Miyakogusa Predicted Gene

Lj1g3v2036410.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2036410.2 CUFF.28344.2
         (366 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G25610.1 | Symbols: RD22, ATRD22 | BURP domain-containing pro...   306   1e-83
AT1G49320.1 | Symbols: ATUSPL1, USPL1 | unknown seed protein lik...   168   5e-42
AT1G60390.1 | Symbols: PG1 | polygalacturonase 1 | chr1:22247611...   132   3e-31
AT1G70370.2 | Symbols: PG2 | polygalacturonase 2 | chr1:26513003...   123   2e-28
AT1G70370.1 | Symbols: PG2 | polygalacturonase 2 | chr1:26513003...   123   2e-28
AT1G23760.1 | Symbols: JP630, PG3 | BURP domain-containing prote...   116   3e-26

>AT5G25610.1 | Symbols: RD22, ATRD22 | BURP domain-containing
           protein | chr5:8914498-8916684 REVERSE LENGTH=392
          Length = 392

 Score =  306 bits (785), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 157/249 (63%), Positives = 187/249 (75%), Gaps = 8/249 (3%)

Query: 124 PVFVNVG-SKSPFDYVYAATETQLHSDPNVALFFLEKNLHPGTKMNLHFTKT---SNKAT 179
           P++V V    +PF Y YAA ETQLH DPN ALFFLEK+L  G +MN+ F        K  
Sbjct: 144 PIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTA 203

Query: 180 FLPRIVADSIPFSSEKVELALNKYSVKAGSEEAQVMKNTIDECEQKGIQGEEKYCATSLE 239
           FLPR  A+++PF SEK    L ++SV+AGSEEA++MK TI+ECE + + GEEKYCATSLE
Sbjct: 204 FLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCATSLE 263

Query: 240 SMVDFTTSKLGE-NVNAVST-VVDKETEKQRYTIAT-GVKKLEAGDKAVVCHKQNYPYAV 296
           SMVDF+ SKLG+ +V AVST V  K    Q+Y IA  GVKKL + DK+VVCHKQ YP+AV
Sbjct: 264 SMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAGVKKL-SDDKSVVCHKQKYPFAV 322

Query: 297 FYCHKSDSTRAYSVPLEGDNGVRVKAVAVCHTDTSQWNPKHLAFQVLKVKPGTVPVCHFL 356
           FYCHK+  T  Y+VPLEG+NG+R KAVAVCH +TS WNP HLAF+VLKVKPGTVPVCHFL
Sbjct: 323 FYCHKAMMTTVYAVPLEGENGMRAKAVAVCHKNTSAWNPNHLAFKVLKVKPGTVPVCHFL 382

Query: 357 PEDHVVWVS 365
           PE HVVW S
Sbjct: 383 PETHVVWFS 391


>AT1G49320.1 | Symbols: ATUSPL1, USPL1 | unknown seed protein like 1
           | chr1:18246441-18247817 FORWARD LENGTH=280
          Length = 280

 Score =  168 bits (425), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 89/230 (38%), Positives = 134/230 (58%), Gaps = 13/230 (5%)

Query: 149 DPNVALFFLEKNLHPGTKMNLHFTKTSNKAT--FLPRIVADSIPFSSEKVELALNKYSVK 206
           DP++ ++F   +L  GTK+ ++F K   +     L R  AD IPF+  K++  L+ +S+ 
Sbjct: 52  DPSLYMYFTLNDLKLGTKLLIYFYKNDLQKLPPLLTRQQADLIPFTKSKLDFLLDHFSIT 111

Query: 207 AGSEEAQVMKNTIDECEQKGIQGEEKYCATSLESMVDFTTSKLGENVN--AVSTVVDKET 264
             S + + +K T+  C+ K I+GE K+C TSLES++D     +G NV+   ++T V    
Sbjct: 112 KDSPQGKAIKETLGHCDAKAIEGEHKFCGTSLESLIDLVKKTMGYNVDLKVMTTKVMVPA 171

Query: 265 EK------QRYTIATGVKKLEAGDKAVVCHKQNYPYAVFYCH-KSDSTRAYSVPLEGDNG 317
           +         YT     K+L  G K + CH+  YPYAV+YCH     +R + V L  D+G
Sbjct: 172 QNSISYALHNYTFVEAPKEL-VGIKMLGCHRMPYPYAVYYCHGHKGGSRVFEVNLVTDDG 230

Query: 318 V-RVKAVAVCHTDTSQWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWVSK 366
             RV   AVCH DTS W+  H+AF+VLK++P + PVCHF P D++VWV+K
Sbjct: 231 RQRVVGPAVCHMDTSTWDADHVAFKVLKMEPRSAPVCHFFPLDNIVWVTK 280


>AT1G60390.1 | Symbols: PG1 | polygalacturonase 1 |
           chr1:22247611-22249556 REVERSE LENGTH=624
          Length = 624

 Score =  132 bits (333), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 105/214 (49%), Gaps = 7/214 (3%)

Query: 155 FFLEKNLHPGTKMNLHFTKTSN-KATFLPRIVADSIPFSSEKVELALNKYSVKAGSEEAQ 213
           FF E  L  GT M +   K    K TFLPR +  ++PFSS  +      +     S  A 
Sbjct: 409 FFREAMLKEGTLMQMPDIKDKMPKRTFLPRNIVKNLPFSSSTIGEIWRVFGAGENSSMAG 468

Query: 214 VMKNTIDECEQKGIQGEEKYCATSLESMVDFTTSKLGENVNAVSTVVDKETEKQRYTIAT 273
           ++ + + ECE+    GE K C  S E M+DF TS LG  V  V T  +    K++  I  
Sbjct: 469 IISSAVSECERPASHGETKRCVGSAEDMIDFATSVLGRGV-VVRTTENVVGSKKKVVIGK 527

Query: 274 GVKKLEAGD--KAVVCHKQNYPYAVFYCHKSDSTRAYSVPLEGDNGVR--VKAVAVCHTD 329
            V  +  GD  +AV CH+  YPY ++YCH     R Y   L     +      VA+CH D
Sbjct: 528 -VNGINGGDVTRAVSCHQSLYPYLLYYCHSVPRVRVYETDLLDPKSLEKINHGVAICHID 586

Query: 330 TSQWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVW 363
           TS W+P H AF  L   PG + VCH++ E+ + W
Sbjct: 587 TSAWSPSHGAFLALGSGPGQIEVCHWIFENDMTW 620


>AT1G70370.2 | Symbols: PG2 | polygalacturonase 2 |
           chr1:26513003-26514998 REVERSE LENGTH=626
          Length = 626

 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 7/215 (3%)

Query: 155 FFLEKNLHPGTKMNLHFTKTSN-KATFLPRIVADSIPFSSEKVELALNKYSVKAGSEEAQ 213
           FF E +L  GT + +   K    K +FLPR +   +PFS+ K+      +     S    
Sbjct: 411 FFRESSLKEGTVIPMPDIKDKMPKRSFLPRSIITKLPFSTSKLGEIKRIFHAVENSTMGG 470

Query: 214 VMKNTIDECEQKGIQGEEKYCATSLESMVDFTTSKLGENVNAVSTVVDKETEKQRYTIAT 273
           ++ + + ECE+    GE K C  S E M+DF TS LG +V  + T  +    K++  I  
Sbjct: 471 IITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSV-VLRTTENVAGSKEKVVIGK 529

Query: 274 GVKKLEAGD--KAVVCHKQNYPYAVFYCHKSDSTRAYSVP-LEGDNGVRVK-AVAVCHTD 329
            V  +  G   KAV CH+  YPY ++YCH     R Y    LE ++  ++   +A+CH D
Sbjct: 530 -VNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMD 588

Query: 330 TSQWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWV 364
           TS W P H AF  L  KPG + VCH++ E+ + W 
Sbjct: 589 TSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNWA 623


>AT1G70370.1 | Symbols: PG2 | polygalacturonase 2 |
           chr1:26513003-26514998 REVERSE LENGTH=626
          Length = 626

 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 7/215 (3%)

Query: 155 FFLEKNLHPGTKMNLHFTKTSN-KATFLPRIVADSIPFSSEKVELALNKYSVKAGSEEAQ 213
           FF E +L  GT + +   K    K +FLPR +   +PFS+ K+      +     S    
Sbjct: 411 FFRESSLKEGTVIPMPDIKDKMPKRSFLPRSIITKLPFSTSKLGEIKRIFHAVENSTMGG 470

Query: 214 VMKNTIDECEQKGIQGEEKYCATSLESMVDFTTSKLGENVNAVSTVVDKETEKQRYTIAT 273
           ++ + + ECE+    GE K C  S E M+DF TS LG +V  + T  +    K++  I  
Sbjct: 471 IITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSV-VLRTTENVAGSKEKVVIGK 529

Query: 274 GVKKLEAGD--KAVVCHKQNYPYAVFYCHKSDSTRAYSVP-LEGDNGVRVK-AVAVCHTD 329
            V  +  G   KAV CH+  YPY ++YCH     R Y    LE ++  ++   +A+CH D
Sbjct: 530 -VNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMD 588

Query: 330 TSQWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWV 364
           TS W P H AF  L  KPG + VCH++ E+ + W 
Sbjct: 589 TSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNWA 623


>AT1G23760.1 | Symbols: JP630, PG3 | BURP domain-containing protein
           | chr1:8402142-8404147 FORWARD LENGTH=622
          Length = 622

 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 106/215 (49%), Gaps = 7/215 (3%)

Query: 155 FFLEKNLHPGTKMNLHFTKTSN-KATFLPRIVADSIPFSSEKVELALNKYSVKAGSEEAQ 213
           FF E  L  GT + +   K    K +FLPR +   +PFS+ K+      +     S    
Sbjct: 407 FFRESMLKEGTLIWMPDIKDKMPKRSFLPRSIVSKLPFSTSKIAEIKRVFHANDNSTMEG 466

Query: 214 VMKNTIDECEQKGIQGEEKYCATSLESMVDFTTSKLGENVNAVSTVVDKETEKQRYTIAT 273
           ++ + + ECE+     E K C  S E M+DF TS LG +V  + T       K++  I  
Sbjct: 467 IITDAVRECERPPTVSETKRCVGSAEDMIDFATSVLGRSV-VLRTTESVAGSKEKVMIGK 525

Query: 274 GVKKLEAGD--KAVVCHKQNYPYAVFYCHKSDSTRAY-SVPLEGDNGVRVK-AVAVCHTD 329
            V  +  G   K+V CH+  YPY ++YCH     R Y S  L+  +  ++   +A+CH D
Sbjct: 526 -VNGINGGRVTKSVSCHQSLYPYLLYYCHSVPKVRVYESDLLDPKSKAKINHGIAICHMD 584

Query: 330 TSQWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWV 364
           TS W   H AF +L  +PG + VCH++ E+ + W 
Sbjct: 585 TSAWGANHGAFMLLGSRPGQIEVCHWIFENDMNWA 619