Miyakogusa Predicted Gene

Lj1g3v1943880.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1943880.1 tr|J7MPV6|J7MPV6_9CHLO Methylenetetrahydrofolate
reductase OS=Polytomella sp. Pringsheim 198.80
GN=m,53.16,8e-17,METHYLENETETRAHYDROFOLATE REDUCTASE,NULL;
METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE
RELA,gene.g32334.t1.1
         (83 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44160.1 | Symbols: MTHFR2 | methylenetetrahydrofolate reduct...   125   5e-30
AT3G59970.3 | Symbols: MTHFR1 | methylenetetrahydrofolate reduct...   125   5e-30
AT3G59970.2 | Symbols: MTHFR1 | methylenetetrahydrofolate reduct...   125   5e-30
AT3G59970.1 | Symbols: MTHFR1 | methylenetetrahydrofolate reduct...   125   5e-30

>AT2G44160.1 | Symbols: MTHFR2 | methylenetetrahydrofolate reductase
           2 | chr2:18262301-18265185 FORWARD LENGTH=594
          Length = 594

 Score =  125 bits (315), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 54/77 (70%), Positives = 69/77 (89%)

Query: 1   MDRMVAHNPSFCDICREDGRSTADLTLEIANKMQNILCVETMMHLTCINIPVDKVDNALH 60
           MDRMVA+ P+FCDI    G STADLTL+IA++MQN++CVE+MMHLTC N+PV+K+D+AL 
Sbjct: 38  MDRMVAYGPTFCDITWGAGGSTADLTLDIASRMQNVVCVESMMHLTCTNMPVEKIDHALE 97

Query: 61  TIKSHGLQNVLALRGDP 77
           TI+S+G+QNVLALRGDP
Sbjct: 98  TIRSNGIQNVLALRGDP 114


>AT3G59970.3 | Symbols: MTHFR1 | methylenetetrahydrofolate reductase
           1 | chr3:22151303-22154323 FORWARD LENGTH=592
          Length = 592

 Score =  125 bits (315), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 53/77 (68%), Positives = 69/77 (89%)

Query: 1   MDRMVAHNPSFCDICREDGRSTADLTLEIANKMQNILCVETMMHLTCINIPVDKVDNALH 60
           MDR+V++ P+FCDI    G STADLTLEIA++MQN++CVETMMHLTC N+P++K+D+AL 
Sbjct: 38  MDRLVSYGPTFCDITWGAGGSTADLTLEIASRMQNVICVETMMHLTCTNMPIEKIDHALE 97

Query: 61  TIKSHGLQNVLALRGDP 77
           TI+S+G+QNVLALRGDP
Sbjct: 98  TIRSNGIQNVLALRGDP 114


>AT3G59970.2 | Symbols: MTHFR1 | methylenetetrahydrofolate reductase
           1 | chr3:22151303-22153989 FORWARD LENGTH=407
          Length = 407

 Score =  125 bits (315), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 53/77 (68%), Positives = 69/77 (89%)

Query: 1   MDRMVAHNPSFCDICREDGRSTADLTLEIANKMQNILCVETMMHLTCINIPVDKVDNALH 60
           MDR+V++ P+FCDI    G STADLTLEIA++MQN++CVETMMHLTC N+P++K+D+AL 
Sbjct: 38  MDRLVSYGPTFCDITWGAGGSTADLTLEIASRMQNVICVETMMHLTCTNMPIEKIDHALE 97

Query: 61  TIKSHGLQNVLALRGDP 77
           TI+S+G+QNVLALRGDP
Sbjct: 98  TIRSNGIQNVLALRGDP 114


>AT3G59970.1 | Symbols: MTHFR1 | methylenetetrahydrofolate reductase
           1 | chr3:22151303-22153412 FORWARD LENGTH=421
          Length = 421

 Score =  125 bits (315), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 53/77 (68%), Positives = 69/77 (89%)

Query: 1   MDRMVAHNPSFCDICREDGRSTADLTLEIANKMQNILCVETMMHLTCINIPVDKVDNALH 60
           MDR+V++ P+FCDI    G STADLTLEIA++MQN++CVETMMHLTC N+P++K+D+AL 
Sbjct: 38  MDRLVSYGPTFCDITWGAGGSTADLTLEIASRMQNVICVETMMHLTCTNMPIEKIDHALE 97

Query: 61  TIKSHGLQNVLALRGDP 77
           TI+S+G+QNVLALRGDP
Sbjct: 98  TIRSNGIQNVLALRGDP 114