Miyakogusa Predicted Gene
- Lj1g3v1878490.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1878490.1 Non Chatacterized Hit- tr|I1K8T2|I1K8T2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,90.87,0,meprin and
TRAF homology,MATH; TRAF domain-like,TRAF-like; MATH,MATH; SUBFAMILY
NOT NAMED,NULL; FAMI,CUFF.28096.1
(1565 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G25320.1 | Symbols: | TRAF-like family protein | chr2:107819... 2227 0.0
AT2G25330.1 | Symbols: | TRAF-like family protein | chr2:107889... 872 0.0
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 91 6e-18
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 91 6e-18
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 90 1e-17
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 90 1e-17
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 90 1e-17
AT3G58210.1 | Symbols: | TRAF-like family protein | chr3:215626... 86 3e-16
AT3G58290.1 | Symbols: | TRAF-like superfamily protein | chr3:2... 79 3e-14
AT3G58340.1 | Symbols: | TRAF-like family protein | chr3:215890... 78 4e-14
AT5G26260.1 | Symbols: | TRAF-like family protein | chr5:920049... 73 1e-12
AT3G17380.1 | Symbols: | TRAF-like family protein | chr3:595024... 70 8e-12
AT3G58250.1 | Symbols: | TRAF-like family protein | chr3:215707... 69 3e-11
AT3G58200.1 | Symbols: | TRAF-like family protein | chr3:215600... 69 4e-11
AT3G58410.1 | Symbols: | TRAF-like family protein | chr3:216048... 67 8e-11
AT3G58360.1 | Symbols: | TRAF-like family protein | chr3:215935... 66 2e-10
AT3G58260.1 | Symbols: | TRAF-like family protein | chr3:215737... 65 3e-10
AT3G58270.2 | Symbols: | Arabidopsis phospholipase-like protein... 62 2e-09
AT3G58270.1 | Symbols: | Arabidopsis phospholipase-like protein... 62 2e-09
AT5G43560.2 | Symbols: | TRAF-like superfamily protein | chr5:1... 62 3e-09
AT5G43560.1 | Symbols: | TRAF-like superfamily protein | chr5:1... 62 3e-09
AT1G31390.1 | Symbols: | TRAF-like family protein | chr1:112431... 62 3e-09
AT5G26280.1 | Symbols: | TRAF-like family protein | chr5:920872... 62 4e-09
AT1G04300.1 | Symbols: | TRAF-like superfamily protein | chr1:1... 62 4e-09
AT2G04190.1 | Symbols: | TRAF-like family protein | chr2:142759... 61 6e-09
AT2G04170.4 | Symbols: | TRAF-like family protein | chr2:141740... 59 2e-08
AT2G04170.3 | Symbols: | TRAF-like family protein | chr2:141740... 59 2e-08
AT2G04170.2 | Symbols: | TRAF-like family protein | chr2:141740... 59 3e-08
AT2G04170.1 | Symbols: | TRAF-like family protein | chr2:141740... 59 3e-08
AT2G05420.1 | Symbols: | TRAF-like family protein | chr2:198390... 59 3e-08
AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology domain... 59 4e-08
AT3G58220.2 | Symbols: | TRAF-like family protein | chr3:215646... 58 4e-08
AT3G44790.1 | Symbols: | TRAF-like family protein | chr3:163287... 58 7e-08
AT5G52330.1 | Symbols: | TRAF-like superfamily protein | chr5:2... 57 1e-07
AT1G04300.3 | Symbols: | TRAF-like superfamily protein | chr1:1... 56 2e-07
AT1G31400.1 | Symbols: | TRAF-like family protein | chr1:112452... 56 2e-07
AT5G26320.1 | Symbols: | TRAF-like family protein | chr5:923831... 56 2e-07
AT2G04170.5 | Symbols: | TRAF-like family protein | chr2:141766... 56 2e-07
AT3G58350.1 | Symbols: RTM3 | RESTRICTED TEV MOVEMENT 3 | chr3:2... 54 6e-07
AT3G58220.1 | Symbols: | TRAF-like family protein | chr3:215651... 54 8e-07
AT5G26280.2 | Symbols: | TRAF-like family protein | chr5:920872... 54 9e-07
AT1G69660.1 | Symbols: | TRAF-like family protein | chr1:261996... 54 9e-07
AT1G04300.4 | Symbols: | TRAF-like superfamily protein | chr1:1... 54 1e-06
AT4G09770.2 | Symbols: | TRAF-like family protein | chr4:615453... 53 1e-06
AT4G09770.1 | Symbols: | TRAF-like family protein | chr4:615453... 53 1e-06
AT2G42480.1 | Symbols: | TRAF-like family protein | chr2:176858... 52 3e-06
AT4G09780.1 | Symbols: | TRAF-like family protein | chr4:615953... 52 5e-06
AT5G26290.1 | Symbols: | TRAF-like family protein | chr5:922607... 51 5e-06
AT3G28220.1 | Symbols: | TRAF-like family protein | chr3:105244... 51 7e-06
>AT2G25320.1 | Symbols: | TRAF-like family protein |
chr2:10781951-10788065 REVERSE LENGTH=1673
Length = 1673
Score = 2227 bits (5770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1096/1567 (69%), Positives = 1253/1567 (79%), Gaps = 22/1567 (1%)
Query: 1 MDPRGTSSSKWDCFASYRLAIVNLVDDSKSIHRDSWHRFSSKKKSHGWCDFTPSSTVFDP 60
MDPRGT+SS+WDCFASYRL+IVNLVDDS +IH+DSWHRFSSKKKSHGWCDFT +S++ DP
Sbjct: 124 MDPRGTTSSRWDCFASYRLSIVNLVDDSLTIHKDSWHRFSSKKKSHGWCDFTLNSSILDP 183
Query: 61 KLGYLFNTDSVLITADILILNESVSFSRDNNELQXXXXXXXXXXXXXXXXXXXXXXXXXK 120
K+G+LFN DS+LITADILILNESVSFSRDNN K
Sbjct: 184 KMGFLFNNDSLLITADILILNESVSFSRDNNN------EGQSLYKENSIAGPMPDVLSGK 237
Query: 121 FTWKVHNFSLFKDMIRTQKIMSPVFPAGECNLRISVYQSTVNGVDHLSMCLESKDTDKTA 180
FTWKV+NFSLFKDMI+TQKIMSPVFPAGECNLRISVYQS VN +++SMCLESK+T+KT
Sbjct: 238 FTWKVNNFSLFKDMIKTQKIMSPVFPAGECNLRISVYQSVVNSQEYISMCLESKETEKTL 297
Query: 181 ALSDRSCWCLFRMSVLNQKPGSNHTHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFVGSD 240
+SDRSCWCLFRMS LNQKPG H HRDSYGRFAADNKSGDNTSLGWNDYMKMS+FV +
Sbjct: 298 -VSDRSCWCLFRMSALNQKPGCTHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSEFVNPE 356
Query: 241 SGFLVDDTAVFSTSFHVIKEFSSFSKNGAVIAGRSGSGARKSDGHIGKFTWRIENFTRLK 300
+GFL+DD AVFSTSFHVIKEFSSF+KNG +I GR+G+GARKSDGH+GKFTWRIENFTRLK
Sbjct: 357 AGFLLDDMAVFSTSFHVIKEFSSFTKNGGLIGGRNGAGARKSDGHMGKFTWRIENFTRLK 416
Query: 301 DLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLEVTDSRNTSSDWSCF 360
DLLKKRKITGLCIKS+RFQIGNRDCRLIVYPRGQS PPCHLS FLEVTDSR +SSDWSCF
Sbjct: 417 DLLKKRKITGLCIKSKRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSR-SSSDWSCF 475
Query: 361 VSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSA 420
VSHRLSVVNQR+E+KSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTV+FSA
Sbjct: 476 VSHRLSVVNQRLEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSA 535
Query: 421 EVLILKETSIMQDFAEHDXXXXXXXXXXXXXXXXXXFTWKVENFLSFKDIMETRKIFSKF 480
EVLILKETS +++ E D FTWKVENFL+FK+IMETRKIFSKF
Sbjct: 536 EVLILKETSATKEYVEADSTNSVSPTDNSVKKSS--FTWKVENFLAFKEIMETRKIFSKF 593
Query: 481 FQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVRYRMAVVNQKNPAKTVWKESS 540
FQAGGCELRIGVYESFDTICIYLESDQ+ G+D D NFWV+Y+M ++NQKNPAK+VWKESS
Sbjct: 594 FQAGGCELRIGVYESFDTICIYLESDQSAGTDVDNNFWVKYKMGILNQKNPAKSVWKESS 653
Query: 541 ICTKTWNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEILDCCPWFEFSDLEVLASEDDQD 600
ICTKTWNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEILDCCPWFEFSDLEVLAS+DDQD
Sbjct: 654 ICTKTWNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEILDCCPWFEFSDLEVLASDDDQD 713
Query: 601 ALTTDPXXXXXXXXXXXXXXXXXXXFRNLLSRAGFHLTYGDNPSQPQVTLREKLLMDAGA 660
ALTTDP FR+ LSRAGFHLT+G+NPSQPQVTLREKLLMDAGA
Sbjct: 714 ALTTDPDEIIDSEESEGISGDEEDTFRDFLSRAGFHLTFGENPSQPQVTLREKLLMDAGA 773
Query: 661 IAGFLTGLRVYLDDPAKVKRLLLPTKLSGSCDGKKTTKADESSPSLMNLLMGVKVLQQAI 720
IAGFLTGLRVYLDDP KVKRLLLPTK+S + D K K+DESSPSLMNLLMGVKVLQQAI
Sbjct: 774 IAGFLTGLRVYLDDPTKVKRLLLPTKISCN-DRSKLIKSDESSPSLMNLLMGVKVLQQAI 832
Query: 721 VDLLLDIMVECCQPSEVGPVSDSVDACAKPSPDTNGAASPLVCDRENRVAKSAQTPVHER 780
+DLLLDIMVECCQPSE G S S + P D AA+ RE A+ +Q V ER
Sbjct: 833 IDLLLDIMVECCQPSEEG--SHSEPSLLSPKTDGCVAATSSESTRERGAAEPSQHLVDER 890
Query: 781 LDXXXXXXXXXXXXXXXDLNSNGIQEKALPGQPTCPPETSAASSENASFRSKTKWPEQSE 840
++N + EKAL +P PP TSA S +AS +SKTKWPEQSE
Sbjct: 891 FKSDTDATLSTSAVPSSEMNGIDLLEKALAIEPMSPPTTSAGQSSDASVQSKTKWPEQSE 950
Query: 841 ELLGLIVNSLRALDGAVPQGCPEPRRRPQSAQKIALVLDKAPKHLQADLVALVPKLVEQS 900
ELLGLIVNSL+ LD AVPQGCPEPRRRP SAQKIALVLD+APKHLQ DLV+LVPKLVE S
Sbjct: 951 ELLGLIVNSLKTLDAAVPQGCPEPRRRPHSAQKIALVLDRAPKHLQPDLVSLVPKLVEHS 1010
Query: 901 EHPVAACALLERLQKPDAEPALRIPVFGALSQLECGSEVWERILFQSFELLTDSNEEPLT 960
EHP+AA AL+ERLQKP+AEPALR PV+ ALSQLEC SEVWE IL QSFELL+D NEE L
Sbjct: 1011 EHPLAALALIERLQKPEAEPALREPVYNALSQLECDSEVWEDILSQSFELLSDLNEESLV 1070
Query: 961 ATIDFIFKAASQCQHLSEAVRSVRVRLKNLGLEVSPCVLDFLSKTINSWGDVAETILRDI 1020
A I F FK ASQCQHL EAV +VR RLK+LG +VS CVLD+LSKT++SW +AE ILRDI
Sbjct: 1071 AAIHFTFKTASQCQHLPEAVNAVRERLKSLGADVSLCVLDYLSKTVHSWPGIAEMILRDI 1130
Query: 1021 DCDDDYGDSFPALPCGIFVFGEHGSAPTGVHVVDEQTFRASRHFSDIYILFEMLSIPCLA 1080
+ DD G +F LPCG F+ GE+ +A +++E F A+R F D+YIL EMLSI CLA
Sbjct: 1131 NTDDSVGANFATLPCGPFLIGENETASEMADLMEEHIFYANRQFFDVYILLEMLSISCLA 1190
Query: 1081 VEASQTFERAVARGAIGAQSVALVLESRLSQRLNNNARFISENFQHSDGATEVDACEQLG 1140
EASQTFERAVARGAI AQ+VA+VLE + Q N NA + +H D E +A EQ
Sbjct: 1191 EEASQTFERAVARGAIVAQAVAMVLEKQRVQSPNLNATSGDASLKHQDPVLEGEASEQPA 1250
Query: 1141 VQRDDFTSVLGLAETLALSRDPCVKEFVKLLYMILFRWYANESYRGRMLKRLVDRATSTS 1200
+F +L LAETL SRDP V+ FVK+LY ILF+W+ ++ +R ++L+RLVDR TS +
Sbjct: 1251 TGGTEFRIILNLAETLTHSRDPQVRGFVKMLYTILFKWFPDQPFRVQILRRLVDRFTSPT 1310
Query: 1201 DNGREVDFDLDILVTLVCEEQEIIRPVLSMMREVAELANVDRAALWHQLCXXXXXXXXXX 1260
+ ++D +L+IL L+ +EQE+ RPVL+M+++V E AN+DRAALWHQL
Sbjct: 1311 SSSHDLDLELEILAILIFQEQEVARPVLAMLKKVVEHANIDRAALWHQLRANKEELVRLK 1370
Query: 1261 XXXKTEISNMAKEKATISQKLSESEATSNRLKSEMRAELDRFSREKKELTEQVQEIESQL 1320
K EI +M KEK++I+QKLSESEA + RLKSEM+AE DRFSREKK+L EQ +++ESQL
Sbjct: 1371 EEKKIEIQSMTKEKSSITQKLSESEAANTRLKSEMKAEADRFSREKKDLVEQFRDVESQL 1430
Query: 1321 EWLRSERDDEKVKLSAEKKVLQDRLHDADTQLSQLKSRKRDELKKVVKEKNALAERLKNA 1380
EW+RSER DE KLS+EKK L DRLH+A+TQL+ K+RKRDELKKV KEKNAL E+LK
Sbjct: 1431 EWIRSERQDEIDKLSSEKKTLLDRLHEAETQLALQKTRKRDELKKVGKEKNALTEKLKVT 1490
Query: 1381 EAARKRFDEELKRFATENVTREEIRQSLEDEVRRLTQTVGQTEGEKREKEEQIARCEAYI 1440
EAARKRF+EELKR+ATENVTREE+R+SLED++R+LTQTVGQT+ EKREKE+QIARCEAYI
Sbjct: 1491 EAARKRFEEELKRYATENVTREELRKSLEDQIRQLTQTVGQTKEEKREKEDQIARCEAYI 1550
Query: 1441 DGMESKLQACQQYIHTLEHSLQEEMSRHAPLYGAGLEALSMKELETISRIHEEGLRQIHA 1500
DGMESKLQACQQYIHTLE SL+EE+SRHAPLYGA LE+LSMKEL+TI+RIHEEGLRQIHA
Sbjct: 1551 DGMESKLQACQQYIHTLESSLREEISRHAPLYGANLESLSMKELDTIARIHEEGLRQIHA 1610
Query: 1501 LQQRKGSPAGSPLLTPHAHPHNHGLYPAAS---PPMAVGLPPSIIPNGVGIHSNGHVNGA 1557
LQQRKG H P H LYP PPMA+GLPP +IPNG G+HSNGH+NG+
Sbjct: 1611 LQQRKGHTLS------HGLPQGHTLYPTTPPQLPPMAIGLPPQLIPNGSGVHSNGHINGS 1664
Query: 1558 VGPWFNH 1564
V PWF+H
Sbjct: 1665 VRPWFSH 1671
Score = 167 bits (422), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 176/330 (53%), Gaps = 34/330 (10%)
Query: 270 VIAGRSGSGARKSDGHI---GKFT----WRIENFTRLKDLLKKRKITGLCIKSRRFQIGN 322
V + R GSG + + G+++ W +E+FTR+K + S+ F +G
Sbjct: 47 VGSSRDGSGGAQEIVAVDRPGEYSALCRWTVESFTRVK---------AKALWSKYFDVGG 97
Query: 323 RDCRLIVYPRGQSHP-PCHLSAFLEVTDSR-NTSSDWSCFVSHRLSVVNQRMEDKSVTKE 380
DCRL+VYPRG S P ++S +L++ D R TSS W CF S+RLS+VN + ++ K+
Sbjct: 98 YDCRLLVYPRGDSQALPGYISIYLQIMDPRGTTSSRWDCFASYRLSIVNLVDDSLTIHKD 157
Query: 381 SQNRYSKAAKDWGWREFVTLTSLFDQDSGFLV-QDTVIFSAEVLILKET-SIMQDFAEHD 438
S +R+S K GW +F +S+ D GFL D+++ +A++LIL E+ S +D
Sbjct: 158 SWHRFSSKKKSHGWCDFTLNSSILDPKMGFLFNNDSLLITADILILNESVSFSRDNNNEG 217
Query: 439 XXXXXXXXXXXXX--XXXXXFTWKVENFLSFKDIMETRKIFSKFFQAGGCELRIGVYESF 496
FTWKV NF FKD+++T+KI S F AG C LRI VY+S
Sbjct: 218 QSLYKENSIAGPMPDVLSGKFTWKVNNFSLFKDMIKTQKIMSPVFPAGECNLRISVYQSV 277
Query: 497 ----DTICIYLESDQAVGS-DPDKNFWVRYRMAVVNQKNPAKTVWKES----SICTKTWN 547
+ I + LES + + D++ W +RM+ +NQK + ++S + K+ +
Sbjct: 278 VNSQEYISMCLESKETEKTLVSDRSCWCLFRMSALNQKPGCTHMHRDSYGRFAADNKSGD 337
Query: 548 NSVL---QFMKVSDMLEADAGFLVRDTVVF 574
N+ L +MK+S+ + +AGFL+ D VF
Sbjct: 338 NTSLGWNDYMKMSEFVNPEAGFLLDDMAVF 367
>AT2G25330.1 | Symbols: | TRAF-like family protein |
chr2:10788946-10791331 REVERSE LENGTH=693
Length = 693
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/606 (70%), Positives = 490/606 (80%), Gaps = 30/606 (4%)
Query: 1 MDPRGTSSSKWDCFASYRLAIVNLVDDSKSIHRDSWHRFSSKKKSHGWCDFTPSSTVFDP 60
+DPRGTSSS WDCFASY+L+I+N VDDS +I ++SWHRFS+KK+SHGWCDFT +S+V DP
Sbjct: 99 IDPRGTSSSLWDCFASYQLSIINHVDDSLTIRKNSWHRFSNKKRSHGWCDFTLNSSVLDP 158
Query: 61 KLGYLFNTDSVLITADILILNESVSFSRDNNELQXXXXXXXXXXXXXXXXXXXXXXXXXK 120
K+G+LFN DS+LITADI+ILNESVSFS DNN
Sbjct: 159 KMGFLFNNDSLLITADIMILNESVSFSIDNNN--------------ESVVGSMTDVLSGT 204
Query: 121 FTWKVHNFSLFKDMIRTQKIMSPVFPAGECNLRISVYQSTVNGVDHLSMCLESKDTDKTA 180
FTW V NFS+FK+MI+TQKI SPVF AGEC LRI VYQS VN ++ SMCL+S DT+K +
Sbjct: 205 FTWTVENFSMFKEMIKTQKITSPVFVAGECFLRIGVYQSVVNAQEYFSMCLDSTDTEK-S 263
Query: 181 ALSDRSCWCLFRMSVLNQKPGSNHTHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFVGSD 240
LSD+S WCLF MS LNQK G + +++SYGRFAADNKSGDNT LGWNDYMKMSDFV D
Sbjct: 264 VLSDKSSWCLFSMSALNQKHGCTNMNKESYGRFAADNKSGDNTGLGWNDYMKMSDFVNPD 323
Query: 241 SGFLVDDTAVFSTSFHVIKEFSSFSKNGAVIAGRSGSGARKSDGHIGKFTWRIENFTRLK 300
+G+L+DD AVFSTSF VIKEFSSF+KNG +G++GKF+WRIENFT L
Sbjct: 324 AGYLLDDKAVFSTSFDVIKEFSSFTKNGT------------GNGYMGKFSWRIENFTSLV 371
Query: 301 DLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLEVTDSRNTSSDWSCF 360
DLL+KRKITGL IKS+RFQIGNRDCRLIVYPRGQS PP HLS FLEVTDSR++SSDWSCF
Sbjct: 372 DLLEKRKITGLYIKSKRFQIGNRDCRLIVYPRGQSQPPSHLSIFLEVTDSRSSSSDWSCF 431
Query: 361 VSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSA 420
VSHRLSVVNQR E+KSVTKESQNR+SKA KDWGWREFVTLTSLFDQDSGFLVQD+V+FS
Sbjct: 432 VSHRLSVVNQRSEEKSVTKESQNRFSKAEKDWGWREFVTLTSLFDQDSGFLVQDSVVFSV 491
Query: 421 EVLILKETSIMQDFAEHDXXXXXXXXXXXXXXXXXXFTWKVENFLSFKDIMETRKIFSKF 480
EVL+LKETS+ +D+ E + FTWKVENFL+FK IME RKIFSKF
Sbjct: 492 EVLMLKETSLTKDYTEAESASSVSQIDKTVKSS---FTWKVENFLAFKGIMEKRKIFSKF 548
Query: 481 FQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVRYRMAVVNQKNPAKTVWKESS 540
FQAGGCELRIGVYESFDTICIYLES Q+ G+D D N WV+Y+M ++NQKNPAK+VWKESS
Sbjct: 549 FQAGGCELRIGVYESFDTICIYLESGQSAGNDVDNNLWVKYKMGILNQKNPAKSVWKESS 608
Query: 541 ICTKTWNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEILDCCPWFEFSDLEVLASEDDQD 600
+CTKTWNNSVL FMKVSDMLEADAGFLVRDT+VFVCEILDCCPWFEFSDLEVLAS+D QD
Sbjct: 609 LCTKTWNNSVLLFMKVSDMLEADAGFLVRDTLVFVCEILDCCPWFEFSDLEVLASDDVQD 668
Query: 601 ALTTDP 606
ALTT+P
Sbjct: 669 ALTTNP 674
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 166/301 (55%), Gaps = 33/301 (10%)
Query: 291 WRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHP-PCHLSAFLEVTD 349
W +E+FTR+K + S+ F +G DCRL+VYPRG S P +S +L++ D
Sbjct: 50 WTVESFTRVK---------AKALWSKYFDVGGYDCRLLVYPRGDSQALPGSISIYLQIID 100
Query: 350 SRNTSSD-WSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDS 408
R TSS W CF S++LS++N + ++ K S +R+S + GW +F +S+ D
Sbjct: 101 PRGTSSSLWDCFASYQLSIINHVDDSLTIRKNSWHRFSNKKRSHGWCDFTLNSSVLDPKM 160
Query: 409 GFLV-QDTVIFSAEVLILKETSIMQDFAEHDXXXXXXXXXXXXXXXXXXFTWKVENFLSF 467
GFL D+++ +A+++IL E+ ++ FTW VENF F
Sbjct: 161 GFLFNNDSLLITADIMILNESVSFSIDNNNE-----SVVGSMTDVLSGTFTWTVENFSMF 215
Query: 468 KDIMETRKIFSKFFQAGGCELRIGVYES------FDTICI-YLESDQAVGSDPDKNFWVR 520
K++++T+KI S F AG C LRIGVY+S + ++C+ +++++V S DK+ W
Sbjct: 216 KEMIKTQKITSPVFVAGECFLRIGVYQSVVNAQEYFSMCLDSTDTEKSVLS--DKSSWCL 273
Query: 521 YRMAVVNQKNPAKTVWKES----SICTKTWNNSVL---QFMKVSDMLEADAGFLVRDTVV 573
+ M+ +NQK+ + KES + K+ +N+ L +MK+SD + DAG+L+ D V
Sbjct: 274 FSMSALNQKHGCTNMNKESYGRFAADNKSGDNTGLGWNDYMKMSDFVNPDAGYLLDDKAV 333
Query: 574 F 574
F
Sbjct: 334 F 334
>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1115
Length = 1115
Score = 90.9 bits (224), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 11/139 (7%)
Query: 288 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLEV 347
KFTW I FTRL RK S F +G R++++P+G + HLS +L+V
Sbjct: 55 KFTWTIPMFTRLN----TRKHY-----SDVFVVGGYKWRILIFPKGNN--VDHLSMYLDV 103
Query: 348 TDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 407
D+ N WS + L+VVNQ S+ KE+Q++++ DWG+ F+ L+ L++
Sbjct: 104 ADAANLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPT 163
Query: 408 SGFLVQDTVIFSAEVLILK 426
G+LV DTV+ AEV + K
Sbjct: 164 RGYLVNDTVLIEAEVAVRK 182
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 11 WDCFASYRLAIVNLVDDSKSIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYLFNTDS 70
W ++ + LA+VN V++ SI +++ H+F++++ G+ F P S +++P GYL N D+
Sbjct: 113 WSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVN-DT 171
Query: 71 VLITADILI 79
VLI A++ +
Sbjct: 172 VLIEAEVAV 180
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 457 FTWKVENFLSFKDIMETRKIFSKFFQAGGCELRIGVY---ESFDTICIYLESDQAVGSDP 513
FTW + F + TRK +S F GG + RI ++ + D + +YL+ A
Sbjct: 56 FTWTIPMFTR----LNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPY 111
Query: 514 DKNFWVRYRMAVVNQKNPAKTVWKESS--ICTKTWNNSVLQFMKVSDMLEADAGFLVRDT 571
+ + ++ +AVVNQ N ++ KE+ + + FM +S++ E G+LV DT
Sbjct: 112 GWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDT 171
Query: 572 VVFVCEI 578
V+ E+
Sbjct: 172 VLIEAEV 178
>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1114
Length = 1114
Score = 90.9 bits (224), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 11/139 (7%)
Query: 288 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLEV 347
KFTW I FTRL RK S F +G R++++P+G + HLS +L+V
Sbjct: 54 KFTWTIPMFTRLN----TRKHY-----SDVFVVGGYKWRILIFPKGNN--VDHLSMYLDV 102
Query: 348 TDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 407
D+ N WS + L+VVNQ S+ KE+Q++++ DWG+ F+ L+ L++
Sbjct: 103 ADAANLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPT 162
Query: 408 SGFLVQDTVIFSAEVLILK 426
G+LV DTV+ AEV + K
Sbjct: 163 RGYLVNDTVLIEAEVAVRK 181
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 11 WDCFASYRLAIVNLVDDSKSIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYLFNTDS 70
W ++ + LA+VN V++ SI +++ H+F++++ G+ F P S +++P GYL N D+
Sbjct: 112 WSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVN-DT 170
Query: 71 VLITADILI 79
VLI A++ +
Sbjct: 171 VLIEAEVAV 179
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 457 FTWKVENFLSFKDIMETRKIFSKFFQAGGCELRIGVY---ESFDTICIYLESDQAVGSDP 513
FTW + F + TRK +S F GG + RI ++ + D + +YL+ A
Sbjct: 55 FTWTIPMFTR----LNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPY 110
Query: 514 DKNFWVRYRMAVVNQKNPAKTVWKESS--ICTKTWNNSVLQFMKVSDMLEADAGFLVRDT 571
+ + ++ +AVVNQ N ++ KE+ + + FM +S++ E G+LV DT
Sbjct: 111 GWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDT 170
Query: 572 VVFVCEI 578
V+ E+
Sbjct: 171 VLIEAEV 177
>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2020682-2027834 REVERSE LENGTH=985
Length = 985
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 11/139 (7%)
Query: 288 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLEV 347
KFTW I NF+R RK S F +G R++++P+G + HLS +L+V
Sbjct: 56 KFTWTIPNFSRQN----TRKHY-----SDVFVVGGYKWRILIFPKGNN--VDHLSMYLDV 104
Query: 348 TDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 407
+D+ + WS + L+VVNQ +V KE+Q++++ DWG+ F+ L+ L+D
Sbjct: 105 SDAASLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPS 164
Query: 408 SGFLVQDTVIFSAEVLILK 426
G+LV DTV+ AEV + K
Sbjct: 165 RGYLVNDTVLVEAEVAVRK 183
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 11 WDCFASYRLAIVNLVDDSKSIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYLFNTDS 70
W +A + LA+VN + ++ +++ H+F++++ G+ F P S ++DP GYL N D+
Sbjct: 114 WSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVN-DT 172
Query: 71 VLITADILI 79
VL+ A++ +
Sbjct: 173 VLVEAEVAV 181
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 120 KFTWKVHNFSLFKDMIRTQKIMSPVFPAGECNLRISVYQSTVNGVDHLSMCLESKDTDKT 179
KFTW + NFS T+K S VF G RI ++ N VDHLSM L+ +D
Sbjct: 56 KFTWTIPNFS----RQNTRKHYSDVFVVGGYKWRILIFPKG-NNVDHLSMYLDV--SDAA 108
Query: 180 AALSDRSCWCLFRMSVLNQKPGSNHTHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFVGS 239
+ S + F ++V+NQ +++ +F A + G+ +M +S+
Sbjct: 109 SLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARE-----SDWGFTSFMPLSELYDP 163
Query: 240 DSGFLVDDTAVFSTSFHVIK--EFSSF-SKNGAVIAGRSGSGA 279
G+LV+DT + V K ++ S+ SK G GA
Sbjct: 164 SRGYLVNDTVLVEAEVAVRKVLDYWSYDSKKETGFVGLKNQGA 206
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 457 FTWKVENFLSFKDIMETRKIFSKFFQAGGCELRIGVY---ESFDTICIYLESDQAVGSDP 513
FTW + NF TRK +S F GG + RI ++ + D + +YL+ A
Sbjct: 57 FTWTIPNFSR----QNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPY 112
Query: 514 DKNFWVRYRMAVVNQKNPAKTVWKESS--ICTKTWNNSVLQFMKVSDMLEADAGFLVRDT 571
+ + ++ +AVVNQ + TV KE+ + + FM +S++ + G+LV DT
Sbjct: 113 GWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDT 172
Query: 572 VVFVCEI 578
V+ E+
Sbjct: 173 VLVEAEV 179
>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1115
Length = 1115
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 11/139 (7%)
Query: 288 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLEV 347
KFTW I NF+R RK S F +G R++++P+G + HLS +L+V
Sbjct: 55 KFTWTIPNFSRQN----TRKHY-----SDVFVVGGYKWRILIFPKGNN--VDHLSMYLDV 103
Query: 348 TDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 407
+D+ + WS + L+VVNQ +V KE+Q++++ DWG+ F+ L+ L+D
Sbjct: 104 SDAASLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPS 163
Query: 408 SGFLVQDTVIFSAEVLILK 426
G+LV DTV+ AEV + K
Sbjct: 164 RGYLVNDTVLVEAEVAVRK 182
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 11 WDCFASYRLAIVNLVDDSKSIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYLFNTDS 70
W +A + LA+VN + ++ +++ H+F++++ G+ F P S ++DP GYL N D+
Sbjct: 113 WSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVN-DT 171
Query: 71 VLITADILI 79
VL+ A++ +
Sbjct: 172 VLVEAEVAV 180
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 120 KFTWKVHNFSLFKDMIRTQKIMSPVFPAGECNLRISVYQSTVNGVDHLSMCLESKDTDKT 179
KFTW + NFS T+K S VF G RI ++ N VDHLSM L+ +D
Sbjct: 55 KFTWTIPNFS----RQNTRKHYSDVFVVGGYKWRILIFPKG-NNVDHLSMYLDV--SDAA 107
Query: 180 AALSDRSCWCLFRMSVLNQKPGSNHTHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFVGS 239
+ S + F ++V+NQ +++ +F A + G+ +M +S+
Sbjct: 108 SLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARE-----SDWGFTSFMPLSELYDP 162
Query: 240 DSGFLVDDTAVFSTSFHVIK--EFSSF-SKNGAVIAGRSGSGA 279
G+LV+DT + V K ++ S+ SK G GA
Sbjct: 163 SRGYLVNDTVLVEAEVAVRKVLDYWSYDSKKETGFVGLKNQGA 205
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 457 FTWKVENFLSFKDIMETRKIFSKFFQAGGCELRIGVY---ESFDTICIYLESDQAVGSDP 513
FTW + NF TRK +S F GG + RI ++ + D + +YL+ A
Sbjct: 56 FTWTIPNFSR----QNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPY 111
Query: 514 DKNFWVRYRMAVVNQKNPAKTVWKESS--ICTKTWNNSVLQFMKVSDMLEADAGFLVRDT 571
+ + ++ +AVVNQ + TV KE+ + + FM +S++ + G+LV DT
Sbjct: 112 GWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDT 171
Query: 572 VVFVCEI 578
V+ E+
Sbjct: 172 VLVEAEV 178
>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1116
Length = 1116
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 11/139 (7%)
Query: 288 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLEV 347
KFTW I NF+R RK S F +G R++++P+G + HLS +L+V
Sbjct: 56 KFTWTIPNFSRQN----TRKHY-----SDVFVVGGYKWRILIFPKGNN--VDHLSMYLDV 104
Query: 348 TDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 407
+D+ + WS + L+VVNQ +V KE+Q++++ DWG+ F+ L+ L+D
Sbjct: 105 SDAASLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPS 164
Query: 408 SGFLVQDTVIFSAEVLILK 426
G+LV DTV+ AEV + K
Sbjct: 165 RGYLVNDTVLVEAEVAVRK 183
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 11 WDCFASYRLAIVNLVDDSKSIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYLFNTDS 70
W +A + LA+VN + ++ +++ H+F++++ G+ F P S ++DP GYL N D+
Sbjct: 114 WSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVN-DT 172
Query: 71 VLITADILI 79
VL+ A++ +
Sbjct: 173 VLVEAEVAV 181
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 120 KFTWKVHNFSLFKDMIRTQKIMSPVFPAGECNLRISVYQSTVNGVDHLSMCLESKDTDKT 179
KFTW + NFS T+K S VF G RI ++ N VDHLSM L+ +D
Sbjct: 56 KFTWTIPNFS----RQNTRKHYSDVFVVGGYKWRILIFPKG-NNVDHLSMYLDV--SDAA 108
Query: 180 AALSDRSCWCLFRMSVLNQKPGSNHTHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFVGS 239
+ S + F ++V+NQ +++ +F A + G+ +M +S+
Sbjct: 109 SLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARE-----SDWGFTSFMPLSELYDP 163
Query: 240 DSGFLVDDTAVFSTSFHVIK--EFSSF-SKNGAVIAGRSGSGA 279
G+LV+DT + V K ++ S+ SK G GA
Sbjct: 164 SRGYLVNDTVLVEAEVAVRKVLDYWSYDSKKETGFVGLKNQGA 206
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 457 FTWKVENFLSFKDIMETRKIFSKFFQAGGCELRIGVY---ESFDTICIYLESDQAVGSDP 513
FTW + NF TRK +S F GG + RI ++ + D + +YL+ A
Sbjct: 57 FTWTIPNFSR----QNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPY 112
Query: 514 DKNFWVRYRMAVVNQKNPAKTVWKESS--ICTKTWNNSVLQFMKVSDMLEADAGFLVRDT 571
+ + ++ +AVVNQ + TV KE+ + + FM +S++ + G+LV DT
Sbjct: 113 GWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDT 172
Query: 572 VVFVCEI 578
V+ E+
Sbjct: 173 VLVEAEV 179
>AT3G58210.1 | Symbols: | TRAF-like family protein |
chr3:21562645-21564067 REVERSE LENGTH=330
Length = 330
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 287 GKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLE 346
KFTW I+NF+ + + + S +F IG RL+VYP G + HLS FLE
Sbjct: 7 NKFTWVIQNFSSSQSRV---------VPSNQFVIGGCKWRLLVYPEGFNKSGDHLSLFLE 57
Query: 347 VTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQ 406
V D R+ WS + L++VNQ + S E+ +++ WG + LT L +
Sbjct: 58 VADPRSLPPGWSRHARYLLTIVNQHSDKISKRNEATKWFNQKIPGWGLSAMIPLTKLHAK 117
Query: 407 DSGFLVQDTVIFSAEVLILK 426
D GFLV D + AEV +L+
Sbjct: 118 DGGFLVNDELKIVAEVNVLE 137
>AT3G58290.1 | Symbols: | TRAF-like superfamily protein |
chr3:21580572-21581861 REVERSE LENGTH=282
Length = 282
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 288 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRG--------QSHPPC 339
KF W I+NF+ L+ L+ C S I + + RL YP G + +
Sbjct: 11 KFVWVIKNFSSLQ--LQD------CYVSDPVLIHDVNWRLFAYPEGSNGDHLLFKKNNGD 62
Query: 340 HLSAFLEVTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVT 399
HLS +LEV D + W + R +VVNQ E SV +E + + K A +WGW E ++
Sbjct: 63 HLSLYLEV-DFESLPCGWRQYTQFRFTVVNQISEHSSVKREGRKWFDKKAPEWGWEEMIS 121
Query: 400 LTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFAEHD 438
LT L D +SGF+V ++ AEV + S Q A D
Sbjct: 122 LTKLNDINSGFVVNGELMIVAEVETFEAVSTSQVAAVRD 160
>AT3G58340.1 | Symbols: | TRAF-like family protein |
chr3:21589071-21590401 REVERSE LENGTH=325
Length = 325
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 288 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLEV 347
KF W I+NF+ L + C S IG+ RL+ +P+G + +LS +LEV
Sbjct: 8 KFCWEIKNFSSLN--------SERC-HSVPVVIGDCKWRLVAFPKG--YKADYLSLYLEV 56
Query: 348 TDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 407
D ++ S W +V R +VNQ ++ SV +E+Q + + A WG+ + LT L +D
Sbjct: 57 ADFKSLPSGWRRYVKFRACIVNQLSQELSVQQETQRWFDQNAPGWGFENMLLLTELNAKD 116
Query: 408 SGFLVQDTVIFSAEVLILK 426
GFLV V+ AEV L+
Sbjct: 117 GGFLVNGQVMIVAEVEFLE 135
>AT5G26260.1 | Symbols: | TRAF-like family protein |
chr5:9200492-9202153 FORWARD LENGTH=351
Length = 351
Score = 73.2 bits (178), Expect = 1e-12, Method: Composition-based stats.
Identities = 65/298 (21%), Positives = 129/298 (43%), Gaps = 34/298 (11%)
Query: 293 IENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPC--HLSAFLEVTDS 350
I +F+ +KD G +S F+ RL++Y +G H+S + + ++
Sbjct: 67 ITSFSVIKD-------RGEPYESSIFEAAGYKWRLVLYVKGNPKGGINNHISLYARIEET 119
Query: 351 RNTSSDWSCFVSHRLSVVNQRMEDK-SVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSG 409
W V +L V N++++ SVT + RY+ A K+WG+ + ++L + ++ + G
Sbjct: 120 ETLPRGWEVNVDLKLFVHNRKLKKYLSVTDGTVKRYNDAKKEWGFTQLISLPTFYNANEG 179
Query: 410 FLVQDTVIFSAEVLILKETSIMQDFAEHDXXXXXXXXXXXXXXXXXXFTWKVENFLSFKD 469
+LVQDT F AE+ I+ T + FTWK+ F + +D
Sbjct: 180 YLVQDTASFGAEIFIVNPTEKQEKVT------------FISNPPDNVFTWKILRFSTLED 227
Query: 470 IMETRKIFSKFFQAGGCELRIGVYESFD------TICIYLESDQAVGSDPDKNFWVRYRM 523
+ +S F G R+G + I+L + + N W +
Sbjct: 228 ----KFYYSDDFLVGDRYWRLGFNPKGSGGGRPHALPIFLYAQGHKANAVVTNTWGAVNL 283
Query: 524 AVVNQKNPA-KTVWKESSICTKT-WNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEIL 579
+ NQ++ K ++ + ++ + V + +S++ +A G++V D ++F E++
Sbjct: 284 RLKNQRSSNHKQLYSAAWYPIRSDYGVGVNNIILMSELKDASKGYMVNDAIIFEAEMV 341
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 33/213 (15%)
Query: 226 GWNDYMKMSDFVGSDSGFLVDDTAVFSTSFHVIKEFSSFSKNGAVIAGRSGSGARKSDGH 285
G+ + + F ++ G+LV DTA F ++ K + S+
Sbjct: 163 GFTQLISLPTFYNANEGYLVQDTASFGAEIFIVNPTEKQEKVTFI-----------SNPP 211
Query: 286 IGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHP-PCHLSAF 344
FTW+I F+ L+D S F +G+R RL P+G P L F
Sbjct: 212 DNVFTWKILRFSTLEDKF---------YYSDDFLVGDRYWRLGFNPKGSGGGRPHALPIF 262
Query: 345 LEVTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKA----AKDWGW--REFV 398
L + + V++ VN R++++ + Q YS A D+G +
Sbjct: 263 LYAQGHKANA-----VVTNTWGAVNLRLKNQRSSNHKQ-LYSAAWYPIRSDYGVGVNNII 316
Query: 399 TLTSLFDQDSGFLVQDTVIFSAEVLILKETSIM 431
++ L D G++V D +IF AE++ + T+I+
Sbjct: 317 LMSELKDASKGYMVNDAIIFEAEMVKVSVTNIV 349
>AT3G17380.1 | Symbols: | TRAF-like family protein |
chr3:5950240-5952124 FORWARD LENGTH=309
Length = 309
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 137/312 (43%), Gaps = 31/312 (9%)
Query: 124 KVHNFSLFKDMIRTQKIMSPVFPAGECNLRISVY---QSTVNGVDHLSMCLESKDTDKTA 180
K+ +FSL ++ + F AG ++ +Y + N DH+S+ L D+ ++
Sbjct: 25 KIESFSLLTKH-AIERYETESFEAGGYKWKLVLYPNGNKSKNTKDHVSVYLSLADS--SS 81
Query: 181 ALSDRSCWCLFRMSVLNQKPGSNHTHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFVGSD 240
+ +FR+ +L+Q + + + RF + + G++ ++ F +
Sbjct: 82 LSPGWEVYAVFRLYLLDQNKDNYLILQGNERRFHSVKRE-----WGFDKFIPTGTFSDAS 136
Query: 241 SGFLVDDTAVFSTSFHVIKEFSSFSKNGAVIAGRSGSGARKSDGHIGKFTWRIENFTRLK 300
+G+L++DT +F V KE S GR + D K W+IENF++L
Sbjct: 137 NGYLMEDTCMFGADVFVSKERRS---------GRGECLSMIKDATSSKHVWKIENFSKLD 187
Query: 301 DLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRG-QSHPPCHLSAFLEVTDSRNTSSDWSC 359
S F G+R ++ YP G + HLS +L + D S
Sbjct: 188 KE---------SYDSNAFFAGDRKWKIEFYPTGTKQGTGTHLSIYLTLVDPETISDGTKI 238
Query: 360 FVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFS 419
FV + + +Q ++ + + + +S+++ + GW ++V++ +SG L++D +
Sbjct: 239 FVEFTIRIFDQ-LQGRHIAGKVTKWFSRSSSEHGWVKYVSMVYFTQPNSGLLLKDVCLVE 297
Query: 420 AEVLILKETSIM 431
A+V + TS +
Sbjct: 298 ADVCVHGITSAI 309
>AT3G58250.1 | Symbols: | TRAF-like family protein |
chr3:21570745-21572143 REVERSE LENGTH=317
Length = 317
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 9/144 (6%)
Query: 288 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLEV 347
KF+W I+NF+ L+ I S +F I RL+ +P+G HLS +L+V
Sbjct: 10 KFSWVIKNFSSLQ---------SEKIYSDQFVIDGCRWRLLAFPKGNDTKSDHLSLYLDV 60
Query: 348 TDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 407
+S + W ++VN E S KE+ + + + DWG+ V L L +D
Sbjct: 61 AESESLPCGWRRHAQFSFTIVNHIPEKCSQRKETIHWFCEKVSDWGFTNLVPLIELKAED 120
Query: 408 SGFLVQDTVIFSAEVLILKETSIM 431
SGFLV+ + E+ +L+ ++
Sbjct: 121 SGFLVKGELKIVVEIEVLEVIGLL 144
>AT3G58200.1 | Symbols: | TRAF-like family protein |
chr3:21560086-21561358 REVERSE LENGTH=319
Length = 319
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 63/125 (50%), Gaps = 10/125 (8%)
Query: 287 GKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLE 346
KF W I+NF+ L +R + + F +G+ RL+ YP+G C S FL
Sbjct: 7 NKFRWVIKNFSSLGS---ERVFSDI------FVVGSCKWRLMAYPKGVRDNRC-FSLFLV 56
Query: 347 VTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQ 406
VTD + DW RL+VVNQ E+ S+ KE+Q + + WG+ + LT L +
Sbjct: 57 VTDFKTLPCDWKRHTRLRLNVVNQLSEELSILKETQMWFDQKTPAWGFLAMLPLTELKAE 116
Query: 407 DSGFL 411
+ GFL
Sbjct: 117 NGGFL 121
>AT3G58410.1 | Symbols: | TRAF-like family protein |
chr3:21604871-21606229 REVERSE LENGTH=328
Length = 328
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 65/138 (47%), Gaps = 34/138 (24%)
Query: 288 KFTWRIENFTRLKDLLKKRKITGLCIK--SRRFQIGNRDCRLIVYPRGQSHPPC-HLSAF 344
KF W I+NF+ L+ C K S FQIG+ RL +YP+G + C +LS F
Sbjct: 29 KFAWVIKNFSSLQ-----------CKKFYSVPFQIGDCKWRLSIYPKGNN---CDYLSLF 74
Query: 345 LEVTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLF 404
LEV D ++ S W +V RL +V Q M WG+ + LT L
Sbjct: 75 LEVADFKSLPSGWRRYVKLRLYIVKQEM-----------------WGWGFLYMLPLTKLH 117
Query: 405 DQDSGFLVQDTVIFSAEV 422
D+ GFLV ++ AEV
Sbjct: 118 DEKEGFLVNGELMIVAEV 135
>AT3G58360.1 | Symbols: | TRAF-like family protein |
chr3:21593505-21594866 REVERSE LENGTH=298
Length = 298
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 288 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLEV 347
K TW IENF+ L KK I S F +G R +VYP+G + +L +LEV
Sbjct: 8 KITWAIENFSSLHS--KK-------IYSDPFIVGGCKWRFLVYPKGNNVD--YLFLYLEV 56
Query: 348 TDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 407
D + S +W + L+VVNQ +S E Q + + WG L + +D
Sbjct: 57 ADYESLSPEWRRHARYLLNVVNQNSVKRSKQNEEQKWFDVQSPRWGRLSMFPLNEINAKD 116
Query: 408 SGFLVQDTVIFSAEVLILK 426
SGFLV + AE+ +L+
Sbjct: 117 SGFLVNGELKIVAEIEVLE 135
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 458 TWKVENFLSFKDIMETRKIFSKFFQAGGCELRIGVY---ESFDTICIYLESDQAVGSDPD 514
TW +ENF S + ++KI+S F GGC+ R VY + D + +YLE P+
Sbjct: 10 TWAIENFSS----LHSKKIYSDPFIVGGCKWRFLVYPKGNNVDYLFLYLEVADYESLSPE 65
Query: 515 KNFWVRYRMAVVNQKNPAKTVWKESS----ICTKTWNNSVLQFMKVSDMLEADAGFLVRD 570
RY + VVNQ + ++ E + + W L ++++ D+GFLV
Sbjct: 66 WRRHARYLLNVVNQNSVKRSKQNEEQKWFDVQSPRWGR--LSMFPLNEINAKDSGFLVNG 123
Query: 571 TVVFVCEI 578
+ V EI
Sbjct: 124 ELKIVAEI 131
>AT3G58260.1 | Symbols: | TRAF-like family protein |
chr3:21573754-21575114 REVERSE LENGTH=321
Length = 321
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 11/140 (7%)
Query: 289 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPR-GQSHPPCHLSAFLEV 347
FTW I+N + L+ GL ++S+ F +G RLI YP + LS +L V
Sbjct: 9 FTWVIKNLSTLQ---------GLEVRSKIFVVGGCKWRLIAYPEVNDADGYLSLSVYLGV 59
Query: 348 TDS-RNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQ 406
D + S W L++VNQ E S +E+Q + + A WG+ + L + D+
Sbjct: 60 PDCCESLPSGWKRHAKFSLTIVNQLSEGLSQVQETQAWFDENAPGWGFPPMLNLKDVSDK 119
Query: 407 DSGFLVQDTVIFSAEVLILK 426
GFLV D V+ + V +++
Sbjct: 120 YGGFLVNDEVMVAVAVDVIE 139
>AT3G58270.2 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:21576033-21577655 REVERSE LENGTH=343
Length = 343
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 287 GKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLE 346
KFTW I+NF+ + RK S F + RL+ +P+G LS +L
Sbjct: 7 NKFTWVIKNFSSQQ----SRKNY-----SDEFFVDGCKWRLLAFPKGNGVEK--LSLYLA 55
Query: 347 VTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQ 406
V S W SVVNQ ++ S +E++N + + DWG+ ++L L D+
Sbjct: 56 VAGSEFLPDGWRRHAYFHFSVVNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDK 115
Query: 407 DSGFLVQDTVIFSAEVLILK 426
D GFLV + +V +L+
Sbjct: 116 DGGFLVNGELKIVVDVSVLE 135
>AT3G58270.1 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:21576033-21577655 REVERSE LENGTH=343
Length = 343
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 287 GKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLE 346
KFTW I+NF+ + RK S F + RL+ +P+G LS +L
Sbjct: 7 NKFTWVIKNFSSQQ----SRKNY-----SDEFFVDGCKWRLLAFPKGNGVEK--LSLYLA 55
Query: 347 VTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQ 406
V S W SVVNQ ++ S +E++N + + DWG+ ++L L D+
Sbjct: 56 VAGSEFLPDGWRRHAYFHFSVVNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDK 115
Query: 407 DSGFLVQDTVIFSAEVLILK 426
D GFLV + +V +L+
Sbjct: 116 DGGFLVNGELKIVVDVSVLE 135
>AT5G43560.2 | Symbols: | TRAF-like superfamily protein |
chr5:17501043-17505526 FORWARD LENGTH=1055
Length = 1055
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 286 IGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPC----HL 341
GK TW IE F+ + KR++ G F++G +++YP+G C HL
Sbjct: 68 FGKNTWTIEKFSDIN----KRELRGDV-----FEVGGYKWYILIYPQG-----CDVCNHL 113
Query: 342 SAFLEVTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLT 401
S FL V WS F ++V N+ + KS ++ +R+ K DWGW++F+ L
Sbjct: 114 SLFLCVAHHEKLLPGWSHFAQFTIAVSNKDPK-KSKHSDTLHRFWKKEHDWGWKKFIELP 172
Query: 402 SL---FDQDSGFLVQDTVIFSAEVLILKE 427
L F DSG L A+V +++E
Sbjct: 173 KLKEGFIDDSGCLT-----IKAQVQVIRE 196
>AT5G43560.1 | Symbols: | TRAF-like superfamily protein |
chr5:17501043-17505526 FORWARD LENGTH=1055
Length = 1055
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 286 IGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPC----HL 341
GK TW IE F+ + KR++ G F++G +++YP+G C HL
Sbjct: 68 FGKNTWTIEKFSDIN----KRELRGDV-----FEVGGYKWYILIYPQG-----CDVCNHL 113
Query: 342 SAFLEVTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLT 401
S FL V WS F ++V N+ + KS ++ +R+ K DWGW++F+ L
Sbjct: 114 SLFLCVAHHEKLLPGWSHFAQFTIAVSNKDPK-KSKHSDTLHRFWKKEHDWGWKKFIELP 172
Query: 402 SL---FDQDSGFLVQDTVIFSAEVLILKE 427
L F DSG L A+V +++E
Sbjct: 173 KLKEGFIDDSGCLT-----IKAQVQVIRE 196
>AT1G31390.1 | Symbols: | TRAF-like family protein |
chr1:11243191-11244392 REVERSE LENGTH=268
Length = 268
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 283 DGHIGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRG--QSHPPCH 340
D + K TW I+NF+ + I S F +G+ L+ YP+G +S C
Sbjct: 3 DQYEKKITWTIKNFSF---------VQSQAIDSDIFVVGDSKWHLVAYPKGNGESTNKC- 52
Query: 341 LSAFLEVTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTL 400
LS +L V D ++ + W + +RL+VVNQ E S + Q + K G++ + L
Sbjct: 53 LSLYLNVADFQSLPNGWKRHIKYRLTVVNQMSEKLSEQEVIQGWFYKNFHISGFQTMLPL 112
Query: 401 TSLFDQDSGFLVQDTV 416
+ L D++ GFLV V
Sbjct: 113 SKLLDKNGGFLVNGDV 128
>AT5G26280.1 | Symbols: | TRAF-like family protein |
chr5:9208724-9210403 FORWARD LENGTH=350
Length = 350
Score = 62.0 bits (149), Expect = 4e-09, Method: Composition-based stats.
Identities = 61/286 (21%), Positives = 115/286 (40%), Gaps = 45/286 (15%)
Query: 314 KSRRFQIGNRDCRLIVYPRGQSHPPC--HLSAFLEVTDSRNTSSDWSCFVSHRLSVVNQR 371
+S F+ RL++Y G + H+S + + ++ + W V +L V N +
Sbjct: 80 ESSVFEAAGYKWRLVLYVNGNKNDGGNDHISLYARIEETNSLPLGWEVNVDLKLFVHNGK 139
Query: 372 MEDK-SVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSI 430
+ +VT RY+ A K+WG+ + + ++ ++ + G+L QDT F AE+ I+K
Sbjct: 140 LHKYLTVTDGLVKRYNNAKKEWGFGQLIPRSTFYNANEGYLDQDTGSFGAEIFIVKPAQQ 199
Query: 431 MQDFAEHDXXXXXXXXXXXXXXXXXXFTWKVENFLSFKDIMETRKIFSKFFQAGGCELRI 490
+ FTWK+ F + +D + +S F R+
Sbjct: 200 QEKVT------------FISNPPNNVFTWKILRFSTLED----KFYYSDDFLVEDRYWRL 243
Query: 491 GVYESFD------TICIYLESDQAVGSDPDKNFWVRYRMAVVNQKNPAKTVWKESSICTK 544
G D + I+L + + N W + + NQ++ I +
Sbjct: 244 GFNPKGDGGGRPHALPIFLFAQGHKANAVATNTWGAVNLRLKNQRST-----NHRQIYSA 298
Query: 545 TW-----------NNSVLQFMKVSDMLEADAGFLVRDTVVFVCEIL 579
W NN +L ++D+ +A G+LV D ++F E++
Sbjct: 299 AWYPIGSGYGVGVNNIIL----LADLNDASKGYLVNDAIIFEAEMV 340
>AT1G04300.1 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1074
Length = 1074
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 23/146 (15%)
Query: 287 GKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPC----HLS 342
G++TW+I F+ +IT +S F+ G +++YP+G C HLS
Sbjct: 68 GQYTWKIPKFS---------EITKREHRSNVFEAGGYKWYILIYPQG-----CDVCNHLS 113
Query: 343 AFLEVTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTS 402
FL V + WS F +SV++Q ++ KS ++ +R+ K DWGW++F+ L
Sbjct: 114 LFLCVANYDKLLPGWSQFAQFTISVLSQDLK-KSKFSDTLHRFWKKEHDWGWKKFMELPK 172
Query: 403 LFDQDSGFLVQDTVI-FSAEVLILKE 427
L D GF+ + + A+V +++E
Sbjct: 173 LKD---GFIDESGCLTIEAKVQVIRE 195
>AT2G04190.1 | Symbols: | TRAF-like family protein |
chr2:1427594-1430230 REVERSE LENGTH=411
Length = 411
Score = 60.8 bits (146), Expect = 6e-09, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 35/269 (13%)
Query: 326 RLIVYPRGQSHP--PCHLSAFLEVTDSRNTSSDWSCFVSHRLSVVNQRMEDK--SVTKES 381
RLI+Y G + H+S +L ++ + + D S +L V N + +DK +VT
Sbjct: 153 RLILYVNGNQNDGGSNHISLYLRSEETDHLTYDGSINFVLKLFVYNGK-QDKYLTVTDGI 211
Query: 382 QNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFAEHDXXX 441
Q RY+ K+WG+ + + L++ D G+L QDT F AE+ + + +
Sbjct: 212 QKRYNYKNKEWGYGKLIPLSTFLDTSQGYLEQDTASFGAEIFLCPPIQVQEKVT------ 265
Query: 442 XXXXXXXXXXXXXXXFTWKVENFLSFKDIMETRKIFSKFFQAGGCELRIGVYES------ 495
FTWK+ +F + +DI+ +S F R+GV
Sbjct: 266 ------FISNPPNNVFTWKILHFSTLEDIV----YYSDDFLVEDRYWRLGVNPKGTGDGR 315
Query: 496 FDTICIYLESDQAVGSDPD---KNFWVRYRMAVVNQKNPAKTVWKESSI--CTKTWNNSV 550
I I+L A G P+ + W + V NQ++ + +++ + V
Sbjct: 316 SQAIKIFL---YAQGHKPNAVVSSTWGAVNLRVKNQRSSNHSQIYSAALYPIRNDYGVGV 372
Query: 551 LQFMKVSDMLEADAGFLVRDTVVFVCEIL 579
+ ++++ +A +LV D+++F E++
Sbjct: 373 NTVLSLAELNDAVKEYLVNDSIIFEAEMV 401
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 79/314 (25%), Positives = 130/314 (41%), Gaps = 46/314 (14%)
Query: 131 FKDMI-RTQKIMSPVFPAG-ECNLRISVY---QSTVNGVDHLSMCLESKDTDKTAALSDR 185
F ++I R + S VF A E R+ +Y G +H+S+ L S++TD D
Sbjct: 129 FSEIIGREEPYESSVFEAYFEHKWRLILYVNGNQNDGGSNHISLYLRSEETDHLT--YDG 186
Query: 186 SCWCLFRMSVLNQKPGSNHTHRDSY-GRFAADNKSGDNTSLGWNDYMKMSDFVGSDSGFL 244
S + ++ V N K T D R+ NK G+ + +S F+ + G+L
Sbjct: 187 SINFVLKLFVYNGKQDKYLTVTDGIQKRYNYKNKE-----WGYGKLIPLSTFLDTSQGYL 241
Query: 245 VDDTAVFSTSFHVIKEFSSFSKNGAVIAGRSGSGARKSDGHIGKFTWRIENFTRLKDLLK 304
DTA F + K + S+ FTW+I +F+ L+D++
Sbjct: 242 EQDTASFGAEIFLCPPIQVQEKVTFI-----------SNPPNNVFTWKILHFSTLEDIV- 289
Query: 305 KRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCH-LSAFLEVTDSRNTSSDWSCFVSH 363
S F + +R RL V P+G + FL + + VS
Sbjct: 290 --------YYSDDFLVEDRYWRLGVNPKGTGDGRSQAIKIFLYAQGHKPNA-----VVSS 336
Query: 364 RLSVVNQRMEDKSVTKESQNRYSKA----AKDWGW--REFVTLTSLFDQDSGFLVQDTVI 417
VN R++++ + SQ YS A D+G ++L L D +LV D++I
Sbjct: 337 TWGAVNLRVKNQRSSNHSQ-IYSAALYPIRNDYGVGVNTVLSLAELNDAVKEYLVNDSII 395
Query: 418 FSAEVLILKETSIM 431
F AE++ + T+I+
Sbjct: 396 FEAEMVKVSVTNIV 409
>AT2G04170.4 | Symbols: | TRAF-like family protein |
chr2:1417404-1418711 REVERSE LENGTH=298
Length = 298
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 58/277 (20%), Positives = 115/277 (41%), Gaps = 27/277 (9%)
Query: 314 KSRRFQIGNRDCRLIVY--PRGQSHPPCHLSAFLEVTDSRNTSSDWSCFVSHRLSVVNQR 371
+S F+ G RL++Y H+S ++ + ++ + W V +L V N +
Sbjct: 28 ESSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNGK 87
Query: 372 MEDKSVTKES-QNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSI 430
+ K+ RY+ A K+WG+ + + LT+ D + G+L QD F AE+ +
Sbjct: 88 QRKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIFSGTAVQV 147
Query: 431 MQDFAEHDXXXXXXXXXXXXXXXXXXFTWKVENFLSFKDIMETRKIF---SKFFQAGGCE 487
+ FTWK+ +F + +D F ++++ G
Sbjct: 148 QEKVT------------FISNPPNNVFTWKILHFSNLEDKFYYSDDFLVEDRYWRLGFNP 195
Query: 488 LRIGVYESFDTICIYLESDQAVGSDPD---KNFWVRYRMAVVNQKNPAKT-VWKESSICT 543
G S I I+L A G P+ N W + + NQ++ ++ + T
Sbjct: 196 KGTGDGRS-QAIPIFL---YAQGHKPNAVATNTWGAVNLRLKNQRSSNHAQIYSAAWYPT 251
Query: 544 KT-WNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEIL 579
++ + V + +++ +A G+ V D+++F E++
Sbjct: 252 RSDYGVGVNTIISLAEFNDASKGYSVNDSIIFEAEMV 288
>AT2G04170.3 | Symbols: | TRAF-like family protein |
chr2:1417404-1418711 REVERSE LENGTH=298
Length = 298
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 58/277 (20%), Positives = 115/277 (41%), Gaps = 27/277 (9%)
Query: 314 KSRRFQIGNRDCRLIVY--PRGQSHPPCHLSAFLEVTDSRNTSSDWSCFVSHRLSVVNQR 371
+S F+ G RL++Y H+S ++ + ++ + W V +L V N +
Sbjct: 28 ESSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNGK 87
Query: 372 MEDKSVTKES-QNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSI 430
+ K+ RY+ A K+WG+ + + LT+ D + G+L QD F AE+ +
Sbjct: 88 QRKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIFSGTAVQV 147
Query: 431 MQDFAEHDXXXXXXXXXXXXXXXXXXFTWKVENFLSFKDIMETRKIF---SKFFQAGGCE 487
+ FTWK+ +F + +D F ++++ G
Sbjct: 148 QEKVT------------FISNPPNNVFTWKILHFSNLEDKFYYSDDFLVEDRYWRLGFNP 195
Query: 488 LRIGVYESFDTICIYLESDQAVGSDPD---KNFWVRYRMAVVNQKNPAKT-VWKESSICT 543
G S I I+L A G P+ N W + + NQ++ ++ + T
Sbjct: 196 KGTGDGRS-QAIPIFL---YAQGHKPNAVATNTWGAVNLRLKNQRSSNHAQIYSAAWYPT 251
Query: 544 KT-WNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEIL 579
++ + V + +++ +A G+ V D+++F E++
Sbjct: 252 RSDYGVGVNTIISLAEFNDASKGYSVNDSIIFEAEMV 288
>AT2G04170.2 | Symbols: | TRAF-like family protein |
chr2:1417404-1419156 REVERSE LENGTH=420
Length = 420
Score = 58.9 bits (141), Expect = 3e-08, Method: Composition-based stats.
Identities = 58/277 (20%), Positives = 115/277 (41%), Gaps = 27/277 (9%)
Query: 314 KSRRFQIGNRDCRLIVY--PRGQSHPPCHLSAFLEVTDSRNTSSDWSCFVSHRLSVVNQR 371
+S F+ G RL++Y H+S ++ + ++ + W V +L V N +
Sbjct: 150 ESSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNGK 209
Query: 372 MEDKSVTKES-QNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSI 430
+ K+ RY+ A K+WG+ + + LT+ D + G+L QD F AE+ +
Sbjct: 210 QRKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIFSGTAVQV 269
Query: 431 MQDFAEHDXXXXXXXXXXXXXXXXXXFTWKVENFLSFKDIMETRKIF---SKFFQAGGCE 487
+ FTWK+ +F + +D F ++++ G
Sbjct: 270 QEKVT------------FISNPPNNVFTWKILHFSNLEDKFYYSDDFLVEDRYWRLGFNP 317
Query: 488 LRIGVYESFDTICIYLESDQAVGSDPD---KNFWVRYRMAVVNQKNPAKT-VWKESSICT 543
G S I I+L A G P+ N W + + NQ++ ++ + T
Sbjct: 318 KGTGDGRS-QAIPIFL---YAQGHKPNAVATNTWGAVNLRLKNQRSSNHAQIYSAAWYPT 373
Query: 544 KT-WNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEIL 579
++ + V + +++ +A G+ V D+++F E++
Sbjct: 374 RSDYGVGVNTIISLAEFNDASKGYSVNDSIIFEAEMV 410
>AT2G04170.1 | Symbols: | TRAF-like family protein |
chr2:1417404-1419156 REVERSE LENGTH=420
Length = 420
Score = 58.9 bits (141), Expect = 3e-08, Method: Composition-based stats.
Identities = 58/277 (20%), Positives = 115/277 (41%), Gaps = 27/277 (9%)
Query: 314 KSRRFQIGNRDCRLIVY--PRGQSHPPCHLSAFLEVTDSRNTSSDWSCFVSHRLSVVNQR 371
+S F+ G RL++Y H+S ++ + ++ + W V +L V N +
Sbjct: 150 ESSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNGK 209
Query: 372 MEDKSVTKES-QNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSI 430
+ K+ RY+ A K+WG+ + + LT+ D + G+L QD F AE+ +
Sbjct: 210 QRKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIFSGTAVQV 269
Query: 431 MQDFAEHDXXXXXXXXXXXXXXXXXXFTWKVENFLSFKDIMETRKIF---SKFFQAGGCE 487
+ FTWK+ +F + +D F ++++ G
Sbjct: 270 QEKVT------------FISNPPNNVFTWKILHFSNLEDKFYYSDDFLVEDRYWRLGFNP 317
Query: 488 LRIGVYESFDTICIYLESDQAVGSDPD---KNFWVRYRMAVVNQKNPAKT-VWKESSICT 543
G S I I+L A G P+ N W + + NQ++ ++ + T
Sbjct: 318 KGTGDGRS-QAIPIFL---YAQGHKPNAVATNTWGAVNLRLKNQRSSNHAQIYSAAWYPT 373
Query: 544 KT-WNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEIL 579
++ + V + +++ +A G+ V D+++F E++
Sbjct: 374 RSDYGVGVNTIISLAEFNDASKGYSVNDSIIFEAEMV 410
>AT2G05420.1 | Symbols: | TRAF-like family protein |
chr2:1983901-1985341 FORWARD LENGTH=297
Length = 297
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 16/144 (11%)
Query: 289 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQ------SHPPCHLS 342
TW IENF+ L+ I S +F +G+ RL YP+G ++ +L+
Sbjct: 10 ITWVIENFSSLQ---------SASIHSDQFVVGDCKWRLKAYPKGNEKATYLAYRANNLA 60
Query: 343 AFLEVTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTS 402
+L V +S++ W+ L++VNQ+ E S ESQ+ + + G+ + LT+
Sbjct: 61 LYLNVANSKSFPIGWTRHTKFSLTLVNQKSEKLSKLTESQHWFDHKSTSRGFPAMIPLTN 120
Query: 403 LFDQDSGFLVQDTVIFSAEVLILK 426
L + GFLV + A+V +L+
Sbjct: 121 L-HTNEGFLVNGELTLVAKVEVLE 143
>AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology
domain-containing protein | chr3:16343333-16346027
FORWARD LENGTH=564
Length = 564
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 288 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLEV 347
KFTW I+NF+ L+ IKS F IG L+ YP G+ + +LS +L+
Sbjct: 5 KFTWVIKNFSSLQSEY---------IKSDIFVIGGCKWCLLAYPNGKQNAS-YLSLYLDG 54
Query: 348 TDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 407
+ + RL+VVNQ E+ S E + + K G+ E + LT L +
Sbjct: 55 PTLKTLPCGCRRRIRFRLTVVNQLSENLSRRGEGKRWFDKKLPLCGYEEVLLLTKLNAKH 114
Query: 408 SGFLVQDTVIFSAEVLILK 426
GFLV + V AEV +L+
Sbjct: 115 GGFLVNNEVKIVAEVDVLE 133
>AT3G58220.2 | Symbols: | TRAF-like family protein |
chr3:21564677-21566435 REVERSE LENGTH=453
Length = 453
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 25/165 (15%)
Query: 273 GRSGSGARKSDGHIGKFTWRIENFTRLKDLLKKRKITGL-CIKSRRFQIGNRDCRLIVYP 331
GR GS K++ F+W I++F+ L G+ I S F IG RLI YP
Sbjct: 2 GRIGSPLGKNE-----FSWVIKDFSSL----------GVRAIYSDEFVIGGCKWRLIAYP 46
Query: 332 RGQSHPPCHLSAFLEVTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNR-YSKAAK 390
G + ++S ++EV DS++ S WS R+ VVN + S K +N + +
Sbjct: 47 MG-NRIKKYMSLYVEVADSKHLPSGWSINTELRMEVVNHNLYKPSQQKYRKNLWFDQKTP 105
Query: 391 DWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFA 435
WG++ + + L ++ GFLV S EV I+ + + + F
Sbjct: 106 SWGYKTMIRHSKLSGEE-GFLV------SGEVTIVVKIDVYRVFG 143
>AT3G44790.1 | Symbols: | TRAF-like family protein |
chr3:16328792-16330265 FORWARD LENGTH=324
Length = 324
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 288 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLEV 347
KFTW I+NF+ L+ I S +F IG C+ + +G + +LS FL V
Sbjct: 5 KFTWVIKNFSSLQSKY---------INSDKFVIGG--CKW--FLKGYQNAN-YLSLFLMV 50
Query: 348 TDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 407
S+ W + RL+VVNQ ++ S +E++ + + G R ++LT L +
Sbjct: 51 ATSKTLPCGWRRYTRFRLTVVNQLSDELSQQRETETWFDQNVVLSGNRHMISLTKLNAKK 110
Query: 408 SGFLVQDTVIFSAEVLILK 426
GFLV + V EV +L+
Sbjct: 111 GGFLVNNEVKIVVEVDVLQ 129
>AT5G52330.1 | Symbols: | TRAF-like superfamily protein |
chr5:21247596-21249732 REVERSE LENGTH=397
Length = 397
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 287 GKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLE 346
GK TW+I+ F+++ KR+ S F+IG +++YP G HLS FL
Sbjct: 19 GKNTWKIKKFSQIS----KREFA-----SSVFEIGGYSWHILMYPEG-CDVSNHLSLFLC 68
Query: 347 VTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSL--- 403
V + WS +SV+++ + KS ++ +R+ K DWGW++F+ L L
Sbjct: 69 VANHDELLPGWSQLAQFTISVMHKDPK-KSKFSDTLHRFWKKEHDWGWKKFMELPKLRDG 127
Query: 404 FDQDSGFLVQDTVI 417
F DSG L +T +
Sbjct: 128 FIDDSGCLTIETKV 141
>AT1G04300.3 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1082
Length = 1082
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 31/154 (20%)
Query: 287 GKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPC----HLS 342
G++TW+I F+ +IT +S F+ G +++YP+G C HLS
Sbjct: 68 GQYTWKIPKFS---------EITKREHRSNVFEAGGYKWYILIYPQG-----CDVCNHLS 113
Query: 343 AFLEVTDSRNT--------SSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGW 394
FL V + + WS F +SV++Q ++ KS ++ +R+ K DWGW
Sbjct: 114 LFLCVANYDKLLPGSFAILEAGWSQFAQFTISVLSQDLK-KSKFSDTLHRFWKKEHDWGW 172
Query: 395 REFVTLTSLFDQDSGFLVQDTVI-FSAEVLILKE 427
++F+ L L D GF+ + + A+V +++E
Sbjct: 173 KKFMELPKLKD---GFIDESGCLTIEAKVQVIRE 203
>AT1G31400.1 | Symbols: | TRAF-like family protein |
chr1:11245225-11246481 REVERSE LENGTH=278
Length = 278
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 282 SDGHIGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRG--QSHPPC 339
+D + + TW I+NF+ L+ I F +G+ L+ YP+G S C
Sbjct: 2 ADQYEKRITWTIKNFSSLQSH---------AIYFDIFVVGDTKWHLLAYPKGYGDSINKC 52
Query: 340 HLSAFLEVTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVT 399
LS FL V D + S W + +RL+VVNQ E S + ++ + + +G + +
Sbjct: 53 -LSLFLGVPDPDDLPSGWKRHIIYRLTVVNQMSEKLSKQEVARGGFYPRSLTFGSQVMLP 111
Query: 400 LTSLFDQDSGFLVQDTVIFSAEVLILK 426
LT L+ GFLV V AEV +L+
Sbjct: 112 LTELY---GGFLVSGQVKIVAEVGVLE 135
>AT5G26320.1 | Symbols: | TRAF-like family protein |
chr5:9238310-9241236 FORWARD LENGTH=352
Length = 352
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/287 (18%), Positives = 111/287 (38%), Gaps = 35/287 (12%)
Query: 312 CIKSRRFQIGNRDCRLIVYPRGQSHPPC----HLSAFLEVTDSRNTSSDWSCFVSHRLSV 367
+S F+ R +++ G + P +++ ++ + ++ + W V +L V
Sbjct: 78 AFESSTFEAAGYKWRFMLFVNGNQNDPDGGHENMALYVGIKETESFPRGWEVNVDLKLFV 137
Query: 368 VNQRMEDK-SVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILK 426
N+++ +V+ + RY A WG+ + T+L D + G+++ DT+ F AE+ I+
Sbjct: 138 HNEKLHKYLTVSDGTVKRYEAAKTYWGFGNLIPRTTLLDPNEGYILHDTLSFGAEISIVN 197
Query: 427 ETSIMQDFAEHDXXXXXXXXXXXXXXXXXXFTWKVENFLSFKDIMETRKIFSKFFQAGGC 486
+ FTWK+ F +E + +S F G
Sbjct: 198 PAEKQEKIT------------FISNPPDNVFTWKILRF----STLENKFYYSDEFLVGDR 241
Query: 487 ELRIGVY------ESFDTICIYLESDQAVGSDPDKNFWVRYRMAVVNQKNPAKTVWKESS 540
R+G E + I+L + + N W + + NQ++ +
Sbjct: 242 YWRLGFNPKGYQGERPRALSIFLYAQGYKANAVITNTWGSVNLQLKNQRSSNHIQLYSEA 301
Query: 541 ICT-----KTWNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEILDCC 582
C NS++ + D+ + G+LV D ++F E++
Sbjct: 302 WCAIRSGYGIEGNSIIL---LEDLQNSSKGYLVNDAIIFEAELVKVS 345
>AT2G04170.5 | Symbols: | TRAF-like family protein |
chr2:1417660-1419156 REVERSE LENGTH=369
Length = 369
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 314 KSRRFQIGNRDCRLIVY--PRGQSHPPCHLSAFLEVTDSRNTSSDWSCFVSHRLSVVNQR 371
+S F+ G RL++Y H+S ++ + ++ + W V +L V N +
Sbjct: 150 ESSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNGK 209
Query: 372 MEDKSVTKES-QNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSI 430
+ K+ RY+ A K+WG+ + + LT+ D + G+L QD F AE+ +
Sbjct: 210 QRKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIFSGTAVQV 269
Query: 431 MQDFAEHDXXXXXXXXXXXXXXXXXXFTWKVENFLSFKD 469
+ FTWK+ +F + +D
Sbjct: 270 QEKVT------------FISNPPNNVFTWKILHFSNLED 296
>AT3G58350.1 | Symbols: RTM3 | RESTRICTED TEV MOVEMENT 3 |
chr3:21591618-21592836 REVERSE LENGTH=301
Length = 301
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 288 KFTWRIENF-TRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLE 346
K TW I+NF + L DL I S F +G L YP+G ++ LS FL
Sbjct: 8 KITWTIKNFASLLSDL----------IYSDHFVVGGCKWHLRAYPKGYNNANS-LSLFLG 56
Query: 347 VTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTK--ESQNRYSKAAKDWGWREFVTLTSLF 404
V + S W RL++VNQ + S +K E + + + +WG L +
Sbjct: 57 VAVPTSLPSGWRRHTKFRLTLVNQLSDKLSQSKLNELEQWFDEKTTNWGLSSMCPLNEIH 116
Query: 405 DQDSGFLVQDTVIFSAEVLILK 426
+DSGFL+ + E+ +L+
Sbjct: 117 AKDSGFLLNGELKIVVEIKVLE 138
>AT3G58220.1 | Symbols: | TRAF-like family protein |
chr3:21565173-21566435 REVERSE LENGTH=351
Length = 351
Score = 53.9 bits (128), Expect = 8e-07, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 273 GRSGSGARKSDGHIGKFTWRIENFTRLKDLLKKRKITGL-CIKSRRFQIGNRDCRLIVYP 331
GR GS K++ F+W I++F+ L G+ I S F IG RLI YP
Sbjct: 2 GRIGSPLGKNE-----FSWVIKDFSSL----------GVRAIYSDEFVIGGCKWRLIAYP 46
Query: 332 RGQSHPPCHLSAFLEVTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNR-YSKAAK 390
G ++S ++EV DS++ S WS R+ VVN + S K +N + +
Sbjct: 47 MGNRIKK-YMSLYVEVADSKHLPSGWSINTELRMEVVNHNLYKPSQQKYRKNLWFDQKTP 105
Query: 391 DWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFAE 436
WG++ + + L ++ GFLV S EV I+ + + + F +
Sbjct: 106 SWGYKTMIRHSKLSGEE-GFLV------SGEVTIVVKIDVYRVFGK 144
>AT5G26280.2 | Symbols: | TRAF-like family protein |
chr5:9208724-9210403 FORWARD LENGTH=327
Length = 327
Score = 53.9 bits (128), Expect = 9e-07, Method: Composition-based stats.
Identities = 53/241 (21%), Positives = 96/241 (39%), Gaps = 43/241 (17%)
Query: 357 WSCFVSHRLSVVNQRMEDK-SVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDT 415
W V +L V N ++ +VT RY+ A K+WG+ + + ++ ++ + G+L QDT
Sbjct: 102 WEVNVDLKLFVHNGKLHKYLTVTDGLVKRYNNAKKEWGFGQLIPRSTFYNANEGYLDQDT 161
Query: 416 VIFSAEVLILKETSIMQDFAEHDXXXXXXXXXXXXXXXXXXFTWKVENFLSFKDIMETRK 475
F AE+ I+K + FTWK+ F + +D +
Sbjct: 162 GSFGAEIFIVKPAQQQEKVT------------FISNPPNNVFTWKILRFSTLED----KF 205
Query: 476 IFSKFFQAGGCELRIGVYESFD------TICIYLESDQAVGSDPDKNFWVRYRMAVVNQK 529
+S F R+G D + I+L + + N W + + NQ+
Sbjct: 206 YYSDDFLVEDRYWRLGFNPKGDGGGRPHALPIFLFAQGHKANAVATNTWGAVNLRLKNQR 265
Query: 530 NPAKTVWKESSICTKTW-----------NNSVLQFMKVSDMLEADAGFLVRDTVVFVCEI 578
+ I + W NN +L ++D+ +A G+LV D ++F E+
Sbjct: 266 ST-----NHRQIYSAAWYPIGSGYGVGVNNIIL----LADLNDASKGYLVNDAIIFEAEM 316
Query: 579 L 579
+
Sbjct: 317 V 317
>AT1G69660.1 | Symbols: | TRAF-like family protein |
chr1:26199623-26200603 REVERSE LENGTH=231
Length = 231
Score = 53.9 bits (128), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 288 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPC-HLSAFLE 346
KF+W ++NF+ LK+ + S ++ +G ++ L +YP+G S +LS ++
Sbjct: 96 KFSWNLKNFSELKEDV---------YTSNKYPMGGKEWVLKLYPKGNSRADGKYLSLYVH 146
Query: 347 VTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSL 403
+ DS SD F + V+N + V +S Y ++++ WGW F+++ +L
Sbjct: 147 LADSETLKSDEKNFKQGHVRVLNP-LGSNHVEVQSSCWYKESSRGWGWDHFLSIANL 202
>AT1G04300.4 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1055
Length = 1055
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 14/126 (11%)
Query: 307 KITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPC----HLSAFLEVTDSRNTSSDWSCFVS 362
+IT +S F+ G +++YP+G C HLS FL V + WS F
Sbjct: 60 EITKREHRSNVFEAGGYKWYILIYPQG-----CDVCNHLSLFLCVANYDKLLPGWSQFAQ 114
Query: 363 HRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVI-FSAE 421
+SV++Q ++ KS ++ +R+ K DWGW++F+ L L D GF+ + + A+
Sbjct: 115 FTISVLSQDLK-KSKFSDTLHRFWKKEHDWGWKKFMELPKLKD---GFIDESGCLTIEAK 170
Query: 422 VLILKE 427
V +++E
Sbjct: 171 VQVIRE 176
>AT4G09770.2 | Symbols: | TRAF-like family protein |
chr4:6154534-6155859 REVERSE LENGTH=297
Length = 297
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 288 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLEV 347
KFTW+I +F+ + D KR S F +G+R RL + P+G LS +++
Sbjct: 160 KFTWKISHFSYIGD---KR-----YYYSDEFVVGDRKWRLKISPKGDKKVRA-LSVYVQA 210
Query: 348 TDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDW-GWREFVTLTSLFDQ 406
+ S + RL ++NQ+ + + K + YS+ D G E +++ L D+
Sbjct: 211 MAYLPNAVASSTYAKLRLRLLNQKNSN-HIEKRVFHFYSRENGDGSGISELISVEDLNDE 269
Query: 407 DSGFLVQDTVIFSAEVLILKETSIM 431
G+LV+D+++ +L + +T ++
Sbjct: 270 SKGYLVEDSIVLETTLLWVSDTKVV 294
>AT4G09770.1 | Symbols: | TRAF-like family protein |
chr4:6154534-6155859 REVERSE LENGTH=297
Length = 297
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 288 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLEV 347
KFTW+I +F+ + D KR S F +G+R RL + P+G LS +++
Sbjct: 160 KFTWKISHFSYIGD---KR-----YYYSDEFVVGDRKWRLKISPKGDKKVRA-LSVYVQA 210
Query: 348 TDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDW-GWREFVTLTSLFDQ 406
+ S + RL ++NQ+ + + K + YS+ D G E +++ L D+
Sbjct: 211 MAYLPNAVASSTYAKLRLRLLNQKNSN-HIEKRVFHFYSRENGDGSGISELISVEDLNDE 269
Query: 407 DSGFLVQDTVIFSAEVLILKETSIM 431
G+LV+D+++ +L + +T ++
Sbjct: 270 SKGYLVEDSIVLETTLLWVSDTKVV 294
>AT2G42480.1 | Symbols: | TRAF-like family protein |
chr2:17685805-17689851 REVERSE LENGTH=743
Length = 743
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 20/140 (14%)
Query: 289 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLEVT 348
F + I+NF+ KD+ I S+ F G + L +YP+GQS H+S +L V
Sbjct: 8 FRFEIDNFSEKKDV----------IASKAFVSGGCEWFLYLYPKGQSLNDDHMSLYLSVA 57
Query: 349 DSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNR----YSKAAKDWGWREFVTLTSLF 404
+S++ S W SV+N+ DK + + + ++ + A WG R+ + L+
Sbjct: 58 NSKSLGSGWKRSAKFYFSVLNES--DKELYRSTISQEFCLFCVQALAWGIRKALPLSKF- 114
Query: 405 DQDSGFLVQDTVIFSAEVLI 424
++ GFL +D +I EV I
Sbjct: 115 -EEKGFLEKDKLI--VEVYI 131
>AT4G09780.1 | Symbols: | TRAF-like family protein |
chr4:6159538-6161378 REVERSE LENGTH=427
Length = 427
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 20/154 (12%)
Query: 288 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCHLSAFLEV 347
KFTW+I +F++L D KK S F +G R R+ + P+G LS +++
Sbjct: 214 KFTWKISDFSKLGD--KKYHY------SDEFVVGERKWRIKISPKGDKKVRA-LSVYVQA 264
Query: 348 TDSRNTSSDWSCFVSHRLSVVNQR----MEDKSVTKESQNRY------SKAAKD-WGWRE 396
+ + + + +L ++NQ+ +E + + S Y S+ +D +G E
Sbjct: 265 MEYLPNAVASTTYAKLKLQLMNQKNTNHIEKRGTYQTSFFLYLVFHFFSREKEDGYGTSE 324
Query: 397 FVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSI 430
+++ L D+ G+LV+DT++ +L + ET +
Sbjct: 325 LISVEDLNDESKGYLVEDTIVLETTLLCVTETKV 358
>AT5G26290.1 | Symbols: | TRAF-like family protein |
chr5:9226079-9227873 FORWARD LENGTH=333
Length = 333
Score = 51.2 bits (121), Expect = 5e-06, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 107/258 (41%), Gaps = 23/258 (8%)
Query: 326 RLIVYPRGQSHP--PCHLSAFLEVTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQN 383
RL++Y G H+S + ++ ++ + W V +L V N ++ + +
Sbjct: 85 RLVLYVNGNEKDGGKDHVSLYAKIVETESLPVGWEVNVDLKLFVYNGKLNKYLIV--TVK 142
Query: 384 RYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFAEHDXXXXX 443
RY+ A K+ G+ + + ++ +D + G+ QDT F AE+ I+K
Sbjct: 143 RYNNATKELGYGQLIPQSTFYDGNDGYREQDTGTFGAEIYIVKPAQ------------QK 190
Query: 444 XXXXXXXXXXXXXFTWKVENFLSFKDIMETRKIF-SKFFQAGGCELRIGVYESFDTICIY 502
FTWK+ +F + +D K++ S F G ++G+ + I+
Sbjct: 191 EKVTFISNPPDNVFTWKILHFSTLED-----KVYQSNEFLVGDRYWKLGLNPKGGLVPIF 245
Query: 503 LESDQAVGSDPDKNFWVRYRMAVVNQKNPAK-TVWKESSICTKTWNNSVLQFMKVSDMLE 561
L + + + + + NQ++ T + + + + +SD+ +
Sbjct: 246 LYAQGFKANAVVTTTYAATNLRLKNQRSSNHVTTYTAYWYLIPSGLGLGVNTIPLSDVKD 305
Query: 562 ADAGFLVRDTVVFVCEIL 579
A G++V D+++ E+L
Sbjct: 306 ASKGYVVNDSIIIEVEML 323
>AT3G28220.1 | Symbols: | TRAF-like family protein |
chr3:10524420-10526497 FORWARD LENGTH=370
Length = 370
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 129/304 (42%), Gaps = 47/304 (15%)
Query: 124 KVHNFSLFKDMIRTQKIMSPVFPAGECNLRISVYQ--STVNG--VDHLSMCLESKDTDKT 179
K+ +F F +K S F +G N + VY + G ++++SM ++ ++ T
Sbjct: 86 KIESFIKFATSPNAEKYESRPFESGGYNWTLIVYPKGNIKEGAPLNYVSMYVQIDNS--T 143
Query: 180 AALSDRSCWCLFRMSVLNQKPGSNHTHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFVGS 239
S + + + + N+K T++++ A G+ + +D
Sbjct: 144 LLNSPKEVYAEVKFFIYNRKEDKYLTYQET----DAKRFFLFKPYWGYGNVRPYTDVANP 199
Query: 240 DSGFLVD-DTAVFSTSFHVIKEFS-----SFSKNGAVIAGRSGSGARKSDGHIGKFTWRI 293
++G+L D D +F V + F+ SF+K+ H + W +
Sbjct: 200 NAGWLFDGDNVLFGVDVFVTEVFNKWEVFSFTKSL----------------HDRLYKWTL 243
Query: 294 ENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSHPPCH-LSAFLEVTDSRN 352
NF+ L+ K+ + S +F IG R L VYP G + LS ++ D +
Sbjct: 244 PNFSSLE---KQYYV------SDKFVIGGRSWALKVYPSGDGEGQGNSLSLYVVAVDVKP 294
Query: 353 TSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLV 412
++ +L ++NQR + K + K+ ++ +S A WG+++FV L D G LV
Sbjct: 295 YDK---IYLKAKLRIINQR-DSKHMEKKVES-WSDQANSWGFQKFVPFADLKDTSKGLLV 349
Query: 413 QDTV 416
DT+
Sbjct: 350 NDTL 353