Miyakogusa Predicted Gene

Lj1g3v2063260.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2063260.1 Non Chatacterized Hit- tr|I1JUT6|I1JUT6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49649
PE,65.16,0,seg,NULL,CUFF.28361.1
         (1184 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G11530.1 | Symbols: EMF1 | embryonic flower 1 (EMF1) | chr5:3...   148   3e-35

>AT5G11530.1 | Symbols: EMF1 | embryonic flower 1 (EMF1) |
            chr5:3697140-3700930 FORWARD LENGTH=1096
          Length = 1096

 Score =  148 bits (373), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 202/793 (25%), Positives = 325/793 (40%), Gaps = 143/793 (18%)

Query: 437  ERSHIMGKKKNKKILVVDNYLTPEPQQGQQRENEGTMD-TADKAYASKTVSSRIAPRVLT 495
            +R+   GK++N++  VVD ++   P +  Q   EG  +  AD +  S    S     + T
Sbjct: 340  DRTPFKGKQRNRRFQVVDEFVPSLPCETSQ---EGIKEHDADPSKRSTPAHS-----LFT 391

Query: 496  GKRMDTFPSHALRIENELNLSKEKGKKLQTD----FLSSQKNGMLVGHTFAHSGKNIRSS 551
            G      P    R E +L+L K+K KK   D     + S  NG+      +H+G ++ + 
Sbjct: 392  GNDSVPCPPGTQRTERKLSLPKKKTKKPVIDNGKSTVISFSNGIDGSQVNSHTGPSMNT- 450

Query: 552  MPVDIPIPSVQGVMNGKGLGEGPHLSLDSYLIAN-YNKKCIHQTENRFPFSLPFQEGTSK 610
                  +   + ++NGK +G       D+ L ++ Y +K + Q  ++   SL  Q+    
Sbjct: 451  ------VSQTRDLLNGKRVGG----LFDNRLASDGYFRKYLSQVNDKPITSLHLQDN--- 497

Query: 611  VPQFIR-KDNETNVFRG----------------------------------PSIPSRHTP 635
               ++R +D E N  R                                    ++  R+ P
Sbjct: 498  --DYVRSRDAEPNCLRDFSSSSKSSSGGWLRTGVDIVDFRNNNHNTNRSSFSNLKLRYPP 555

Query: 636  NSISGKGIHF---EEMTGAGNREKTVEAAEQLGVMKRYG-ERKAEVSEQGTVDDIPMEIV 691
            +S     +     ++ +GA  + KTV   E  G  +    +RK   +E+   DDIPMEIV
Sbjct: 556  SSTEVADLSRVLQKDASGADRKGKTVMVQEHHGAPRSQSHDRKETTTEEQNNDDIPMEIV 615

Query: 692  ELLAKNQYERCLPDVENSCSTLEKSSVRRKSQMTAGTTGYGKGEMSFSKECQKEKPQGRP 751
            EL+AKNQYERCLPD E      E  S ++ SQ TA      K + +   +  +    G  
Sbjct: 616  ELMAKNQYERCLPDKE------EDVSNKQPSQETA-----HKSKNALLIDLNETYDNGIS 664

Query: 752  KKSNIITRGENVKPSKRNSAHHFPSFDGNNSGVNNLYPPQSPYGFEVSQSQKRPSSGFQF 811
             + N  +R      S      HFP   G     ++ +P   PY          PS    F
Sbjct: 665  LEDNNTSRPPKPCSSNARREEHFPM--GRQQNSHDFFPISQPY---------VPSPFGIF 713

Query: 812  SP-----VSSQLGSAKKCKFSGSLE---ERAPSNAAWQGLGGCSLHKNILLQQNE----- 858
             P      SS   S   C++ G+L     + PS ++++ L  C   +++  Q  E     
Sbjct: 714  PPTQENRASSIRFSGHNCQWLGNLPTVGNQNPSPSSFRVLRACDTCQSVPNQYREASHPI 773

Query: 859  WASLTSNHVSIGHVPQKVVSQPTNSNMDIASLRSGLLHKQNMKRDIDLNYININAAGLEK 918
            W S          +P +   +P + N++ ++    L    N +   +LN++  N  G +K
Sbjct: 774  WPS--------SMIPPQSQYKPVSLNINQSTNPGTLSQASNNENTWNLNFVAAN--GKQK 823

Query: 919  HSRNAGTGTFSRMNGEYTFPCKHNGMEPHQNSRGSLDFYSNETIPAMHLLSLMDAGMQTR 978
               N           E++F CKH       +SR   +F S  +IPA+HLLSL+D  +++ 
Sbjct: 824  CGPNP----------EFSFGCKHAAGVSSSSSRPIDNFSSESSIPALHLLSLLDPRLRST 873

Query: 979  TPFNVGASAQMLKRPSYPGDCN---TKLEIG-TSKAHDTLKRPPPDYYSRSYLSDKPHGC 1034
            TP +   + +  KR   P + +    +L+ G +SK+  + K+ P D YS+ +  +     
Sbjct: 874  TPADQHGNTKFTKRHFPPANQSKEFIELQTGDSSKSAYSTKQIPFDLYSKRFTQEPSRKS 933

Query: 1035 FIGSPTFGAS------ASTQPD--------KNLIGATGFNGENSTKLGKKEKMKSSNSTL 1080
            F  +P  G S      AS  P         K+         E        ++ K      
Sbjct: 934  FPITPPIGTSSLSFQNASWSPHHQEKKTKRKDTFAPVYNTHEKPVFASSNDQAKFQLLGA 993

Query: 1081 QNVVSKPFSLPRLEMETSLQHKLDAHGTQETPVPLNVISGN-SCMVNRNPADFTTPETGN 1139
             N +  P      + E   + K ++     +  P+   SG   C VNRNPADFT PE GN
Sbjct: 994  SNSMMLPLKFHMTDKEKKQKRKAESCNNNASAGPVKNSSGPIVCSVNRNPADFTIPEPGN 1053

Query: 1140 VYMIRGEDLKFEK 1152
            VYM+ GE LK  K
Sbjct: 1054 VYMLTGEHLKVRK 1066



 Score = 63.9 bits (154), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 1  MGSYIPIKSITIDLSDSINKRDENCKCEHFSIRGYVAEMRKKDWKLCWPFP----VLDSD 56
          MGS I I SI+IDL+ + N+ D   KC+HFS+RG+VAE R++D + CWPF      L   
Sbjct: 1  MGSSIKINSISIDLAGAANEIDM-VKCDHFSMRGFVAETRERDLRKCWPFSEESVSLVDQ 59

Query: 57 KPPILPPLEVRKFKCWRCPDVLQEV 81
          +   LP L V KF+ W C   ++++
Sbjct: 60 QSYTLPTLSVPKFRWWHCMSCIKDI 84