Miyakogusa Predicted Gene

Lj1g3v2050880.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2050880.1 Non Chatacterized Hit- tr|K0KNU6|K0KNU6_9ASCO
Uncharacterized protein OS=Wickerhamomyces ciferrii
PE,39.89,2e-18,Domain in the RNA-binding Lupus La protein;,RNA-binding
protein Lupus La; RNA recognition motif,RNA ,CUFF.28610.1
         (452 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G32720.1 | Symbols: AtLa1, La1 | La protein 1 | chr4:15787313...   404   e-113
AT4G32720.2 | Symbols: AtLa1, La1 | La protein 1 | chr4:15787313...   403   e-112
AT1G79880.1 | Symbols:  | RNA recognition motif (RRM)-containing...   291   8e-79
AT1G79880.2 | Symbols:  | RNA recognition motif (RRM)-containing...   219   3e-57
AT1G79880.3 | Symbols:  | RNA recognition motif (RRM)-containing...   219   4e-57
AT2G43970.2 | Symbols:  | RNA-binding protein | chr2:18205535-18...    77   2e-14
AT2G43970.1 | Symbols:  | RNA-binding protein | chr2:18205535-18...    77   2e-14
AT5G46250.1 | Symbols:  | RNA-binding protein | chr5:18755388-18...    70   4e-12
AT5G46250.2 | Symbols:  | RNA-binding protein | chr5:18755388-18...    69   5e-12
AT5G46250.3 | Symbols:  | RNA-binding protein | chr5:18755388-18...    69   6e-12
AT3G19090.1 | Symbols:  | RNA-binding protein | chr3:6601466-660...    57   4e-08

>AT4G32720.1 | Symbols: AtLa1, La1 | La protein 1 |
           chr4:15787313-15789683 FORWARD LENGTH=433
          Length = 433

 Score =  404 bits (1037), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/409 (51%), Positives = 279/409 (68%), Gaps = 25/409 (6%)

Query: 1   MATPTTLNEETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQH 60
           M+ P  L EET K V+RQVEFYFSDSNLP D+F++KTV+ESEDG+VSLAL+CSF++MR +
Sbjct: 1   MSIPC-LTEETAKTVLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGY 59

Query: 61  LNLGDVKAEDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIA 120
           L LGD K +D+ EDT+KAVA  LR S++LK+S+DGKKVGR+TEL K E++IEQ++ RT+A
Sbjct: 60  LKLGDSKGDDIPEDTIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVA 119

Query: 121 ASPFQYDLKLEDVETFFSQYAKVNSVRLPRHVGDKKFFCGTALIEFSSXXXXXXXXXXXX 180
           ASPF YD+K EDVE+FFSQY KVNSVR+PRHV + + F G AL+EF +            
Sbjct: 120 ASPFSYDVKREDVESFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDAQNVMKQNL 179

Query: 181 XYAGAELELKPKKDFDAERQKELEEYEKSHPS-------TGSNHQNNSDADEYYPKGLII 233
            +AG ELELKPKK+FD ER+K+  ++    P         GS+H+NNS  +  YPKGLII
Sbjct: 180 VFAGQELELKPKKEFDNEREKDEVKFANYQPQKGSANQKNGSDHKNNSAYEPDYPKGLII 239

Query: 234 AFKLKSISDEVPSEQNGVDQQANDNAVVSKTDEKIPSEITSEKXXXXXXXXXXXXXXXXX 293
           +F LK  ++E  +EQ   ++               P++ T E+                 
Sbjct: 240 SFTLKRSAEEGTTEQKSSEE---------------PTDKTMEESETKPADTPDADKENTG 284

Query: 294 XXXXXXTQDEEKNPKADEKLSAAACKDNMDVVLREDLKRVFEKFGAVKYIDFTMGADSGF 353
                  +DE+   +    L  A  KDN DVVLREDLK VF KFG VK++DF MG+++G+
Sbjct: 285 EVQAEGAEDEDDEKEEKGAL--ATHKDNKDVVLREDLKAVFGKFGDVKFVDFKMGSETGY 342

Query: 354 IRFEESEAAQKSRAAAVLSEKGGLVVKNYIAMLDPVTGEAEKEYWSLLR 402
           +RF+E EA+QK+RAAAVL+ +GGL VKN+IA+L+PV GEAEKEYW+LLR
Sbjct: 343 LRFDEPEASQKARAAAVLANEGGLAVKNFIAVLEPVIGEAEKEYWTLLR 391


>AT4G32720.2 | Symbols: AtLa1, La1 | La protein 1 |
           chr4:15787313-15789498 FORWARD LENGTH=404
          Length = 404

 Score =  403 bits (1035), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 211/409 (51%), Positives = 279/409 (68%), Gaps = 25/409 (6%)

Query: 1   MATPTTLNEETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQH 60
           M+ P  L EET K V+RQVEFYFSDSNLP D+F++KTV+ESEDG+VSLAL+CSF++MR +
Sbjct: 1   MSIPC-LTEETAKTVLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGY 59

Query: 61  LNLGDVKAEDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIA 120
           L LGD K +D+ EDT+KAVA  LR S++LK+S+DGKKVGR+TEL K E++IEQ++ RT+A
Sbjct: 60  LKLGDSKGDDIPEDTIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVA 119

Query: 121 ASPFQYDLKLEDVETFFSQYAKVNSVRLPRHVGDKKFFCGTALIEFSSXXXXXXXXXXXX 180
           ASPF YD+K EDVE+FFSQY KVNSVR+PRHV + + F G AL+EF +            
Sbjct: 120 ASPFSYDVKREDVESFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDAQNVMKQNL 179

Query: 181 XYAGAELELKPKKDFDAERQKELEEYEKSHPS-------TGSNHQNNSDADEYYPKGLII 233
            +AG ELELKPKK+FD ER+K+  ++    P         GS+H+NNS  +  YPKGLII
Sbjct: 180 VFAGQELELKPKKEFDNEREKDEVKFANYQPQKGSANQKNGSDHKNNSAYEPDYPKGLII 239

Query: 234 AFKLKSISDEVPSEQNGVDQQANDNAVVSKTDEKIPSEITSEKXXXXXXXXXXXXXXXXX 293
           +F LK  ++E  +EQ   ++               P++ T E+                 
Sbjct: 240 SFTLKRSAEEGTTEQKSSEE---------------PTDKTMEESETKPADTPDADKENTG 284

Query: 294 XXXXXXTQDEEKNPKADEKLSAAACKDNMDVVLREDLKRVFEKFGAVKYIDFTMGADSGF 353
                  +DE+   +    L  A  KDN DVVLREDLK VF KFG VK++DF MG+++G+
Sbjct: 285 EVQAEGAEDEDDEKEEKGAL--ATHKDNKDVVLREDLKAVFGKFGDVKFVDFKMGSETGY 342

Query: 354 IRFEESEAAQKSRAAAVLSEKGGLVVKNYIAMLDPVTGEAEKEYWSLLR 402
           +RF+E EA+QK+RAAAVL+ +GGL VKN+IA+L+PV GEAEKEYW+LLR
Sbjct: 343 LRFDEPEASQKARAAAVLANEGGLAVKNFIAVLEPVIGEAEKEYWTLLR 391


>AT1G79880.1 | Symbols:  | RNA recognition motif (RRM)-containing
           protein | chr1:30046222-30048336 REVERSE LENGTH=399
          Length = 399

 Score =  291 bits (744), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 169/409 (41%), Positives = 241/409 (58%), Gaps = 59/409 (14%)

Query: 5   TTLNEETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQHLNLG 64
           ++ NEET KK++ QVEFYFSDSNLP D F+ + V++S+DG+VSL L+CSF+RMR  L LG
Sbjct: 3   SSFNEETAKKLLTQVEFYFSDSNLPTDGFLNREVTKSKDGLVSLPLVCSFSRMRNLLGLG 62

Query: 65  DVKAEDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIAASPF 124
           ++  ED+    V+ VA++LR S  LKVS +G+++GR T+L K EEV+EQV  RT+AASPF
Sbjct: 63  NINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHRRTLAASPF 122

Query: 125 QYDLKLEDVETFFSQYAKVNSVRLPRHVGDKKFFCGTALIEFSSXXXXXXXXXXXXXYAG 184
           +Y +K+EDV +FFSQYAKVNSVRLP ++ DK+ FCGTAL+EFSS             YAG
Sbjct: 123 EYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDILRQSLVYAG 182

Query: 185 AELELKPKKDFDAERQKELEEYEKSHPSTGSNHQNNSDADEYYPKGLIIAFKLKSISDEV 244
           A+L L PK DFD +R+  +++  K            S++   + +G I+ F LK I+ E 
Sbjct: 183 ADLVLIPKSDFDCQRENMIKQLGK------------SESHNEFRRGQIVKFALKWIASE- 229

Query: 245 PSEQNGVDQQANDNAVVSKTDEKIPSEITSEKXXXXXXXXXXXXXXXXXXXXXXXTQDEE 304
                 V  +   +A+ +K  EK   E                              D E
Sbjct: 230 ----EKVTNKEKPSALKNKIKEKEDKE--------------------------TGIADRE 259

Query: 305 KNPKADEKLSAAACKDNMDVVL-----------REDLKRVFEKFGAVKYIDFTMGADSGF 353
           K  +  +   A+ CKDN D ++            E LK +F++FG+V++I+++ G DSG+
Sbjct: 260 K--ENGDNSCASLCKDNTDQLVVPPWNNSNSVSSEVLKDLFQRFGSVEHIEYSGGLDSGY 317

Query: 354 IRFEESEAAQKSRAAAVLSEKGGLVVKNYIAM-LDPVTGEAEKEYWSLL 401
           + F +SE A K+RAA      GGLVVKN  ++ L+ + GE E+E W  L
Sbjct: 318 VWFTDSETAMKARAAVEFV--GGLVVKNNFSVALEAINGEMERELWKRL 364


>AT1G79880.2 | Symbols:  | RNA recognition motif (RRM)-containing
           protein | chr1:30046222-30048014 REVERSE LENGTH=345
          Length = 345

 Score =  219 bits (559), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 137/357 (38%), Positives = 197/357 (55%), Gaps = 59/357 (16%)

Query: 57  MRQHLNLGDVKAEDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDI 116
           MR  L LG++  ED+    V+ VA++LR S  LKVS +G+++GR T+L K EEV+EQV  
Sbjct: 1   MRNLLGLGNINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHR 60

Query: 117 RTIAASPFQYDLKLEDVETFFSQYAKVNSVRLPRHVGDKKFFCGTALIEFSSXXXXXXXX 176
           RT+AASPF+Y +K+EDV +FFSQYAKVNSVRLP ++ DK+ FCGTAL+EFSS        
Sbjct: 61  RTLAASPFEYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDIL 120

Query: 177 XXXXXYAGAELELKPKKDFDAERQKELEEYEKSHPSTGSNHQNNSDADEYYPKGLIIAFK 236
                YAGA+L L PK DFD +R+  +++  K            S++   + +G I+ F 
Sbjct: 121 RQSLVYAGADLVLIPKSDFDCQRENMIKQLGK------------SESHNEFRRGQIVKFA 168

Query: 237 LKSISDEVPSEQNGVDQQANDNAVVSKTDEKIPSEITSEKXXXXXXXXXXXXXXXXXXXX 296
           LK I+ E       V  +   +A+ +K  EK   E                         
Sbjct: 169 LKWIASE-----EKVTNKEKPSALKNKIKEKEDKE------------------------- 198

Query: 297 XXXTQDEEKNPKADEKLSAAACKDNMDVVL-----------REDLKRVFEKFGAVKYIDF 345
                D EK  +  +   A+ CKDN D ++            E LK +F++FG+V++I++
Sbjct: 199 -TGIADREK--ENGDNSCASLCKDNTDQLVVPPWNNSNSVSSEVLKDLFQRFGSVEHIEY 255

Query: 346 TMGADSGFIRFEESEAAQKSRAAAVLSEKGGLVVKNYIAM-LDPVTGEAEKEYWSLL 401
           + G DSG++ F +SE A K+RAA      GGLVVKN  ++ L+ + GE E+E W  L
Sbjct: 256 SGGLDSGYVWFTDSETAMKARAAVEFV--GGLVVKNNFSVALEAINGEMERELWKRL 310


>AT1G79880.3 | Symbols:  | RNA recognition motif (RRM)-containing
           protein | chr1:30046222-30048014 REVERSE LENGTH=357
          Length = 357

 Score =  219 bits (557), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/357 (38%), Positives = 197/357 (55%), Gaps = 59/357 (16%)

Query: 57  MRQHLNLGDVKAEDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDI 116
           MR  L LG++  ED+    V+ VA++LR S  LKVS +G+++GR T+L K EEV+EQV  
Sbjct: 1   MRNLLGLGNINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHR 60

Query: 117 RTIAASPFQYDLKLEDVETFFSQYAKVNSVRLPRHVGDKKFFCGTALIEFSSXXXXXXXX 176
           RT+AASPF+Y +K+EDV +FFSQYAKVNSVRLP ++ DK+ FCGTAL+EFSS        
Sbjct: 61  RTLAASPFEYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDIL 120

Query: 177 XXXXXYAGAELELKPKKDFDAERQKELEEYEKSHPSTGSNHQNNSDADEYYPKGLIIAFK 236
                YAGA+L L PK DFD +R+  +++  K            S++   + +G I+ F 
Sbjct: 121 RQSLVYAGADLVLIPKSDFDCQRENMIKQLGK------------SESHNEFRRGQIVKFA 168

Query: 237 LKSISDEVPSEQNGVDQQANDNAVVSKTDEKIPSEITSEKXXXXXXXXXXXXXXXXXXXX 296
           LK I+ E       V  +   +A+ +K  EK   E                         
Sbjct: 169 LKWIASE-----EKVTNKEKPSALKNKIKEKEDKE------------------------- 198

Query: 297 XXXTQDEEKNPKADEKLSAAACKDNMDVVL-----------REDLKRVFEKFGAVKYIDF 345
                D EK  +  +   A+ CKDN D ++            E LK +F++FG+V++I++
Sbjct: 199 -TGIADREK--ENGDNSCASLCKDNTDQLVVPPWNNSNSVSSEVLKDLFQRFGSVEHIEY 255

Query: 346 TMGADSGFIRFEESEAAQKSRAAAVLSEKGGLVVKNYIAM-LDPVTGEAEKEYWSLL 401
           + G DSG++ F +SE A K+RAA      GGLVVKN  ++ L+ + GE E+E W  L
Sbjct: 256 SGGLDSGYVWFTDSETAMKARAAVEFV--GGLVVKNNFSVALEAINGEMERELWKRL 310


>AT2G43970.2 | Symbols:  | RNA-binding protein |
           chr2:18205535-18208031 REVERSE LENGTH=529
          Length = 529

 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 14/143 (9%)

Query: 5   TTLNEETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQHLNLG 64
           T L E++ +K++ QVE+YFSD NL   + + + + +  +G V + ++ SF +++  +N  
Sbjct: 187 TGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVIN-- 244

Query: 65  DVKAEDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIAASPF 124
                         +A VL+NSA L VSEDGKKV R +  P TE  IE++  R I A   
Sbjct: 245 ----------NNSQLAAVLQNSAKLFVSEDGKKVRRIS--PITESAIEELQSRIIVAENL 292

Query: 125 QYDLKLEDVETFFSQYAKVNSVR 147
             D   +++   FS    V ++R
Sbjct: 293 PEDHCYQNLMKIFSTVGSVKNIR 315


>AT2G43970.1 | Symbols:  | RNA-binding protein |
           chr2:18205535-18208031 REVERSE LENGTH=545
          Length = 545

 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 14/143 (9%)

Query: 5   TTLNEETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQHLNLG 64
           T L E++ +K++ QVE+YFSD NL   + + + + +  +G V + ++ SF +++  +N  
Sbjct: 187 TGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVIN-- 244

Query: 65  DVKAEDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIAASPF 124
                         +A VL+NSA L VSEDGKKV R +  P TE  IE++  R I A   
Sbjct: 245 ----------NNSQLAAVLQNSAKLFVSEDGKKVRRIS--PITESAIEELQSRIIVAENL 292

Query: 125 QYDLKLEDVETFFSQYAKVNSVR 147
             D   +++   FS    V ++R
Sbjct: 293 PEDHCYQNLMKIFSTVGSVKNIR 315


>AT5G46250.1 | Symbols:  | RNA-binding protein |
           chr5:18755388-18758056 FORWARD LENGTH=422
          Length = 422

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 24/166 (14%)

Query: 9   EETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQHLNLGDVKA 68
           +E  +K+IRQVE+YFSD NLP D F+   +  ++ G V ++ + +F++M++         
Sbjct: 101 DELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKK--------- 151

Query: 69  EDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIAASPFQYDL 128
             +T D    V+  L+ S+ L VS D KKV R + LP+    I    I T+       D 
Sbjct: 152 --LTRDHALIVS-ALKESSFLVVSADEKKVKRLSPLPE----IRDPKIFTVLVENLPEDH 204

Query: 129 KLEDVETFFSQYAKVNSVRL--PRHV------GDKKFFCGTALIEF 166
             E++   F +   + SV +  P  V      G K+ F  T L  F
Sbjct: 205 SNENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAF 250


>AT5G46250.2 | Symbols:  | RNA-binding protein |
           chr5:18755388-18757723 FORWARD LENGTH=340
          Length = 340

 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 24/166 (14%)

Query: 9   EETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQHLNLGDVKA 68
           +E  +K+IRQVE+YFSD NLP D F+   +  ++ G V ++ + +F++M++         
Sbjct: 101 DELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKK--------- 151

Query: 69  EDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIAASPFQYDL 128
             +T D    V+  L+ S+ L VS D KKV R + LP+    I    I T+       D 
Sbjct: 152 --LTRDHALIVS-ALKESSFLVVSADEKKVKRLSPLPE----IRDPKIFTVLVENLPEDH 204

Query: 129 KLEDVETFFSQYAKVNSVRL--PRHV------GDKKFFCGTALIEF 166
             E++   F +   + SV +  P  V      G K+ F  T L  F
Sbjct: 205 SNENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAF 250


>AT5G46250.3 | Symbols:  | RNA-binding protein |
           chr5:18755388-18757723 FORWARD LENGTH=340
          Length = 340

 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 24/166 (14%)

Query: 9   EETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQHLNLGDVKA 68
           +E  +K+IRQVE+YFSD NLP D F+   +  ++ G V ++ + +F++M++         
Sbjct: 101 DELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKK--------- 151

Query: 69  EDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIAASPFQYDL 128
             +T D    V+  L+ S+ L VS D KKV R + LP+    I    I T+       D 
Sbjct: 152 --LTRDHALIVS-ALKESSFLVVSADEKKVKRLSPLPE----IRDPKIFTVLVENLPEDH 204

Query: 129 KLEDVETFFSQYAKVNSVRL--PRHV------GDKKFFCGTALIEF 166
             E++   F +   + SV +  P  V      G K+ F  T L  F
Sbjct: 205 SNENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAF 250


>AT3G19090.1 | Symbols:  | RNA-binding protein |
           chr3:6601466-6603709 FORWARD LENGTH=455
          Length = 455

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 24/140 (17%)

Query: 14  KVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMR-----QHLNLGDVKA 68
           K+++QVE+ F+D +L  +  + K +S+  +G V ++ + S  +++      HL       
Sbjct: 147 KIVKQVEYQFTDMSLLANESISKHISKDPEGYVPVSYIASTKKIKALTSNHHL------- 199

Query: 69  EDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIAASPFQYDL 128
                     V+  LR+S+ L VSEDGKKV RT++   T+   E++  RT+ A     D 
Sbjct: 200 ----------VSLALRSSSKLVVSEDGKKVKRTSQF--TDRDREELQGRTVVAENLPDDH 247

Query: 129 KLEDVETFFSQYAKVNSVRL 148
             +++E  F     V ++R+
Sbjct: 248 SYQNLEKIFGVVGNVKAIRI 267