Miyakogusa Predicted Gene

Lj1g3v1955040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1955040.1 Non Chatacterized Hit- tr|I1MWJ8|I1MWJ8_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,81.82,5e-18,DUF1218,Protein of unknown function DUF1218;
seg,NULL,CUFF.28198.1
         (197 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G31130.1 | Symbols:  | Protein of unknown function (DUF1218) ...   267   3e-72

>AT4G31130.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr4:15137159-15138465 REVERSE LENGTH=195
          Length = 195

 Score =  267 bits (683), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 126/172 (73%), Positives = 149/172 (86%), Gaps = 1/172 (0%)

Query: 1   MALTIKQMALIVSLFGVLSFIFGVVAENKKPASGTPVTGKDGVTSCKFSSDPTVVLGYLS 60
           MA+++KQM+L+VS  GVLSF+ GV+AENKKPASGTP++GK GV  CK+ SDPTV LGYLS
Sbjct: 1   MAVSMKQMSLVVSALGVLSFVLGVIAENKKPASGTPISGK-GVVICKYPSDPTVALGYLS 59

Query: 61  VAFLLASTVAGYRSLFYPYKGQSVPQGVFFKNTSFLVFFNIAVFSTGLAAAMLLWPTITE 120
            AFLLA TVAGY+SLF  YKG+SVP  V FK+TSF VFFNIA+ ++GLA ++LLWPTITE
Sbjct: 60  AAFLLACTVAGYKSLFISYKGKSVPNSVLFKSTSFSVFFNIALITSGLALSLLLWPTITE 119

Query: 121 QIHLTHKVHHELDYACPTAKTGLLGGGAFLSLDSCLFWLVALMLADNAREDY 172
           Q+HLT  VH  L+ +CPTAKTGLLGGGAF+SLDSCLFWLVALMLADNARED+
Sbjct: 120 QLHLTRNVHRNLETSCPTAKTGLLGGGAFVSLDSCLFWLVALMLADNAREDH 171