Miyakogusa Predicted Gene

Lj1g3v1943860.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1943860.2 Non Chatacterized Hit- tr|I1HCP4|I1HCP4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,41.07,0.000000000000003,FAMILY NOT NAMED,NULL,CUFF.28185.2
         (192 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G25580.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...   177   3e-45
AT1G18950.1 | Symbols:  | DDT domain superfamily | chr1:6546539-...   174   2e-44

>AT5G25580.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: DDT domain superfamily (TAIR:AT1G18950.1); Has 178
           Blast hits to 178 proteins in 75 species: Archae - 0;
           Bacteria - 4; Metazoa - 51; Fungi - 33; Plants - 60;
           Viruses - 1; Other Eukaryotes - 29 (source: NCBI BLink).
           | chr5:8903550-8906108 FORWARD LENGTH=405
          Length = 405

 Score =  177 bits (450), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 94/192 (48%), Positives = 129/192 (67%), Gaps = 9/192 (4%)

Query: 1   MPPVSKTLDDSDKWVTVLCTKLTMWWPWVAEGEIPLKQSKGEEISKYKELDPSDRLLLLK 60
           +PPV+KTLDD++ W+TVLC KL  WWPW+A+GEI +  +KGEEIS+Y+ LD  +RL +LK
Sbjct: 101 IPPVNKTLDDANAWITVLCKKLAPWWPWIAKGEIHITVNKGEEISEYQGLDSINRLKILK 160

Query: 61  ALCEVRADQHDAVSYINDALKEGTQVSSFRKDALGRDGAGTSYWYDANSKGQSHRLYKET 120
           ALCE+R  Q DA SYI +  KEG   SS RK  LG DG  TSYW+D N   Q +RLY+E 
Sbjct: 161 ALCELRVQQDDARSYIQENTKEGDWDSSLRKRKLGGDGKKTSYWFDGNDI-QGYRLYREV 219

Query: 121 ITMSRSSPKAKVKGCLPLPTINFHWETLASNLEEFSEVAEKFSSSMSTLEFNVGKKLQSD 180
             +S+ +  + +  CL        WET A+NL+EF  VA + SSS ++     G+ ++++
Sbjct: 220 NGISKKNAGSDL-SCLS-------WETEATNLDEFQSVARELSSSKASSLAATGQMIETE 271

Query: 181 AIPVLEKLQKKK 192
           AIPV+EK  KK+
Sbjct: 272 AIPVVEKYHKKR 283


>AT1G18950.1 | Symbols:  | DDT domain superfamily |
           chr1:6546539-6551549 FORWARD LENGTH=750
          Length = 750

 Score =  174 bits (442), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 86/192 (44%), Positives = 123/192 (64%), Gaps = 3/192 (1%)

Query: 1   MPPVSKTLDDSDKWVTVLCTKLTMWWPWVAEGEIPLKQSKGEEISKYKELDPSDRLLLLK 60
           +PPV++     D WVTVLC K+   W WVAEG++P+   +G EI  YK LDP+ R+++LK
Sbjct: 186 IPPVTRMALTRDTWVTVLCRKIRDCWHWVAEGDLPIVALQGREIEVYKNLDPAIRVVILK 245

Query: 61  ALCEVRADQHDAVSYINDALKEGTQVSSFRKDALGRDGAGTSYWYDANSKGQSHRLYKET 120
           ALC++R +Q D  SYI+++LK G  +S FRKD +G D  G ++WY+ +     HRLY+E 
Sbjct: 246 ALCDIRVEQEDIRSYIDNSLKTGVHLSVFRKDRVGGDSHGVNFWYEEDPL-IGHRLYRE- 303

Query: 121 ITMSRSSPKAKVKGCLPLPTINFHWETLASNLEEFSEVAEKFSSSMSTLEFNVGKKLQSD 180
                   K K KG   LP I + WET+A+N +EF +V+EK   S S +E ++GKKL  D
Sbjct: 304 -IRKAEVLKVKTKGSKILPNITYQWETVATNFDEFQDVSEKLLQSSSRIEVSLGKKLVKD 362

Query: 181 AIPVLEKLQKKK 192
            +P +EK  K+K
Sbjct: 363 MLPEIEKEHKRK 374