Miyakogusa Predicted Gene

Lj1g3v1965110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1965110.1 Non Chatacterized Hit- tr|Q681Z9|Q681Z9_ARATH
Putative uncharacterized protein At4g31090
OS=Arabidop,50,0.000000000001,coiled-coil,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.28266.1
         (303 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G31080.1 | Symbols:  | Protein of unknown function (DUF2296) ...   327   9e-90
AT4G31080.2 | Symbols:  | Protein of unknown function (DUF2296) ...   309   2e-84
AT2G24330.1 | Symbols:  | Protein of unknown function (DUF2296) ...   285   2e-77

>AT4G31080.1 | Symbols:  | Protein of unknown function (DUF2296) |
           chr4:15121186-15123072 FORWARD LENGTH=409
          Length = 409

 Score =  327 bits (837), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 158/273 (57%), Positives = 209/273 (76%), Gaps = 4/273 (1%)

Query: 35  FFSRIWNGIFRLHGDDFEKRLQHISKEEATVMSRMSKRSRTWRRMCRNLIIFSVIFEVIA 94
           FFSR+WNGIFR+ GDDFEKRLQ+IS+EEATV+SRM +RS +WR++ RNLI+ SV+FE+IA
Sbjct: 41  FFSRLWNGIFRVRGDDFEKRLQYISREEATVLSRMKRRSISWRKLTRNLIVSSVLFEIIA 100

Query: 95  VSYAIMTTRSVDMNWKMRAIRVLPMFLLPALSSAAYSGFVSFTKICDRRDQKILDRLRAE 154
           V YAI+TTR+ D++W+MR+ R+LPMF+LPA+S+ AYS  VSF+K+ DRRDQK L++LRAE
Sbjct: 101 VGYAILTTRTEDLDWRMRSFRILPMFILPAVSALAYSSIVSFSKMFDRRDQKTLEKLRAE 160

Query: 155 RQAKIDELKEKTNYYSTQQLIQRXXXXXXXXXXXXXXXXXXXXXDSGLKVHMGDESKPNS 214
           R AKI+ELKE+TNYY+TQQLIQR                     DSGLKV++GDES+ + 
Sbjct: 161 RLAKINELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLKVYLGDESQLDP 220

Query: 215 ATGKSNDIELVQSTGLRNRKQVHSSP---GTTTTNFDEQQLVDSGGIDQ-TQTSEYNQLV 270
           ++GKSND+E+ QS GLRNR+Q ++ P   G+T+T+  + +   SG  ++   T+E NQ +
Sbjct: 221 SSGKSNDMEVNQSRGLRNRRQPNTRPHGSGSTSTHHSDDESHHSGTSERFPGTTEQNQQM 280

Query: 271 VVEHQHPQSSTAQDGGWIARIAALLVGEDPTQS 303
           +VEH  PQ   A DG WI+RIAALLVGEDPTQS
Sbjct: 281 LVEHYSPQGYAAHDGSWISRIAALLVGEDPTQS 313


>AT4G31080.2 | Symbols:  | Protein of unknown function (DUF2296) |
           chr4:15121186-15123072 FORWARD LENGTH=443
          Length = 443

 Score =  309 bits (791), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 158/307 (51%), Positives = 209/307 (68%), Gaps = 38/307 (12%)

Query: 35  FFSRIWNGIFRLHGDDFEKRLQHISKEEATVMSRMSKRSRTWRRMCRNLIIFSVIFEVIA 94
           FFSR+WNGIFR+ GDDFEKRLQ+IS+EEATV+SRM +RS +WR++ RNLI+ SV+FE+IA
Sbjct: 41  FFSRLWNGIFRVRGDDFEKRLQYISREEATVLSRMKRRSISWRKLTRNLIVSSVLFEIIA 100

Query: 95  VSYAIMTTRSVDMNWKMRAIRVLPMFLLPALSSAAYSGFVSFTKICDRRDQKILDRLRAE 154
           V YAI+TTR+ D++W+MR+ R+LPMF+LPA+S+ AYS  VSF+K+ DRRDQK L++LRAE
Sbjct: 101 VGYAILTTRTEDLDWRMRSFRILPMFILPAVSALAYSSIVSFSKMFDRRDQKTLEKLRAE 160

Query: 155 RQAKIDELKEKTNYYSTQQLI----------------------------------QRXXX 180
           R AKI+ELKE+TNYY+TQQLI                                  QR   
Sbjct: 161 RLAKINELKERTNYYTTQQLIQAWHSHATKERSMFADLKRLTTACRAGANRIVLMQRYDP 220

Query: 181 XXXXXXXXXXXXXXXXXXDSGLKVHMGDESKPNSATGKSNDIELVQSTGLRNRKQVHSSP 240
                             DSGLKV++GDES+ + ++GKSND+E+ QS GLRNR+Q ++ P
Sbjct: 221 DPAAKAAAATVLASKLGADSGLKVYLGDESQLDPSSGKSNDMEVNQSRGLRNRRQPNTRP 280

Query: 241 ---GTTTTNFDEQQLVDSGGIDQ-TQTSEYNQLVVVEHQHPQSSTAQDGGWIARIAALLV 296
              G+T+T+  + +   SG  ++   T+E NQ ++VEH  PQ   A DG WI+RIAALLV
Sbjct: 281 HGSGSTSTHHSDDESHHSGTSERFPGTTEQNQQMLVEHYSPQGYAAHDGSWISRIAALLV 340

Query: 297 GEDPTQS 303
           GEDPTQS
Sbjct: 341 GEDPTQS 347


>AT2G24330.1 | Symbols:  | Protein of unknown function (DUF2296) |
           chr2:10347340-10349566 REVERSE LENGTH=408
          Length = 408

 Score =  285 bits (730), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 151/299 (50%), Positives = 190/299 (63%), Gaps = 6/299 (2%)

Query: 8   VGEGGEKKETSPTXXXXXXXXXXXXXXFFSRIWNGIFRLHGDDFEKRLQHISKEEATVMS 67
           V  GGEK +++                 FSR+WN IFR+ GDDFEKRL++ISKEEATV +
Sbjct: 13  VESGGEKNDSAVVLSASGEKKTTKRKGLFSRLWNAIFRVRGDDFEKRLKNISKEEATVRN 72

Query: 68  RMSKRSRTWRRMCRNLIIFSVIFEVIAVSYAIMTTRSVDMNWKMRAIRVLPMFLLPALSS 127
           RM +RS T R   RNLI FSV FEVIAVSYAIMTTR  D++WK+R+ R+LPMFLLPA++ 
Sbjct: 73  RMKRRSITRRNFIRNLIAFSVFFEVIAVSYAIMTTRDEDLDWKLRSFRILPMFLLPAVAF 132

Query: 128 AAYSGFVSFTKICDRRDQKILDRLRAERQAKIDELKEKTNYYSTQQLIQRXXXXXXXXXX 187
             YS  V F ++CDRRDQ  L++L+AE   KI+ELKE+TNYY TQQLIQR          
Sbjct: 133 LLYSSLVGFWRMCDRRDQHTLEKLQAEMLGKINELKERTNYYITQQLIQRYDPDPAAKAA 192

Query: 188 XXXXXXXXXXXDSGLKVHMGDESKPNSATGKSNDIELVQSTGLRNRKQVHS---SPGTTT 244
                      +SGLKV +GDES+     GK+N      S GLRNRKQ ++   S  TT 
Sbjct: 193 AATVLASKLGAESGLKVFVGDESQLEPTAGKNN---AKHSGGLRNRKQTNTRGNSAETTP 249

Query: 245 TNFDEQQLVDSGGIDQTQTSEYNQLVVVEHQHPQSSTAQDGGWIARIAALLVGEDPTQS 303
            +  + +   SG  ++   +E NQ +V EH +PQ   A DG WI+RIAALLVGEDP+QS
Sbjct: 250 IHHSDNESNHSGTSERITGTEQNQQMVFEHYNPQEYAAHDGSWISRIAALLVGEDPSQS 308