GQLG GD R P VV +
Sbjct: 61 VATGCASFHCVALDVEGR--------CYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHK- 111
Query: 169 WAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELP- 227
I + A G HT +++ D +S+ FG GQLG G+ ++ + V P
Sbjct: 112 --IVKAAAGRNHTVVVS------DDGQSL--GFGWNKYGQLGLGSAKNGFVSVEVESTPL 161
Query: 228 ---ENVHLVCVDCGLFHTSVVSS--AGDVWSWGM-QKG-LGLCPDVSRAESDSGDAL--- 277
+ + V CG T +SS + + G+ Q G LG D DS L
Sbjct: 162 PCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYE 221
Query: 278 ---NPRLISCEPHQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCH 334
P+ I+ + KV CG HTV V + GY V+ WG G G LG+ E D
Sbjct: 222 AQPRPKAIASLAGETIV----KVACGTNHTVAVDKNGY-VYTWGFGGYGRLGHREQKDEW 276
Query: 335 IPTLV 339
P +
Sbjct: 277 APRRI 281
>AT3G15430.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:5209408-5211562 FORWARD
LENGTH=488
Length = 488
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 103/234 (44%), Gaps = 28/234 (11%)
Query: 108 VVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEES 167
VV+++ G +V+A+ +D YS+G ++ LG G+++ L P V++ F +
Sbjct: 271 VVQIAAGPSYVLAVT--------QDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKG 322
Query: 168 PWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELP 227
I ++ G H L S +T+G+G G LGHG + P ++ L
Sbjct: 323 -IHILRVSAGDEHAVALD--------SNGRVYTWGKGYCGALGHGDENDKITPQVLVNL- 372
Query: 228 ENVHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISC-EP 286
N V V T V+ G ++ +G G G R SD L PR++ C +P
Sbjct: 373 NNCLAVQVCARKRKTFVLVEGGLLYGFGWM-GFGSLGFPDRGVSD--KVLRPRVLECLKP 429
Query: 287 HQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLVL 340
H+ +V G HT+VV Q G +++ +G LG+ C PT +
Sbjct: 430 HR-----VSQVSTGLYHTIVVTQRG-RIFGFGDNERAQLGHDSLRGCLEPTEIF 477
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 28/228 (12%)
Query: 119 VALVSATESYN------GEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIY 172
VA VSAT++++ G+ L C + G L R P++V+ + +P
Sbjct: 165 VAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFR--PKLVEAL-KGTPCK-- 219
Query: 173 ELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHL 232
++A G T L+R E +T G +GQLGHG T +P V L +
Sbjct: 220 QVAAGLHFTVFLSR--------EGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPV 271
Query: 233 VCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFP 292
V + G + V+ G V+S+G G C + D L PR+I + + K
Sbjct: 272 VQIAAGPSYVLAVTQDGSVYSFG--SGSNFC----LGHGEQQDELQPRVI--QAFKRKGI 323
Query: 293 DPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLVL 340
+V G H V + G +V+ WG+G G LG+G+ D P +++
Sbjct: 324 HILRVSAGDEHAVALDSNG-RVYTWGKGYCGALGHGDENDKITPQVLV 370
>AT3G15430.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:5209408-5211562 FORWARD
LENGTH=488
Length = 488
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 103/234 (44%), Gaps = 28/234 (11%)
Query: 108 VVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEES 167
VV+++ G +V+A+ +D YS+G ++ LG G+++ L P V++ F +
Sbjct: 271 VVQIAAGPSYVLAVT--------QDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKG 322
Query: 168 PWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELP 227
I ++ G H L S +T+G+G G LGHG + P ++ L
Sbjct: 323 -IHILRVSAGDEHAVALD--------SNGRVYTWGKGYCGALGHGDENDKITPQVLVNL- 372
Query: 228 ENVHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISC-EP 286
N V V T V+ G ++ +G G G R SD L PR++ C +P
Sbjct: 373 NNCLAVQVCARKRKTFVLVEGGLLYGFGWM-GFGSLGFPDRGVSD--KVLRPRVLECLKP 429
Query: 287 HQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLVL 340
H+ +V G HT+VV Q G +++ +G LG+ C PT +
Sbjct: 430 HR-----VSQVSTGLYHTIVVTQRG-RIFGFGDNERAQLGHDSLRGCLEPTEIF 477
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 28/228 (12%)
Query: 119 VALVSATESYN------GEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIY 172
VA VSAT++++ G+ L C + G L R P++V+ + +P
Sbjct: 165 VAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFR--PKLVEAL-KGTPCK-- 219
Query: 173 ELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHL 232
++A G T L+R E +T G +GQLGHG T +P V L +
Sbjct: 220 QVAAGLHFTVFLSR--------EGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPV 271
Query: 233 VCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFP 292
V + G + V+ G V+S+G G C + D L PR+I + + K
Sbjct: 272 VQIAAGPSYVLAVTQDGSVYSFG--SGSNFC----LGHGEQQDELQPRVI--QAFKRKGI 323
Query: 293 DPDKVVCGAAHTVVVGQEGYKVWAWGRGRSGVLGNGEGVDCHIPTLVL 340
+V G H V + G +V+ WG+G G LG+G+ D P +++
Sbjct: 324 HILRVSAGDEHAVALDSNG-RVYTWGKGYCGALGHGDENDKITPQVLV 370
>AT3G02510.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:522524-524536 REVERSE
LENGTH=310
Length = 310
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 34/181 (18%)
Query: 53 LRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFETSFIPAPVWDFHGRVVVKVS 112
L + V AGG S+ + G +W WG P P D ++ V V
Sbjct: 150 LTVRQVAAGGTHSVVLTREGHVWTWGQ-----------------PWPPGDIK-QISVPVR 191
Query: 113 CGNEHVVALVSATESYN---GEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPW 169
V L++ +N ED +WG+N +GQLG GD + HP V+ D+ +
Sbjct: 192 VQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLT-- 249
Query: 170 AIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTT--QSTLLPTPVIELP 227
+ ++A G +H+ LT D E W GRG++G+LG G S ++P V L
Sbjct: 250 -LVDIAAGGWHSTALT------DKGEVYGW--GRGEHGRLGLGDNDKSSKMVPQKVNLLA 300
Query: 228 E 228
E
Sbjct: 301 E 301
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 101/250 (40%), Gaps = 51/250 (20%)
Query: 48 EGKESLRICAVKAGGMMSLAIDNRGTLWMWGNCPQESKEGALSFETSFIPAPVWDFHGRV 107
E E + +V +G SLAI + GT++ WG + + +T IP+ V
Sbjct: 33 EALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVK 92
Query: 108 VVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLG---VGDRESR-LHPEVVKTF 163
+ + + G H +A+ +Y +WG N +GQ G + D R + ++V
Sbjct: 93 ITQAAIGGWHCLAVDDQGRAY--------AWGGNEYGQCGEEPLKDEMGRPVRRDIVIPK 144
Query: 164 DEESPWAIYELACGAFHTALLTRKKN---------PDDASE------------------- 195
+ ++A G H+ +LTR+ + P D +
Sbjct: 145 RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVG 204
Query: 196 ----------SICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVV 245
+G + GQLG G TQ T P PV L +++ LV + G +H++ +
Sbjct: 205 AFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGL-DDLTLVDIAAGGWHSTAL 263
Query: 246 SSAGDVWSWG 255
+ G+V+ WG
Sbjct: 264 TDKGEVYGWG 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 137 SWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWAIYELACGAFHTALLTRKKNPDDASES 196
+WG GQLG+G E + VV+ + P+++ + G+ ++ + DD +
Sbjct: 9 AWGSGEDGQLGIGTNEEKEWACVVEALE---PYSVRSVVSGSRNSLAIC-----DDGT-- 58
Query: 197 ICWTFGRGDNGQLGHG-TTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVWSWG 255
+T+G G LGH T++ +P+ V L NV + G +H V G ++WG
Sbjct: 59 -MFTWGWNQRGTLGHQPETKTENIPSRVKALA-NVKITQAAIGGWHCLAVDDQGRAYAWG 116
Query: 256 MQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKVVCGAAHTVVVGQEGYKVW 315
+ G C + + + G + ++ + PK +V G H+VV+ +EG+ VW
Sbjct: 117 GNE-YGQCGE-EPLKDEMGRPVRRDIVIPKRCAPKL-TVRQVAAGGTHSVVLTREGH-VW 172
Query: 316 AWGR 319
WG+
Sbjct: 173 TWGQ 176
>AT5G60870.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487564 REVERSE
LENGTH=383
Length = 383
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 122/319 (38%), Gaps = 55/319 (17%)
Query: 35 LHPSDSSTSVSEGEGKESLRICAVKAG---GMMSLAIDNRGTLWMWGNCPQESKEGALSF 91
L SD S S+++ G+ + + G G+ + G LW+WG + G L F
Sbjct: 10 LFRSDQSFSLAQTPGRIDADSSSFRIGISCGLFHSGLTIDGDLWIWG----KGDGGRLGF 65
Query: 92 ---ETSFIPAPVWDFHGRVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGV 148
+ F+P F + ++ G H VAL ++ G+ ++WG+ G LG
Sbjct: 66 GQENSVFVPNLNPLFEEHSIRCIALGGLHSVAL-----THQGD---VFTWGYGGFGALGH 117
Query: 149 GDRESRLHPEVVKTFDEESPWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQ 208
L P V D+ I +A HTA +T ++ E W GD
Sbjct: 118 KVYTRELVPRRV---DDSWDCKISAIATSGTHTAAIT------ESGELYMWGREEGDGRL 168
Query: 209 LGHGT---TQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVWSWGMQKGLGLCPD 265
+ L P V + V CG F T ++ G +W+WG
Sbjct: 169 GLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGAN-------- 220
Query: 266 VSRAESDSGDALNPRLISCEPHQPKFPDPD-------KVVCGAAHTVVVGQEGYKVWAWG 318
S E GD L EP P P ++ CG H++ + +EG KV +WG
Sbjct: 221 -SNYELGRGDNLG----GWEP----MPVPSLEGVRITQIACGGYHSLALTEEG-KVLSWG 270
Query: 319 RGRSGVLGNGEGVDCHIPT 337
G G LG+ + +PT
Sbjct: 271 HGGHGQLGSSSLRNQKVPT 289
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 42/222 (18%)
Query: 54 RICAVKAGGMMSLAIDNRGTLWMWGN-----------CPQESKEGALSFETSFIPAPVWD 102
+I A+ G + AI G L+MWG ++ G LS + V
Sbjct: 136 KISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTV-- 193
Query: 103 FHGRVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKT 162
V VSCG +AL + +N WG N++ +LG GD P V +
Sbjct: 194 ----PVASVSCGGFFTMALTKEGQLWN--------WGANSNYELGRGDNLGGWEPMPVPS 241
Query: 163 FDEESPWAIYELACGAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTP 222
+ I ++ACG +H+ LT E ++G G +GQLG + ++ +PT
Sbjct: 242 LEGVR---ITQIACGGYHSLALTE--------EGKVLSWGHGGHGQLGSSSLRNQKVPTE 290
Query: 223 VIELPENVHLVCVDCGLFHTSV------VSSAGDVWSWGMQK 258
+ L + + G ++ ++ G++W WG K
Sbjct: 291 IEALADKKIVFIASGGSSSAAITGWDWFLTDGGELWMWGNAK 332
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 17/161 (10%)
Query: 52 SLRICAVKAGGMMSLAIDNRGTLWMWG-NCPQESKEGALSFETSFIPAPVWDFHGRVVVK 110
++ + +V GG ++A+ G LW WG N E G + P PV G + +
Sbjct: 192 TVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRG--DNLGGWEPMPVPSLEGVRITQ 249
Query: 111 VSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWA 170
++CG H +AL E+ SWGH HGQLG ++ P ++ ++
Sbjct: 250 IACGGYHSLALT--------EEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKK--- 298
Query: 171 IYELACGAFHTALLTR-KKNPDDASESICWTFGRGDNGQLG 210
I +A G +A +T D E W +G + QLG
Sbjct: 299 IVFIASGGSSSAAITGWDWFLTDGGE--LWMWGNAKDFQLG 337
>AT3G03790.2 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-967857 FORWARD LENGTH=1081
Length = 1081
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 101/261 (38%), Gaps = 56/261 (21%)
Query: 74 LWMWGNCPQESKEGALSFETSFIPAPVWDFHGRVVVKVSCGNEHVVALVSATESYNGEDL 133
++ WGN + G + +P V HG + VS H VA+ S +GE
Sbjct: 155 VFSWGNGAN-YQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAI-----STHGE-- 206
Query: 134 VCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWA----------------IYELACG 177
Y+WG G+LG HPE FD S A + +A
Sbjct: 207 -VYTWGFGRGGRLG--------HPE----FDIHSGQAAVITPRQVISGLGSRRVKAVAAA 253
Query: 178 AFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDC 237
HT + T + +T+G GQLG+ + + P V L +V V
Sbjct: 254 KHHTVIATEGGD--------VYTWGSNREGQLGYTSVDTQATPRKVTSL--KAKIVAVSA 303
Query: 238 GLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKV 297
HT+VVS G+V++WG K L S+S +PRL+ K +
Sbjct: 304 ANKHTAVVSDCGEVFTWGCNKEGQL----GYGTSNSASNYSPRLVDYL----KGKVFTAI 355
Query: 298 VCGAAHTVVVGQEGYKVWAWG 318
HT+V+ +G +V+ WG
Sbjct: 356 ASSKYHTLVLRNDG-EVYTWG 375
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 55/134 (41%), Gaps = 7/134 (5%)
Query: 193 ASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVW 252
A+E W G G N QLG G +P V L + V FH+ +S+ G+V+
Sbjct: 152 ATEVFSW--GNGANYQLGTGNQHVQKVPGRVDSL-HGCFIKLVSAAKFHSVAISTHGEVY 208
Query: 253 SWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKVVCGAAHTVVVGQEGY 312
+WG +G L S + PR + + K V A H V+ EG
Sbjct: 209 TWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRV----KAVAAAKHHTVIATEGG 264
Query: 313 KVWAWGRGRSGVLG 326
V+ WG R G LG
Sbjct: 265 DVYTWGSNREGQLG 278
>AT3G03790.1 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-967857 FORWARD LENGTH=1078
Length = 1078
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 101/261 (38%), Gaps = 56/261 (21%)
Query: 74 LWMWGNCPQESKEGALSFETSFIPAPVWDFHGRVVVKVSCGNEHVVALVSATESYNGEDL 133
++ WGN + G + +P V HG + VS H VA+ S +GE
Sbjct: 152 VFSWGNGAN-YQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAI-----STHGE-- 203
Query: 134 VCYSWGHNNHGQLGVGDRESRLHPEVVKTFDEESPWA----------------IYELACG 177
Y+WG G+LG HPE FD S A + +A
Sbjct: 204 -VYTWGFGRGGRLG--------HPE----FDIHSGQAAVITPRQVISGLGSRRVKAVAAA 250
Query: 178 AFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDC 237
HT + T + +T+G GQLG+ + + P V L +V V
Sbjct: 251 KHHTVIATEGGD--------VYTWGSNREGQLGYTSVDTQATPRKVTSL--KAKIVAVSA 300
Query: 238 GLFHTSVVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKV 297
HT+VVS G+V++WG K L S+S +PRL+ K +
Sbjct: 301 ANKHTAVVSDCGEVFTWGCNKEGQL----GYGTSNSASNYSPRLVDYL----KGKVFTAI 352
Query: 298 VCGAAHTVVVGQEGYKVWAWG 318
HT+V+ +G +V+ WG
Sbjct: 353 ASSKYHTLVLRNDG-EVYTWG 372
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 55/134 (41%), Gaps = 7/134 (5%)
Query: 193 ASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVW 252
+SE W G G N QLG G +P V L + V FH+ +S+ G+V+
Sbjct: 149 SSEVFSW--GNGANYQLGTGNQHVQKVPGRVDSL-HGCFIKLVSAAKFHSVAISTHGEVY 205
Query: 253 SWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKVVCGAAHTVVVGQEGY 312
+WG +G L S + PR + + K V A H V+ EG
Sbjct: 206 TWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRV----KAVAAAKHHTVIATEGG 261
Query: 313 KVWAWGRGRSGVLG 326
V+ WG R G LG
Sbjct: 262 DVYTWGSNREGQLG 275
>AT3G03790.3 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-968011 FORWARD LENGTH=1099
Length = 1099
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 93/239 (38%), Gaps = 55/239 (23%)
Query: 96 IPAPVWDFHGRVVVKVSCGNEHVVALVSATESYNGEDLVCYSWGHNNHGQLGVGDRESRL 155
+P V HG + VS H VA+ S +GE Y+WG G+LG
Sbjct: 176 VPGRVDSLHGCFIKLVSAAKFHSVAI-----STHGE---VYTWGFGRGGRLG-------- 219
Query: 156 HPEVVKTFDEESPWA----------------IYELACGAFHTALLTRKKNPDDASESICW 199
HPE FD S A + +A HT + T + +
Sbjct: 220 HPE----FDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGD--------VY 267
Query: 200 TFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVWSWGMQKG 259
T+G GQLG+ + + P V L +V V HT+VVS G+V++WG K
Sbjct: 268 TWGSNREGQLGYTSVDTQATPRKVTSL--KAKIVAVSAANKHTAVVSDCGEVFTWGCNKE 325
Query: 260 LGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWG 318
L S+S +PRL+ K + HT+V+ +G +V+ WG
Sbjct: 326 GQL----GYGTSNSASNYSPRLVDYL----KGKVFTAIASSKYHTLVLRNDG-EVYTWG 375
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 55/134 (41%), Gaps = 7/134 (5%)
Query: 193 ASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVDCGLFHTSVVSSAGDVW 252
A+E W G G N QLG G +P V L + V FH+ +S+ G+V+
Sbjct: 152 ATEVFSW--GNGANYQLGTGNQHVQKVPGRVDSL-HGCFIKLVSAAKFHSVAISTHGEVY 208
Query: 253 SWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKVVCGAAHTVVVGQEGY 312
+WG +G L S + PR + + K V A H V+ EG
Sbjct: 209 TWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRV----KAVAAAKHHTVIATEGG 264
Query: 313 KVWAWGRGRSGVLG 326
V+ WG R G LG
Sbjct: 265 DVYTWGSNREGQLG 278