Miyakogusa Predicted Gene
- Lj1g3v1820910.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1820910.3 tr|G7J9W2|G7J9W2_MEDTR Chromatin remodeling
complex subunit OS=Medicago truncatula GN=MTR_3g106210
P,88.95,0,seg,NULL; SNF2_N,SNF2-related; Chromo,Chromo domain;
Helicase_C,Helicase, C-terminal; CHROMO_2,Chrom,CUFF.28143.3
(759 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 1160 0.0
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 816 0.0
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 738 0.0
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 506 e-143
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 505 e-143
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 376 e-104
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 376 e-104
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 376 e-104
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 373 e-103
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 373 e-103
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 358 5e-99
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 350 3e-96
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 331 1e-90
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 331 1e-90
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 331 1e-90
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 318 8e-87
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 318 1e-86
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 300 2e-81
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 288 1e-77
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 286 3e-77
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 243 3e-64
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 239 6e-63
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 213 5e-55
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 209 6e-54
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 202 6e-52
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 202 7e-52
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 200 3e-51
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 197 3e-50
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 191 1e-48
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 189 5e-48
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 135 9e-32
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 128 1e-29
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 115 1e-25
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 110 5e-24
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 98 2e-20
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 96 9e-20
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 96 1e-19
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 96 1e-19
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 96 1e-19
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 95 2e-19
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 82 1e-15
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 80 5e-15
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 78 2e-14
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 78 3e-14
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 77 4e-14
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 77 5e-14
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 76 7e-14
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 73 9e-13
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 71 2e-12
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 71 3e-12
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 69 1e-11
AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein / ... 68 2e-11
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 65 2e-10
AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases... 62 2e-09
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 61 3e-09
AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 60 4e-09
AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 60 4e-09
AT5G22760.1 | Symbols: | PHD finger family protein | chr5:75716... 53 8e-07
AT5G35210.1 | Symbols: | metalloendopeptidases;zinc ion binding... 52 2e-06
AT5G35210.2 | Symbols: | metalloendopeptidases;zinc ion binding... 51 2e-06
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 1160 bits (3002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/727 (77%), Positives = 623/727 (85%), Gaps = 13/727 (1%)
Query: 33 MSSLVERLRVRSDRRPVYNLDESDDDDLLPKKPGTVLENMERIVRSDAKEDSCQACGESG 92
MSSLVERLR+RSDR+PVYNLD+SDDDD +PKK T E +E IVR+DAKE++CQACGES
Sbjct: 1 MSSLVERLRIRSDRKPVYNLDDSDDDDFVPKKDRT-FEQVEAIVRTDAKENACQACGEST 59
Query: 93 NLLSCETCTYAYHSKCLLPPFKGPLPDNWRCPECVSPLNDIDKLLDCEMRPTVADDSDAT 152
NL+SC TCTYA+H+KCL+PP K +NWRCPECVSPLN+IDK+LDCEMRPT + + ++
Sbjct: 60 NLVSCNTCTYAFHAKCLVPPLKDASVENWRCPECVSPLNEIDKILDCEMRPTKSSEQGSS 119
Query: 153 KLGSKQTFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKNHPRLKTKVNNFHRQMASVNTSD 212
K FVKQYLVKWKGLSYLHC+WVPEKEF KA+K++ RLKT+VNNFHRQM S N S+
Sbjct: 120 DAEPKPIFVKQYLVKWKGLSYLHCSWVPEKEFQKAYKSNHRLKTRVNNFHRQMESFNNSE 179
Query: 213 EDFVAIRPEWTTVDRIIASRGGDDEEREYFVKWKELPYDECYWEYESDISAFQPEIEKFH 272
+DFVAIRPEWTTVDRI+A R +D E EY VK+KEL YDECYWE ESDIS FQ EI++F
Sbjct: 180 DDFVAIRPEWTTVDRILACRE-EDGELEYLVKYKELSYDECYWESESDISTFQNEIQRFK 238
Query: 273 XXXXXXXXXXXXXXXXNFKDDGELTKQQKEFQQYENSPEFLSGGTLHPYQLEGLNFLRFS 332
N +D FQQ++++PEFL G LHPYQLEGLNFLRFS
Sbjct: 239 DVNSRTRRSKDVDHKRNPRD----------FQQFDHTPEFLKG-LLHPYQLEGLNFLRFS 287
Query: 333 WSKQTHVILADEMGLGKTIQSIAFLASLYKEGISPHLVVAPLSTLRNWEREFATWAPQMN 392
WSKQTHVILADEMGLGKTIQSIA LASL++E + PHLV+APLSTLRNWEREFATWAPQMN
Sbjct: 288 WSKQTHVILADEMGLGKTIQSIALLASLFEENLIPHLVIAPLSTLRNWEREFATWAPQMN 347
Query: 393 VVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLD 452
VVMY G+AQAR VIRE+EFY SGQI SESKQ RIKFDVLLTSYEMINLD
Sbjct: 348 VVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLD 407
Query: 453 TTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHF 512
+ LKPIKWE MIVDEGHRLKNKDSKLFSSLTQYSS HR+LLTGTPLQNNLDELFMLMHF
Sbjct: 408 SAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHF 467
Query: 513 LDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVEL 572
LDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMK++PPKKELILRV+L
Sbjct: 468 LDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDL 527
Query: 573 SSKQKEYYKAILTRNYQLLTRRGGAQISLINVVMELRKLCCHPFMLEGVEPDIDDPKEFH 632
SS QKEYYKAI TRNYQ+LT++GGAQISL N++MELRK+CCHP+MLEGVEP I D E
Sbjct: 528 SSLQKEYYKAIFTRNYQVLTKKGGAQISLNNIMMELRKVCCHPYMLEGVEPVIHDANEAF 587
Query: 633 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGG 692
KQLLES GKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYC++KKW YERIDGKVGG
Sbjct: 588 KQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGG 647
Query: 693 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 752
AERQIRIDRFNAKNS++FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR
Sbjct: 648 AERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 707
Query: 753 LGQTNKV 759
LGQTNKV
Sbjct: 708 LGQTNKV 714
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/637 (64%), Positives = 495/637 (77%), Gaps = 42/637 (6%)
Query: 129 PLNDIDKLLDCEMRPTVADDSDATKLGSKQ-TFVKQYLVKWKGLSYLHCTWVPEKEFLKA 187
PL +I+K+LD E RPT +++ +++ G+ VKQYLVKWKGLSYLHC+WVPE+EF KA
Sbjct: 43 PLGEIEKILDREWRPTASNNPNSSDNGTPTLVVVKQYLVKWKGLSYLHCSWVPEQEFEKA 102
Query: 188 FKNHPRLKTK--VNNFHRQMAS--VNTSDEDFVAIRPEWTTVDRIIASRGGDDEEREYFV 243
+K+HP LK K V F+ M +F+AIRPEW TVDRIIA R GDD E EY V
Sbjct: 103 YKSHPHLKLKLRVTRFNAAMDVFIAENGAHEFIAIRPEWKTVDRIIACREGDDGE-EYLV 161
Query: 244 KWKELPYDECYWEYESDISAFQPEIEKFHXXXXXXXXXXXXXXXXNFKDDGELTKQQKEF 303
K+KEL Y YWE ESDIS FQ EI++F N ++EF
Sbjct: 162 KYKELSYRNSYWESESDISDFQNEIQRFKDINSSSRRDKYVENERN----------REEF 211
Query: 304 QQYENSPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYKE 363
+Q++ +PEFL+G TLH YQLEGLNFLR+SWSK+T+VILADEMGLGKTIQSIAFLASL++E
Sbjct: 212 KQFDLTPEFLTG-TLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEE 270
Query: 364 GISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXX 423
+SPHLVVAPLST+RNWEREFATWAP MNVVMY G ++AR VI E+EFYF
Sbjct: 271 NLSPHLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYF---------- 320
Query: 424 XSGQIVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSL 483
S+ + KFDVLLT+YEM++ + L PIKW MI+DEGHRLKN+ SKL+SSL
Sbjct: 321 --------SEGRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSL 372
Query: 484 TQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHKM 543
+Q++S+H VLLTGTPLQNNL+ELF LMHFLDA KFGSLE+FQ DIN+EEQISRLH+M
Sbjct: 373 SQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGSLEKFQ----DINKEEQISRLHQM 428
Query: 544 LAPHLLRRVKKDVMKE-LPPKKELILRVELSSKQKEYYKAILTRNYQLLTRRGGAQISLI 602
LAPHLLRR+KKDV+K+ +PPKKELILRV++SS+QKE YKA++T NYQ+LT++ A+IS
Sbjct: 429 LAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQVLTKKRDAKIS-- 486
Query: 603 NVVMELRKLCCHPFMLEGVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIY 662
NV+M+LR++C HP++L EP +D E +LLE+SGKLQLLDKMMVKLKEQGHRVLIY
Sbjct: 487 NVLMKLRQVCSHPYLLPDFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIY 546
Query: 663 TQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLG 722
TQFQH L LLEDY ++K W YERIDGK+ G ERQ+RIDRFNA+NS+RFCFLLSTRAGG+G
Sbjct: 547 TQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIG 606
Query: 723 INLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
INLATADTVIIYDSDWNPHADLQAMAR HRLGQTNKV
Sbjct: 607 INLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKV 643
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/547 (67%), Positives = 436/547 (79%), Gaps = 37/547 (6%)
Query: 214 DFVAIRPEWTTVDRIIASRGGDDEEREYFVKWKELPYDECYWEYESDISAFQPEIEKFHX 273
+F+AIRPEW TVDRIIA R GDD E EY VK+KEL Y YWE ESDIS FQ EI++F
Sbjct: 92 EFIAIRPEWKTVDRIIACREGDDGE-EYLVKYKELSYRNSYWESESDISDFQNEIQRFKD 150
Query: 274 XXXXXXXXXXXXXXXNFKDDGELTKQQKEFQQYENSPEFLSGGTLHPYQLEGLNFLRFSW 333
N ++EF+Q++ +PEFL+G TLH YQLEGLNFLR+SW
Sbjct: 151 INSSSRRDKYVENERN----------REEFKQFDLTPEFLTG-TLHTYQLEGLNFLRYSW 199
Query: 334 SKQTHVILADEMGLGKTIQSIAFLASLYKEGISPHLVVAPLSTLRNWEREFATWAPQMNV 393
SK+T+VILADEMGLGKTIQSIAFLASL++E +SPHLVVAPLST+RNWEREFATWAP MNV
Sbjct: 200 SKKTNVILADEMGLGKTIQSIAFLASLFEENLSPHLVVAPLSTIRNWEREFATWAPHMNV 259
Query: 394 VMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLDT 453
VMY G ++AR VI E+EFYF S+ + KFDVLLT+YEM++
Sbjct: 260 VMYTGDSEARDVIWEHEFYF------------------SEGRKSKFDVLLTTYEMVHPGI 301
Query: 454 TSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFL 513
+ L PIKW MI+DEGHRLKN+ SKL+SSL+Q++S+H VLLTGTPLQNNL+ELF LMHFL
Sbjct: 302 SVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFL 361
Query: 514 DAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKE-LPPKKELILRVEL 572
DA KFGSLE+FQ DIN+EEQISRLH+MLAPHLLRR+KKDV+K+ +PPKKELILRV++
Sbjct: 362 DADKFGSLEKFQ----DINKEEQISRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDM 417
Query: 573 SSKQKEYYKAILTRNYQLLTRRGGAQISLINVVMELRKLCCHPFMLEGVEPDIDDPKEFH 632
SS+QKE YKA++T NYQ+LT++ A+IS NV+M+LR++C HP++L EP +D E
Sbjct: 418 SSQQKEVYKAVITNNYQVLTKKRDAKIS--NVLMKLRQVCSHPYLLPDFEPRFEDANEAF 475
Query: 633 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGG 692
+LLE+SGKLQLLDKMMVKLKEQGHRVLIYTQFQH L LLEDY ++K W YERIDGK+ G
Sbjct: 476 TKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISG 535
Query: 693 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 752
ERQ+RIDRFNA+NS+RFCFLLSTRAGG+GINLATADTVIIYDSDWNPHADLQAMAR HR
Sbjct: 536 PERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHR 595
Query: 753 LGQTNKV 759
LGQTNKV
Sbjct: 596 LGQTNKV 602
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 506 bits (1304), Expect = e-143, Method: Compositional matrix adjust.
Identities = 283/617 (45%), Positives = 390/617 (63%), Gaps = 49/617 (7%)
Query: 163 QYLVKWKGLSYLHCTW--VPEKEFLKAFKNHPRLKTKVNN-------FHRQMASVN-TSD 212
++L+KWKG S+LHC W + + + L FK KV R+ VN S
Sbjct: 463 EFLIKWKGQSHLHCQWKTLSDLQNLSGFKKVLNYTKKVTEEIRYRTALSREEIEVNDVSK 522
Query: 213 EDFVAIRPEWTTVDRIIASR----GGDDEEREYFVKWKELPYDECYWEYESDISAFQPEI 268
E + I + + V+RIIA R G D EY VKW+ L Y E WE + DI+ Q I
Sbjct: 523 EMDLDIIKQNSQVERIIADRISKDGLGDVVPEYLVKWQGLSYAEATWEKDVDIAFAQVAI 582
Query: 269 EKFHXXXXXXXXXXXXXXXXNFKDDGELTKQQKEFQQYENSPEFLSGGTLHPYQLEGLNF 328
+++ + + TK + ++ + PE+L GGTL YQLEGLNF
Sbjct: 583 DEYKAREVSIAVQGKMV-------EQQRTKGKASLRKLDEQPEWLIGGTLRDYQLEGLNF 635
Query: 329 LRFSWSKQTHVILADEMGLGKTIQSIAFLASL--YKEGISPHLVVAPLSTLRNWEREFAT 386
L SW T+VILADEMGLGKT+QS++ L L ++ P LVV PLSTL NW +EF
Sbjct: 636 LVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPLSTLANWAKEFRK 695
Query: 387 WAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESKQDR-IKFDVLLTS 445
W P MN+++YVG+ +R V ++YEFY +E K R IKF+ LLT+
Sbjct: 696 WLPGMNIIVYVGTRASREVCQQYEFY-----------------NEKKVGRPIKFNALLTT 738
Query: 446 YEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDE 505
YE++ D L IKW ++VDE HRLKN +++L+++L ++S+++++L+TGTPLQN+++E
Sbjct: 739 YEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEE 798
Query: 506 LFMLMHFLDAGKFGSLEEFQEEFKDIN--QEEQISRLHKMLAPHLLRRVKKDVMKELPPK 563
L+ L+HFLD GKF + +EF E +K+++ E +++ LH L PH+LRRV KDV K LPPK
Sbjct: 799 LWALLHFLDPGKFKNKDEFVENYKNLSSFNESELANLHLELRPHILRRVIKDVEKSLPPK 858
Query: 564 KELILRVELSSKQKEYYKAILTRNYQLLTRR-GGAQISLINVVMELRKLCCHPFMLE--- 619
E ILRVE+S QK+YYK IL RN+ L + G Q+SL+N+V+EL+K C HPF+ E
Sbjct: 859 IERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESAD 918
Query: 620 -GVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSY 678
G DI+D + K +L SSGKL +LDK++V+L+E HRVLI++Q MLD+L +Y S
Sbjct: 919 HGYGGDINDNSKLDKIIL-SSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSL 977
Query: 679 KKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 738
+ + ++R+DG RQ +D FNA S FCFLLSTRAGGLGINLATADTV+I+DSDW
Sbjct: 978 RGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDW 1037
Query: 739 NPHADLQAMARAHRLGQ 755
NP DLQAM+RAHR+GQ
Sbjct: 1038 NPQNDLQAMSRAHRIGQ 1054
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 505 bits (1300), Expect = e-143, Method: Compositional matrix adjust.
Identities = 282/630 (44%), Positives = 395/630 (62%), Gaps = 46/630 (7%)
Query: 144 TVADDSDATKLGSK------QTFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKNHPRLKTK 197
TVAD+ + +K +T ++LVKW S +H TW+ E E LK K K
Sbjct: 527 TVADEEIEEPVAAKTSDLIGETVSYEFLVKWVDKSNIHNTWISEAE-LKGLA-----KRK 580
Query: 198 VNNFHRQ--MASVNTSDEDFVAIRPEWTTVDRIIASRGGDDEEREYFVKWKELPYDECYW 255
+ N+ + A +N ++ +W RI+A R + +E +VKW L YDEC W
Sbjct: 581 LENYKAKYGTAVINICED-------KWKQPQRIVALRVSKEGNQEAYVKWTGLAYDECTW 633
Query: 256 EYESDISAFQPEIEKFHXXXXXXXXXXXXXXXXNFKDDGELTKQQKEFQQYENSPEFLSG 315
E S +P ++ N K G T+++ E P+ L G
Sbjct: 634 E-----SLEEPILKHSSHLIDLFHQYEQKTLERNSK--GNPTRERGEVVTLTEQPQELRG 686
Query: 316 GTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYKE-GIS-PHLVVAP 373
G L +QLE LN+LR W K +VILADEMGLGKT+ + AFL+SLY E G++ P LV+ P
Sbjct: 687 GALFAHQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFGVARPCLVLVP 746
Query: 374 LSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESK 433
LST+ NW EF+ WAP +NVV Y GSA+ R +IR+YE++ + K
Sbjct: 747 LSTMPNWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWH-----------AKNSTGTTKK 795
Query: 434 QDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVL 493
KF+VLLT+YEM+ D++ L+ + WE ++VDEGHRLKN +SKLFS L +S +HRVL
Sbjct: 796 PTSYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVL 855
Query: 494 LTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVK 553
LTGTPLQNN+ E++ L++FL F SL F+E F D+ E++ L K++APH+LRR+K
Sbjct: 856 LTGTPLQNNIGEMYNLLNFLQPSSFPSLSSFEERFHDLTSAEKVEELKKLVAPHMLRRLK 915
Query: 554 KDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTR--RGGAQISLINVVMELRKL 611
KD M+ +PPK E ++ VEL+S Q EYY+A+LT+NYQ+L +G AQ S++N+VM+LRK+
Sbjct: 916 KDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKV 975
Query: 612 CCHPFMLEGVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDL 671
C HP+++ G EP+ + H +++S KL LL M+ L ++GHRVLI++Q +LD+
Sbjct: 976 CNHPYLIPGTEPESGSLEFLHDMRIKASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLLDI 1035
Query: 672 LEDYCS--YKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATAD 729
LEDY + + +ER+DG V A+RQ I RFN ++ +RF FLLSTRA GLGINLATAD
Sbjct: 1036 LEDYLNIEFGPKTFERVDGSVAVADRQAAIARFN-QDKNRFVFLLSTRACGLGINLATAD 1094
Query: 730 TVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
TVIIYDSD+NPHAD+QAM RAHR+GQ+ ++
Sbjct: 1095 TVIIYDSDFNPHADIQAMNRAHRIGQSKRL 1124
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 85 CQACGESGNLLSCETCTYAYHSKCLLPPFKGPLPDNWRCPEC------VSPLNDIDKL 136
C C G+LL C++C YH+ CL PP K W CP+C + P+N +D +
Sbjct: 78 CVICDLGGDLLCCDSCPRTYHTACLNPPLKRIPNGKWICPKCSPNSEALKPVNRLDAI 135
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/449 (46%), Positives = 291/449 (64%), Gaps = 31/449 (6%)
Query: 316 GTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYK-EGIS-PHLVVAP 373
G + YQL GLN+L + + ILADEMGLGKT+Q+I+ LA L++ GI+ PH+VVAP
Sbjct: 187 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAP 246
Query: 374 LSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESK 433
STL NW E + P + V ++G+ + R IRE +G
Sbjct: 247 KSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE------------DLLVAG------- 287
Query: 434 QDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVL 493
KFD+ +TS+EM + T+L+ W +I+DE HR+KN++S L ++ +S+ +R+L
Sbjct: 288 ----KFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLL 343
Query: 494 LTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---DINQEEQISRLHKMLAPHLLR 550
+TGTPLQNNL EL+ L++FL F S E F E F+ + +Q+E + +LHK+L P LLR
Sbjct: 344 ITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLR 403
Query: 551 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTRRGGAQISLINVVMELRK 610
R+K DV K LPPKKE IL+V +S QK+YYKA+L ++ + + GG + L+N+ M+LRK
Sbjct: 404 RLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVN-AGGERKRLLNIAMQLRK 462
Query: 611 LCCHPFMLEGVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLD 670
C HP++ +G EP P L+ ++GK+ LLDK++ KLKE+ RVLI++Q +LD
Sbjct: 463 CCNHPYLFQGAEP--GPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 671 LLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADT 730
+LEDY Y+ +LY RIDG GG ER I+ +N S +F FLLSTRAGGLGINLATAD
Sbjct: 521 ILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 580
Query: 731 VIIYDSDWNPHADLQAMARAHRLGQTNKV 759
VI+YDSDWNP DLQA RAHR+GQ +V
Sbjct: 581 VILYDSDWNPQVDLQAQDRAHRIGQKKEV 609
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/449 (46%), Positives = 291/449 (64%), Gaps = 31/449 (6%)
Query: 316 GTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYK-EGIS-PHLVVAP 373
G + YQL GLN+L + + ILADEMGLGKT+Q+I+ LA L++ GI+ PH+VVAP
Sbjct: 187 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAP 246
Query: 374 LSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESK 433
STL NW E + P + V ++G+ + R IRE +G
Sbjct: 247 KSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE------------DLLVAG------- 287
Query: 434 QDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVL 493
KFD+ +TS+EM + T+L+ W +I+DE HR+KN++S L ++ +S+ +R+L
Sbjct: 288 ----KFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLL 343
Query: 494 LTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---DINQEEQISRLHKMLAPHLLR 550
+TGTPLQNNL EL+ L++FL F S E F E F+ + +Q+E + +LHK+L P LLR
Sbjct: 344 ITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLR 403
Query: 551 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTRRGGAQISLINVVMELRK 610
R+K DV K LPPKKE IL+V +S QK+YYKA+L ++ + + GG + L+N+ M+LRK
Sbjct: 404 RLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVN-AGGERKRLLNIAMQLRK 462
Query: 611 LCCHPFMLEGVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLD 670
C HP++ +G EP P L+ ++GK+ LLDK++ KLKE+ RVLI++Q +LD
Sbjct: 463 CCNHPYLFQGAEP--GPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 671 LLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADT 730
+LEDY Y+ +LY RIDG GG ER I+ +N S +F FLLSTRAGGLGINLATAD
Sbjct: 521 ILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 580
Query: 731 VIIYDSDWNPHADLQAMARAHRLGQTNKV 759
VI+YDSDWNP DLQA RAHR+GQ +V
Sbjct: 581 VILYDSDWNPQVDLQAQDRAHRIGQKKEV 609
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/449 (46%), Positives = 291/449 (64%), Gaps = 31/449 (6%)
Query: 316 GTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYK-EGIS-PHLVVAP 373
G + YQL GLN+L + + ILADEMGLGKT+Q+I+ LA L++ GI+ PH+VVAP
Sbjct: 187 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAP 246
Query: 374 LSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESK 433
STL NW E + P + V ++G+ + R IRE +G
Sbjct: 247 KSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE------------DLLVAG------- 287
Query: 434 QDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVL 493
KFD+ +TS+EM + T+L+ W +I+DE HR+KN++S L ++ +S+ +R+L
Sbjct: 288 ----KFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLL 343
Query: 494 LTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---DINQEEQISRLHKMLAPHLLR 550
+TGTPLQNNL EL+ L++FL F S E F E F+ + +Q+E + +LHK+L P LLR
Sbjct: 344 ITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLR 403
Query: 551 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTRRGGAQISLINVVMELRK 610
R+K DV K LPPKKE IL+V +S QK+YYKA+L ++ + + GG + L+N+ M+LRK
Sbjct: 404 RLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVN-AGGERKRLLNIAMQLRK 462
Query: 611 LCCHPFMLEGVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLD 670
C HP++ +G EP P L+ ++GK+ LLDK++ KLKE+ RVLI++Q +LD
Sbjct: 463 CCNHPYLFQGAEP--GPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 671 LLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADT 730
+LEDY Y+ +LY RIDG GG ER I+ +N S +F FLLSTRAGGLGINLATAD
Sbjct: 521 ILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 580
Query: 731 VIIYDSDWNPHADLQAMARAHRLGQTNKV 759
VI+YDSDWNP DLQA RAHR+GQ +V
Sbjct: 581 VILYDSDWNPQVDLQAQDRAHRIGQKKEV 609
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/449 (46%), Positives = 291/449 (64%), Gaps = 31/449 (6%)
Query: 316 GTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYK-EGIS-PHLVVAP 373
G L YQL GLN+L + + ILADEMGLGKT+Q+I+ LA L++ GI+ PH+VVAP
Sbjct: 192 GKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAP 251
Query: 374 LSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESK 433
STL NW E + P + V ++G+ + R IRE +G
Sbjct: 252 KSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE------------ELLVAG------- 292
Query: 434 QDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVL 493
KFD+ +TS+EM + T+L+ W +I+DE HR+KN++S L ++ +S+ +R+L
Sbjct: 293 ----KFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLL 348
Query: 494 LTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---DINQEEQISRLHKMLAPHLLR 550
+TGTPLQNNL EL+ L++FL F S E F E F+ + +Q+E + +LHK+L P LLR
Sbjct: 349 ITGTPLQNNLHELWALLNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLR 408
Query: 551 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTRRGGAQISLINVVMELRK 610
R+K DV K LPPKKE IL+V +S QK+YYKA+L ++ +++ GG + L+N+ M+LRK
Sbjct: 409 RLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVN-GGGERKRLLNIAMQLRK 467
Query: 611 LCCHPFMLEGVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLD 670
C HP++ +G EP P L+ ++GK+ LLDK++ KLK++ RVLI++Q +LD
Sbjct: 468 CCNHPYLFQGAEP--GPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLD 525
Query: 671 LLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADT 730
+LEDY Y+ + Y RIDG GG ER I+ +N S +F FLLSTRAGGLGINLATAD
Sbjct: 526 ILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 585
Query: 731 VIIYDSDWNPHADLQAMARAHRLGQTNKV 759
VI+YDSDWNP DLQA RAHR+GQ +V
Sbjct: 586 VILYDSDWNPQVDLQAQDRAHRIGQKKEV 614
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/449 (46%), Positives = 291/449 (64%), Gaps = 31/449 (6%)
Query: 316 GTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYK-EGIS-PHLVVAP 373
G L YQL GLN+L + + ILADEMGLGKT+Q+I+ LA L++ GI+ PH+VVAP
Sbjct: 192 GKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAP 251
Query: 374 LSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESK 433
STL NW E + P + V ++G+ + R IRE +G
Sbjct: 252 KSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE------------ELLVAG------- 292
Query: 434 QDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVL 493
KFD+ +TS+EM + T+L+ W +I+DE HR+KN++S L ++ +S+ +R+L
Sbjct: 293 ----KFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLL 348
Query: 494 LTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---DINQEEQISRLHKMLAPHLLR 550
+TGTPLQNNL EL+ L++FL F S E F E F+ + +Q+E + +LHK+L P LLR
Sbjct: 349 ITGTPLQNNLHELWALLNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLR 408
Query: 551 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTRRGGAQISLINVVMELRK 610
R+K DV K LPPKKE IL+V +S QK+YYKA+L ++ +++ GG + L+N+ M+LRK
Sbjct: 409 RLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVN-GGGERKRLLNIAMQLRK 467
Query: 611 LCCHPFMLEGVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLD 670
C HP++ +G EP P L+ ++GK+ LLDK++ KLK++ RVLI++Q +LD
Sbjct: 468 CCNHPYLFQGAEP--GPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLD 525
Query: 671 LLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADT 730
+LEDY Y+ + Y RIDG GG ER I+ +N S +F FLLSTRAGGLGINLATAD
Sbjct: 526 ILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 585
Query: 731 VIIYDSDWNPHADLQAMARAHRLGQTNKV 759
VI+YDSDWNP DLQA RAHR+GQ +V
Sbjct: 586 VILYDSDWNPQVDLQAQDRAHRIGQKKEV 614
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 358 bits (920), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 203/465 (43%), Positives = 280/465 (60%), Gaps = 43/465 (9%)
Query: 310 PEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLY--KEGISP 367
P L GG L YQLEGL ++ ++ + ILADEMGLGKTIQ+IA +A L K+ P
Sbjct: 378 PSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDLHGP 437
Query: 368 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQ 427
HL++AP + L NWE EFA WAP ++ +Y GS + RT IR +
Sbjct: 438 HLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIR------------------AR 479
Query: 428 IVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSL-TQY 486
I KF+VL+T Y++I D LK I W MIVDEGHRLKN + L +L T Y
Sbjct: 480 IAGG------KFNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGY 533
Query: 487 SSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---------DINQEEQ- 536
+ R+LLTGTP+QN+L EL+ L++FL F S+ F+E F + EE+
Sbjct: 534 RIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEEL 593
Query: 537 --ISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTRR 594
I+RLH ++ P LLRR K +V K LP K ++IL+ ++S+ QK YYK + L
Sbjct: 594 LIINRLHHVIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSG 653
Query: 595 GGAQISLINVVMELRKLCCHPFMLEGVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKE 654
G SL N+ M+LRK C HP++ G + ++ E ++ +SGK +LLD+++ KLK+
Sbjct: 654 NGKSKSLQNLTMQLRKCCNHPYLFVGADYNMCKKPE----IVRASGKFELLDRLLPKLKK 709
Query: 655 QGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLL 714
GHR+L+++Q ++DLLE Y S ++Y R+DG +R I + +FN +S F FLL
Sbjct: 710 AGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLL 769
Query: 715 STRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
STRAGGLG+NL TADT+II+DSDWNP D QA RAHR+GQ +V
Sbjct: 770 STRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEV 814
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 350 bits (897), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 202/494 (40%), Positives = 292/494 (59%), Gaps = 50/494 (10%)
Query: 289 NFKDDGELTKQQKEF--------QQYENSPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVI 340
N D +L + Q+++ ++ P L GG L YQLEGL ++ ++ + I
Sbjct: 366 NNDDSNDLLEGQRQYNSAIHSIQEKVTEQPSLLEGGELRSYQLEGLQWMVSLFNNNLNGI 425
Query: 341 LADEMGLGKTIQSIAFLASLYK-EGI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVG 398
LADEMGLGKTIQ+I+ +A L + +G+ P+L+VAP + L NW EFATW P + +Y G
Sbjct: 426 LADEMGLGKTIQTISLIAYLLENKGVPGPYLIVAPKAVLPNWVNEFATWVPSIAAFLYDG 485
Query: 399 SAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLDTTSLKP 458
+ R IRE +I E K F+VL+T Y++I D LK
Sbjct: 486 RLEERKAIRE------------------KIAGEGK-----FNVLITHYDLIMRDKAFLKK 522
Query: 459 IKWESMIVDEGHRLKNKDSKLFSSL-TQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGK 517
I+W MIVDEGHRLKN +S L +L T Y + R+LLTGTP+QN+L EL+ L++FL
Sbjct: 523 IEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHI 582
Query: 518 FGSLEEFQEEFK---------DINQEEQ---ISRLHKMLAPHLLRRVKKDVMKELPPKKE 565
F S++ F+E F + EE+ I RLH ++ P +LRR K +V K LP K +
Sbjct: 583 FNSVQNFEEWFNAPFADRGNVSLTDEEELLIIHRLHHVIRPFILRRKKDEVEKFLPGKTQ 642
Query: 566 LILRVELSSKQKEYYKAILTRNYQLLTRRGGAQISLINVVMELRKLCCHPFMLEGVEPDI 625
+IL+ ++S+ QK YYK + L G SL N+ M+LRK C HP++ G + ++
Sbjct: 643 VILKCDMSAWQKVYYKQVTDMGRVGLQTGSGKSKSLQNLTMQLRKCCNHPYLFVGGDYNM 702
Query: 626 DDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYER 685
E ++ +SGK +LLD+++ KL++ GHR+L+++Q ++D+LE Y + + Y R
Sbjct: 703 WKKPE----IVRASGKFELLDRLLPKLRKAGHRILLFSQMTRLIDVLEIYLTLNDYKYLR 758
Query: 686 IDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQ 745
+DG +R + + +FN +S F FLLSTRAGGLG+NL TADTVII+DSDWNP D Q
Sbjct: 759 LDGTTKTDQRGLLLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQ 818
Query: 746 AMARAHRLGQTNKV 759
A RAHR+GQ +V
Sbjct: 819 AEDRAHRIGQKKEV 832
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 331 bits (849), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/475 (41%), Positives = 268/475 (56%), Gaps = 53/475 (11%)
Query: 310 PEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLY--KEGISP 367
P L GG L YQ+ GL +L ++ + ILADEMGLGKT+Q I+ + L K P
Sbjct: 746 PSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGP 805
Query: 368 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGSA-QARTVIREYEFYFPXXXXXXXXXXSG 426
LVV P S L W+ E WAP ++ ++Y G+ + R + +E
Sbjct: 806 FLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKE------------------ 847
Query: 427 QIVSESKQDRIKFDVLLTSYE--MINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLT 484
QIV + KF+VLLT+YE M D L I W +I+DEGHR+KN KL + L
Sbjct: 848 QIVHQ------KFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLK 901
Query: 485 QYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQ-------- 536
Y S HR+LLTGTPLQNNL+EL+ L++FL F S E+F + F Q
Sbjct: 902 HYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEAL 961
Query: 537 ---------ISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRN 587
I+RLH++L P +LRR+K V ELP K E ++R E S+ Y K ++ R
Sbjct: 962 LSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASA----YQKLLMKRV 1017
Query: 588 YQLLTRRGGAQISLI-NVVMELRKLCCHPFMLEGVEPDIDD--PKEFHKQLLESSGKLQL 644
L G A+ + N VMELR +C HP++ + ++++ PK F ++ GKL++
Sbjct: 1018 EDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLCGKLEM 1077
Query: 645 LDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNA 704
LD+M+ KLK HRVL ++ +LD++EDY + K + Y R+DG+ G +R ID FN
Sbjct: 1078 LDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNK 1137
Query: 705 KNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
S F FLLS RAGG+G+NL ADTVI++D+DWNP DLQA ARAHR+GQ V
Sbjct: 1138 SGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDV 1192
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 331 bits (849), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/475 (41%), Positives = 268/475 (56%), Gaps = 53/475 (11%)
Query: 310 PEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLY--KEGISP 367
P L GG L YQ+ GL +L ++ + ILADEMGLGKT+Q I+ + L K P
Sbjct: 746 PSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGP 805
Query: 368 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGSA-QARTVIREYEFYFPXXXXXXXXXXSG 426
LVV P S L W+ E WAP ++ ++Y G+ + R + +E
Sbjct: 806 FLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKE------------------ 847
Query: 427 QIVSESKQDRIKFDVLLTSYE--MINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLT 484
QIV + KF+VLLT+YE M D L I W +I+DEGHR+KN KL + L
Sbjct: 848 QIVHQ------KFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLK 901
Query: 485 QYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQ-------- 536
Y S HR+LLTGTPLQNNL+EL+ L++FL F S E+F + F Q
Sbjct: 902 HYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEAL 961
Query: 537 ---------ISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRN 587
I+RLH++L P +LRR+K V ELP K E ++R E S+ Y K ++ R
Sbjct: 962 LSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASA----YQKLLMKRV 1017
Query: 588 YQLLTRRGGAQISLI-NVVMELRKLCCHPFMLEGVEPDIDD--PKEFHKQLLESSGKLQL 644
L G A+ + N VMELR +C HP++ + ++++ PK F ++ GKL++
Sbjct: 1018 EDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLCGKLEM 1077
Query: 645 LDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNA 704
LD+M+ KLK HRVL ++ +LD++EDY + K + Y R+DG+ G +R ID FN
Sbjct: 1078 LDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNK 1137
Query: 705 KNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
S F FLLS RAGG+G+NL ADTVI++D+DWNP DLQA ARAHR+GQ V
Sbjct: 1138 SGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDV 1192
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/475 (41%), Positives = 268/475 (56%), Gaps = 53/475 (11%)
Query: 310 PEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLY--KEGISP 367
P L GG L YQ+ GL +L ++ + ILADEMGLGKT+Q I+ + L K P
Sbjct: 746 PSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGP 805
Query: 368 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGSA-QARTVIREYEFYFPXXXXXXXXXXSG 426
LVV P S L W+ E WAP ++ ++Y G+ + R + +E
Sbjct: 806 FLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKE------------------ 847
Query: 427 QIVSESKQDRIKFDVLLTSYE--MINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLT 484
QIV + KF+VLLT+YE M D L I W +I+DEGHR+KN KL + L
Sbjct: 848 QIVHQ------KFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLK 901
Query: 485 QYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQ-------- 536
Y S HR+LLTGTPLQNNL+EL+ L++FL F S E+F + F Q
Sbjct: 902 HYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEAL 961
Query: 537 ---------ISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRN 587
I+RLH++L P +LRR+K V ELP K E ++R E S+ Y K ++ R
Sbjct: 962 LSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASA----YQKLLMKRV 1017
Query: 588 YQLLTRRGGAQISLI-NVVMELRKLCCHPFMLEGVEPDIDD--PKEFHKQLLESSGKLQL 644
L G A+ + N VMELR +C HP++ + ++++ PK F ++ GKL++
Sbjct: 1018 EDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLCGKLEM 1077
Query: 645 LDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNA 704
LD+M+ KLK HRVL ++ +LD++EDY + K + Y R+DG+ G +R ID FN
Sbjct: 1078 LDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNK 1137
Query: 705 KNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
S F FLLS RAGG+G+NL ADTVI++D+DWNP DLQA ARAHR+GQ V
Sbjct: 1138 SGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDV 1192
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 318 bits (815), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 184/477 (38%), Positives = 278/477 (58%), Gaps = 45/477 (9%)
Query: 305 QYENSP----EFLSGGTLHPYQLEGLNFLRFSWSKQTHVILA-DEMGLGKTIQSIAFLAS 359
++ N+P EF TL P+Q+EG+++L + +V+L D+MGLGKT+Q+I+FL+
Sbjct: 34 KFSNTPPDCSEFGVTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSY 93
Query: 360 L-YKEGI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXX 417
L +++G+ P LV+ PLS W E + P + V+ YVG R +R+ +
Sbjct: 94 LKFRQGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMY------ 147
Query: 418 XXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDS 477
G + FDVLLT+Y++ +D L I W+ I+DE RLKN +S
Sbjct: 148 ------DHGHF--------LPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNS 193
Query: 478 KLFSSLT-QYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDI----- 531
L++ L Q+ R+L+TGTP+QNNL EL+ LMHF FG+L++F FK+
Sbjct: 194 VLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKETGDGLD 253
Query: 532 --NQEEQISRLHKMLAPHLLRRVKKDVMKE----LPPKKELILRVELSSKQKEYYKAILT 585
N +E L +L +LRR K +++ LPP EL + V L S QK+ Y +IL
Sbjct: 254 VSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILR 313
Query: 586 RNYQLL---TRRGGAQISLINVVMELRKLCCHPFMLEGVEPDIDDPKEFHKQLLESSGKL 642
+ L + G SL N+V++LRK C HP++ G+EP+ P E + L+++SGKL
Sbjct: 314 KELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPE---PFEEGEHLVQASGKL 370
Query: 643 QLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRF 702
+LD+++ +L + GHRVL+++Q LD+L+D+ +++ YER+DG V ER I F
Sbjct: 371 LVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNF 430
Query: 703 NAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
+ S+ F F++STRAGG+G+NL ADTVI Y+ DWNP D QA+ RAHR+GQ + V
Sbjct: 431 SVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHV 487
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 187/490 (38%), Positives = 282/490 (57%), Gaps = 52/490 (10%)
Query: 305 QYENSP----EFLSGGTLHPYQLEGLNFLRFSWSKQTHVILA-DEMGLGKTIQSIAFLAS 359
++ N+P EF TL P+Q+EG+++L + +V+L D+MGLGKT+Q+I+FL+
Sbjct: 34 KFSNTPPDCSEFGVTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSY 93
Query: 360 L-YKEGI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXX 417
L +++G+ P LV+ PLS W E + P + V+ YVG R +R+ +
Sbjct: 94 LKFRQGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMY------ 147
Query: 418 XXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDS 477
+ SK + FDVLLT+Y++ +D L I W+ I+DE RLKN +S
Sbjct: 148 --------DHVKKSSKGHFLPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNS 199
Query: 478 KLFSSLT-QYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDI----- 531
L++ L Q+ R+L+TGTP+QNNL EL+ LMHF FG+L++F FK+
Sbjct: 200 VLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKETGDGLS 259
Query: 532 -----NQEEQISRLHKMLAPHLLRRVKKDVMKE----LPPKKELILRVELSSKQKEYYKA 582
N +E L +L +LRR K +++ LPP EL + V L S QK+ Y +
Sbjct: 260 GLDVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTS 319
Query: 583 ILTRNYQLL---TRRGGAQISLINVVMELRKLCCHPFMLEGVEPDIDDPKEFHKQLLESS 639
IL + L + G SL N+V++LRK C HP++ G+EP+ P E + L+++S
Sbjct: 320 ILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPE---PFEEGEHLVQAS 376
Query: 640 GKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRI 699
GKL +LD+++ +L + GHRVL+++Q LD+L+D+ +++ YER+DG V ER I
Sbjct: 377 GKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAI 436
Query: 700 DRFNAK----------NSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMAR 749
F+AK S+ F F++STRAGG+G+NL ADTVI Y+ DWNP D QA+ R
Sbjct: 437 KNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQR 496
Query: 750 AHRLGQTNKV 759
AHR+GQ + V
Sbjct: 497 AHRIGQISHV 506
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 194/497 (39%), Positives = 284/497 (57%), Gaps = 51/497 (10%)
Query: 291 KDDGE-----LTKQQKEFQQYENSPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEM 345
K+DGE LT+++ + L+GG L YQL+G+ +L W + ILAD+M
Sbjct: 170 KEDGETINSDLTEEETVIKLQNELCPLLTGGQLKSYQLKGVKWLISLWQNGLNGILADQM 229
Query: 346 GLGKTIQSIAFLASLYKEGI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQART 404
GLGKTIQ+I FL+ L G+ P+LV+APLSTL NW E A + P +N ++Y G R
Sbjct: 230 GLGKTIQTIGFLSHLKGNGLDGPYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRD 289
Query: 405 VIREYEFYFPXXXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLDTTS-LKPIKWES 463
+R + P K KF +++TSYE+ D L+ W+
Sbjct: 290 ELRRK--HMP------------------KTVGPKFPIVITSYEVAMNDAKRILRHYPWKY 329
Query: 464 MIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEE 523
+++DEGHRLKN KL L +++LLTGTPLQNNL EL+ L++F+ F S +E
Sbjct: 330 VVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHDE 389
Query: 524 FQE--EFKDINQEEQ------------ISRLHKMLAPHLLRRVKKDVMKELPPKKELILR 569
F+ +F + N+ E +S+LH +L P +LRR+K DV LP KKE+I+
Sbjct: 390 FESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMKCDVELSLPRKKEIIMY 449
Query: 570 VELSSKQKEYYKAILTRNYQL-----LTRRGGAQISLINVVMELRKLCCHPFMLEGVEPD 624
++ QK++ + ++ + R G + L N+V++LRK C HP +L+G
Sbjct: 450 ATMTDHQKKFQEHLVNNTLEAHLGENAIRGQGWKGKLNNLVIQLRKNCNHPDLLQG---Q 506
Query: 625 IDDPKEFH--KQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWL 682
ID + ++++ GK +LL++++V+L H+VLI++Q+ +LD+++ Y S K +
Sbjct: 507 IDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHKVLIFSQWTKLLDIMDYYFSEKGFE 566
Query: 683 YERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 742
RIDG V ER+ +I F+ + SS FLLSTRAGGLGINL ADT I+YDSDWNP
Sbjct: 567 VCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQM 626
Query: 743 DLQAMARAHRLGQTNKV 759
DLQAM R HR+GQT V
Sbjct: 627 DLQAMDRCHRIGQTKPV 643
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 288 bits (737), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 181/484 (37%), Positives = 265/484 (54%), Gaps = 63/484 (13%)
Query: 310 PEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL--YKEGISP 367
P L GTL YQL GL ++ ++ + + ILADEMGLGKT+Q +A +A L +K P
Sbjct: 973 PSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGP 1032
Query: 368 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQ 427
HL++ P + L NW+ E TW P ++ + YVG+ R+ + E
Sbjct: 1033 HLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEVCA-------------- 1078
Query: 428 IVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYS 487
+KF+VL+T+YE I D + L + W+ +I+DE R+K+++S L L +Y
Sbjct: 1079 ---------MKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYR 1129
Query: 488 SRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQ----------- 536
+ R+LLTGTPLQN+L EL+ L++ L F + + F + F Q+E
Sbjct: 1130 CQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLE 1189
Query: 537 -------ISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY---KAILTR 586
I RLH++L P +LRR +DV LP K ++LR +S+ Q Y KA T
Sbjct: 1190 TEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTL 1249
Query: 587 NYQLLTRRGGAQISLI----------NVVMELRKLCCHPFMLEGVEPDIDD-PKEFHKQL 635
+ AQ + I N MELRK C HP + P +D K+F L
Sbjct: 1250 RVDPDDEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLL---NYPYFNDFSKDF---L 1303
Query: 636 LESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAER 695
+ S GKL +LD++++KL+ GHRVL+++ +LD+LE+Y +++ +Y RIDG +R
Sbjct: 1304 VRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDR 1363
Query: 696 QIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQ 755
+ I FN ++ F FLLS RA G G+NL TADTV+IYD D NP + QA+ARAHR+GQ
Sbjct: 1364 ESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQ 1423
Query: 756 TNKV 759
T +V
Sbjct: 1424 TREV 1427
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 182/484 (37%), Positives = 268/484 (55%), Gaps = 64/484 (13%)
Query: 310 PEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL--YKEGISP 367
P L GTL YQL GL ++ ++ + + ILADEMGLGKT+Q +A +A L +K P
Sbjct: 973 PSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGP 1032
Query: 368 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQ 427
HL++ P + L NW+ E TW P ++ + YVG+ R+ +
Sbjct: 1033 HLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRS----------------------K 1070
Query: 428 IVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYS 487
+ S+ K + KF+VL+T+YE I D + L + W+ +I+DE R+K+++S L L +Y
Sbjct: 1071 LFSQVKFE--KFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYR 1128
Query: 488 SRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQ----------- 536
+ R+LLTGTPLQN+L EL+ L++ L F + + F + F Q+E
Sbjct: 1129 CQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLE 1188
Query: 537 -------ISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY---KAILTR 586
I RLH++L P +LRR +DV LP K ++LR +S+ Q Y KA T
Sbjct: 1189 TEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTL 1248
Query: 587 NYQLLTRRGGAQISLI----------NVVMELRKLCCHPFMLEGVEPDIDD-PKEFHKQL 635
+ AQ + I N MELRK C HP + P +D K+F L
Sbjct: 1249 RVDPDDEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLL---NYPYFNDFSKDF---L 1302
Query: 636 LESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAER 695
+ S GKL +LD++++KL+ GHRVL+++ +LD+LE+Y +++ +Y RIDG +R
Sbjct: 1303 VRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDR 1362
Query: 696 QIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQ 755
+ I FN ++ F FLLS RA G G+NL TADTV+IYD D NP + QA+ARAHR+GQ
Sbjct: 1363 ESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQ 1422
Query: 756 TNKV 759
T +V
Sbjct: 1423 TREV 1426
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 173/516 (33%), Positives = 252/516 (48%), Gaps = 96/516 (18%)
Query: 318 LHPYQLEGLNFLRFSWSKQTH-VILADEMGLGKTIQSIAFLASLYK--EGISPHLVVAPL 374
L PYQL G+NFL + K ILADEMGLGKTIQ+I +L L + PHLVV P
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 375 STLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESKQ 434
S L NWERE W P V+ Y G+A+A S ++ S SK
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHGAARA--------------------AYSRELNSLSKA 312
Query: 435 DRIK-FDVLLTSYEMINL-------DTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQY 486
+ F+VLL Y + D LK +W +++DE H LK+K+S + +L
Sbjct: 313 GKPPPFNVLLVCYSLFERHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSV 372
Query: 487 S--SRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHKML 544
+ + R++LTGTPLQN+L EL+ L+ F+ F + ++ + E I+R+ +L
Sbjct: 373 ARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTTENVDLKKLLNAEDTELITRMKSIL 432
Query: 545 APHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTRRGGAQIS---- 600
P +LRR+K DVM++L PK + + V + KQ++ YK + Y+ ++ ++S
Sbjct: 433 GPFILRRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAI-EEYRAASQARLVKLSSKSL 491
Query: 601 -----------LINVVMELRKLCCHPFMLEGVEPD------------------------- 624
+ N + RK+ HP ++ + D
Sbjct: 492 NSLAKALPKRQISNYFTQFRKIANHPLLIRRIYSDEDVIRIARKLHPIGAFGFECSLDRV 551
Query: 625 IDDPKEF-----HKQLLES----------------SGKLQLLDKMMVKLKEQGHRVLIYT 663
I++ K F H+ L + S K + L +++ +K+ GHRVLI++
Sbjct: 552 IEEVKGFNDFRIHQLLFQYGVNDTKGTLSDKHVMLSAKCRTLAELLPSMKKSGHRVLIFS 611
Query: 664 QFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGI 723
Q+ MLD+LE Y R+DG +RQ +D FN + S F LLSTRAGG G+
Sbjct: 612 QWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFN-NDKSIFACLLSTRAGGQGL 670
Query: 724 NLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
NL ADTVII+D D+NP D QA R HR+GQT V
Sbjct: 671 NLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPV 706
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 239 bits (610), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 159/474 (33%), Positives = 243/474 (51%), Gaps = 45/474 (9%)
Query: 318 LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL-YKEGISPHLVVAPLST 376
L YQ G+ +L ++ I+ DEMGLGKTIQ ++FL SL + + P +++ P++
Sbjct: 385 LFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGSLHFSKMYKPSIIICPVTL 444
Query: 377 LRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESKQDR 436
LR W RE W P +V + SAQ + S ++
Sbjct: 445 LRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKASESDYDSESSVDSDH--EPKSKNT 502
Query: 437 IKFD------------VLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLT 484
K+D +L+T+YE + L L I+W ++DEGHR++N +S +
Sbjct: 503 KKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNSDITLVCK 562
Query: 485 QYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK--------DINQEEQ 536
Q + HR+++TG P+QN L EL+ L F+ GK G L F+ EF Q
Sbjct: 563 QLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYANASPLQ 622
Query: 537 ISR-------LHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQ 589
+S L ++ P+LLRR+K DV L K E +L L+ +Q+ Y+A L + +
Sbjct: 623 VSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYRAFLA-SSE 681
Query: 590 LLTRRGGAQISLINVVMELRKLCCHPFMLE----GVEPDIDDPKEFHKQLLESSGKLQLL 645
+ G + SL + + +RK+C HP +LE PD +P E SGK++++
Sbjct: 682 VEQIFDGNRNSLYGIDV-MRKICNHPDLLEREHSHQNPDYGNP--------ERSGKMKVV 732
Query: 646 DKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAK 705
+++ K+QGHRVL+++Q Q MLD+LE + ++ Y R+DG +R ID FN
Sbjct: 733 AEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFN-N 791
Query: 706 NSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
+ F F+L+T+ GGLG NL A+ VII+D DWNP D+QA RA R+GQ V
Sbjct: 792 SEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDV 845
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 155/506 (30%), Positives = 254/506 (50%), Gaps = 96/506 (18%)
Query: 318 LHPYQLEGLNFLRFSWSKQTHV---ILADEMGLGKTIQSIAFLASLYKEG-ISPHLVVAP 373
L+P+Q EGLN+L WS T IL D+MGLGKT+Q +FLA L+ I LVVAP
Sbjct: 377 LYPHQREGLNWL---WSLHTQGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKRALVVAP 433
Query: 374 LSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESK 433
+ L +W +E AT Y G++ T REY+ + + + K
Sbjct: 434 KTLLPHWMKELATVGLSQMTREYYGTS---TKAREYDLHH---------------ILQGK 475
Query: 434 QDRIKFDVLLTSYEMINLDTTSLKP------------IKWESMIVDEGHRLKNKDSKLFS 481
+LLT+Y+++ +T +L+ KW+ MI+DEGH +KN +++
Sbjct: 476 ------GILLTTYDIVRNNTKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAK 529
Query: 482 SLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK-------DINQE 534
SL + S HR++++GTP+QNNL EL+ L +F G G F++ ++ D N
Sbjct: 530 SLLEIPSSHRIIISGTPIQNNLKELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDKNAT 589
Query: 535 EQISRLHKMLA--------PHLLRRVKKDVMKE------LPPKKELILRVELSSKQKEYY 580
++ R+ +A P LRR+K +V + L K E+++ + L++ Q++ Y
Sbjct: 590 DREQRIGSTVAKNLREHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLY 649
Query: 581 KAILTRNYQLLTRRGGAQISLINVVMELRKLCCHPFM---------LEGVE--------- 622
+A L +L+ G+ ++ + + L+K+C HP + LEG++
Sbjct: 650 EAFLNSEI-VLSAFDGSPLAALTI---LKKICDHPLLLTKRAAEDVLEGMDSTLTQEEAG 705
Query: 623 ---------PDIDDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLE 673
D D +F + S KL + ++ L +GHRVLI++Q + ML+L++
Sbjct: 706 VAERLAMHIADNVDTDDFQTKNDSISCKLSFIMSLLENLIPEGHRVLIFSQTRKMLNLIQ 765
Query: 674 DYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 733
D + + + RIDG +R ++ F + + FLL+++ GGLG+ L AD VI+
Sbjct: 766 DSLTSNGYSFLRIDGTTKAPDRLKTVEEFQEGHVAPI-FLLTSQVGGLGLTLTKADRVIV 824
Query: 734 YDSDWNPHADLQAMARAHRLGQTNKV 759
D WNP D Q++ RA+R+GQT V
Sbjct: 825 VDPAWNPSTDNQSVDRAYRIGQTKDV 850
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 209 bits (532), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 126/322 (39%), Positives = 183/322 (56%), Gaps = 37/322 (11%)
Query: 312 FLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLY-KEGI-SPHL 369
FL +L YQ GL++L + K+ + ILADEMGLGKTI +IA LA L +GI PHL
Sbjct: 530 FLLKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHL 589
Query: 370 VVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIV 429
+V P S + NWE EF W P ++ Y GSA+ R + R+ G +
Sbjct: 590 IVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQ-----------------GWMK 632
Query: 430 SESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSR 489
S F V +T+Y ++ D+ K KW+ +I+DE H +KN S+ + +L ++S+
Sbjct: 633 LNS------FHVCITTYRLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSK 686
Query: 490 HRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-----------KDINQEEQIS 538
R+LLTGTPLQN+L EL+ LMHFL F S +EF++ F + IN+ E I
Sbjct: 687 RRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINK-EVID 745
Query: 539 RLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTRRGGAQ 598
RLH +L P LLRR+K+DV K+LP K E ++ LS +Q+ Y+ + T G+
Sbjct: 746 RLHNVLRPFLLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDFIASTETQATLTSGSF 805
Query: 599 ISLINVVMELRKLCCHPFMLEG 620
+I+++M+LRK+C HP + EG
Sbjct: 806 FGMISIIMQLRKVCNHPDLFEG 827
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
Query: 640 GKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRI 699
GKLQ L ++ KLK GHR LI+TQ MLD+LE + + + Y R+DG ERQ +
Sbjct: 1075 GKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLM 1134
Query: 700 DRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
RFN N F F+LSTR+GG+GINL ADTVI YDSDWNP D QA R HR+GQT +V
Sbjct: 1135 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1193
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 202 bits (515), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 161/516 (31%), Positives = 244/516 (47%), Gaps = 105/516 (20%)
Query: 318 LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYKE--------GISPHL 369
L YQ EG+N+L F + H IL D+MGLGKT+Q+ A +AS E + P +
Sbjct: 1482 LRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPSI 1541
Query: 370 VVAPLSTLRNWEREFATWA--PQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQ 427
+V P + + +W E + ++V+ YVGSAQ R +RE +F
Sbjct: 1542 IVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLRE-QFN--------------- 1585
Query: 428 IVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYS 487
+V++TSY+++ D L W I+DEGH +KN SK+ +++ Q
Sbjct: 1586 ----------NHNVIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLK 1635
Query: 488 SRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF--------------KDINQ 533
++HR++L+GTP+QNN+ EL+ L FL G G+ +FQ + KD
Sbjct: 1636 AQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEA 1695
Query: 534 EE-QISRLHKMLAPHLLRRVKKDVMKELPPK-----------KELILRVELS-SKQKEYY 580
+ LHK + P LLRR K++V+ +LP K +L L + S S K+
Sbjct: 1696 GVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEI 1755
Query: 581 KAILTRNYQLLTRRGGAQIS-------LINVVMELRKLCCHPFMLEG---VEPDIDD--- 627
+I+ + G A ++ + + L KLC HP ++ G EP D
Sbjct: 1756 SSIIKVDGS--ADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAA 1813
Query: 628 --------PKEFHKQLLESSGKLQLLDKMMVK-------------LKEQGHRVLIYTQFQ 666
E HK ++ S KL L +++ + L HRVLI+ Q +
Sbjct: 1814 MINGCSDIITELHK--VQHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHK 1871
Query: 667 HMLDLLED---YCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGI 723
+LD++E K Y R+DG V +R + FN+ + + LL+T GGLG+
Sbjct: 1872 ALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNS-DPTIDVLLLTTHVGGLGL 1930
Query: 724 NLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
NL +ADT++ + DWNP D QAM RAHRLGQ V
Sbjct: 1931 NLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVV 1966
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 202 bits (514), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 161/516 (31%), Positives = 244/516 (47%), Gaps = 105/516 (20%)
Query: 318 LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYKE--------GISPHL 369
L YQ EG+N+L F + H IL D+MGLGKT+Q+ A +AS E + P +
Sbjct: 1451 LRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPSI 1510
Query: 370 VVAPLSTLRNWEREFATWA--PQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQ 427
+V P + + +W E + ++V+ YVGSAQ R +RE +F
Sbjct: 1511 IVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLRE-QFN--------------- 1554
Query: 428 IVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYS 487
+V++TSY+++ D L W I+DEGH +KN SK+ +++ Q
Sbjct: 1555 ----------NHNVIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLK 1604
Query: 488 SRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF--------------KDINQ 533
++HR++L+GTP+QNN+ EL+ L FL G G+ +FQ + KD
Sbjct: 1605 AQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEA 1664
Query: 534 EE-QISRLHKMLAPHLLRRVKKDVMKELPPK-----------KELILRVELS-SKQKEYY 580
+ LHK + P LLRR K++V+ +LP K +L L + S S K+
Sbjct: 1665 GVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEI 1724
Query: 581 KAILTRNYQLLTRRGGAQIS-------LINVVMELRKLCCHPFMLEG---VEPDIDD--- 627
+I+ + G A ++ + + L KLC HP ++ G EP D
Sbjct: 1725 SSIIKVDGS--ADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAA 1782
Query: 628 --------PKEFHKQLLESSGKLQLLDKMMVK-------------LKEQGHRVLIYTQFQ 666
E HK ++ S KL L +++ + L HRVLI+ Q +
Sbjct: 1783 MINGCSDIITELHK--VQHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHK 1840
Query: 667 HMLDLLED---YCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGI 723
+LD++E K Y R+DG V +R + FN+ + + LL+T GGLG+
Sbjct: 1841 ALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNS-DPTIDVLLLTTHVGGLGL 1899
Query: 724 NLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
NL +ADT++ + DWNP D QAM RAHRLGQ V
Sbjct: 1900 NLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVV 1935
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 191/332 (57%), Gaps = 41/332 (12%)
Query: 309 SPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYKEGI--S 366
+PE G TL YQ++GL +L + + + ILADEMGLGKTIQ++AFLA L +E
Sbjct: 578 TPELFKG-TLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 636
Query: 367 PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSG 426
P LVVAP S L NW E + + P + + Y G Q RT++R+
Sbjct: 637 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKN----------------- 679
Query: 427 QIVSESKQDR--IKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLT 484
++ + R F +L+TSY+++ D + +KW+ M++DE +K+ S + +L
Sbjct: 680 --INPKRMYRRDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLL 737
Query: 485 QYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-KDIN---------QE 534
++ R+R+LLTGTP+QNN+ EL+ L+HF+ F + ++F E F K I E
Sbjct: 738 SFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNE 797
Query: 535 EQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAI---LTRNYQLL 591
Q++RLH +L P +LRRVKKDV+ EL K E+ + +LSS+Q+ +Y+AI ++
Sbjct: 798 HQLNRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFD 857
Query: 592 TRRG----GAQISLINVVMELRKLCCHPFMLE 619
+ RG ++L+N+V++LRK+C HP + E
Sbjct: 858 SNRGQFTDKKVLNLMNIVIQLRKVCNHPELFE 889
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 88/126 (69%), Gaps = 1/126 (0%)
Query: 634 QLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGA 693
+LL SGKLQ LD ++ +L+ HRVL++ Q ML++LEDY +Y+K+ Y R+DG
Sbjct: 1200 KLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIM 1259
Query: 694 ERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRL 753
+R+ + F + S F FLLSTRAGGLGINL ADTVI Y+SDWNP DLQAM RAHRL
Sbjct: 1260 DRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRL 1318
Query: 754 GQTNKV 759
GQT V
Sbjct: 1319 GQTKDV 1324
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 197 bits (501), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 193/346 (55%), Gaps = 36/346 (10%)
Query: 309 SPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYKEGI--S 366
+PE G TL YQ++GL +L + + + ILADEMGLGKTIQ++AFLA L +E
Sbjct: 578 TPELFKG-TLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 636
Query: 367 PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIRE-----YEFYFPXXXXXXX 421
P LVVAP S L NW E + + P + + Y G Q RT++R+ +F
Sbjct: 637 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRVMFFSTWIISFD 696
Query: 422 XXXSGQIVSESKQDRI-----------KFDVLLTSYEMINLDTTSLKPIKWESMIVDEGH 470
QI + + F +L+TSY+++ D + +KW+ M++DE
Sbjct: 697 PWAVRQICICKRACNVVRFQTLSDMDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQ 756
Query: 471 RLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-K 529
+K+ S + +L ++ R+R+LLTGTP+QNN+ EL+ L+HF+ F + ++F E F K
Sbjct: 757 AIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSK 816
Query: 530 DIN---------QEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY 580
I E Q++RLH +L P +LRRVKKDV+ EL K E+ + +LSS+Q+ +Y
Sbjct: 817 GIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFY 876
Query: 581 KAI---LTRNYQLLTRRG----GAQISLINVVMELRKLCCHPFMLE 619
+AI ++ + RG ++L+N+V++LRK+C HP + E
Sbjct: 877 QAIKNKISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELFE 922
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 88/126 (69%), Gaps = 1/126 (0%)
Query: 634 QLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGA 693
+LL SGKLQ LD ++ +L+ HRVL++ Q ML++LEDY +Y+K+ Y R+DG
Sbjct: 1233 KLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIM 1292
Query: 694 ERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRL 753
+R+ + F + S F FLLSTRAGGLGINL ADTVI Y+SDWNP DLQAM RAHRL
Sbjct: 1293 DRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRL 1351
Query: 754 GQTNKV 759
GQT V
Sbjct: 1352 GQTKDV 1357
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 228/498 (45%), Gaps = 79/498 (15%)
Query: 318 LHPYQLEGLNFLRFSWSKQTH-------VILADEMGLGKTIQSIAFLASLYKEG------ 364
L P+Q EG+ F+ F H ILAD+MGLGKT+QSI L +L +G
Sbjct: 180 LRPHQREGVQFM-FDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPM 238
Query: 365 ISPHLVVAPLSTLRNWEREFATW-APQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXX 423
+ ++V P S + NWE E W ++ ++ S + + F P
Sbjct: 239 VKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRP--------- 289
Query: 424 XSGQIVSESKQDRIKFDVLLTSYEMINLDTTSL-KPIKWESMIVDEGHRLKNKDSKLFSS 482
R VL+ SYE + ++ + + +I DE HRLKN + +
Sbjct: 290 ------------RSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRA 337
Query: 483 LTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQ----------------E 526
L + + RVLL+GTP+QN+L+E F +++F + G G F+ E
Sbjct: 338 LASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATE 397
Query: 527 EFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKA-ILT 585
E K++ ++ + L + +LRR + LPPK ++ ++++ Q Y I +
Sbjct: 398 EEKNL-AADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISS 456
Query: 586 RNYQLLTRRGGAQISLINVVMELRKLCCHPFML-EGVEPDIDDPKEFHKQL--------- 635
+N + Q ++ + L+KLC HP ++ + ++ F L
Sbjct: 457 KNLKRALADNAKQTKVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFS 516
Query: 636 -------------LESSGKLQLLDKMMVKLKEQ-GHRVLIYTQFQHMLDLLEDYCSYKKW 681
+E SGK+ +L +++ L+ + R+++ + + LDL C +++
Sbjct: 517 GRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRY 576
Query: 682 LYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPH 741
+ R+DG ++RQ ++R N F FLLS++AGG G+NL A+ ++++D DWNP
Sbjct: 577 PFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 636
Query: 742 ADLQAMARAHRLGQTNKV 759
D QA AR R GQ +V
Sbjct: 637 NDKQAAARVWRDGQKKRV 654
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 227/497 (45%), Gaps = 79/497 (15%)
Query: 318 LHPYQLEGLNFLRFSWSKQTH-------VILADEMGLGKTIQSIAFLASLYKEG------ 364
L P+Q EG+ F+ F H ILAD+MGLGKT+QSI L +L +G
Sbjct: 180 LRPHQREGVQFM-FDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPM 238
Query: 365 ISPHLVVAPLSTLRNWEREFATW-APQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXX 423
+ ++V P S + NWE E W ++ ++ S + + F P
Sbjct: 239 VKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRP--------- 289
Query: 424 XSGQIVSESKQDRIKFDVLLTSYEMINLDTTSL-KPIKWESMIVDEGHRLKNKDSKLFSS 482
R VL+ SYE + ++ + + +I DE HRLKN + +
Sbjct: 290 ------------RSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRA 337
Query: 483 LTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQ----------------E 526
L + + RVLL+GTP+QN+L+E F +++F + G G F+ E
Sbjct: 338 LASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATE 397
Query: 527 EFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTR 586
E K++ ++ + L + +LRR + LPPK ++ ++++ Q Y + +
Sbjct: 398 EEKNL-AADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQTTYNGCLCMQ 456
Query: 587 NYQLLTRRGGAQISLINVVMELRKLCCHPFML-EGVEPDIDDPKEFHKQL---------- 635
+ L Q ++ + L+KLC HP ++ + ++ F L
Sbjct: 457 LKRALAD-NAKQTKVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSG 515
Query: 636 ------------LESSGKLQLLDKMMVKLKEQGH-RVLIYTQFQHMLDLLEDYCSYKKWL 682
+E SGK+ +L +++ L+ + R+++ + + LDL C +++
Sbjct: 516 RSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYP 575
Query: 683 YERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 742
+ R+DG ++RQ ++R N F FLLS++AGG G+NL A+ ++++D DWNP
Sbjct: 576 FLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPAN 635
Query: 743 DLQAMARAHRLGQTNKV 759
D QA AR R GQ +V
Sbjct: 636 DKQAAARVWRDGQKKRV 652
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18
| chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 203/473 (42%), Gaps = 66/473 (13%)
Query: 306 YENSPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYKEGI 365
YE P + L P+Q EG+ F+ V+LADEMGLGKT+Q+IA + +
Sbjct: 161 YEKIPSHIEPKLL-PFQREGIEFI---LQHGGRVLLADEMGLGKTLQAIAVTTCVQESW- 215
Query: 366 SPHLVVAPLSTLRNWEREFATW--APQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXX 423
P L++AP S +W W P ++V+ +
Sbjct: 216 -PVLIIAPSSLRLHWATMIHQWLHVPPSDIVVVLPQPGGSN------------------K 256
Query: 424 XSGQIVSESKQDRIKFDVL--LTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFS 481
IVS + + I D + + SY+++ L + ++ +I DE H LKN +K S
Sbjct: 257 CGFTIVSSNTKGTIHLDGVFNIVSYDVVTKLDKLLMALDFKVVIADESHFLKNGQAKRTS 316
Query: 482 SLTQY--SSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEE------FKDINQ 533
+ +++ +LL+GTP + ELF + L + ++ E+ F
Sbjct: 317 ACLPVIKKAQYAILLSGTPALSRPIELFKQLEALYPDVYRNIHEYGGRYCKGGFFGTYQG 376
Query: 534 EEQISRLHKML-APHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLT 592
LH ++ A ++RR+KKDV+ ELP K+ + ++L++K + A+
Sbjct: 377 ASNHDELHNLMKATVMIRRLKKDVLTELPSKRRQQVFLDLAAKDMKQINALFHE------ 430
Query: 593 RRGGAQISLINVVMELRKLCCHPFMLEGVEPDIDDPKEFHKQLL------ESSGKLQLLD 646
+ VV K C E DI K K L+ + K+ +
Sbjct: 431 ---------LKVVKSKIKDCIS-------EDDIKSLKFIEKNLINKIYTDSAVAKIPAVL 474
Query: 647 KMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKN 706
+ + E G + L++ Q ML+ L + KK RIDG + RQ + F K+
Sbjct: 475 DYLENVIEAGCKFLVFAHHQSMLEELHQFLKKKKVGCIRIDGSTPASSRQALVSDFQDKD 534
Query: 707 SSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
+ +LS RA G+GI L A TVI + W P +QA RAHR+GQ + V
Sbjct: 535 EIKAA-VLSIRAAGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSV 586
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 142/293 (48%), Gaps = 56/293 (19%)
Query: 321 YQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLY-KEGIS-----------PH 368
+Q EG+ F+ + IL D+MGLGKTIQ+IAFLA++Y K+G + P
Sbjct: 142 HQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCLLESDKGPV 201
Query: 369 LVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQI 428
L++ P S + NWE EF+ WA V +Y GS R +I E
Sbjct: 202 LIICPSSIIHNWESEFSRWASFFKVSVYHGSN--RDMILE-------------------- 239
Query: 429 VSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSS 488
K +VL+TS++ + L I WE +I DE HRLKN+ SKL+ + + +
Sbjct: 240 ----KLKARGVEVLVTSFDTFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKT 295
Query: 489 RHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQ----------------EEFKDIN 532
+ R+ LTGT +QN + ELF L ++ G G+ E F+ E F I
Sbjct: 296 KKRIGLTGTVMQNKISELFNLFEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIA 355
Query: 533 QEEQISRLHKMLAPHLLRRVKKDVMKELPPKKE-LILRVELSSKQKEYYKAIL 584
+ + L +L ++LRR K++ + L KE ++ ++S Q+ Y+ ++
Sbjct: 356 DKRK-QHLGSLLRKYMLRRTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMI 407
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
Query: 640 GKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRI 699
GK++ L+K+M +G ++L+++ MLD+LE + K + + R+DG RQ +
Sbjct: 528 GKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQSLV 587
Query: 700 DRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
D FNA + S+ FL+ST+AGGLG+NL +A+ V+I+D +WNP DLQA R+ R GQ V
Sbjct: 588 DDFNA-SPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHV 646
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 211/488 (43%), Gaps = 57/488 (11%)
Query: 317 TLHPYQLEGLNFLRFSWSKQTHV--------------ILADEMGLGKTIQSIAFLASLYK 362
TL+P+Q EG F+ + + T + I++ + G GKT ++ FL S K
Sbjct: 576 TLYPHQQEGFEFIWKNLAGTTKINELNSVGVKGSGGCIISHKAGTGKTRLTVVFLQSYLK 635
Query: 363 EGISPH-LVVAPLSTLRNWEREFATWAPQ-----MNVVMYVGSAQARTVIREYEFYFPXX 416
+ H +V+AP + +R WE E W MN + G A V R
Sbjct: 636 RFPNSHPMVIAPATLMRTWEDEVRKWNVNIPFYNMNSLQLSGYEDAEAVSR------LEG 689
Query: 417 XXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMI--NLDTTSLKPIKW------ESMIVDE 468
++VS KQ I + YE + N +T ++ + +++DE
Sbjct: 690 NRHHNSIRMVKLVSWWKQKSI-LGISYPLYEKLAANKNTEGMQVFRRMLVELPGLLVLDE 748
Query: 469 GHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDEL---FMLMHFLDAGKFGS-LEEF 524
GH +N+ S ++ LT+ + R+ L+GT QNN EL L D S + E
Sbjct: 749 GHTPRNQSSLIWKVLTEVRTEKRIFLSGTLFQNNFKELSNVLCLARPADKDTISSRIHEL 808
Query: 525 QE-----EFKDINQEEQISRLHKMLAPHLLRRVKKDVMKE-LPPKKELILRVELSSKQKE 578
+ E +N+E +I L M+A H + + +++E LP ++ ++ + +QK+
Sbjct: 809 SKCSQEGEHGRVNEENRIVDLKAMIA-HFVHVHEGTILQESLPGLRDCVVVLNPPFQQKK 867
Query: 579 YYKAILTRNYQLLTRRGGAQISLINVVMELRKLCCHPFMLEG--VEPDIDDPKEFHKQLL 636
I T ++S ++V L LCC+P E + P + +
Sbjct: 868 ILDRIDTSQNTFEFEH---KLSAVSVHPSLY-LCCNPTKKEDLVIGPATLGTLKRLRLKY 923
Query: 637 ESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDL-LEDYCSYKKWLY-ERI---DGKVG 691
E K + L + +VL+Y+Q+ L L +E + W E+I GKV
Sbjct: 924 EEGVKTKFLIDFIRISGTVKEKVLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVE 983
Query: 692 GAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAH 751
+RQ ID FN +S L ST+A GI+L A V+I D WNP + QA++RA
Sbjct: 984 QRDRQHMIDNFNKPDSGSKVLLASTKACSEGISLVGASRVVILDVVWNPSVESQAISRAF 1043
Query: 752 RLGQTNKV 759
R+GQ V
Sbjct: 1044 RIGQKRAV 1051
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 125/506 (24%), Positives = 212/506 (41%), Gaps = 91/506 (17%)
Query: 318 LHPYQLEGLNFL--RFSWSKQTHVILADEMGLGKTIQSIAFLASLYKEGISPH---LVVA 372
+ P+Q EG FL + + ILA G GKT I+FL S + P LVV
Sbjct: 265 MRPHQTEGFRFLCNNLAADEPGGCILAHAPGSGKTFLLISFLQSFM--AMDPQARPLVVL 322
Query: 373 PLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSES 432
P + +W+REF W + ++ S +A + ++ + Q +
Sbjct: 323 PKGIIESWKREFTLWEVEKIPLLDFYSVKAESRKQQLKVLGQWIKERSILFLGYQQFTRI 382
Query: 433 KQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRV 492
D F+ ++I L+ +L +I+DEGH +NK++ + SSL + +R +V
Sbjct: 383 ICDD-NFEAASEDCKLILLEKPTL-------LILDEGHTSRNKETYMLSSLARVKTRRKV 434
Query: 493 LLTGTPLQNNLDELFMLMHF------------------------------------LDAG 516
+LTGT QNN++E+F ++ ++
Sbjct: 435 VLTGTLFQNNVEEVFNILDLVRPKFLKRPGTREIVSRIMSKAEIPRGKQVNQSSSSIEGT 494
Query: 517 KFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQ 576
F ++E + + + + + + + + ++L K D LP E + + LSS Q
Sbjct: 495 FFAAVELTLQRSTNFSAKASLIKDLREMTRNILHYHKADFSGLLPGLSEFTVMLNLSSIQ 554
Query: 577 KEYYKAILTRNYQLLTRRGGAQISLINVVMELRKLCCHPFMLEGVEPDIDDPKEFHKQLL 636
++ K + R +L QISL L HP + +E ++P K
Sbjct: 555 RDEVKGL--RKMELF-----KQISLGAA------LYIHPKLKSFLE---ENPSNGEKGFS 598
Query: 637 ESSGKLQLLDKMM--------VKLK----------EQGHRVLIYTQFQHMLDLLED-YCS 677
+++ + LDKM+ VK+K G ++L+++Q+ + LE S
Sbjct: 599 DNNTTVMKLDKMLKKINVRDGVKMKFFLNLLALCESTGEKLLVFSQYIVPIKTLERLMSS 658
Query: 678 YKKWLYER----IDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 733
K W + I G +R+ ++RFN ++ F S +A G GI+L A V+I
Sbjct: 659 MKGWRLGKEMFTITGDSSNEQREWSMERFNNSLEAK-VFFGSIKACGEGISLVGASRVLI 717
Query: 734 YDSDWNPHADLQAMARAHRLGQTNKV 759
D NP QA+ARA+R GQ KV
Sbjct: 718 LDVHLNPSVTQQAVARAYRPGQKRKV 743
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 160/375 (42%), Gaps = 89/375 (23%)
Query: 340 ILADEMGLGKTIQSIAFL-----------------------ASLYKEGISP--------- 367
ILAD MGLGKT+ +I+ L +S + SP
Sbjct: 416 ILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFLG 475
Query: 368 ----------------HLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEF 411
+L+V P++ L W+ E A ++ +YV Q+R
Sbjct: 476 FDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRP------- 528
Query: 412 YFPXXXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMIN-LDTTSLKPIKWESMIVDEGH 470
+++S+S + VL + + N D + ++W +++DE H
Sbjct: 529 ------------KDAKLLSQSDVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAH 576
Query: 471 RLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEF----QE 526
+KN S++ + + R LTGTP+QNNL++L+ L+ FL +G+ + Q+
Sbjct: 577 TIKNSKSQISLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQK 636
Query: 527 EFKDINQEEQISRLHKMLAPHLLRRVKKDVMKE------LPPKKELILRVELSSKQKEYY 580
F++ E + + +L P +LRR K +E LPP ++ ELS ++++Y
Sbjct: 637 PFEE-GDERGLKLVQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFY 695
Query: 581 KAILTRN---YQLLTRRGGA---QISLINVVMELRKLCCHPFML--EGVEPDIDDPKEFH 632
A+ R+ + +G S++ +++ LR+ C HPF++ G + D +
Sbjct: 696 DALFKRSKVKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLS 755
Query: 633 KQLLESSGKLQLLDK 647
K+ L SGK L++
Sbjct: 756 KRFL--SGKSSGLER 768
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Query: 630 EFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGK 689
+ K +ESS LL+++ L+ G + ++++Q+ LDLL+ S + + R+DG
Sbjct: 854 DVEKNWVESSKITALLEELE-GLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGT 912
Query: 690 VGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMAR 749
+ +R+ + F +++ S L+S +AGG+GINL A + D WNP + QA+ R
Sbjct: 913 LSQQQREKVLKEF-SEDGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMR 971
Query: 750 AHRLGQTNKV 759
HR+GQT +V
Sbjct: 972 IHRIGQTKEV 981
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 75/136 (55%), Gaps = 17/136 (12%)
Query: 639 SGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSY--------------KKWLYE 684
SGK+ LL ++ + G + L+++Q LDL+E Y S K W
Sbjct: 1093 SGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWY-- 1150
Query: 685 RIDGKVGGAERQIRIDRFNAKNSSRF-CFLLSTRAGGLGINLATADTVIIYDSDWNPHAD 743
RIDGK +ERQ +DRFN ++ R C L+STRAG LGINL A+ VII D WNP D
Sbjct: 1151 RIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYD 1210
Query: 744 LQAMARAHRLGQTNKV 759
LQA+ RA R GQ V
Sbjct: 1211 LQAIFRAWRYGQKKPV 1226
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 120/277 (43%), Gaps = 57/277 (20%)
Query: 332 SWSKQTHVILADEMGLGKTIQSIAFLASLYK---EGISPHLVVAPLSTLRNWEREFATWA 388
S K ILA MGLGKT Q IAFL + + G+ L+V P++ L NW EF W
Sbjct: 743 SGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWM 802
Query: 389 PQ----MNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESKQDRIKFDVLLT 444
P + + M +G + Y+F++ + + + + +D D+L
Sbjct: 803 PSEVKPLRIFM-LGD------VSRYKFFYERNFWGVKDLNAARGICNALRD--GPDIL-- 851
Query: 445 SYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLD 504
+ DE H +KN + +L Q + R+ LTG+PLQNNL
Sbjct: 852 --------------------VCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLM 891
Query: 505 ELFMLMHFLDAGKFGSLEEFQEEFKD-----------------INQEEQISRLHKMLAPH 547
E + ++ F+ G GS EF+ F++ +NQ I L++ L
Sbjct: 892 EYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHI--LYEQLKGF 949
Query: 548 LLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAIL 584
+ R V K+LPPK ++ V+LS Q+ Y+ L
Sbjct: 950 VQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFL 986
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 75/136 (55%), Gaps = 17/136 (12%)
Query: 639 SGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSY--------------KKWLYE 684
SGK+ LL ++ + G + L+++Q LDL+E Y S K W
Sbjct: 1114 SGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWY-- 1171
Query: 685 RIDGKVGGAERQIRIDRFNAKNSSRF-CFLLSTRAGGLGINLATADTVIIYDSDWNPHAD 743
RIDGK +ERQ +DRFN ++ R C L+STRAG LGINL A+ VII D WNP D
Sbjct: 1172 RIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYD 1231
Query: 744 LQAMARAHRLGQTNKV 759
LQA+ RA R GQ V
Sbjct: 1232 LQAIFRAWRYGQKKPV 1247
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 120/282 (42%), Gaps = 46/282 (16%)
Query: 332 SWSKQTHVILADEMGLGKTIQSIAFLASLYK---EGISPHLVVAPLSTLRNWEREFATWA 388
S K ILA MGLGKT Q IAFL + + G+ L+V P++ L NW EF W
Sbjct: 743 SGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWM 802
Query: 389 PQ----MNVVMYVGSAQAR-----TVIREYEFYFPXXXXXXXXXXSGQIVSESKQDRIKF 439
P + + M ++ R T R+ F G+ V + R
Sbjct: 803 PSEVKPLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGIC 862
Query: 440 DVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPL 499
+ L ++ ++ DE H +KN + +L Q + R+ LTG+PL
Sbjct: 863 NALRDGPDI---------------LVCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPL 907
Query: 500 QNNLDELFMLMHFLDAGKFGSLEEFQEEFKD-----------------INQEEQISRLHK 542
QNNL E + ++ F+ G GS EF+ F++ +NQ I L++
Sbjct: 908 QNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHI--LYE 965
Query: 543 MLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAIL 584
L + R V K+LPPK ++ V+LS Q+ Y+ L
Sbjct: 966 QLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFL 1007
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 75/136 (55%), Gaps = 17/136 (12%)
Query: 639 SGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSY--------------KKWLYE 684
SGK+ LL ++ + G + L+++Q LDL+E Y S K W
Sbjct: 1114 SGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWY-- 1171
Query: 685 RIDGKVGGAERQIRIDRFNAKNSSRF-CFLLSTRAGGLGINLATADTVIIYDSDWNPHAD 743
RIDGK +ERQ +DRFN ++ R C L+STRAG LGINL A+ VII D WNP D
Sbjct: 1172 RIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYD 1231
Query: 744 LQAMARAHRLGQTNKV 759
LQA+ RA R GQ V
Sbjct: 1232 LQAIFRAWRYGQKKPV 1247
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 120/282 (42%), Gaps = 46/282 (16%)
Query: 332 SWSKQTHVILADEMGLGKTIQSIAFLASLYK---EGISPHLVVAPLSTLRNWEREFATWA 388
S K ILA MGLGKT Q IAFL + + G+ L+V P++ L NW EF W
Sbjct: 743 SGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWM 802
Query: 389 PQ----MNVVMYVGSAQAR-----TVIREYEFYFPXXXXXXXXXXSGQIVSESKQDRIKF 439
P + + M ++ R T R+ F G+ V + R
Sbjct: 803 PSEVKPLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGIC 862
Query: 440 DVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPL 499
+ L ++ ++ DE H +KN + +L Q + R+ LTG+PL
Sbjct: 863 NALRDGPDI---------------LVCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPL 907
Query: 500 QNNLDELFMLMHFLDAGKFGSLEEFQEEFKD-----------------INQEEQISRLHK 542
QNNL E + ++ F+ G GS EF+ F++ +NQ I L++
Sbjct: 908 QNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHI--LYE 965
Query: 543 MLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAIL 584
L + R V K+LPPK ++ V+LS Q+ Y+ L
Sbjct: 966 QLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFL 1007
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 75/136 (55%), Gaps = 17/136 (12%)
Query: 639 SGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSY--------------KKWLYE 684
SGK+ LL ++ + G + L+++Q LDL+E Y S K W
Sbjct: 1114 SGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWY-- 1171
Query: 685 RIDGKVGGAERQIRIDRFNAKNSSRF-CFLLSTRAGGLGINLATADTVIIYDSDWNPHAD 743
RIDGK +ERQ +DRFN ++ R C L+STRAG LGINL A+ VII D WNP D
Sbjct: 1172 RIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYD 1231
Query: 744 LQAMARAHRLGQTNKV 759
LQA+ RA R GQ V
Sbjct: 1232 LQAIFRAWRYGQKKPV 1247
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 120/282 (42%), Gaps = 46/282 (16%)
Query: 332 SWSKQTHVILADEMGLGKTIQSIAFLASLYK---EGISPHLVVAPLSTLRNWEREFATWA 388
S K ILA MGLGKT Q IAFL + + G+ L+V P++ L NW EF W
Sbjct: 743 SGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWM 802
Query: 389 PQ----MNVVMYVGSAQAR-----TVIREYEFYFPXXXXXXXXXXSGQIVSESKQDRIKF 439
P + + M ++ R T R+ F G+ V + R
Sbjct: 803 PSEVKPLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGIC 862
Query: 440 DVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPL 499
+ L ++ ++ DE H +KN + +L Q + R+ LTG+PL
Sbjct: 863 NALRDGPDI---------------LVCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPL 907
Query: 500 QNNLDELFMLMHFLDAGKFGSLEEFQEEFKD-----------------INQEEQISRLHK 542
QNNL E + ++ F+ G GS EF+ F++ +NQ I L++
Sbjct: 908 QNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHI--LYE 965
Query: 543 MLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAIL 584
L + R V K+LPPK ++ V+LS Q+ Y+ L
Sbjct: 966 QLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFL 1007
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 117/504 (23%), Positives = 199/504 (39%), Gaps = 92/504 (18%)
Query: 315 GGTLHPYQLEGLNFL--RFSWSKQTHVILADEMGLGKTIQSIAFLAS-LYKEGISPHLVV 371
+ P+Q+EG FL I+A G GKT I+F+ S L K + LVV
Sbjct: 347 AAEMKPHQIEGFQFLCSNLVADDPGGCIMAHAPGSGKTFMIISFMQSFLAKYPQAKPLVV 406
Query: 372 APLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSE 431
P L W++EF W + ++ SA+A Q +S
Sbjct: 407 LPKGILPTWKKEFVRWQVEDIPLLDFYSAKAEN--------------------RAQQLSI 446
Query: 432 SKQDRIKFDVLLTSYEMINL-------DTTSLKPIKWES---MIVDEGHRLKNKDSKLFS 481
KQ K +L Y+ + D+ S + I + +I+DEGH +N+D+ L
Sbjct: 447 LKQWMEKKSILFLGYQQFSTIVCDDTTDSLSCQEILLKVPSILILDEGHTPRNEDTNLLQ 506
Query: 482 SLTQYSSRHRVLLTGTPLQNNLDELFMLMHF-------LDAGKFG--------------- 519
SL Q + +V+L+GT QN++ E+F +++ LD K
Sbjct: 507 SLAQVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLDTSKSAVKRILAYTPCDVRGR 566
Query: 520 --------------SLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKE 565
++E ++ +D + ++ + + + +L K D + ELP +
Sbjct: 567 LTGSNSDMASMFNETVEHTLQKSEDFTVKIKVIQDLREMTKKVLHYYKGDFLDELPGLAD 626
Query: 566 LILRVELSSKQKEYYKAILTRNYQLLTRRGGAQISLINVVMELRKLCCHPFM--LEGVEP 623
+ + LS KQ K + + G+ I L HP +
Sbjct: 627 FTVVLNLSPKQLNEVKKLRREKRKFKVSAVGSAIYL------------HPKLKVFSDKSD 674
Query: 624 DIDDPK--EFHKQL-LESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKK 680
D+ D E ++L L K + ++ G ++L+++Q+ L LE + K
Sbjct: 675 DVSDTTMDEMVEKLDLNEGVKAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLERLAALAK 734
Query: 681 -WLYER----IDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYD 735
W + + G +R+ ++ FN+ ++ F S +A G GI+L A ++I D
Sbjct: 735 GWKLGKEVFVLTGNTSSEQREWSMETFNSSPDAKI-FFGSIKACGEGISLVGASRILILD 793
Query: 736 SDWNPHADLQAMARAHRLGQTNKV 759
NP QA+ RA R GQ V
Sbjct: 794 VPLNPSVTRQAIGRAFRPGQKKMV 817
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 147/330 (44%), Gaps = 56/330 (16%)
Query: 464 MIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEE 523
+++DE H +N+ S ++ +L++ ++ R+LL+GTP QNN EL + L + LE
Sbjct: 1008 LVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNFLEL---CNVLGLARPKYLER 1064
Query: 524 FQEEFK----------------DINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELI 567
K +IN I L ++ P + + LP +E +
Sbjct: 1065 LTSTLKKSGMTVTKRGKKNLGNEINNR-GIEELKAVMLPFVHVHKGSILQSSLPGLRECV 1123
Query: 568 LRVELSSKQKEYYKAI-LTRNYQLLTR-RGGAQISLINVVMELRKLCCHPFMLEGVEPDI 625
+ + Q+ ++I +T N + ++SL++V HP ++ +
Sbjct: 1124 VVLNPPELQRRVLESIEVTHNRKTKNVFETEHKLSLVSV---------HPSLVSRCKISE 1174
Query: 626 DDPKEFHKQLLESSGKLQLLDKMMVK-------------LKEQGHRVLIYTQFQHMLDLL 672
+ + LL K++L VK +KE +VL+++Q+ L L+
Sbjct: 1175 KERLSIDEALLAQLKKVRLDPNQSVKTRFLMEFVELCEVIKE---KVLVFSQYIDPLKLI 1231
Query: 673 EDY-CSYKKW------LYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINL 725
+ S KW LY + GK+ +RQ I+ FN S FL ST+A GI+L
Sbjct: 1232 MKHLVSRFKWNPGEEVLY--MHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISL 1289
Query: 726 ATADTVIIYDSDWNPHADLQAMARAHRLGQ 755
A VI+ D WNP + QA++RA+R+GQ
Sbjct: 1290 VGASRVILLDVVWNPAVERQAISRAYRIGQ 1319
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 142/333 (42%), Gaps = 82/333 (24%)
Query: 340 ILADEMGLGKTIQSIAFLASLYKEGISPH------------------------------- 368
ILAD MGLGKT+ +IA + + G +P
Sbjct: 684 ILADAMGLGKTVMTIALILARPGRG-NPENEDVLVADVNADKRNRKEIHMALTTVKAKGG 742
Query: 369 -LVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQ 427
L++ P++ L W+ E T + V + V RT +
Sbjct: 743 TLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRT------------------HDAKA 784
Query: 428 IVSESKQDRIKFDVLLTSYEMI------NLDTTSLKPIKWESMIVDEGHRLKNKDSKLFS 481
I S DV+LT+Y ++ ++ + I W +++DE H +K+ ++
Sbjct: 785 IASH--------DVVLTTYGVLTSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAK 836
Query: 482 SLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSL----EEFQEEFKDINQEEQI 537
+ + SS R LTGTPLQN L++L+ L+ FL + + + Q+ +++ +
Sbjct: 837 ATFELSSHCRWCLTGTPLQNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYEN-GDPRGL 895
Query: 538 SRLHKMLAPHLLRRVKK------DVMKELPPKKELILRVELSSKQKEYYKAILTRN---Y 588
+ +L P +LRR K+ ++ ELPP ++ E S ++++Y A+ R+ +
Sbjct: 896 KLIKAILRPLMLRRTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQF 955
Query: 589 QLLTRRGGA---QISLINVVMELRKLCCHPFML 618
+G +++ +++ LR+ C HPF++
Sbjct: 956 DQFVAQGKVLHNYANILELLLRLRQCCNHPFLV 988
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 639 SGKLQLLDKMMVKLKEQG--HRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQ 696
S K+ L K + K+K+ G + ++++Q+ LDLLE + + + R DGK+ R+
Sbjct: 1108 SSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGRE 1167
Query: 697 IRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQT 756
+ FN + + L+S +AGG+G+NL A +V + D WNP + QA+ R HR+GQ
Sbjct: 1168 KVLKEFN-ETKQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQK 1226
Query: 757 NKV 759
V
Sbjct: 1227 RTV 1229
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 140/323 (43%), Gaps = 42/323 (13%)
Query: 321 YQLEGLNFLRFSWSKQTHV---ILADEMGLGKTIQSIAF-----LASLYKE------GIS 366
+Q LN++R + H ILAD+ GLGKTI +I+ L S K+
Sbjct: 56 HQKIALNWMRKKEKRSRHCLGGILADDQGLGKTISTISLILLQKLKSQSKQRKRKGQNSG 115
Query: 367 PHLVVAPLSTLRNWEREFATWAP---QMNVVMYVGSAQAR--TVIREYEFYFPXXXXXXX 421
L+V P S ++ W RE +++V+++ GS + + T I Y+
Sbjct: 116 GTLIVCPASVVKQWAREVKEKVSDEHKLSVLVHHGSHRTKDPTEIAIYDVVMTTYAIVTN 175
Query: 422 XXXSGQIVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFS 481
+++ + D ++ L +I +L ++W +++DE H +KN + +
Sbjct: 176 EVPQNPMLN--RYDSMRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNHRTLIAK 233
Query: 482 SLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---DINQEEQIS 538
+ ++ R LTGTP++N +D+L+ FL + F + K D
Sbjct: 234 ACFSLRAKRRWCLTGTPIKNKVDDLYSYFRFLRYHPYAMCNSFHQRIKAPIDKKPLHGYK 293
Query: 539 RLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQK-EYYKAILTRNYQLLTRRGGA 597
+L +L +LRR K + ++EL+S+ K E Y A T + +
Sbjct: 294 KLQAILRGIMLRRTK---------EWSFYRKLELNSRWKFEEYAADGTLHEHM------- 337
Query: 598 QISLINVVMELRKLCCHPFMLEG 620
L+ +++ LR+ C HP ++ G
Sbjct: 338 -AYLLVMLLRLRQACNHPQLVNG 359
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 687 DGKVGGAERQIR--IDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADL 744
D V RQ R ++ N+ + L+S +AG LG+N+ A VI+ D WNP +
Sbjct: 483 DSSVACRARQSRHSTNKDNSISGLVCAMLMSLKAGNLGLNMVAASHVILLDLWWNPTTED 542
Query: 745 QAMARAHRLGQTNKV 759
QA+ RAHR+GQT V
Sbjct: 543 QAIDRAHRIGQTRAV 557
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 31/184 (16%)
Query: 340 ILADEMGLGKTIQSIAFLASL-------YKEGISPHLVVAPLSTLRNWEREFA--TWAPQ 390
ILADEMG+GKTIQ+I+ + + +E + LV+ P L W E + T
Sbjct: 157 ILADEMGMGKTIQAISLVLARREVDRAKSREAVGHTLVLVPPVALSQWLDEISRLTSPGS 216
Query: 391 MNVVMYVGSAQARTV--IREYEFYFPXXXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEM 448
V+ Y G + + V + Y+F S + +E ++D E
Sbjct: 217 TRVLQYHGPKRDKNVQKLMNYDFVL---------TTSPIVENEYRKD-----------EG 256
Query: 449 INLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFM 508
++ + L IKW +IVDE H +KN+ S+ ++ + +R L+GTPLQN++DEL+
Sbjct: 257 VDETMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEATYRWALSGTPLQNDVDELYS 316
Query: 509 LMHF 512
L+ +
Sbjct: 317 LVSY 320
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 658 RVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTR 717
+ ++++QF LDL+ ++ G + A + + F + R L+S +
Sbjct: 527 KAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKEEPDCR-VLLMSLQ 585
Query: 718 AGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
AGG+ +NL A V + D WNP + QA R HR+GQ V
Sbjct: 586 AGGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPV 627
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 137/344 (39%), Gaps = 96/344 (27%)
Query: 340 ILADEMGLGKTIQSIAF----------------------------------------LAS 359
ILAD+ GLGKT+ +IA L
Sbjct: 567 ILADDQGLGKTVSTIALILTERSTPYLPCEEDSKNGGCNQSDHSQVVFNENKVVEDSLCK 626
Query: 360 LYKEGISPHLVVAPLSTLRNWEREF---ATWAPQMNVVMYVGSAQARTVIREYEFYFPXX 416
+ + L+V P S +R W E T ++V++Y G ++ +
Sbjct: 627 MRGRPAAGTLIVCPTSLMRQWADELRKKVTLEAHLSVLVYHGCSRTK------------- 673
Query: 417 XXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMIN----LD-------TTSLKPIKWESMI 465
+ K+DV++T+Y +++ +D + L + W ++
Sbjct: 674 ---------------DPHELAKYDVVITTYSLVSKRKHMDCEPVEFLSGPLAQVSWFRVV 718
Query: 466 VDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQ 525
+DE +KN ++ + + ++ R L+GTP+QN++ +L+ FL + S + F
Sbjct: 719 LDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLKYDPYSSYQTFC 778
Query: 526 EEFKDINQE---EQISRLHKMLAPHLLRRVKKDVMK-----ELPPKKELILRVELSSKQK 577
E K+ E L +L +LRR K ++ LPPK + RV+ + +++
Sbjct: 779 ETIKNPISSYPGEGYKTLQAILKKVMLRRTKDTLLDGKPVISLPPKSIELRRVDFTKEER 838
Query: 578 EYYKAILTRN---YQLLTRRGGAQISLINV---VMELRKLCCHP 615
++Y + + ++ G + + +N+ ++ LR+ C HP
Sbjct: 839 DFYSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQACGHP 882
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 656 GHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLS 715
G + +++TQ+ MLDLLE Y R DGK+ R + FN ++S
Sbjct: 1071 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSV-MIMS 1129
Query: 716 TRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
+A LG+N+ A VI+ D WNP + QA+ RAHR+GQT V
Sbjct: 1130 LKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPV 1173
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 115/235 (48%), Gaps = 44/235 (18%)
Query: 437 IKFDVLLTSYEMINLDTT----SLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRV 492
+K+D++LT+Y + ++ + +K ++W +I+DE H +KN +++ + + + R
Sbjct: 384 MKYDIVLTTYGTLAVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRW 443
Query: 493 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF--KDINQ--EEQISRLHKMLAPHL 548
+TGTP+QN +L+ LM FL F S++ + + + + Q ++ +SRL ++A
Sbjct: 444 AVTGTPIQNGSFDLYSLMAFLRFEPF-SIKSYWQSLIQRPLGQGNKKGLSRLQVLMATIS 502
Query: 549 LRRVKKDVMKELPPKKELILRVELSSKQKEYY----------------KAILTRNYQLLT 592
LRR K+ + LPPK VELS ++++ Y L RNY
Sbjct: 503 LRRTKEKSLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYS--- 559
Query: 593 RRGGAQISLINVVMELRKLC-----CHP----FMLEGVEPDIDDPKEFHKQLLES 638
+++++++ LR+LC C P F D+ D E ++L+ +
Sbjct: 560 -------TVLSIILRLRQLCDDMSLCPPELRSFTTSTSVEDVTDKPELLQKLVAA 607
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 644 LLDKMMVKLKEQGH-RVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRF 702
LL +M +E + + ++++QF+ ML LLE + R+DG + +R I F
Sbjct: 693 LLSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEF 752
Query: 703 -NAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
N + + L S +A G GINL A V ++D WNP + QAM R HR+GQ +V
Sbjct: 753 GNPELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEV 810
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 132/312 (42%), Gaps = 60/312 (19%)
Query: 299 QQKEFQQYENSPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLA 358
++K Q E P L L P+QL+GL RF + +ADEMGLGKT+Q+IA
Sbjct: 186 EEKVEQLIETLPRKLVNALL-PFQLDGL---RFGLRRGGRCFIADEMGLGKTLQAIAIAG 241
Query: 359 SLYKEGISPHLVVAPLSTLRNWEREFATWAPQM---NVVMYVGSAQARTVIREYEFYFPX 415
EG LVV P W E W P +V + G ++ Y P
Sbjct: 242 CFISEG--SILVVCPAVLRFTWAEELERWLPSCLPSDVHLVFGH-------QDNPAYLPR 292
Query: 416 XXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRL--- 472
V++ SY+M+ T++ +W +IVDE H L
Sbjct: 293 WPK----------------------VVVISYKMLQHLRTTMLEREWALLIVDESHHLRCS 330
Query: 473 -KNKDSKLFSSLTQYSS--RHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLE-EFQEE- 527
K D ++ + +H +LL+GTP + ++F ++ L G G + EF +
Sbjct: 331 KKKSDPPEIKTVLDVAEKVKHIILLSGTPSVSRPFDIFHQINMLWPGLLGKDKYEFAKTY 390
Query: 528 -------------FKDINQEEQISRLHKMLAPH-LLRRVKKDVMKELPPKKELILRVELS 573
F+D ++ ++ L+ +L ++RR+K+ ++ +LPPK+ I+ + L
Sbjct: 391 CEVGLVRGIQGKIFQDFSKGTRLLELNILLNQTVMIRRLKQHLLTQLPPKRRQIVTILLK 450
Query: 574 SKQKEYYKAILT 585
AI++
Sbjct: 451 KSDIALAMAIVS 462
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 658 RVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTR 717
+++++ +LD ++++ K + RIDG +RQ+ + F + + ++
Sbjct: 556 KMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQFSSEVKIA-IIGVE 614
Query: 718 AGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
AGG+G++ + A V+ + P LQA RAHR GQT+ V
Sbjct: 615 AGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAV 656
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 656 GHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLS 715
G + +++TQ+ MLDLLE Y R DGK+ R + FN ++S
Sbjct: 1114 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSV-MIMS 1172
Query: 716 TRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
+A LG+N+ A VI+ D WNP + QA+ RAHR+GQT V
Sbjct: 1173 LKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPV 1216
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 136/365 (37%), Gaps = 94/365 (25%)
Query: 340 ILADEMGLGKTIQSIAF----------------------------------------LAS 359
ILAD+ GLGKT+ +IA L
Sbjct: 566 ILADDQGLGKTVSTIALILTERSTPYLPCEEDSKNGGCNQSDHSQVVFNENKVVEDSLCK 625
Query: 360 LYKEGISPHLVVAPLSTLRNWEREF---ATWAPQMNVVMYVGSAQAR---------TVIR 407
+ + L+V P S +R W E T ++V++Y G ++ + VI
Sbjct: 626 MRGRPAAGTLIVCPTSLMRQWADELRKKVTLEAHLSVLVYHGCSRTKDPHELAKYDVVIT 685
Query: 408 EYEFY---FPXXXXXXXXXXSGQI---------VSESKQD-----------RIKFDVLLT 444
Y P G I +K+D R D
Sbjct: 686 TYSLVSVEVPKQPRDRADEEKGGIHDGGVESVGFGSNKKDLPNSQKKGTKKRKHMDC--- 742
Query: 445 SYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLD 504
E + + L + W +++DE +KN ++ + + ++ R L+GTP+QN++
Sbjct: 743 --EPVEFLSGPLAQVSWFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIA 800
Query: 505 ELFMLMHFLDAGKFGSLEEFQEEFKDINQE---EQISRLHKMLAPHLLRRVKKDVMK--- 558
+L+ FL + S + F E K+ E L +L +LRR K ++
Sbjct: 801 DLYSYFRFLKYDPYSSYQTFCETIKNPISSYPGEGYKTLQAILKKVMLRRTKDTLLDGKP 860
Query: 559 --ELPPKKELILRVELSSKQKEYYKAILTRN---YQLLTRRGGAQISLINV---VMELRK 610
LPPK + RV+ + +++++Y + + ++ G + + +N+ ++ LR+
Sbjct: 861 VISLPPKSIELRRVDFTKEERDFYSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQ 920
Query: 611 LCCHP 615
C HP
Sbjct: 921 ACGHP 925
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 650 VKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSR 709
V +K G + ++++Q+ ML+LLE Y R+DG + A R + FN
Sbjct: 959 VPIKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVT 1018
Query: 710 FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
++S +A LG+N+ A V++ D WNP + QA+ RAHR+GQT V
Sbjct: 1019 V-MIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPV 1067
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 14/179 (7%)
Query: 456 LKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDA 515
L + W +++DE +KN +++ + ++ R L+GTP+QN++D+L+ FL
Sbjct: 624 LAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 683
Query: 516 GKFGSLEEFQEEFKDI---NQEEQISRLHKMLAPHLLRRVKKDVMK-----ELPPKKELI 567
+ S F K+ N + +L +L +LRR K ++ LPPK +
Sbjct: 684 DPYSSYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIEL 743
Query: 568 LRVELSSKQKEYYKAILTRN---YQLLTRRGGAQISLINV---VMELRKLCCHPFMLEG 620
+V+ + +++++Y + + ++ G + + +N+ ++ LR+ C HP ++ G
Sbjct: 744 RKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLVNG 802
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 650 VKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSR 709
V +K G + ++++Q+ ML+LLE Y R+DG + A R + FN
Sbjct: 1117 VPIKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVT 1176
Query: 710 FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
++S +A LG+N+ A V++ D WNP + QA+ RAHR+GQT V
Sbjct: 1177 V-MIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPV 1225
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 14/179 (7%)
Query: 456 LKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDA 515
L + W +++DE +KN +++ + ++ R L+GTP+QN++D+L+ FL
Sbjct: 782 LAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 841
Query: 516 GKFGSLEEFQEEFKDI---NQEEQISRLHKMLAPHLLRRVKKDVMK-----ELPPKKELI 567
+ S F K+ N + +L +L +LRR K ++ LPPK +
Sbjct: 842 DPYSSYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIEL 901
Query: 568 LRVELSSKQKEYYKAILTRN---YQLLTRRGGAQISLINV---VMELRKLCCHPFMLEG 620
+V+ + +++++Y + + ++ G + + +N+ ++ LR+ C HP ++ G
Sbjct: 902 RKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLVNG 960
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 658 RVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTR 717
+ +I++Q+ MLDL+E + R+DG + A R + F+ K + L+S +
Sbjct: 894 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVKV-MLMSLK 952
Query: 718 AGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
AG LG+N+ A VI+ D WNP + QA+ RAHR+GQT V
Sbjct: 953 AGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPV 994
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 41/264 (15%)
Query: 361 YKEGISPHLVVAPLSTLRNWEREF---ATWAPQMNVVMYVGSAQAR--TVIREYEFYFPX 415
+K + L+V P S +R W RE + +++V++Y GS + + + EY+
Sbjct: 409 WKRPAAGTLIVCPASVVRQWARELDEKVSEESKLSVLVYHGSNRTKDPNELAEYDVVVTT 468
Query: 416 XXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINL----------------------DT 453
+ +V E + D D + N DT
Sbjct: 469 YAIVTNEAPNKFLVDEDENDEKNTDRYGLASGFSNNKKRKVVVGASKKSKRRGRKSTNDT 528
Query: 454 TS------LKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELF 507
+S L + W +++DE +KN +++ S ++ R L+GTP+QN +D+L+
Sbjct: 529 SSEPDCGPLGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLY 588
Query: 508 MLMHFLDAGKFGSLEEFQEEFK---DINQEEQISRLHKMLAPHLLRRVKKDVMK-----E 559
FL + + F K N + +L +L +LRR K ++
Sbjct: 589 SYFRFLRYDPYAVYKSFYSTIKVPISRNSCQGYKKLQAVLRAIMLRRTKGTLLDGKPIIN 648
Query: 560 LPPKKELILRVELSSKQKEYYKAI 583
LPPK + +V+ S ++ +YK +
Sbjct: 649 LPPKVVNLSQVDFSVAERSFYKKL 672
>AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22536293-22540610 REVERSE
LENGTH=1022
Length = 1022
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 14/179 (7%)
Query: 456 LKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDA 515
L + W +++DE +KN +++ + ++ R L+GTP+QN++D+L+ FL
Sbjct: 789 LAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 848
Query: 516 GKFGSLEEFQEEFKDI---NQEEQISRLHKMLAPHLLRRVKKDVMK-----ELPPKKELI 567
+ S F K+ N + +L +L +LRR K ++ LPPK +
Sbjct: 849 DPYSSYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIEL 908
Query: 568 LRVELSSKQKEYYKAILTRN---YQLLTRRGGAQISLINV---VMELRKLCCHPFMLEG 620
+V+ + +++++Y + + ++ G + + +N+ ++ LR+ C HP ++ G
Sbjct: 909 RKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLVNG 967
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 126/298 (42%), Gaps = 47/298 (15%)
Query: 369 LVVAPLSTLRNWEREF---ATWAPQMNVVMYVGSAQARTVIR--EYEFYFPXXXXXXXXX 423
L+V P S +R W RE T +++V++Y G + + I +Y+
Sbjct: 346 LIVCPASVVRQWARELDEKVTDEAKLSVLIYHGGNRTKDPIELAKYDVVMTTYAIVSNEV 405
Query: 424 XSGQIVSESKQD----------------RIKFDVLLTSY------------EMINLDTTS 455
+V + + D + + +V+ T+ + + D+ +
Sbjct: 406 PKQPLVDDDENDEKNSEKYGLASGFSINKKRKNVVGTTKKSKKKKGNNNAGDSSDPDSGT 465
Query: 456 LKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDA 515
L + W +++DE +KN +++ + ++ R L+GTP+QN +D+L+ FL
Sbjct: 466 LAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLKY 525
Query: 516 GKFGSLEEFQEEFKDI---NQEEQISRLHKMLAPHLLRRVKKDVMK-----ELPPKKELI 567
+ + F + K N + +L +L +LRR K ++ LPPK +
Sbjct: 526 DPYAVYKSFCHQIKGPISRNSLQGYKKLQAVLRAIMLRRTKGTLLDGQPIINLPPKTINL 585
Query: 568 LRVELSSKQKEYYKAILT---RNYQLLTRRGGAQISLINV---VMELRKLCCHPFMLE 619
+V+ S +++ +Y + + ++ G + N+ ++ LR+ C HP +++
Sbjct: 586 SQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRLRQACDHPQLVK 643
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 658 RVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTR 717
+ +I++Q+ MLDL+E + R+DG + R + F+ + ++S +
Sbjct: 828 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKV-MIMSLK 886
Query: 718 AGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 759
AG LG+N+ A VI+ D WNP + QA+ RAHR+GQT V
Sbjct: 887 AGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPV 928
>AT2G40770.1 | Symbols: | zinc ion binding;DNA
binding;helicases;ATP binding;nucleic acid binding |
chr2:17013535-17021315 REVERSE LENGTH=1664
Length = 1664
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 31/191 (16%)
Query: 454 TSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFL 513
T L I W + +DE +++ + + ++HR +TGTP+Q LD+LF L+ FL
Sbjct: 593 TPLTRIFWWRICLDEAQMVESNAAAATEMALRLYTKHRWCITGTPIQRKLDDLFGLLKFL 652
Query: 514 DAGKFGSLEEFQEEFKDINQEEQISRL---HKMLAPHLLRRVKKDVMKE--LPPKKELIL 568
A F + E +D + + HK + R K V E LPP++E +
Sbjct: 653 KANPFDVSRWWIEVIRDPYERRDTKAMEFTHKFFKQVMWRSSKVHVADELQLPPQEECVS 712
Query: 569 RVELSSKQKEYY-------------------KAILTRNYQ-----LLTRRGGAQISLINV 604
++ S+ ++ +Y + IL R + L+T A+ L+N
Sbjct: 713 WLKFSAIEEHFYSRQHDTCVSYAREVIETLKRDILKRGHTSSDNPLVTHAEAAK--LLNS 770
Query: 605 VMELRKLCCHP 615
+++LR+ CCHP
Sbjct: 771 LLKLRQACCHP 781
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 636 LESSGKLQLLD---KMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGG 692
++S K++ L + MV+ ++ + ++++QF LDL+ ++ G +
Sbjct: 658 FQTSTKIEALREEIRFMVE-RDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTM 716
Query: 693 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 752
A R I++F R FL+S +AGG+ +NL A V + D WNP + QA R HR
Sbjct: 717 AARDTAINKFKEDPDCRV-FLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHR 775
Query: 753 LGQ 755
+GQ
Sbjct: 776 IGQ 778
>AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 26/155 (16%)
Query: 608 LRKLCCHPFMLEG-VEPDIDDPKEFHKQL---LESSGKLQLLDKMMVKLKEQGHRVLIYT 663
+RK C HP++++ ++ + E H+ L +++SGKL LLDKM+ +K+ G + +++
Sbjct: 523 VRKTCDHPYVMDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFY 582
Query: 664 QFQH------MLDLLEDYC-------SYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRF 710
Q + ++LED+ SY+ +Y +++ I+ FN K S
Sbjct: 583 QATQTPEGLLLGNILEDFVGQRFGPKSYEHGIY--------SSKKNSAINNFN-KESQCC 633
Query: 711 CFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQ 745
LL TRA I L AD I++ S NP D++
Sbjct: 634 VLLLETRACSQTIKLLRADAFILFGSSLNPSHDVK 668
>AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 26/155 (16%)
Query: 608 LRKLCCHPFMLEG-VEPDIDDPKEFHKQL---LESSGKLQLLDKMMVKLKEQGHRVLIYT 663
+RK C HP++++ ++ + E H+ L +++SGKL LLDKM+ +K+ G + +++
Sbjct: 523 VRKTCDHPYVMDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFY 582
Query: 664 QFQH------MLDLLEDYC-------SYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRF 710
Q + ++LED+ SY+ +Y +++ I+ FN K S
Sbjct: 583 QATQTPEGLLLGNILEDFVGQRFGPKSYEHGIY--------SSKKNSAINNFN-KESQCC 633
Query: 711 CFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQ 745
LL TRA I L AD I++ S NP D++
Sbjct: 634 VLLLETRACSQTIKLLRADAFILFGSSLNPSHDVK 668
>AT5G22760.1 | Symbols: | PHD finger family protein |
chr5:7571635-7577662 FORWARD LENGTH=1566
Length = 1566
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 79 DAKEDSCQACGESGNLLSCETCTYAYHSKCLLPPFKGPLPDN-WRCPECV 127
DA D C+ CG G LL C+ C AYHS+C + K +PD W CPEC
Sbjct: 410 DANSDECRLCGMDGTLLCCDGCPLAYHSRC-IGVVKMYIPDGPWYCPECT 458
>AT5G35210.1 | Symbols: | metalloendopeptidases;zinc ion
binding;DNA binding | chr5:13474499-13482238 REVERSE
LENGTH=1706
Length = 1706
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 79 DAKEDSCQACGESGNLLSCETCTYAYHSKCLLPPFKGPLPDN-WRCPECV 127
D D C+ CG G LL C+ C AYHS+C + K +PD W CPEC
Sbjct: 408 DGNSDECRICGMDGTLLCCDGCPLAYHSRC-IGVVKMYIPDGPWFCPECT 456
>AT5G35210.2 | Symbols: | metalloendopeptidases;zinc ion
binding;DNA binding | chr5:13476213-13482238 REVERSE
LENGTH=1539
Length = 1539
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 79 DAKEDSCQACGESGNLLSCETCTYAYHSKCLLPPFKGPLPDN-WRCPECV 127
D D C+ CG G LL C+ C AYHS+C + K +PD W CPEC
Sbjct: 408 DGNSDECRICGMDGTLLCCDGCPLAYHSRC-IGVVKMYIPDGPWFCPECT 456