Miyakogusa Predicted Gene

Lj1g3v1854340.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1854340.1 Non Chatacterized Hit- tr|G2Y6I6|G2Y6I6_BOTF4
Putative uncharacterized protein BofuT4_P035310.1
OS=B,46.15,5e-19,NODULIN,NULL; FLOTILLIN-RELATED,NULL,CUFF.28075.1
         (103 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G25260.1 | Symbols:  | SPFH/Band 7/PHB domain-containing memb...   126   3e-30
AT5G64870.1 | Symbols:  | SPFH/Band 7/PHB domain-containing memb...   125   8e-30
AT5G25250.1 | Symbols:  | SPFH/Band 7/PHB domain-containing memb...   115   4e-27

>AT5G25260.1 | Symbols:  | SPFH/Band 7/PHB domain-containing
           membrane-associated protein family |
           chr5:8752751-8754282 FORWARD LENGTH=463
          Length = 463

 Score =  126 bits (316), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/93 (59%), Positives = 74/93 (79%), Gaps = 2/93 (2%)

Query: 1   MGALGNNYAQLRDYLMINGGMYQELAKINADGIRGLQPKISIWNNGNGGAEGTDGSGANG 60
           + A+ N+Y+ LRD+LMIN G YQE+AK NA  +R LQPKIS+WN+G  G +G  G+  +G
Sbjct: 371 LDAVQNDYSCLRDFLMINNGTYQEIAKTNALAVRDLQPKISVWNHG--GEQGIGGASGSG 428

Query: 61  MKDVASIYKMLPPLFNTVHEQTGMLPPAWMGTI 93
           MKD+A +YKMLPP+ +TV+EQTGM PPAW+GT+
Sbjct: 429 MKDIAGLYKMLPPVLDTVYEQTGMQPPAWIGTL 461


>AT5G64870.1 | Symbols:  | SPFH/Band 7/PHB domain-containing
           membrane-associated protein family |
           chr5:25929776-25931308 REVERSE LENGTH=479
          Length = 479

 Score =  125 bits (313), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 74/93 (79%), Gaps = 1/93 (1%)

Query: 1   MGALGNNYAQLRDYLMINGGMYQELAKINADGIRGLQPKISIWNNGNGGAEGTDGSGANG 60
           +GA+ N+Y+ +RD+LMIN G+YQ++AK NA  IR LQPKIS+WN+G G  +G +G G   
Sbjct: 372 LGAVNNDYSAMRDFLMINNGIYQDIAKTNAVAIRDLQPKISVWNHG-GAEQGMNGGGKAT 430

Query: 61  MKDVASIYKMLPPLFNTVHEQTGMLPPAWMGTI 93
           M D+A +YKMLPP+ +TV+EQTGM PPAW+GT+
Sbjct: 431 MNDIAGLYKMLPPVLDTVYEQTGMQPPAWIGTL 463


>AT5G25250.1 | Symbols:  | SPFH/Band 7/PHB domain-containing
           membrane-associated protein family |
           chr5:8749774-8751430 FORWARD LENGTH=470
          Length = 470

 Score =  115 bits (289), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/93 (55%), Positives = 69/93 (74%), Gaps = 4/93 (4%)

Query: 1   MGALGNNYAQLRDYLMINGGMYQELAKINADGIRGLQPKISIWNNGNGGAEGTDGSGANG 60
           + A+ N+Y+ LRD+LMIN G+YQE+AK NA  +R LQPKIS+WN+         G   N 
Sbjct: 371 LDAVQNDYSCLRDFLMINNGIYQEIAKTNAMAVRDLQPKISVWNH----GGEQGGGSGNA 426

Query: 61  MKDVASIYKMLPPLFNTVHEQTGMLPPAWMGTI 93
           MKD+A +YKMLPP+ +TV+EQTGM PPAW+GT+
Sbjct: 427 MKDIAGLYKMLPPVLDTVYEQTGMQPPAWIGTL 459