Miyakogusa Predicted Gene

Lj1g3v1991490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1991490.1 Non Chatacterized Hit- tr|I1M0D7|I1M0D7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,57.45,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; DUF382,Domain of
unknown function DUF382;,CUFF.28240.1
         (354 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G21660.1 | Symbols:  | proline-rich spliceosome-associated (P...   292   3e-79
AT4G21660.2 | Symbols:  | proline-rich spliceosome-associated (P...   282   3e-76

>AT4G21660.1 | Symbols:  | proline-rich spliceosome-associated (PSP)
           family protein | chr4:11506259-11509772 REVERSE
           LENGTH=584
          Length = 584

 Score =  292 bits (747), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 156/245 (63%), Positives = 185/245 (75%), Gaps = 31/245 (12%)

Query: 74  FRRIFTKFSF-----SDFAGSKDTGMKKAD---------SDTGSEEEDGVKEKGISNKKK 119
           F+ IF KF+F     S+  G+KD   +K D              E+++  KEKGISNKKK
Sbjct: 98  FKEIFEKFNFREPLASEEDGTKDESEEKEDVKKKVNSDSDSDDDEQDNQNKEKGISNKKK 157

Query: 120 KLQRRMKIAELKRICSRPDVVEVWDATASDPKLLVFLKSCRNTVPVPRHWSRKRKFLQGK 179
           KLQRRMKIAELK++ +RPDVVEVWDAT++DPKLLVFLKS RNTVPVPRHWS+KRK+LQGK
Sbjct: 158 KLQRRMKIAELKQVSARPDVVEVWDATSADPKLLVFLKSYRNTVPVPRHWSQKRKYLQGK 217

Query: 180 IGIEIEPFQLPEFVAATGIEKVR-----------LKQKQRE--PSKLGRMEIDYKVLHDA 226
            GIE +PF LP+F+AATGIEK+R           LKQKQRE    K+G+M+IDY+VLHDA
Sbjct: 218 RGIEKQPFHLPDFIAATGIEKIRQAYIEKEDGKKLKQKQRERMQPKMGKMDIDYQVLHDA 277

Query: 227 FFKYQRKPKLSSVGEVYHEGKEFEVKLREMKLKAGVLSHELKEALGMPEGDELTPPWLIN 286
           FFKYQ KPKLS++G++Y EGKEFEVKLRE   K G LS++LKEALGMPEG    PPWLIN
Sbjct: 278 FFKYQTKPKLSALGDLYFEGKEFEVKLRET--KPGFLSNDLKEALGMPEG--APPPWLIN 333

Query: 287 MQRYG 291
           MQRYG
Sbjct: 334 MQRYG 338


>AT4G21660.2 | Symbols:  | proline-rich spliceosome-associated (PSP)
           family protein | chr4:11506259-11509772 REVERSE
           LENGTH=598
          Length = 598

 Score =  282 bits (721), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 156/259 (60%), Positives = 185/259 (71%), Gaps = 45/259 (17%)

Query: 74  FRRIFTKFSF-----SDFAGSKDTGMKKAD---------SDTGSEEEDGVKEKGISNKKK 119
           F+ IF KF+F     S+  G+KD   +K D              E+++  KEKGISNKKK
Sbjct: 98  FKEIFEKFNFREPLASEEDGTKDESEEKEDVKKKVNSDSDSDDDEQDNQNKEKGISNKKK 157

Query: 120 KLQRRMKIAELKRICSRPDVVEVWDATASDPKLLVFLKSCRNTVPVPRHWSRKRKFLQ-- 177
           KLQRRMKIAELK++ +RPDVVEVWDAT++DPKLLVFLKS RNTVPVPRHWS+KRK+LQ  
Sbjct: 158 KLQRRMKIAELKQVSARPDVVEVWDATSADPKLLVFLKSYRNTVPVPRHWSQKRKYLQGN 217

Query: 178 ------------GKIGIEIEPFQLPEFVAATGIEKVR-----------LKQKQRE--PSK 212
                       GK GIE +PF LP+F+AATGIEK+R           LKQKQRE    K
Sbjct: 218 YIKRDRNVCDNHGKRGIEKQPFHLPDFIAATGIEKIRQAYIEKEDGKKLKQKQRERMQPK 277

Query: 213 LGRMEIDYKVLHDAFFKYQRKPKLSSVGEVYHEGKEFEVKLREMKLKAGVLSHELKEALG 272
           +G+M+IDY+VLHDAFFKYQ KPKLS++G++Y EGKEFEVKLRE   K G LS++LKEALG
Sbjct: 278 MGKMDIDYQVLHDAFFKYQTKPKLSALGDLYFEGKEFEVKLRET--KPGFLSNDLKEALG 335

Query: 273 MPEGDELTPPWLINMQRYG 291
           MPEG    PPWLINMQRYG
Sbjct: 336 MPEG--APPPWLINMQRYG 352