Miyakogusa Predicted Gene

Lj1g3v1931430.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1931430.2 Non Chatacterized Hit- tr|I3SC69|I3SC69_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,86.9,0,SYNTAXIN
5,NULL; SYNTAXIN,NULL; no description,NULL; SNARE,Target SNARE
coiled-coil domain; Syntaxin,CUFF.28213.2
         (344 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G24350.1 | Symbols: SYP32, ATSYP32 | syntaxin of plants  32 |...   320   1e-87
AT3G24350.2 | Symbols: SYP32 | syntaxin of plants  32 | chr3:883...   310   9e-85
AT5G05760.1 | Symbols: SYP31, ATSED5, ATSYP31, SED5 | syntaxin o...   134   1e-31

>AT3G24350.1 | Symbols: SYP32, ATSYP32 | syntaxin of plants  32 |
           chr3:8837733-8839402 FORWARD LENGTH=347
          Length = 347

 Score =  320 bits (819), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 182/329 (55%), Positives = 208/329 (63%), Gaps = 5/329 (1%)

Query: 1   MHVKSAQSSYRDRTHEFHSITERLKKXXXXXXXXXXXXXXXXXXXXXXXX-IAMQSEFNK 59
           M  +  QSSYRDR+ EF  I E L++                         +  +SEFNK
Sbjct: 1   MSARHGQSSYRDRSDEFFKIVETLRRSIAPAPAANNVPYGNNRNDGARREDLINKSEFNK 60

Query: 60  RASKIGYGIHQTSQXXXXXXXXXXRTSVFDDPTMEIQELTSVIKQDITALNSAVVDLQLL 119
           RAS IG  I+QTSQ          RTSVFDDPT EIQELT VIKQ+I+ALNSA+VDLQL 
Sbjct: 61  RASHIGLAINQTSQKLSKLAKLAKRTSVFDDPTQEIQELTVVIKQEISALNSALVDLQLF 120

Query: 120 SNSRNESGNXXXXXXXXXXXXXXX--LKTRLMGATKEFKDVLTMRTENMKVHESRRQLFS 177
            +S+N+ GN                 LK RLM  TKEFKDVLTMRTENMKVHESRRQLFS
Sbjct: 121 RSSQNDEGNNSRDRDKSTHSATVVDDLKYRLMDTTKEFKDVLTMRTENMKVHESRRQLFS 180

Query: 178 ASASKDSANPFVRQRPLXXXXXXXXXXXXXXXXXXXXQSSSQLFPKKQVDGESQPLLXXX 237
           ++ASK+S NPFVRQRPL                     SSSQL P K  +GES PLL   
Sbjct: 181 SNASKESTNPFVRQRPLAAKAAASESVPLPWANGSS-SSSSQLVPWKPGEGESSPLLQQS 239

Query: 238 XXXXXXXXX-IVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIRIDEN 296
                     +VPLQD+YMQ RAEAL  VESTIHELS+IF QLAT+VSQQGE+AIRID+N
Sbjct: 240 QQQQQQQQQQMVPLQDTYMQGRAEALHTVESTIHELSSIFTQLATMVSQQGEIAIRIDQN 299

Query: 297 MDDTLANVEGAQGALLKYMNSISSNRWLM 325
           M+DTLANVEGAQ  L +Y+NSISSNRWLM
Sbjct: 300 MEDTLANVEGAQSQLARYLNSISSNRWLM 328


>AT3G24350.2 | Symbols: SYP32 | syntaxin of plants  32 |
           chr3:8837733-8839402 FORWARD LENGTH=361
          Length = 361

 Score =  310 bits (794), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 182/343 (53%), Positives = 208/343 (60%), Gaps = 19/343 (5%)

Query: 1   MHVKSAQSSYRDRTHEFHSITERLKKXXXXXXXXXXXXXXXXXXXXXXXX-IAMQSEFNK 59
           M  +  QSSYRDR+ EF  I E L++                         +  +SEFNK
Sbjct: 1   MSARHGQSSYRDRSDEFFKIVETLRRSIAPAPAANNVPYGNNRNDGARREDLINKSEFNK 60

Query: 60  RASKIGYGIHQTSQXXXXXX--------------XXXXRTSVFDDPTMEIQELTSVIKQD 105
           RAS IG  I+QTSQ                        RTSVFDDPT EIQELT VIKQ+
Sbjct: 61  RASHIGLAINQTSQKLSKLAKRIRMVLRSRTDLFSVAKRTSVFDDPTQEIQELTVVIKQE 120

Query: 106 ITALNSAVVDLQLLSNSRNESGNXXXXXXXXXXXXXXX--LKTRLMGATKEFKDVLTMRT 163
           I+ALNSA+VDLQL  +S+N+ GN                 LK RLM  TKEFKDVLTMRT
Sbjct: 121 ISALNSALVDLQLFRSSQNDEGNNSRDRDKSTHSATVVDDLKYRLMDTTKEFKDVLTMRT 180

Query: 164 ENMKVHESRRQLFSASASKDSANPFVRQRPLXXXXXXXXXXXXXXXXXXXXQSSSQLFPK 223
           ENMKVHESRRQLFS++ASK+S NPFVRQRPL                     SSSQL P 
Sbjct: 181 ENMKVHESRRQLFSSNASKESTNPFVRQRPLAAKAAASESVPLPWANGSS-SSSSQLVPW 239

Query: 224 KQVDGESQPLLXXXXXXXXXXXX-IVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATL 282
           K  +GES PLL             +VPLQD+YMQ RAEAL  VESTIHELS+IF QLAT+
Sbjct: 240 KPGEGESSPLLQQSQQQQQQQQQQMVPLQDTYMQGRAEALHTVESTIHELSSIFTQLATM 299

Query: 283 VSQQGEVAIRIDENMDDTLANVEGAQGALLKYMNSISSNRWLM 325
           VSQQGE+AIRID+NM+DTLANVEGAQ  L +Y+NSISSNRWLM
Sbjct: 300 VSQQGEIAIRIDQNMEDTLANVEGAQSQLARYLNSISSNRWLM 342


>AT5G05760.1 | Symbols: SYP31, ATSED5, ATSYP31, SED5 | syntaxin of
           plants 31 | chr5:1729111-1730903 REVERSE LENGTH=336
          Length = 336

 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 99/177 (55%), Gaps = 5/177 (2%)

Query: 8   SSYRDRTHEFHSITERLKKXXXXXXXXXXXXXXXXXXXXXXXXIAMQSEFNKRASKIGYG 67
           S++RDRT E HS+++ LKK                            SEFNK+AS+IG G
Sbjct: 3   STFRDRTVELHSLSQTLKKIGAIPSVHQDEDDPASSKRSSPG-----SEFNKKASRIGLG 57

Query: 68  IHQTSQXXXXXXXXXXRTSVFDDPTMEIQELTSVIKQDITALNSAVVDLQLLSNSRNESG 127
           I +TSQ          ++++F+D T+EIQELT +I+ DIT LN A+ DLQ L N     G
Sbjct: 58  IKETSQKITRLAKLAKQSTIFNDRTVEIQELTVLIRNDITGLNMALSDLQTLQNMELADG 117

Query: 128 NXXXXXXXXXXXXXXXLKTRLMGATKEFKDVLTMRTENMKVHESRRQLFSASASKDS 184
           N               LKTRLMGATK+ +DVLT R+ENMK HE+R+QLFS   + DS
Sbjct: 118 NYSQDQVGHYTAVCDDLKTRLMGATKQLQDVLTTRSENMKAHENRKQLFSTKNAVDS 174



 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 53/78 (67%), Positives = 66/78 (84%)

Query: 248 VPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIRIDENMDDTLANVEGA 307
           VP Q++Y QSRA AL +VES I ELS IF QLAT+V+QQGE+AIRID+NMD++L NVEGA
Sbjct: 240 VPKQENYSQSRAVALHSVESRITELSGIFPQLATMVTQQGELAIRIDDNMDESLVNVEGA 299

Query: 308 QGALLKYMNSISSNRWLM 325
           + ALL+++  ISSNRWLM
Sbjct: 300 RSALLQHLTRISSNRWLM 317