Miyakogusa Predicted Gene
- Lj1g3v2036740.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2036740.2 Non Chatacterized Hit- tr|I1JUR7|I1JUR7_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,91.91,0,Adaptin_N,Clathrin/coatomer adaptor, adaptin-like,
N-terminal; B2-adapt-app_C,Beta-adaptin appendage,CUFF.28338.2
(838 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G11490.1 | Symbols: | adaptin family protein | chr5:3671964-... 1318 0.0
AT5G11490.2 | Symbols: | adaptin family protein | chr5:3671964-... 1312 0.0
AT4G23460.1 | Symbols: | Adaptin family protein | chr4:12243899... 345 6e-95
AT4G11380.1 | Symbols: | Adaptin family protein | chr4:6920608-... 338 1e-92
AT4G11380.2 | Symbols: | Adaptin family protein | chr4:6920608-... 337 3e-92
AT3G55480.2 | Symbols: PAT2 | protein affected trafficking... 73 7e-13
AT3G55480.1 | Symbols: PAT2 | protein affected trafficking... 69 2e-11
>AT5G11490.1 | Symbols: | adaptin family protein |
chr5:3671964-3676144 FORWARD LENGTH=841
Length = 841
Score = 1318 bits (3411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 641/825 (77%), Positives = 709/825 (85%), Gaps = 4/825 (0%)
Query: 17 GKSEVSDLKLQLRQLAGSRAPGTDDLKRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDI 76
GKSEVSDLK QLRQLAGSRAPG DD KRDL+KKVIS MTIGIDVSS+FGEMVMCSATSDI
Sbjct: 18 GKSEVSDLKTQLRQLAGSRAPGVDDSKRDLYKKVISYMTIGIDVSSVFGEMVMCSATSDI 77
Query: 77 VLKKMCYLYVGNYAKGNPELALLTINFLQRDCKDMDPMIRGLALRSLCTLRVENLVEYLV 136
VLKKMCYLYVGNYAKGNP+L+LLTINFLQRDCKD DPMIRGLALRSLC+LRV NLVEYLV
Sbjct: 78 VLKKMCYLYVGNYAKGNPDLSLLTINFLQRDCKDEDPMIRGLALRSLCSLRVPNLVEYLV 137
Query: 137 GPLGSGLKDNNSYVRMVAVIGVLKLYHISASTCIDADFPATLKHLMLNDPDTQVVANCLS 196
GPLGSGLKDNNSYVR +AV GVLKLYHIS STCIDADFPATLK LML+D D QVVANCLS
Sbjct: 138 GPLGSGLKDNNSYVRTIAVTGVLKLYHISPSTCIDADFPATLKSLMLHDSDAQVVANCLS 197
Query: 197 ALQEIWTLXXXXXXXXXXXXXXVHSKPVIYYLLNRIKEFSEWSQCVVLELVAKYVPSDNS 256
ALQEIW+L + SKPVIYY LNRIKEF+EW+QC++LEL KYVPSD++
Sbjct: 198 ALQEIWSLEASHSEEACREKESLLSKPVIYYFLNRIKEFNEWAQCLILELAVKYVPSDSN 257
Query: 257 EIFDIMNLLEDRLQHANGAVVLATTKVFLHLTLSMADVHQQVYERIKAPLLTQVSSGSPE 316
+IFDIMNLLEDRLQHANGAVVLAT KVFL LTLSM DVHQQVYERIK+PLLT VSSGSPE
Sbjct: 258 DIFDIMNLLEDRLQHANGAVVLATVKVFLQLTLSMTDVHQQVYERIKSPLLTLVSSGSPE 317
Query: 317 QSYAILSHLHLLVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTE 376
QSYAILSHLHLLV+RAP+IF++DYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTE
Sbjct: 318 QSYAILSHLHLLVVRAPFIFAADYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTE 377
Query: 377 LCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLL 436
LCEYAANVDI IARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTAE LVLVKDLL
Sbjct: 378 LCEYAANVDIAIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTAETLVLVKDLL 437
Query: 437 RKYPQWSQDCIAVVGNISSKNVQEPKAKAALIWMLGEYSQDMNDAPYVLESLVENWDEEH 496
RKYPQWS DCI+VVG ISSKN+QEPKAKAALIWMLGEY+QDM+DAPYVLE+L+ENW+EEH
Sbjct: 438 RKYPQWSHDCISVVGGISSKNIQEPKAKAALIWMLGEYAQDMSDAPYVLENLIENWEEEH 497
Query: 497 SAEVRLHLLTAVMKCFFKRPPETQKXXXXXXXXXXXDFHQDVHDRALFYYRLLQYKVSVA 556
SAEVRLHLLTA MKCFFKR PETQK DFHQDVHDRALFYYR+LQY V VA
Sbjct: 498 SAEVRLHLLTAAMKCFFKRAPETQKALGTALAAGIADFHQDVHDRALFYYRVLQYDVHVA 557
Query: 557 ESVVNPPKQAVSVFADTQNSEVKDRIFDEFNSLSVVYQKPSYMFTDKEHRGILEFSDELG 616
E VV+PPKQAVSVFADTQ+SE+KDR+FDEFNSLSV+YQKPSYMFTDKEHRG EFSDE+G
Sbjct: 558 ERVVSPPKQAVSVFADTQSSEIKDRVFDEFNSLSVIYQKPSYMFTDKEHRGPFEFSDEVG 617
Query: 617 NLSISVESGDSVVPAQRVEENDKDLLLSTTEKDEVRD-PGSNGSAYNAPSYDAA--ISQP 673
N+SI+ E+ +VPAQ+ E NDKDLLL EKDE + +NGSAY APS +++ I+
Sbjct: 618 NISITPEASSDIVPAQQYEANDKDLLLGIDEKDENKGVSNNNGSAYTAPSLESSSNITSQ 677
Query: 674 LADLALPSTGLTGQAPASSLAIDDLLGLGFPVGTAATPSPPPLNLNPKAVLDPGTFQQKW 733
+ +LA+ + P S DDL GLG A TPSPP L LN +A LDPG FQQKW
Sbjct: 678 MQELAISGPATSATTP-QSFGFDDLFGLGLSTAPAPTPSPPLLKLNARAALDPGAFQQKW 736
Query: 734 RQLPISLSEEYSLSPQGIVSLTAPNALLRHMQSHSIQCIASGRQSPNFKFFFFAQKADEA 793
RQLPISL++E S++PQGI +LT P +L++HMQSHSI CIASG QSPNFKFFFFAQK E
Sbjct: 737 RQLPISLTQECSVNPQGIAALTVPQSLIKHMQSHSIHCIASGGQSPNFKFFFFAQKESEP 796
Query: 794 SVYLVECIINTSSGKSQINIKADDQSSSQAFSTLFQSALSKFGLP 838
S YL ECIINTSS K+QI +KAD+QS+ QAF+T+F++ALSKFG+P
Sbjct: 797 SNYLTECIINTSSAKAQIKVKADEQSTCQAFTTVFETALSKFGMP 841
>AT5G11490.2 | Symbols: | adaptin family protein |
chr5:3671964-3676263 FORWARD LENGTH=850
Length = 850
Score = 1312 bits (3396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/822 (77%), Positives = 706/822 (85%), Gaps = 4/822 (0%)
Query: 17 GKSEVSDLKLQLRQLAGSRAPGTDDLKRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDI 76
GKSEVSDLK QLRQLAGSRAPG DD KRDL+KKVIS MTIGIDVSS+FGEMVMCSATSDI
Sbjct: 18 GKSEVSDLKTQLRQLAGSRAPGVDDSKRDLYKKVISYMTIGIDVSSVFGEMVMCSATSDI 77
Query: 77 VLKKMCYLYVGNYAKGNPELALLTINFLQRDCKDMDPMIRGLALRSLCTLRVENLVEYLV 136
VLKKMCYLYVGNYAKGNP+L+LLTINFLQRDCKD DPMIRGLALRSLC+LRV NLVEYLV
Sbjct: 78 VLKKMCYLYVGNYAKGNPDLSLLTINFLQRDCKDEDPMIRGLALRSLCSLRVPNLVEYLV 137
Query: 137 GPLGSGLKDNNSYVRMVAVIGVLKLYHISASTCIDADFPATLKHLMLNDPDTQVVANCLS 196
GPLGSGLKDNNSYVR +AV GVLKLYHIS STCIDADFPATLK LML+D D QVVANCLS
Sbjct: 138 GPLGSGLKDNNSYVRTIAVTGVLKLYHISPSTCIDADFPATLKSLMLHDSDAQVVANCLS 197
Query: 197 ALQEIWTLXXXXXXXXXXXXXXVHSKPVIYYLLNRIKEFSEWSQCVVLELVAKYVPSDNS 256
ALQEIW+L + SKPVIYY LNRIKEF+EW+QC++LEL KYVPSD++
Sbjct: 198 ALQEIWSLEASHSEEACREKESLLSKPVIYYFLNRIKEFNEWAQCLILELAVKYVPSDSN 257
Query: 257 EIFDIMNLLEDRLQHANGAVVLATTKVFLHLTLSMADVHQQVYERIKAPLLTQVSSGSPE 316
+IFDIMNLLEDRLQHANGAVVLAT KVFL LTLSM DVHQQVYERIK+PLLT VSSGSPE
Sbjct: 258 DIFDIMNLLEDRLQHANGAVVLATVKVFLQLTLSMTDVHQQVYERIKSPLLTLVSSGSPE 317
Query: 317 QSYAILSHLHLLVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTE 376
QSYAILSHLHLLV+RAP+IF++DYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTE
Sbjct: 318 QSYAILSHLHLLVVRAPFIFAADYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTE 377
Query: 377 LCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLL 436
LCEYAANVDI IARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTAE LVLVKDLL
Sbjct: 378 LCEYAANVDIAIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTAETLVLVKDLL 437
Query: 437 RKYPQWSQDCIAVVGNISSKNVQEPKAKAALIWMLGEYSQDMNDAPYVLESLVENWDEEH 496
RKYPQWS DCI+VVG ISSKN+QEPKAKAALIWMLGEY+QDM+DAPYVLE+L+ENW+EEH
Sbjct: 438 RKYPQWSHDCISVVGGISSKNIQEPKAKAALIWMLGEYAQDMSDAPYVLENLIENWEEEH 497
Query: 497 SAEVRLHLLTAVMKCFFKRPPETQKXXXXXXXXXXXDFHQDVHDRALFYYRLLQYKVSVA 556
SAEVRLHLLTA MKCFFKR PETQK DFHQDVHDRALFYYR+LQY V VA
Sbjct: 498 SAEVRLHLLTAAMKCFFKRAPETQKALGTALAAGIADFHQDVHDRALFYYRVLQYDVHVA 557
Query: 557 ESVVNPPKQAVSVFADTQNSEVKDRIFDEFNSLSVVYQKPSYMFTDKEHRGILEFSDELG 616
E VV+PPKQAVSVFADTQ+SE+KDR+FDEFNSLSV+YQKPSYMFTDKEHRG EFSDE+G
Sbjct: 558 ERVVSPPKQAVSVFADTQSSEIKDRVFDEFNSLSVIYQKPSYMFTDKEHRGPFEFSDEVG 617
Query: 617 NLSISVESGDSVVPAQRVEENDKDLLLSTTEKDEVRD-PGSNGSAYNAPSYDAA--ISQP 673
N+SI+ E+ +VPAQ+ E NDKDLLL EKDE + +NGSAY APS +++ I+
Sbjct: 618 NISITPEASSDIVPAQQYEANDKDLLLGIDEKDENKGVSNNNGSAYTAPSLESSSNITSQ 677
Query: 674 LADLALPSTGLTGQAPASSLAIDDLLGLGFPVGTAATPSPPPLNLNPKAVLDPGTFQQKW 733
+ +LA+ + P S DDL GLG A TPSPP L LN +A LDPG FQQKW
Sbjct: 678 MQELAISGPATSATTP-QSFGFDDLFGLGLSTAPAPTPSPPLLKLNARAALDPGAFQQKW 736
Query: 734 RQLPISLSEEYSLSPQGIVSLTAPNALLRHMQSHSIQCIASGRQSPNFKFFFFAQKADEA 793
RQLPISL++E S++PQGI +LT P +L++HMQSHSI CIASG QSPNFKFFFFAQK E
Sbjct: 737 RQLPISLTQECSVNPQGIAALTVPQSLIKHMQSHSIHCIASGGQSPNFKFFFFAQKESEP 796
Query: 794 SVYLVECIINTSSGKSQINIKADDQSSSQAFSTLFQSALSKF 835
S YL ECIINTSS K+QI +KAD+QS+ QAF+T+F++ALSKF
Sbjct: 797 SNYLTECIINTSSAKAQIKVKADEQSTCQAFTTVFETALSKF 838
>AT4G23460.1 | Symbols: | Adaptin family protein |
chr4:12243899-12248898 REVERSE LENGTH=893
Length = 893
Score = 345 bits (886), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 207/612 (33%), Positives = 343/612 (56%), Gaps = 44/612 (7%)
Query: 18 KSEVSDLKLQLRQLAGSRAPGTDDLKRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDIV 77
K E+ +LK +L D ++D KKVI+ MT+G DVSSLF ++V C T ++
Sbjct: 14 KGEIPELKEELNS-------QYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLE 66
Query: 78 LKKMCYLYVGNYAKGNPELALLTINFLQRDCKDMDPMIRGLALRSLCTLRVENLVEYLVG 137
LKK+ YLY+ NYAK P+LA+L +N +D +D +P+IR LA+R++ +RV+ + EYL
Sbjct: 67 LKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCD 126
Query: 138 PLGSGLKDNNSYVRMVAVIGVLKLYHISASTCIDADFPATLKHLML-NDP---------D 187
PL LKD++ YVR A I V KL+ I+A D F LK L+ N+P
Sbjct: 127 PLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRGFLEALKDLISDNNPMVVANAVAAL 186
Query: 188 TQVVANCLSALQEIWTLXXXXXXXXXXXXXXVHSKPVIYYLLNRIKEFSEWSQCVVLELV 247
++ N S + EI + ++ LL + E +EW Q +L+ +
Sbjct: 187 AEIQENSTSPIFEI-------------------NSTILTKLLTALNECTEWGQVFILDAL 227
Query: 248 AKYVPSDNSEIFDIMNLLEDRLQHANGAVVLATTKVFLHLT--LSMADVHQQVYERIKAP 305
++Y SD E +I+ + RLQHAN AVVL+ K+ L ++ DV + + +++ P
Sbjct: 228 SRYKASDPREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCKKMAPP 287
Query: 306 LLTQVSSGSPEQSYAILSHLHLLVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVA 365
L+T +S+ PE Y L +++L+V + P I + + K F+C+YN+P YVK KLE++ +A
Sbjct: 288 LVTLLSA-EPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLA 346
Query: 366 NESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYV 424
++ N +++ E EYA VD+ R+++RA+G+ A++ + + LL+ ++++ +YV
Sbjct: 347 SDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYV 406
Query: 425 TAEALVLVKDLLRKYPQWSQDCIAVVGNISSKNVQEPKAKAALIWMLGEYSQDMNDAPYV 484
EA++++KD+ R+YP + IA + S + EP+AKA++IW++GEY++ +++A +
Sbjct: 407 VQEAIIVIKDIFRRYPNTYESIIATLCE-SLDTLDEPEAKASMIWIIGEYAERIDNADEL 465
Query: 485 LESLVENWDEEHSAEVRLHLLTAVMKCFFKRPPE--TQKXXXXXXXXXXXDFHQDVHDRA 542
LES +EN+ EE A+V+L LLTA +K F K+P E Q + D+ DRA
Sbjct: 466 LESFLENFPEE-PAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRA 524
Query: 543 LFYYRLLQYKVSVAESVVNPPKQAVSVFADTQNSEVKDRIFDEFNSLSVVYQKPSYMFTD 602
Y+RLL A+ VV K ++ ++ + + D + ++LS VY KP F
Sbjct: 525 YIYWRLLSTDPEAAKDVVLAEKPVITDDSNQLDPSLLDELLANISTLSSVYHKPPEAFVT 584
Query: 603 KEHRGILEFSDE 614
+ + + DE
Sbjct: 585 RLKTTVQKTEDE 596
>AT4G11380.1 | Symbols: | Adaptin family protein |
chr4:6920608-6925444 FORWARD LENGTH=894
Length = 894
Score = 338 bits (866), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 208/612 (33%), Positives = 342/612 (55%), Gaps = 44/612 (7%)
Query: 18 KSEVSDLKLQLRQLAGSRAPGTDDLKRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDIV 77
K E+ +LK +L D ++D KKVI+ MT+G DVSSLF ++V C T ++
Sbjct: 14 KGEIPELKEELNS-------QYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLE 66
Query: 78 LKKMCYLYVGNYAKGNPELALLTINFLQRDCKDMDPMIRGLALRSLCTLRVENLVEYLVG 137
LKK+ YLY+ NYAK P+LA+L +N +D +D +P+IR LA+R++ +RV+ + EYL
Sbjct: 67 LKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCD 126
Query: 138 PLGSGLKDNNSYVRMVAVIGVLKLYHISASTCIDADFPATLKHLML-NDP---------D 187
PL LKD++ YVR A I V KL+ I+A D F LK L+ N+P
Sbjct: 127 PLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRGFLEALKDLISDNNPMVVANAVAAL 186
Query: 188 TQVVANCLSALQEIWTLXXXXXXXXXXXXXXVHSKPVIYYLLNRIKEFSEWSQCVVLELV 247
++ N S + EI + + LL + E +EW Q +L+ +
Sbjct: 187 AEIQENSSSPIFEI-------------------NSTTLTKLLTALNECTEWGQVFILDAL 227
Query: 248 AKYVPSDNSEIFDIMNLLEDRLQHANGAVVLATTKVFLHLT--LSMADVHQQVYERIKAP 305
+KY +D E +I+ + RLQHAN AVVL+ K+ L ++ DV + + +++ P
Sbjct: 228 SKYKAADPREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCKKMAPP 287
Query: 306 LLTQVSSGSPEQSYAILSHLHLLVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVA 365
L+T +S+ PE Y L +++L+V + P I + + K F+C+YN+P YVK KLE++ +A
Sbjct: 288 LVTLLSA-EPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLA 346
Query: 366 NESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYV 424
++ N +++ E EYA VD+ R+++RA+G+ A++ + + LL+ ++++ +YV
Sbjct: 347 SDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYV 406
Query: 425 TAEALVLVKDLLRKYPQWSQDCIAVVGNISSKNVQEPKAKAALIWMLGEYSQDMNDAPYV 484
EA++++KD+ R+YP + IA + S + EP+AKA++IW++GEY++ +++A +
Sbjct: 407 VQEAIIVIKDIFRRYPNTYESIIATLCE-SLDTLDEPEAKASMIWIIGEYAERIDNADEL 465
Query: 485 LESLVENWDEEHSAEVRLHLLTAVMKCFFKRPPE--TQKXXXXXXXXXXXDFHQDVHDRA 542
LES +EN+ EE A+V+L LLTA +K F K+P E Q + D+ DRA
Sbjct: 466 LESFLENFPEE-PAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRA 524
Query: 543 LFYYRLLQYKVSVAESVVNPPKQAVSVFADTQNSEVKDRIFDEFNSLSVVYQKPSYMFTD 602
Y+RLL A+ VV K +S ++ + + D + ++LS VY KP F
Sbjct: 525 YIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLTNISTLSSVYHKPPEAFVT 584
Query: 603 KEHRGILEFSDE 614
+ + + DE
Sbjct: 585 RLKTTVQKTEDE 596
>AT4G11380.2 | Symbols: | Adaptin family protein |
chr4:6920608-6925444 FORWARD LENGTH=916
Length = 916
Score = 337 bits (863), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 203/589 (34%), Positives = 334/589 (56%), Gaps = 37/589 (6%)
Query: 41 DLKRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKGNPELALLT 100
D ++D KKVI+ MT+G DVSSLF ++V C T ++ LKK+ YLY+ NYAK P+LA+L
Sbjct: 52 DKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILA 111
Query: 101 INFLQRDCKDMDPMIRGLALRSLCTLRVENLVEYLVGPLGSGLKDNNSYVRMVAVIGVLK 160
+N +D +D +P+IR LA+R++ +RV+ + EYL PL LKD++ YVR A I V K
Sbjct: 112 VNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQKCLKDDDPYVRKTAAICVAK 171
Query: 161 LYHISASTCIDADFPATLKHLML-NDP---------DTQVVANCLSALQEIWTLXXXXXX 210
L+ I+A D F LK L+ N+P ++ N S + EI
Sbjct: 172 LFDINAELVEDRGFLEALKDLISDNNPMVVANAVAALAEIQENSSSPIFEI--------- 222
Query: 211 XXXXXXXXVHSKPVIYYLLNRIKEFSEWSQCVVLELVAKYVPSDNSEIFDIMNLLEDRLQ 270
+ + LL + E +EW Q +L+ ++KY +D E +I+ + RLQ
Sbjct: 223 ----------NSTTLTKLLTALNECTEWGQVFILDALSKYKAADPREAENIVERVTPRLQ 272
Query: 271 HANGAVVLATTKVFLHLT--LSMADVHQQVYERIKAPLLTQVSSGSPEQSYAILSHLHLL 328
HAN AVVL+ K+ L ++ DV + + +++ PL+T +S+ PE Y L +++L+
Sbjct: 273 HANCAVVLSAVKMILQQMELITSTDVIRNLCKKMAPPLVTLLSA-EPEIQYVALRNINLI 331
Query: 329 VMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPI 388
V + P I + + K F+C+YN+P YVK KLE++ +A++ N +++ E EYA VD+
Sbjct: 332 VQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDF 391
Query: 389 ARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSQDCI 447
R+++RA+G+ A++ + + LL+ ++++ +YV EA++++KD+ R+YP + I
Sbjct: 392 VRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESII 451
Query: 448 AVVGNISSKNVQEPKAKAALIWMLGEYSQDMNDAPYVLESLVENWDEEHSAEVRLHLLTA 507
A + S + EP+AKA++IW++GEY++ +++A +LES +EN+ EE A+V+L LLTA
Sbjct: 452 ATLCE-SLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLENFPEE-PAQVQLQLLTA 509
Query: 508 VMKCFFKRPPE--TQKXXXXXXXXXXXDFHQDVHDRALFYYRLLQYKVSVAESVVNPPKQ 565
+K F K+P E Q + D+ DRA Y+RLL A+ VV K
Sbjct: 510 TVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKP 569
Query: 566 AVSVFADTQNSEVKDRIFDEFNSLSVVYQKPSYMFTDKEHRGILEFSDE 614
+S ++ + + D + ++LS VY KP F + + + DE
Sbjct: 570 VISDDSNQLDPSLLDELLTNISTLSSVYHKPPEAFVTRLKTTVQKTEDE 618
>AT3G55480.2 | Symbols: PAT2 | protein affected trafficking 2
| chr3:20566372-20571171 REVERSE LENGTH=1115
Length = 1115
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 69/122 (56%)
Query: 43 KRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKGNPELALLTIN 102
K + K++++ + G DVS+ F ++V A+ +KK+ YLY+ YA+ P ALL+IN
Sbjct: 49 KCEALKRLLALIAQGFDVSNFFPQVVKNVASQSSEVKKLVYLYLLQYAEKRPNEALLSIN 108
Query: 103 FLQRDCKDMDPMIRGLALRSLCTLRVENLVEYLVGPLGSGLKDNNSYVRMVAVIGVLKLY 162
+ Q+D D +P++R ALR++ +R+ + + + +D YVR A + KL+
Sbjct: 109 YFQKDLGDPNPLVRAWALRTMAGIRLHVIAPLALAAVSKCARDPAVYVRRCAANALPKLH 168
Query: 163 HI 164
+
Sbjct: 169 DL 170
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 185/441 (41%), Gaps = 47/441 (10%)
Query: 273 NGAVVLATTKVFLHLTLSMADVHQQVYERIKAPLLTQVSSGSPEQSYAILSHLHLLVMRA 332
N AVVLA V + + DV ++I PLL + S S + Y +L ++ +
Sbjct: 351 NSAVVLAAAGV-QWIMAPLEDV-----KKIVKPLLFLLRSSSASK-YVVLCNILVFAKAV 403
Query: 333 PYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARES 392
P +F+ +++F+ ++ VK KLEML+ +A S+ I+ E +Y + D A ++
Sbjct: 404 PSLFAPHFENFFICSSDAYQVKAYKLEMLSLIATTSSIASILREFEDYIKDPDRRFAADT 463
Query: 393 IRAVGKIALQQYDV-NAIVDRLLQFLEMEK---DYVTA--EALVLVKDLLRKYPQWSQD- 445
+ A+G A + + +D LL + E D+ +A EA VLV+ ++ +D
Sbjct: 464 VAAIGLCAKRLMTIPTTCLDGLLALVRQESFAGDFESADGEAGVLVQAVMSIQTMIERDP 523
Query: 446 ------CIAVVGNISSKNVQEPKAKAALIWMLGEYSQDMNDAPYVLESLVE--NWD-EEH 496
I + ++ S ++ A+A +IWM+G Y + P +L ++ + W +
Sbjct: 524 LRHEKVLIQLFRSLDS--IKVAAARATIIWMVGVYCSLGHIIPRMLTTITKYLAWSFKSE 581
Query: 497 SAEVRLHLLTAVMKCFFKRPPET----QKXXXXXXXXXXXDFHQDVHDRALFYYRLLQYK 552
++E +L +L + K ++ D D+ DR F +LL K
Sbjct: 582 ASETKLQILNTIAKVLISAEAGDFHMLKRIVVYVFELGEYDLSYDIRDRTRFLKKLLSCK 641
Query: 553 VSVAE----SVVNPPKQAVSVFADTQNSEVKD----RIFDEF---NSLS--VVYQKPSYM 599
++ E SV + A V ++K + + F SLS V++ P Y
Sbjct: 642 LASHEPAEDSVASQENIAAHVVEHVFGRKLKSVSPITLHNRFYLPGSLSQIVLHAAPGYE 701
Query: 600 FTDKEHRGILEFSDELGNLSISVESGDSVVPAQRVEENDKDLLLSTTEKDEVRDPGSNGS 659
K + E D+L +L E+ + ++ E + + SNGS
Sbjct: 702 PLPKPCSFVYEEQDQLSDLDKQREAAADLDGSEESSETGDE-----NGSSDYDSESSNGS 756
Query: 660 AYNAPSYDAAISQPLADLALP 680
+++ + +S D A P
Sbjct: 757 DFSSEGDERTVSNDANDPAAP 777
>AT3G55480.1 | Symbols: PAT2 | protein affected trafficking 2
| chr3:20566372-20570629 REVERSE LENGTH=987
Length = 987
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 185/441 (41%), Gaps = 47/441 (10%)
Query: 273 NGAVVLATTKVFLHLTLSMADVHQQVYERIKAPLLTQVSSGSPEQSYAILSHLHLLVMRA 332
N AVVLA V + + DV ++I PLL + S S + Y +L ++ +
Sbjct: 223 NSAVVLAAAGV-QWIMAPLEDV-----KKIVKPLLFLLRSSSASK-YVVLCNILVFAKAV 275
Query: 333 PYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARES 392
P +F+ +++F+ ++ VK KLEML+ +A S+ I+ E +Y + D A ++
Sbjct: 276 PSLFAPHFENFFICSSDAYQVKAYKLEMLSLIATTSSIASILREFEDYIKDPDRRFAADT 335
Query: 393 IRAVGKIALQQYDV-NAIVDRLLQFLEMEK---DYVTA--EALVLVKDLLRKYPQWSQD- 445
+ A+G A + + +D LL + E D+ +A EA VLV+ ++ +D
Sbjct: 336 VAAIGLCAKRLMTIPTTCLDGLLALVRQESFAGDFESADGEAGVLVQAVMSIQTMIERDP 395
Query: 446 ------CIAVVGNISSKNVQEPKAKAALIWMLGEYSQDMNDAPYVLESLVE--NWD-EEH 496
I + ++ S ++ A+A +IWM+G Y + P +L ++ + W +
Sbjct: 396 LRHEKVLIQLFRSLDS--IKVAAARATIIWMVGVYCSLGHIIPRMLTTITKYLAWSFKSE 453
Query: 497 SAEVRLHLLTAVMKCFFKRPPET----QKXXXXXXXXXXXDFHQDVHDRALFYYRLLQYK 552
++E +L +L + K ++ D D+ DR F +LL K
Sbjct: 454 ASETKLQILNTIAKVLISAEAGDFHMLKRIVVYVFELGEYDLSYDIRDRTRFLKKLLSCK 513
Query: 553 VSVAE----SVVNPPKQAVSVFADTQNSEVKD----RIFDEF---NSLS--VVYQKPSYM 599
++ E SV + A V ++K + + F SLS V++ P Y
Sbjct: 514 LASHEPAEDSVASQENIAAHVVEHVFGRKLKSVSPITLHNRFYLPGSLSQIVLHAAPGYE 573
Query: 600 FTDKEHRGILEFSDELGNLSISVESGDSVVPAQRVEENDKDLLLSTTEKDEVRDPGSNGS 659
K + E D+L +L E+ + ++ E + + SNGS
Sbjct: 574 PLPKPCSFVYEEQDQLSDLDKQREAAADLDGSEESSETGDE-----NGSSDYDSESSNGS 628
Query: 660 AYNAPSYDAAISQPLADLALP 680
+++ + +S D A P
Sbjct: 629 DFSSEGDERTVSNDANDPAAP 649