Miyakogusa Predicted Gene

Lj1g3v1931430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1931430.1 Non Chatacterized Hit- tr|I3SC69|I3SC69_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.84,0,SYNTAXIN
5,NULL; SYNTAXIN,NULL; no description,NULL; SNARE,Target SNARE
coiled-coil domain; Syntaxin,CUFF.28213.1
         (345 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G24350.1 | Symbols: SYP32, ATSYP32 | syntaxin of plants  32 |...   324   4e-89
AT3G24350.2 | Symbols: SYP32 | syntaxin of plants  32 | chr3:883...   315   3e-86
AT5G05760.1 | Symbols: SYP31, ATSED5, ATSYP31, SED5 | syntaxin o...   213   1e-55

>AT3G24350.1 | Symbols: SYP32, ATSYP32 | syntaxin of plants  32 |
           chr3:8837733-8839402 FORWARD LENGTH=347
          Length = 347

 Score =  324 bits (831), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 185/330 (56%), Positives = 214/330 (64%), Gaps = 10/330 (3%)

Query: 2   KSAQSSFRDRTHEFQNIAERLKKSGSGPNGPXXXXXXXXXXXXXXXXXXXXXMQSEFNKR 61
           +  QSS+RDR+ EF  I E L++S +    P                      +SEFNKR
Sbjct: 4   RHGQSSYRDRSDEFFKIVETLRRSIAP--APAANNVPYGNNRNDGARREDLINKSEFNKR 61

Query: 62  ASKIGYGIHXXXXXXXXXXXXXXXXXVFDDPTMEIQELTSVIKQDITALNSAVVDLQLVS 121
           AS IG  I+                 VFDDPT EIQELT VIKQ+I+ALNSA+VDLQL  
Sbjct: 62  ASHIGLAINQTSQKLSKLAKLAKRTSVFDDPTQEIQELTVVIKQEISALNSALVDLQLFR 121

Query: 122 NSRNESGNASAD--TTSHSFTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQLFSS 179
           +S+N+ GN S D   ++HS TVVDDLK RLM TTKEFKDVLTMRTEN+KVHE+RRQLFSS
Sbjct: 122 SSQNDEGNNSRDRDKSTHSATVVDDLKYRLMDTTKEFKDVLTMRTENMKVHESRRQLFSS 181

Query: 180 SASKESANPFVRQRPLATRTAASESNAPAPPWAXXXXXXXXXQLFPKKQVDGESX---XX 236
           +ASKES NPFVRQRPLA + AASES  P P WA         QL P K  +GES      
Sbjct: 182 NASKESTNPFVRQRPLAAKAAASES-VPLP-WANGSSSSSS-QLVPWKPGEGESSPLLQQ 238

Query: 237 XXXXXXXXXXXXXXXXDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIRIDE 296
                           D+YMQ RAEAL  VESTIHELS+IF QLAT+VSQQGE+AIRID+
Sbjct: 239 SQQQQQQQQQQMVPLQDTYMQGRAEALHTVESTIHELSSIFTQLATMVSQQGEIAIRIDQ 298

Query: 297 NMDDTLANVEGAQGALLKYMNSISSNRWLM 326
           NM+DTLANVEGAQ  L +Y+NSISSNRWLM
Sbjct: 299 NMEDTLANVEGAQSQLARYLNSISSNRWLM 328


>AT3G24350.2 | Symbols: SYP32 | syntaxin of plants  32 |
           chr3:8837733-8839402 FORWARD LENGTH=361
          Length = 361

 Score =  315 bits (807), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 185/344 (53%), Positives = 214/344 (62%), Gaps = 24/344 (6%)

Query: 2   KSAQSSFRDRTHEFQNIAERLKKSGSGPNGPXXXXXXXXXXXXXXXXXXXXXMQSEFNKR 61
           +  QSS+RDR+ EF  I E L++S +    P                      +SEFNKR
Sbjct: 4   RHGQSSYRDRSDEFFKIVETLRRSIAP--APAANNVPYGNNRNDGARREDLINKSEFNKR 61

Query: 62  ASKIGYGIHXXXXXXXXXXX--------------XXXXXXVFDDPTMEIQELTSVIKQDI 107
           AS IG  I+                               VFDDPT EIQELT VIKQ+I
Sbjct: 62  ASHIGLAINQTSQKLSKLAKRIRMVLRSRTDLFSVAKRTSVFDDPTQEIQELTVVIKQEI 121

Query: 108 TALNSAVVDLQLVSNSRNESGNASAD--TTSHSFTVVDDLKTRLMSTTKEFKDVLTMRTE 165
           +ALNSA+VDLQL  +S+N+ GN S D   ++HS TVVDDLK RLM TTKEFKDVLTMRTE
Sbjct: 122 SALNSALVDLQLFRSSQNDEGNNSRDRDKSTHSATVVDDLKYRLMDTTKEFKDVLTMRTE 181

Query: 166 NLKVHENRRQLFSSSASKESANPFVRQRPLATRTAASESNAPAPPWAXXXXXXXXXQLFP 225
           N+KVHE+RRQLFSS+ASKES NPFVRQRPLA + AASES  P P WA         QL P
Sbjct: 182 NMKVHESRRQLFSSNASKESTNPFVRQRPLAAKAAASES-VPLP-WANGSSSSSS-QLVP 238

Query: 226 KKQVDGESX---XXXXXXXXXXXXXXXXXXDSYMQSRAEALQNVESTIHELSNIFNQLAT 282
            K  +GES                      D+YMQ RAEAL  VESTIHELS+IF QLAT
Sbjct: 239 WKPGEGESSPLLQQSQQQQQQQQQQMVPLQDTYMQGRAEALHTVESTIHELSSIFTQLAT 298

Query: 283 LVSQQGEVAIRIDENMDDTLANVEGAQGALLKYMNSISSNRWLM 326
           +VSQQGE+AIRID+NM+DTLANVEGAQ  L +Y+NSISSNRWLM
Sbjct: 299 MVSQQGEIAIRIDQNMEDTLANVEGAQSQLARYLNSISSNRWLM 342


>AT5G05760.1 | Symbols: SYP31, ATSED5, ATSYP31, SED5 | syntaxin of
           plants 31 | chr5:1729111-1730903 REVERSE LENGTH=336
          Length = 336

 Score =  213 bits (543), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/340 (40%), Positives = 181/340 (53%), Gaps = 44/340 (12%)

Query: 6   SSFRDRTHEFQNIAERLKKSGSGPNGPXXXXXXXXXXXXXXXXXXXXXMQSEFNKRASKI 65
           S+FRDRT E  ++++ LKK G+ P+                         SEFNK+AS+I
Sbjct: 3   STFRDRTVELHSLSQTLKKIGAIPS--------VHQDEDDPASSKRSSPGSEFNKKASRI 54

Query: 66  GYGIHXXXXXXXXXXXXXXXXXVFDDPTMEIQELTSVIKQDITALNSAVVDLQLVSNSRN 125
           G GI                  +F+D T+EIQELT +I+ DIT LN A+ DLQ + N   
Sbjct: 55  GLGIKETSQKITRLAKLAKQSTIFNDRTVEIQELTVLIRNDITGLNMALSDLQTLQNMEL 114

Query: 126 ESGNASADTTSHSFTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQLFSSSASKES 185
             GN S D   H   V DDLKTRLM  TK+ +DVLT R+EN+K HENR+QLFS+  + +S
Sbjct: 115 ADGNYSQDQVGHYTAVCDDLKTRLMGATKQLQDVLTTRSENMKAHENRKQLFSTKNAVDS 174

Query: 186 ------------------ANPFVR-QRPLATRTAASESNAPAPPWAXXXXXXXXXQLFPK 226
                             +NPF   Q+PL         N  APP +            P 
Sbjct: 175 PPQNNAKSVPEPPPWSSSSNPFGNLQQPL-----LPPLNTGAPPGSQLRRRSAIENA-PS 228

Query: 227 KQVDGESXXXXXXXXXXXXXXXXXXXDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQ 286
           +Q++                      ++Y QSRA AL +VES I ELS IF QLAT+V+Q
Sbjct: 229 QQME-----------MSLLQQTVPKQENYSQSRAVALHSVESRITELSGIFPQLATMVTQ 277

Query: 287 QGEVAIRIDENMDDTLANVEGAQGALLKYMNSISSNRWLM 326
           QGE+AIRID+NMD++L NVEGA+ ALL+++  ISSNRWLM
Sbjct: 278 QGELAIRIDDNMDESLVNVEGARSALLQHLTRISSNRWLM 317