Miyakogusa Predicted Gene

Lj1g3v1967330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1967330.1 Non Chatacterized Hit- tr|G7JCD3|G7JCD3_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,40.23,0.000000000000003,coiled-coil,NULL; Plant
calmodulin-binding domain,Calmodulin-binding domain, plant; seg,NULL;
CaM_bi,CUFF.28229.1
         (470 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G39380.1 | Symbols:  | Plant calmodulin-binding protein-relat...    55   1e-07
AT5G10660.1 | Symbols:  | calmodulin-binding protein-related | c...    54   2e-07

>AT5G39380.1 | Symbols:  | Plant calmodulin-binding protein-related
           | chr5:15759163-15760686 REVERSE LENGTH=507
          Length = 507

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/35 (71%), Positives = 31/35 (88%)

Query: 434 VSNDVIEETASKLLEARKNKVRALAGAFQTVIDYQ 468
           + N+VIEETASKL+EARK+KV+AL GAF+TVI  Q
Sbjct: 471 LFNNVIEETASKLVEARKSKVKALVGAFETVISLQ 505


>AT5G10660.1 | Symbols:  | calmodulin-binding protein-related |
           chr5:3370553-3371776 FORWARD LENGTH=407
          Length = 407

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/59 (57%), Positives = 41/59 (69%), Gaps = 5/59 (8%)

Query: 413 VAESPKPNQQTASVHGKKESQVS-NDVIEETASKLLE-ARKNKVRALAGAFQTVIDYQT 469
           V E P+   +   V GKKES  + NDVI   ASK+ E ++KNKV ALAGAFQTVIDY+T
Sbjct: 348 VEELPEEGTKNEVVQGKKESPTAYNDVI---ASKMQENSKKNKVLALAGAFQTVIDYET 403