Miyakogusa Predicted Gene

Lj1g3v2035180.4
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2035180.4 Non Chatacterized Hit- tr|I1K978|I1K978_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55494
PE,80.56,0.0000000006,seg,NULL,CUFF.28303.4
         (126 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G53570.4 | Symbols: AFC1, AME2, FC1 | FUS3-complementing gene...    68   2e-12
AT3G53570.2 | Symbols: AFC1, AME2, FC1 | FUS3-complementing gene...    68   2e-12
AT3G53570.1 | Symbols: AFC1, AME2, FC1 | FUS3-complementing gene...    68   2e-12
AT3G53570.3 | Symbols: AFC1, AME2, FC1 | FUS3-complementing gene...    68   2e-12
AT4G32660.3 | Symbols: AME3 | Protein kinase superfamily protein...    64   2e-11
AT4G32660.1 | Symbols: AME3 | Protein kinase superfamily protein...    64   2e-11
AT4G24740.1 | Symbols: AFC2, AME1, FC2 | FUS3-complementing gene...    63   6e-11
AT4G32660.2 | Symbols: AME3 | Protein kinase superfamily protein...    61   2e-10
AT4G24740.2 | Symbols: AFC2, AME1, FC2 | FUS3-complementing gene...    59   6e-10

>AT3G53570.4 | Symbols: AFC1, AME2, FC1 | FUS3-complementing gene 1
           | chr3:19861449-19864125 REVERSE LENGTH=467
          Length = 467

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/46 (67%), Positives = 35/46 (76%), Gaps = 5/46 (10%)

Query: 1   MLEIDVLERLTKKDGASSRCVQIINWFDYRNHICIV-----SSLYN 41
           M+EIDVL+RLT+ D   SRCVQI NWFDYRNHICIV      SLY+
Sbjct: 157 MIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKLGPSLYD 202


>AT3G53570.2 | Symbols: AFC1, AME2, FC1 | FUS3-complementing gene 1
           | chr3:19861449-19864125 REVERSE LENGTH=467
          Length = 467

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/46 (67%), Positives = 35/46 (76%), Gaps = 5/46 (10%)

Query: 1   MLEIDVLERLTKKDGASSRCVQIINWFDYRNHICIV-----SSLYN 41
           M+EIDVL+RLT+ D   SRCVQI NWFDYRNHICIV      SLY+
Sbjct: 157 MIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKLGPSLYD 202


>AT3G53570.1 | Symbols: AFC1, AME2, FC1 | FUS3-complementing gene 1
           | chr3:19861449-19864125 REVERSE LENGTH=467
          Length = 467

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/46 (67%), Positives = 35/46 (76%), Gaps = 5/46 (10%)

Query: 1   MLEIDVLERLTKKDGASSRCVQIINWFDYRNHICIV-----SSLYN 41
           M+EIDVL+RLT+ D   SRCVQI NWFDYRNHICIV      SLY+
Sbjct: 157 MIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKLGPSLYD 202


>AT3G53570.3 | Symbols: AFC1, AME2, FC1 | FUS3-complementing gene 1
           | chr3:19861449-19864083 REVERSE LENGTH=453
          Length = 453

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/46 (67%), Positives = 35/46 (76%), Gaps = 5/46 (10%)

Query: 1   MLEIDVLERLTKKDGASSRCVQIINWFDYRNHICIV-----SSLYN 41
           M+EIDVL+RLT+ D   SRCVQI NWFDYRNHICIV      SLY+
Sbjct: 143 MIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKLGPSLYD 188


>AT4G32660.3 | Symbols: AME3 | Protein kinase superfamily protein |
           chr4:15756420-15759107 FORWARD LENGTH=392
          Length = 392

 Score = 63.9 bits (154), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/36 (69%), Positives = 30/36 (83%)

Query: 1   MLEIDVLERLTKKDGASSRCVQIINWFDYRNHICIV 36
           M+EIDVL++L K D   +RCVQ+ NWFDYRNHICIV
Sbjct: 105 MIEIDVLQKLVKSDKGRTRCVQMKNWFDYRNHICIV 140


>AT4G32660.1 | Symbols: AME3 | Protein kinase superfamily protein |
           chr4:15756396-15759107 FORWARD LENGTH=400
          Length = 400

 Score = 63.9 bits (154), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/36 (69%), Positives = 30/36 (83%)

Query: 1   MLEIDVLERLTKKDGASSRCVQIINWFDYRNHICIV 36
           M+EIDVL++L K D   +RCVQ+ NWFDYRNHICIV
Sbjct: 113 MIEIDVLQKLVKSDKGRTRCVQMKNWFDYRNHICIV 148


>AT4G24740.1 | Symbols: AFC2, AME1, FC2 | FUS3-complementing gene 2
           | chr4:12754729-12757653 REVERSE LENGTH=427
          Length = 427

 Score = 62.8 bits (151), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 5/46 (10%)

Query: 1   MLEIDVLERLTKKDGASSRCVQIINWFDYRNHICIV-----SSLYN 41
           M+EI++L++L K D   +RCVQI NWFDYRNHICIV     SSLY+
Sbjct: 140 MIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYD 185


>AT4G32660.2 | Symbols: AME3 | Protein kinase superfamily protein |
           chr4:15756396-15758881 FORWARD LENGTH=356
          Length = 356

 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/36 (69%), Positives = 30/36 (83%)

Query: 1   MLEIDVLERLTKKDGASSRCVQIINWFDYRNHICIV 36
           M+EIDVL++L K D   +RCVQ+ NWFDYRNHICIV
Sbjct: 113 MIEIDVLQKLVKSDKGRTRCVQMKNWFDYRNHICIV 148


>AT4G24740.2 | Symbols: AFC2, AME1, FC2 | FUS3-complementing gene
          2 | chr4:12754729-12756549 REVERSE LENGTH=324
          Length = 324

 Score = 59.3 bits (142), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 5/46 (10%)

Query: 1  MLEIDVLERLTKKDGASSRCVQIINWFDYRNHICIV-----SSLYN 41
          M+EI++L++L K D   +RCVQI NWFDYRNHICIV     SSLY+
Sbjct: 37 MIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYD 82