Miyakogusa Predicted Gene
- Lj1g3v1991600.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1991600.3 tr|Q5DMW8|Q5DMW8_CUCME Protein disulfide
isomerase (PDI)-like protein 4 OS=Cucumis melo GN=PDI4
PE=4,35.44,2e-18,seg,NULL; Thioredoxin-like,Thioredoxin-like fold;
Cysteine-rich domain,NULL; Thioredoxin_8,NULL; C1_,CUFF.28258.3
(386 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G31240.2 | Symbols: | protein kinase C-like zinc finger prot... 478 e-135
AT4G31240.1 | Symbols: | protein kinase C-like zinc finger prot... 478 e-135
AT1G60420.1 | Symbols: | DC1 domain-containing protein | chr1:2... 286 2e-77
>AT4G31240.2 | Symbols: | protein kinase C-like zinc finger protein
| chr4:15176637-15177986 REVERSE LENGTH=392
Length = 392
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 221/381 (58%), Positives = 291/381 (76%)
Query: 5 NFEAKHIDSHDVLKILAAEGAEYLLSCEGKVPLSECDGKVICLFFSANWCRPCRAFVPRL 64
+++ K +S D+ ILAAEG E+LLS G+VPL GK ICLFFSA WCRPC+ F P L
Sbjct: 6 DYQVKFPESGDLYSILAAEGIEFLLSHSGEVPLEYIHGKTICLFFSAIWCRPCKDFTPEL 65
Query: 65 VELYETLRKRGINLEIIFVSFDREEDGFNEHLKSMPWLAVPFDVNLHRRLIDRYQVDQIP 124
++LYE L+ RG LEIIFVSFD + F EH MPWLAVPF+++L +L D+Y + +IP
Sbjct: 66 IKLYENLQNRGEELEIIFVSFDHDMTSFYEHFWCMPWLAVPFNLSLLNKLRDKYGISRIP 125
Query: 125 SFIPLYSEDLIVEKNLIECIEDYGADAFPFTRKRHEELKAIDKRKRXXXXXXXXXXXXGR 184
S +PLYS+++ V +++I IEDYG++AFPFT+KR EELKAID KR R
Sbjct: 126 SLVPLYSDEISVAEDVIGLIEDYGSEAFPFTKKRKEELKAIDDSKRLGGQLEKLLTHESR 185
Query: 185 DFLISGDDRKVPVSELAGKTIGLYFCAYWSPPSRAFTAQLTDVYNNLKATKGNCFEIVLI 244
+++++ + KV VS+L GKTIGLYF A+W PP R+FT+QL DVYN L T FE++LI
Sbjct: 186 NYVVARNGSKVLVSKLVGKTIGLYFGAHWCPPFRSFTSQLVDVYNELATTDKGSFEVILI 245
Query: 245 STDRDHKEFNVNRSSTPWLAIPYEDRTRHDLCRIYDIKGIPALVLIGPDGKVISLNGKFM 304
STDRD +EFN+N ++ PWLAIPYEDRTR DLCRI+++K IPALV+IGP+ K ++ N + M
Sbjct: 246 STDRDSREFNINMTNMPWLAIPYEDRTRQDLCRIFNVKLIPALVIIGPEEKTVTTNAREM 305
Query: 305 VTSYGADAFPFTESRIRDLEAALRKEGEALPQQVEDVKHEHVLKLDMAKAYVCDSCKEQG 364
V+ YG+ +FPFTESRI +L+A L+KEG++LP++V+D KHEH LKLDMAKAYVCD CK+QG
Sbjct: 306 VSLYGSRSFPFTESRIVELKACLKKEGDSLPRKVKDNKHEHELKLDMAKAYVCDFCKKQG 365
Query: 365 KFWAFSCDVCDYDLHPSCLEK 385
+FWAFSC+ CDYDLHP+C+E+
Sbjct: 366 RFWAFSCNACDYDLHPTCVEE 386
>AT4G31240.1 | Symbols: | protein kinase C-like zinc finger protein
| chr4:15176637-15177986 REVERSE LENGTH=392
Length = 392
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 221/381 (58%), Positives = 291/381 (76%)
Query: 5 NFEAKHIDSHDVLKILAAEGAEYLLSCEGKVPLSECDGKVICLFFSANWCRPCRAFVPRL 64
+++ K +S D+ ILAAEG E+LLS G+VPL GK ICLFFSA WCRPC+ F P L
Sbjct: 6 DYQVKFPESGDLYSILAAEGIEFLLSHSGEVPLEYIHGKTICLFFSAIWCRPCKDFTPEL 65
Query: 65 VELYETLRKRGINLEIIFVSFDREEDGFNEHLKSMPWLAVPFDVNLHRRLIDRYQVDQIP 124
++LYE L+ RG LEIIFVSFD + F EH MPWLAVPF+++L +L D+Y + +IP
Sbjct: 66 IKLYENLQNRGEELEIIFVSFDHDMTSFYEHFWCMPWLAVPFNLSLLNKLRDKYGISRIP 125
Query: 125 SFIPLYSEDLIVEKNLIECIEDYGADAFPFTRKRHEELKAIDKRKRXXXXXXXXXXXXGR 184
S +PLYS+++ V +++I IEDYG++AFPFT+KR EELKAID KR R
Sbjct: 126 SLVPLYSDEISVAEDVIGLIEDYGSEAFPFTKKRKEELKAIDDSKRLGGQLEKLLTHESR 185
Query: 185 DFLISGDDRKVPVSELAGKTIGLYFCAYWSPPSRAFTAQLTDVYNNLKATKGNCFEIVLI 244
+++++ + KV VS+L GKTIGLYF A+W PP R+FT+QL DVYN L T FE++LI
Sbjct: 186 NYVVARNGSKVLVSKLVGKTIGLYFGAHWCPPFRSFTSQLVDVYNELATTDKGSFEVILI 245
Query: 245 STDRDHKEFNVNRSSTPWLAIPYEDRTRHDLCRIYDIKGIPALVLIGPDGKVISLNGKFM 304
STDRD +EFN+N ++ PWLAIPYEDRTR DLCRI+++K IPALV+IGP+ K ++ N + M
Sbjct: 246 STDRDSREFNINMTNMPWLAIPYEDRTRQDLCRIFNVKLIPALVIIGPEEKTVTTNAREM 305
Query: 305 VTSYGADAFPFTESRIRDLEAALRKEGEALPQQVEDVKHEHVLKLDMAKAYVCDSCKEQG 364
V+ YG+ +FPFTESRI +L+A L+KEG++LP++V+D KHEH LKLDMAKAYVCD CK+QG
Sbjct: 306 VSLYGSRSFPFTESRIVELKACLKKEGDSLPRKVKDNKHEHELKLDMAKAYVCDFCKKQG 365
Query: 365 KFWAFSCDVCDYDLHPSCLEK 385
+FWAFSC+ CDYDLHP+C+E+
Sbjct: 366 RFWAFSCNACDYDLHPTCVEE 386
>AT1G60420.1 | Symbols: | DC1 domain-containing protein |
chr1:22261978-22264243 FORWARD LENGTH=578
Length = 578
Score = 286 bits (731), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 135/366 (36%), Positives = 218/366 (59%), Gaps = 3/366 (0%)
Query: 19 ILAAEGAEYLLSCEG-KVPLSECDGKVICLFFSANWCRPCRAFVPRLVELYETLRKRGIN 77
+L ++++S +G KVP+SE +GK I L FS R C P+LVE Y L++ +
Sbjct: 179 VLVTPSRDFVISPDGNKVPVSELEGKTIGLLFSVASYRKCTELTPKLVEFYTKLKENKED 238
Query: 78 LEIIFVSFDREEDGFNEHLKSMPWLAVPFDVNLHRRLIDRYQVDQIPSFIPLYSEDLIVE 137
EI+ +S + +E+ FN+ K+ PWLA+PF+ +L + + +P+ + L +
Sbjct: 239 FEIVLISLEDDEESFNQDFKTKPWLALPFNDKSGSKLARHFMLSTLPTLVILGPDGKTRH 298
Query: 138 KNLIECIEDYGADAFPFTRKRHEELKAIDKRKRXXXXXXXXXXXXGRDFLISGDDRKVPV 197
N+ E I+DYG A+PFT ++ +ELK ++K K ++++ D KV V
Sbjct: 299 SNVAEAIDDYGVLAYPFTPEKFQELKELEKAKVEAQTLESLLVSGDLNYVLGKDGAKVLV 358
Query: 198 SELAGKTIGLYFCAYWSPPSRAFTAQLTDVYNNLKATKGNCFEIVLISTDRDHKEFNVNR 257
S+L GKTI +YF A+W PP RAFT +L +VY +K + FE++ IS+DRD + F+
Sbjct: 359 SDLVGKTILMYFSAHWCPPCRAFTPKLVEVYKQIKE-RNEAFELIFISSDRDQESFDEYY 417
Query: 258 SSTPWLAIPYEDRTRHDLCRIYDIKGIPALVLIGPDGKVISLNGKFMVTSYGADAFPFTE 317
S PWLA+P+ D + L + + + GIP L +GP G+ ++ + +V ++GADA+PFTE
Sbjct: 418 SQMPWLALPFGDPRKASLAKTFKVGGIPMLAALGPTGQTVTKEARDLVVAHGADAYPFTE 477
Query: 318 SRIRDLEAALRKEGEALPQQVEDVKH-EHVLKLDMAKAYVCDSCKEQGKFWAFSCDVCDY 376
R++++EA + + P++V+ V H EH L+L + Y CD C+E+G W++ CD CD+
Sbjct: 478 ERLKEIEAKYDEIAKDWPKKVKHVLHEEHELELTRVQVYTCDKCEEEGTIWSYHCDECDF 537
Query: 377 DLHPSC 382
DLH C
Sbjct: 538 DLHAKC 543
Score = 231 bits (588), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 134/363 (36%), Positives = 201/363 (55%), Gaps = 8/363 (2%)
Query: 1 MAGINFEAKHIDSHDVLKILAAEGAEYLLSCEG-KVPLSECDGKVICLFFSANWCRPCRA 59
MA + + D+ D+ +L++ ++L+ +G +V + GK I L+FSA WC PC+
Sbjct: 1 MAETSKQVNGDDAQDLHSLLSSPARDFLVRNDGEQVKVDSLLGKKIGLYFSAAWCGPCQR 60
Query: 60 FVPRLVELYETLRKRGINLEIIFVSFDREEDGFNEHLKSMPWLAVPF-DVNLHRRLIDRY 118
F P+LVE+Y L + + EI+FVS D +E+ F ++ + MPWLAVPF D RL + +
Sbjct: 61 FTPQLVEVYNELSSK-VGFEIVFVSGDEDEESFGDYFRKMPWLAVPFTDSETRDRLDELF 119
Query: 119 QVDQIPSFIPLYSEDLIVEKNLIECIEDYGADAFPFTRKRHEELKAIDKRKRXXXXXXXX 178
+V IP+ + + +V +N + I YGADA+PFT ++ +E+K + R R
Sbjct: 120 KVRGIPNLVMVDDHGKLVNENGVGVIRSYGADAYPFTPEKMKEIKEDEDRARRGQTLRSV 179
Query: 179 XXXXGRDFLISGDDRKVPVSELAGKTIGLYFCAYWSPPSRAFTAQLTDVYNNLKATKGNC 238
RDF+IS D KVPVSEL GKTIGL F T +L + Y LK K +
Sbjct: 180 LVTPSRDFVISPDGNKVPVSELEGKTIGLLFSVASYRKCTELTPKLVEFYTKLKENKED- 238
Query: 239 FEIVLISTDRDHKEFNVNRSSTPWLAIPYEDRTRHDLCRIYDIKGIPALVLIGPDGKVIS 298
FEIVLIS + D + FN + + PWLA+P+ D++ L R + + +P LV++GPDGK
Sbjct: 239 FEIVLISLEDDEESFNQDFKTKPWLALPFNDKSGSKLARHFMLSTLPTLVILGPDGKTRH 298
Query: 299 LNGKFMVTSYGADAFPFTESR---IRDLEAALRKEGEALPQQVEDVKHEHVLKLDMAKAY 355
N + YG A+PFT + +++LE A + E + L + +VL D AK
Sbjct: 299 SNVAEAIDDYGVLAYPFTPEKFQELKELEKA-KVEAQTLESLLVSGDLNYVLGKDGAKVL 357
Query: 356 VCD 358
V D
Sbjct: 358 VSD 360
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 96/160 (60%), Gaps = 1/160 (0%)
Query: 6 FEAKHIDSHDVLKILAAEGAEYLLSCEG-KVPLSECDGKVICLFFSANWCRPCRAFVPRL 64
E +++ + +L + Y+L +G KV +S+ GK I ++FSA+WC PCRAF P+L
Sbjct: 326 LEKAKVEAQTLESLLVSGDLNYVLGKDGAKVLVSDLVGKTILMYFSAHWCPPCRAFTPKL 385
Query: 65 VELYETLRKRGINLEIIFVSFDREEDGFNEHLKSMPWLAVPFDVNLHRRLIDRYQVDQIP 124
VE+Y+ +++R E+IF+S DR+++ F+E+ MPWLA+PF L ++V IP
Sbjct: 386 VEVYKQIKERNEAFELIFISSDRDQESFDEYYSQMPWLALPFGDPRKASLAKTFKVGGIP 445
Query: 125 SFIPLYSEDLIVEKNLIECIEDYGADAFPFTRKRHEELKA 164
L V K + + +GADA+PFT +R +E++A
Sbjct: 446 MLAALGPTGQTVTKEARDLVVAHGADAYPFTEERLKEIEA 485