Miyakogusa Predicted Gene

Lj1g3v1931390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1931390.1 Non Chatacterized Hit- tr|D7SUI6|D7SUI6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,46,0.00000000000002,seg,NULL,CUFF.28181.1
         (301 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G11450.1 | Symbols:  | Mog1/PsbP/DUF1795-like photosystem II ...   330   1e-90

>AT5G11450.1 | Symbols:  | Mog1/PsbP/DUF1795-like photosystem II
           reaction center PsbP family protein |
           chr5:3654475-3656357 FORWARD LENGTH=297
          Length = 297

 Score =  330 bits (845), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 163/252 (64%), Positives = 195/252 (77%), Gaps = 8/252 (3%)

Query: 57  TSQNWILRRDLMVSALTSVSLTSGLLQSPVTLAEE-------EPNMATFVDETNAYSYMY 109
           +S+  + RRDL++  L+S       L SPVT AEE       E  M T VD+ NAYSY Y
Sbjct: 47  SSEKGLSRRDLVLIGLSSPLSMFLPLSSPVTHAEEDVKMSGEELKMGTMVDDINAYSYAY 106

Query: 110 PLEVPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIIDNVLISVTIGPPNPGL 169
           PL+ PS+K VFKWVESRKPERYSSAAPLSP+ARLRIVSERVD+ DN++IS++IGPPN  L
Sbjct: 107 PLDYPSEKLVFKWVESRKPERYSSAAPLSPDARLRIVSERVDLTDNLVISISIGPPNSRL 166

Query: 170 VKLNDKKKWTAKDVADSVLADKSTLRVTSSQRLSESSVLDTHTGEIDGEPYWYYEYLVRK 229
               +KK W+AK+VADSVL+DKS LRVTSSQRL ESSVLD H  +IDGEPYWYYEYLVRK
Sbjct: 167 TS-KEKKTWSAKEVADSVLSDKSALRVTSSQRLEESSVLDAHASDIDGEPYWYYEYLVRK 225

Query: 230 SPTNLAGEPNIFRHYLASTAERDGYLYSVSVSALSPQWKTMGPYLEKTVSSFRLISPTEN 289
           SPT +A    ++RHY++STAERDGYLY+++ S L  QW  MGP LE+ V SFRL+ PT++
Sbjct: 226 SPTKIAEASKLYRHYISSTAERDGYLYTINASTLGKQWDKMGPVLERAVGSFRLLPPTDS 285

Query: 290 YVPPYKDPWRFW 301
           YVPPYKDPWRFW
Sbjct: 286 YVPPYKDPWRFW 297