Miyakogusa Predicted Gene
- Lj1g3v1966220.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1966220.2 Non Chatacterized Hit- tr|B6SVE9|B6SVE9_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,32.62,5e-18,seg,NULL,CUFF.28215.2
(592 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G31430.3 | Symbols: | unknown protein; LOCATED IN: plasma me... 161 1e-39
AT4G31430.1 | Symbols: | unknown protein; LOCATED IN: plasma me... 161 1e-39
AT4G31430.2 | Symbols: | unknown protein; LOCATED IN: plasma me... 160 2e-39
>AT4G31430.3 | Symbols: | unknown protein; LOCATED IN: plasma
membrane; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr4:15248510-15251945 FORWARD LENGTH=485
Length = 485
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/274 (40%), Positives = 151/274 (55%), Gaps = 28/274 (10%)
Query: 39 PNWLSRLVISPTRFIASGAGKILSTVLDLEXXXXXXXXXXXXXXXXXXXXXXEEVGPLDD 98
P+W+SRLV P IASGAGK +S+V+ + ++
Sbjct: 48 PSWISRLVYKPASVIASGAGKFISSVVFSDSSSSSEEDEDSSSDIDGDED-------VEK 100
Query: 99 ENDNTFEGDDDALNKPLDGNEKSKHVIEQLLMQESFSREEGDRLIKIIRSRVVDSPTVNG 158
N + E D + +P SK VIEQLL+QE+F+REEGDRLI II++RVVD P+V
Sbjct: 101 NNPDFTEEDLLSAQQPSIQRLSSKRVIEQLLLQETFAREEGDRLIDIIKARVVDHPSVPS 160
Query: 159 DVDKRTSDMAIRTXXXXXXXXXXXXVMEAKKWLQQKKSGIDSNSDLGHGSRSLNLVSSPQ 218
++ D + T VMEA+KWL++KKSG S
Sbjct: 161 AIETSHDDYGL-TSDVNVGEMSNTAVMEARKWLEEKKSGSSSKYKATE------------ 207
Query: 219 APNGEGSPVDVAKLYMRARPPWASPSVDH--NKPPTLSGIQLFKEETPHLFSGNSTSSSK 276
+G GSPVDVAK YMRAR PW SP+ ++ + P+ + +Q TP +S + SSSK
Sbjct: 208 --DGAGSPVDVAKSYMRARLPWGSPAANNLDFRSPSSARVQ----GTPLPYSAGNFSSSK 261
Query: 277 LKRGSPATGSWSIQDEIRRVRSRATEEMLRTPSS 310
LKR S + SW+IQDEIR+VR++ATEEML++PSS
Sbjct: 262 LKRKSGSNQSWNIQDEIRKVRAKATEEMLKSPSS 295
>AT4G31430.1 | Symbols: | unknown protein; LOCATED IN: plasma
membrane; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr4:15248510-15251945 FORWARD LENGTH=485
Length = 485
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/274 (40%), Positives = 151/274 (55%), Gaps = 28/274 (10%)
Query: 39 PNWLSRLVISPTRFIASGAGKILSTVLDLEXXXXXXXXXXXXXXXXXXXXXXEEVGPLDD 98
P+W+SRLV P IASGAGK +S+V+ + ++
Sbjct: 48 PSWISRLVYKPASVIASGAGKFISSVVFSDSSSSSEEDEDSSSDIDGDED-------VEK 100
Query: 99 ENDNTFEGDDDALNKPLDGNEKSKHVIEQLLMQESFSREEGDRLIKIIRSRVVDSPTVNG 158
N + E D + +P SK VIEQLL+QE+F+REEGDRLI II++RVVD P+V
Sbjct: 101 NNPDFTEEDLLSAQQPSIQRLSSKRVIEQLLLQETFAREEGDRLIDIIKARVVDHPSVPS 160
Query: 159 DVDKRTSDMAIRTXXXXXXXXXXXXVMEAKKWLQQKKSGIDSNSDLGHGSRSLNLVSSPQ 218
++ D + T VMEA+KWL++KKSG S
Sbjct: 161 AIETSHDDYGL-TSDVNVGEMSNTAVMEARKWLEEKKSGSSSKYKATE------------ 207
Query: 219 APNGEGSPVDVAKLYMRARPPWASPSVDH--NKPPTLSGIQLFKEETPHLFSGNSTSSSK 276
+G GSPVDVAK YMRAR PW SP+ ++ + P+ + +Q TP +S + SSSK
Sbjct: 208 --DGAGSPVDVAKSYMRARLPWGSPAANNLDFRSPSSARVQ----GTPLPYSAGNFSSSK 261
Query: 277 LKRGSPATGSWSIQDEIRRVRSRATEEMLRTPSS 310
LKR S + SW+IQDEIR+VR++ATEEML++PSS
Sbjct: 262 LKRKSGSNQSWNIQDEIRKVRAKATEEMLKSPSS 295
>AT4G31430.2 | Symbols: | unknown protein; LOCATED IN: plasma
membrane; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr4:15248510-15252204 FORWARD LENGTH=574
Length = 574
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/274 (40%), Positives = 151/274 (55%), Gaps = 28/274 (10%)
Query: 39 PNWLSRLVISPTRFIASGAGKILSTVLDLEXXXXXXXXXXXXXXXXXXXXXXEEVGPLDD 98
P+W+SRLV P IASGAGK +S+V+ + ++
Sbjct: 48 PSWISRLVYKPASVIASGAGKFISSVVFSDSSSSSEEDEDSSSDIDGDED-------VEK 100
Query: 99 ENDNTFEGDDDALNKPLDGNEKSKHVIEQLLMQESFSREEGDRLIKIIRSRVVDSPTVNG 158
N + E D + +P SK VIEQLL+QE+F+REEGDRLI II++RVVD P+V
Sbjct: 101 NNPDFTEEDLLSAQQPSIQRLSSKRVIEQLLLQETFAREEGDRLIDIIKARVVDHPSVPS 160
Query: 159 DVDKRTSDMAIRTXXXXXXXXXXXXVMEAKKWLQQKKSGIDSNSDLGHGSRSLNLVSSPQ 218
++ D + T VMEA+KWL++KKSG S
Sbjct: 161 AIETSHDDYGL-TSDVNVGEMSNTAVMEARKWLEEKKSGSSSKYKATE------------ 207
Query: 219 APNGEGSPVDVAKLYMRARPPWASPSVDH--NKPPTLSGIQLFKEETPHLFSGNSTSSSK 276
+G GSPVDVAK YMRAR PW SP+ ++ + P+ + +Q TP +S + SSSK
Sbjct: 208 --DGAGSPVDVAKSYMRARLPWGSPAANNLDFRSPSSARVQ----GTPLPYSAGNFSSSK 261
Query: 277 LKRGSPATGSWSIQDEIRRVRSRATEEMLRTPSS 310
LKR S + SW+IQDEIR+VR++ATEEML++PSS
Sbjct: 262 LKRKSGSNQSWNIQDEIRKVRAKATEEMLKSPSS 295