Miyakogusa Predicted Gene
- Lj1g3v1965120.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1965120.2 Non Chatacterized Hit- tr|I1JUL7|I1JUL7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.723
PE=4,81.95,0,CRYPTOCHROME,NULL; FAD_binding_7,DNA photolyase,
FAD-binding/Cryptochrome, C-terminal; DNA_photolyas,CUFF.28199.2
(303 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G24850.1 | Symbols: CRY3 | cryptochrome 3 | chr5:8535399-8538... 411 e-115
AT2G47590.1 | Symbols: PHR2 | photolyase/blue-light receptor 2 |... 141 7e-34
AT3G15620.1 | Symbols: UVR3 | DNA photolyase family protein | ch... 65 5e-11
AT3G15620.2 | Symbols: UVR3 | DNA photolyase family protein | ch... 65 6e-11
>AT5G24850.1 | Symbols: CRY3 | cryptochrome 3 | chr5:8535399-8538016
REVERSE LENGTH=526
Length = 526
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 193/277 (69%), Positives = 230/277 (83%), Gaps = 13/277 (4%)
Query: 1 MKRGVNLLIRHGKPEDVLPSLAKAFGAHTVYAQKETCSEELNVESSVIKGLQQVVIPPEQ 60
MKRG+NLLIR GKPE++LPSLAK FGA TV+A KETCSEE++VE V +GL++V
Sbjct: 111 MKRGLNLLIRSGKPEEILPSLAKDFGARTVFAHKETCSEEVDVERLVNQGLKRV------ 164
Query: 61 SAGLINSSNHPKLQFIWGTTMYHLDDLPFDAACLPDVYTQFRKTVEAKCTVRSCIKLPAS 120
N KL+ IWG+TMYH DDLPFD LPDVYTQFRK+VEAKC++RS ++P S
Sbjct: 165 -------GNSTKLELIWGSTMYHKDDLPFDVFDLPDVYTQFRKSVEAKCSIRSSTRIPLS 217
Query: 121 LGPPPLIEDWGSLPSLEQLGLCSQNVSKGMKFVGGETAALSRVYEYFWKKDLLKVYKETR 180
LGP P ++DWG +P+LE+LG+ Q V++GM+FVGGE+A + RV+EYFWKKDLLKVYKETR
Sbjct: 218 LGPTPSVDDWGDVPTLEKLGVEPQEVTRGMRFVGGESAGVGRVFEYFWKKDLLKVYKETR 277
Query: 181 NGMLGPDYSTKFSPWLASGSLSPRFIHEEVKRYENERLANSSTYWVLFELIWRDYFRFIS 240
NGMLGPDYSTKFSPWLA G +SPRFI+EEV+RYE ER+AN+STYWVLFELIWRDYFRF+S
Sbjct: 278 NGMLGPDYSTKFSPWLAFGCISPRFIYEEVQRYEKERVANNSTYWVLFELIWRDYFRFLS 337
Query: 241 VKYGNSLFHLGGPRKVQNRWSQDRKLFESWRDGCTGY 277
+K GNSLFHLGGPR VQ +WSQD+KLFESWRD TGY
Sbjct: 338 IKCGNSLFHLGGPRNVQGKWSQDQKLFESWRDAKTGY 374
>AT2G47590.1 | Symbols: PHR2 | photolyase/blue-light receptor 2 |
chr2:19521888-19523732 FORWARD LENGTH=447
Length = 447
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 136/263 (51%), Gaps = 37/263 (14%)
Query: 3 RGVNLLIRHGKPEDVLPSLAKAFGAHTVYAQKETCSEELNVESSVIKGLQQVVIPPEQSA 62
RG NL++R GKPE VL LAK GA VYA +E +E+ E + +++ +
Sbjct: 186 RGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDEVKAEGKIETAMKEEGV------ 239
Query: 63 GLINSSNHPKLQFIWGTTMYHLDDLPFDAACLPDVYTQFRKTVEAKCTVRSCIKLPASLG 122
++++ WG+T+YHLDDLPF LP Y F+ V+ K +R I L
Sbjct: 240 ---------EVKYFWGSTLYHLDDLPFKIEDLPSNYGAFKDKVQ-KLEIRKTIAALDQLK 289
Query: 123 PPPLIED--WGSLPSLEQLGL-----CSQNVSKGMKFVGGETAALSRVYEYFW--KKDLL 173
P D G +PSL LG+ SQ M VGGET AL+R+ + + L
Sbjct: 290 SLPSRGDVELGDIPSLLDLGISPTPRTSQEGKPTM--VGGETEALTRLKSFAADCQARLS 347
Query: 174 K-VYKETRNGMLGPDYSTKFSPWLASGSLSPRFIHEEVKRYENERL---------ANSST 223
K K N + G ++S K SPWLA GS+SPR + +E+K+ + ++
Sbjct: 348 KGNQKGGNNSVFGANFSCKISPWLAMGSISPRSMFDELKKTISASTTSTTPRNGPGDTGL 407
Query: 224 YWVLFELIWRDYFRFISVKYGNS 246
W+++EL+WRD+FRFI+ KY ++
Sbjct: 408 NWLMYELLWRDFFRFITKKYSSA 430
>AT3G15620.1 | Symbols: UVR3 | DNA photolyase family protein |
chr3:5293475-5296548 REVERSE LENGTH=556
Length = 556
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 16/202 (7%)
Query: 95 PDVYTQFRKTVEAKCTVRSCIKLPASLGPPPLIEDWGSL-----PSLEQLGLCSQNVSKG 149
P Y F K +S + + S PP I D G+L PSLE+LG +
Sbjct: 177 PLSYQSFLKVAGEPSCAKSELVMSYSSLPP--IGDIGNLGISEVPSLEELGYKDDEQADW 234
Query: 150 MKFVGGETAALSRVYEYFWKKDLLKVYKETR---NGMLGPDYSTKFSPWLASGSLSPRFI 206
F GGE+ AL R+ + K + +++ + + L P +T SP+L G LS R+
Sbjct: 235 TPFRGGESEALKRLTKSISDKAWVANFEKPKGDPSAFLKPA-TTVMSPYLKFGCLSSRYF 293
Query: 207 HEEVKR-YENERLANSSTYWVLFELIWRDYFRFISVKYGNSLFH-LGGPRKV-QNRWSQD 263
++ ++ Y++ + S +L +L+WR++F + +G F + G R Q W++D
Sbjct: 294 YQCLQNIYKDVKKHTSPPVSLLGQLLWREFF--YTTAFGTPNFDKMKGNRICKQIPWNED 351
Query: 264 RKLFESWRDGCTGYSFYKKFTV 285
+ +WRDG TGY + V
Sbjct: 352 HAMLAAWRDGKTGYPWIDAIMV 373
>AT3G15620.2 | Symbols: UVR3 | DNA photolyase family protein |
chr3:5294201-5296548 REVERSE LENGTH=445
Length = 445
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 16/202 (7%)
Query: 95 PDVYTQFRKTVEAKCTVRSCIKLPASLGPPPLIEDWGSL-----PSLEQLGLCSQNVSKG 149
P Y F K +S + + S PP I D G+L PSLE+LG +
Sbjct: 177 PLSYQSFLKVAGEPSCAKSELVMSYSSLPP--IGDIGNLGISEVPSLEELGYKDDEQADW 234
Query: 150 MKFVGGETAALSRVYEYFWKKDLLKVYKETR---NGMLGPDYSTKFSPWLASGSLSPRFI 206
F GGE+ AL R+ + K + +++ + + L P +T SP+L G LS R+
Sbjct: 235 TPFRGGESEALKRLTKSISDKAWVANFEKPKGDPSAFLKPA-TTVMSPYLKFGCLSSRYF 293
Query: 207 HEEVKR-YENERLANSSTYWVLFELIWRDYFRFISVKYGNSLFH-LGGPRKV-QNRWSQD 263
++ ++ Y++ + S +L +L+WR++F + +G F + G R Q W++D
Sbjct: 294 YQCLQNIYKDVKKHTSPPVSLLGQLLWREFF--YTTAFGTPNFDKMKGNRICKQIPWNED 351
Query: 264 RKLFESWRDGCTGYSFYKKFTV 285
+ +WRDG TGY + V
Sbjct: 352 HAMLAAWRDGKTGYPWIDAIMV 373