Miyakogusa Predicted Gene

Lj1g3v1821080.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1821080.1 Non Chatacterized Hit- tr|K4DCC0|K4DCC0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,25.05,3e-17,
,CUFF.28101.1
         (430 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G25180.1 | Symbols: ARR12, RR12 | response regulator 12 | chr...    74   2e-13

>AT2G25180.1 | Symbols: ARR12, RR12 | response regulator 12 |
           chr2:10724490-10726961 REVERSE LENGTH=596
          Length = 596

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 175/430 (40%), Gaps = 95/430 (22%)

Query: 4   LQKYRLYLKRISSLSCMASQQTSMMAALGSIDRSYLKMGSMSGVGHLQPVNGLGQFHNNA 63
           LQK+RLYLKRIS +   A+QQ    A + + +  +++M  + G  H     G GQ+H  A
Sbjct: 243 LQKFRLYLKRISGV---ANQQ----AIMANSELHFMQMNGLDGFHHRPIPVGSGQYHGGA 295

Query: 64  --FKSFSPSGIISRLNTAAGLDVHGFQTSGVLQLGQSQYLNNFKDDQLNIQPATVPVN-- 119
              +SF P+GI+ RLNT +G+ V    +          +L N  D       +++P+N  
Sbjct: 296 PAMRSFPPNGILGRLNTPSGIGVRSLSSPPA-----GMFLQNQTDIGKFHHVSSLPLNHS 350

Query: 120 --PNRVRGMSVTMGLDQLQDNMGVIPVQNMTTDFDRRTTTSPISNKLPDQRARITTSVSH 177
              N ++G+ + +  DQLQ N       N + + +   + +  S   P    +  + +S 
Sbjct: 351 DGGNILQGLPMPLEFDQLQTN------NNKSRNMNSNKSIAGTSMAFPSFSTQQNSLIS- 403

Query: 178 TPLLGSLNNALMLETHPQDKPGGIGYENSSSAGAFQHSEIAFSLLDKGRYTDNWSSDVKS 237
                  NN ++LE HPQ  P G           F   +I        +  ++WS+ V S
Sbjct: 404 ----APNNNVVVLEGHPQATPPG-----------FPGHQI-------NKRLEHWSNAVSS 441

Query: 238 SAIMTNSYPPSECFRQTATPPSIDNMASLPLQGVNFTNKPGQTNSNVPFQGWDDHNQNAT 297
           S               T  PP   N  S+  Q   F   P   +   P + W+  N +++
Sbjct: 442 S---------------THPPPPAHNSNSINHQ---FDVSPLPHSRPDPLE-WN--NVSSS 480

Query: 298 YYSNVIDGSISSPTTVNEAVVPAGHTPTNSTMPKTLDYN---------FCDPLQMKRDGF 348
           Y       SI    + N    PA  T       +  D++         F  P     D  
Sbjct: 481 Y-------SIPFCDSANTLSSPALDTTNPRAFCRNTDFDSNTNVQPGVFYGP---STDAM 530

Query: 349 VELTEDTPLKQHQGNIMNQQKPQESCF-SNNFGSLEDLVYSMMAQEQHKMKLLDADLICD 407
             L+   P    +G ++ QQK Q   F   + GSL+D+V S M QEQ +  L   DL   
Sbjct: 531 ALLSSSNP---KEGFVVGQQKLQSGGFMVADAGSLDDIVNSTMKQEQSQGDLSGGDL--- 584

Query: 408 NYCGGISMLQ 417
              GG S L+
Sbjct: 585 -GYGGFSSLR 593