Miyakogusa Predicted Gene
- Lj1g3v1820910.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1820910.2 Non Chatacterized Hit- tr|I1K8P5|I1K8P5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49070
PE,86.13,0,coiled-coil,NULL; no description,Zinc finger,
RING/FYVE/PHD-type; no description,NULL; SNF2_N,SNF2-r,CUFF.28143.2
(1425 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 1761 0.0
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 1118 0.0
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 1039 0.0
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 551 e-156
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 544 e-154
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 403 e-112
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 403 e-112
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 403 e-112
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 400 e-111
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 400 e-111
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 369 e-102
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 360 4e-99
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 347 5e-95
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 346 5e-95
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 346 8e-95
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 331 3e-90
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 330 4e-90
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 319 1e-86
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 294 3e-79
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 293 9e-79
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 261 2e-69
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 259 1e-68
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 229 8e-60
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 217 5e-56
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 217 5e-56
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 216 1e-55
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 207 6e-53
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 204 3e-52
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 204 4e-52
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 201 2e-51
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 140 6e-33
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 129 1e-29
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 129 2e-29
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 115 2e-25
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 114 6e-25
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 114 7e-25
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 114 7e-25
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 114 7e-25
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 102 1e-21
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 99 2e-20
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 96 2e-19
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 86 1e-16
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 80 1e-14
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 80 2e-14
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 79 2e-14
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 79 2e-14
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 79 2e-14
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 79 3e-14
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 79 3e-14
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 78 6e-14
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 77 1e-13
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 71 5e-12
AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein / ... 70 7e-12
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 68 5e-11
AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 67 8e-11
AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 67 8e-11
AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases... 65 3e-10
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 64 9e-10
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 64 1e-09
AT5G22760.1 | Symbols: | PHD finger family protein | chr5:75716... 54 1e-06
AT5G35210.1 | Symbols: | metalloendopeptidases;zinc ion binding... 52 3e-06
AT5G35210.2 | Symbols: | metalloendopeptidases;zinc ion binding... 52 4e-06
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 1761 bits (4560), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 885/1349 (65%), Positives = 1035/1349 (76%), Gaps = 44/1349 (3%)
Query: 1 MSSLVERLRVRSDRRPVYNLDESDDDDLLPKKPGTVLENMERIVRSDAKEDSCQACGESG 60
MSSLVERLR+RSDR+PVYNLD+SDDDD +PKK T E +E IVR+DAKE++CQACGES
Sbjct: 1 MSSLVERLRIRSDRKPVYNLDDSDDDDFVPKKDRT-FEQVEAIVRTDAKENACQACGEST 59
Query: 61 NLLSCETCTYAYHSKCLLPPFKGPLPDNWRCPECVSPLNDIDKLLDCEMRPTVADDSDAT 120
NL+SC TCTYA+H+KCL+PP K +NWRCPECVSPLN+IDK+LDCEMRPT + + ++
Sbjct: 60 NLVSCNTCTYAFHAKCLVPPLKDASVENWRCPECVSPLNEIDKILDCEMRPTKSSEQGSS 119
Query: 121 KLGSKQTFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKNHPRLKTKVNNFHRQMASVNTSD 180
K FVKQYLVKWKGLSYLHC+WVPEKEF KA+K++ RLKT+VNNFHRQM S N S+
Sbjct: 120 DAEPKPIFVKQYLVKWKGLSYLHCSWVPEKEFQKAYKSNHRLKTRVNNFHRQMESFNNSE 179
Query: 181 EDFVAIRPEWTTVDRIIASRGGDDEEREYFVKWKELPYDECYWEYESDISAFQPEIEKFH 240
+DFVAIRPEWTTVDRI+A R +D E EY VK+KEL YDECYWE ESDIS FQ EI++F
Sbjct: 180 DDFVAIRPEWTTVDRILACRE-EDGELEYLVKYKELSYDECYWESESDISTFQNEIQRFK 238
Query: 241 XXXXXXXXXXXXXXXXNFKDDGELTKQQKEFQQYENSPEFLSGGTLHPYQLEGLNFLRFS 300
N +D FQQ++++PEFL G LHPYQLEGLNFLRFS
Sbjct: 239 DVNSRTRRSKDVDHKRNPRD----------FQQFDHTPEFLKG-LLHPYQLEGLNFLRFS 287
Query: 301 WSKQTHVILADEMGLGKTIQSIAFLASLYKEGISPHLVVAPLSTLRNWEREFATWAPQMN 360
WSKQTHVILADEMGLGKTIQSIA LASL++E + PHLV+APLSTLRNWEREFATWAPQMN
Sbjct: 288 WSKQTHVILADEMGLGKTIQSIALLASLFEENLIPHLVIAPLSTLRNWEREFATWAPQMN 347
Query: 361 VVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLD 420
VVMY G+AQAR VIRE+EFY SGQI SESKQ RIKFDVLLTSYEMINLD
Sbjct: 348 VVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLD 407
Query: 421 TTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHF 480
+ LKPIKWE MIVDEGHRLKNKDSKLFSSLTQYSS HR+LLTGTPLQNNLDELFMLMHF
Sbjct: 408 SAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHF 467
Query: 481 LDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVEL 540
LDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMK++PPKKELILRV+L
Sbjct: 468 LDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDL 527
Query: 541 SSKQKEYYKAILTRNYQLLTRRGGAQISLINVVMELRKLCCHPFMLEGVEPDIDDPKEFH 600
SS QKEYYKAI TRNYQ+LT++GGAQISL N++MELRK+CCHP+MLEGVEP I D E
Sbjct: 528 SSLQKEYYKAIFTRNYQVLTKKGGAQISLNNIMMELRKVCCHPYMLEGVEPVIHDANEAF 587
Query: 601 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGG 660
KQLLES GKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYC++KKW YERIDGKVGG
Sbjct: 588 KQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGG 647
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
AERQIRIDRFNAKNS++FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR
Sbjct: 648 AERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 707
Query: 721 LGQTNKVLIYRLITRGTIXXXXXXXXXXXXVLEHLVVGRLKAQNINQEELDDIIRYGSKE 780
LGQTNKV+IYRLI RGTI VLEHLVVG+LK QNINQEELDDIIRYGSKE
Sbjct: 708 LGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQNINQEELDDIIRYGSKE 767
Query: 781 LFAEENDEAVKSRQIHYXXXXXXXXXXXXQVGXXXXXXXXXXXNGFLKAFKVANFEYVDX 840
LFA E+DEA KS +IHY V NGFLKAFKVANFEY+D
Sbjct: 768 LFASEDDEAGKSGKIHYDDAAIDKLLDRDLVEAEEVSVDDEEENGFLKAFKVANFEYIDE 827
Query: 841 XXXXXXXXQKKAMETVNNS--SDRTHFWEELLGDKYQEHKVEEFNTLGKGKRNRKLMVSV 898
Q+ A E+ +++ SDR +WEELL DK++ H+ EE N LGK KR+RK +VS+
Sbjct: 828 NEAAALEAQRVAAESKSSAGNSDRASYWEELLKDKFELHQAEELNALGKRKRSRKQLVSI 887
Query: 899 EDDDLAGLEDVSSDGEDDNYEAELSDGETNSIGGGAPIARKPYKKKARTDSTEPLPLMEG 958
E+DDLAGLEDVSSDG D++YEAE +DGE + G G R+PY++K R D+ EP PLMEG
Sbjct: 888 EEDDLAGLEDVSSDG-DESYEAESTDGE--AAGQGVQTGRRPYRRKGR-DNLEPTPLMEG 943
Query: 959 EGKAFRVLGFNQNQRAAFVQILMRFGVGDFDWKEFTSRMKQKTYEEIKDYGTLFLSHIAE 1018
EG++FRVLGFNQ+QRA FVQ LMR+G G+FDWKEF R+KQKT+EEI +YG LFL HIAE
Sbjct: 944 EGRSFRVLGFNQSQRAIFVQTLMRYGAGNFDWKEFVPRLKQKTFEEINEYGILFLKHIAE 1003
Query: 1019 DI-TDSLTFTDGVPKEGLRIQDXXXXXXXXXXXXDKVRFASEHPQTPLFSDDILSRYSGL 1077
+I +S TF+DGVPKEGLRI+D +KV+F +HP P+F IL R+ GL
Sbjct: 1004 EIDENSPTFSDGVPKEGLRIEDVLVRIALLILVQEKVKFVEDHPGKPVFPSRILERFPGL 1063
Query: 1078 KGAKIWKEEHDLVLLRAVLKHGYGRWQAIVDDKDLKIQELICQELNLPTINLPLPGQVGS 1137
+ KIWKEEHD +++RAVLKHGYGRWQAIVDDK+L IQELIC+ELN P I+L Q G
Sbjct: 1064 RSGKIWKEEHDKIMIRAVLKHGYGRWQAIVDDKELGIQELICKELNFPHISLSAAEQAGL 1123
Query: 1138 QAQNGANLTSAEVPANQSRENGGSDIT------ADGAQGSGDAKNQPQLYQDSSILYHFR 1191
Q QNG+ ++ P Q+ +N GS IT ADGAQ + ++++R
Sbjct: 1124 QGQNGSGGSN---PGAQTNQNPGSVITGNNNASADGAQVNS--------------MFYYR 1166
Query: 1192 DMQRRQVEFVKKRVLLLEKGLNAEYQKEYFGDPKANEVTNEQLKSEPKAANFPSYKSRDM 1251
DMQRR VEFVKKRVLLLEK +N EY +EY+G ++ + E+ ++EPK A+ ++
Sbjct: 1167 DMQRRLVEFVKKRVLLLEKAMNYEYAEEYYGLGGSSSIPTEEPEAEPKIADTVGVSFIEV 1226
Query: 1252 DTQMIDQLPQVEKIALEDISGAC-DNDPNRMELVRLYNEMCKVVLENPMDLGQTSLARQS 1310
D +M+D LP+ + I E+I GA DN+ R+E+ + YN+MCK++ EN + Q + Q
Sbjct: 1227 DDEMLDGLPKTDPITSEEIMGAAVDNNQARVEIAQHYNQMCKLLDENARESVQAYVNNQP 1286
Query: 1311 VDANAVKNFQPLESICEDINRILAPTEDQ 1339
++F+ L+SI +IN IL+ T DQ
Sbjct: 1287 PSTKVNESFRALKSINGNINTILSITSDQ 1315
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative |
chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/1060 (55%), Positives = 739/1060 (69%), Gaps = 79/1060 (7%)
Query: 97 PLNDIDKLLDCEMRPTVADDSDATKLGSKQ-TFVKQYLVKWKGLSYLHCTWVPEKEFLKA 155
PL +I+K+LD E RPT +++ +++ G+ VKQYLVKWKGLSYLHC+WVPE+EF KA
Sbjct: 43 PLGEIEKILDREWRPTASNNPNSSDNGTPTLVVVKQYLVKWKGLSYLHCSWVPEQEFEKA 102
Query: 156 FKNHPRLKTK--VNNFHRQMAS--VNTSDEDFVAIRPEWTTVDRIIASRGGDDEEREYFV 211
+K+HP LK K V F+ M +F+AIRPEW TVDRIIA R GDD E EY V
Sbjct: 103 YKSHPHLKLKLRVTRFNAAMDVFIAENGAHEFIAIRPEWKTVDRIIACREGDDGE-EYLV 161
Query: 212 KWKELPYDECYWEYESDISAFQPEIEKFHXXXXXXXXXXXXXXXXNFKDDGELTKQQKEF 271
K+KEL Y YWE ESDIS FQ EI++F N ++EF
Sbjct: 162 KYKELSYRNSYWESESDISDFQNEIQRFKDINSSSRRDKYVENERN----------REEF 211
Query: 272 QQYENSPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYKE 331
+Q++ +PEFL+G TLH YQLEGLNFLR+SWSK+T+VILADEMGLGKTIQSIAFLASL++E
Sbjct: 212 KQFDLTPEFLTG-TLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEE 270
Query: 332 GISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXX 391
+SPHLVVAPLST+RNWEREFATWAP MNVVMY G ++AR VI E+EFYF
Sbjct: 271 NLSPHLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYF---------- 320
Query: 392 XSGQIVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSL 451
S+ + KFDVLLT+YEM++ + L PIKW MI+DEGHRLKN+ SKL+SSL
Sbjct: 321 --------SEGRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSL 372
Query: 452 TQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHKM 511
+Q++S+H VLLTGTPLQNNL+ELF LMHFLDA KFGSLE+FQ DIN+EEQISRLH+M
Sbjct: 373 SQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGSLEKFQ----DINKEEQISRLHQM 428
Query: 512 LAPHLLRRVKKDVMKE-LPPKKELILRVELSSKQKEYYKAILTRNYQLLTRRGGAQISLI 570
LAPHLLRR+KKDV+K+ +PPKKELILRV++SS+QKE YKA++T NYQ+LT++ A+IS
Sbjct: 429 LAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQVLTKKRDAKIS-- 486
Query: 571 NVVMELRKLCCHPFMLEGVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIY 630
NV+M+LR++C HP++L EP +D E +LLE+SGKLQLLDKMMVKLKEQGHRVLIY
Sbjct: 487 NVLMKLRQVCSHPYLLPDFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIY 546
Query: 631 TQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLG 690
TQFQH L LLEDY ++K W YERIDGK+ G ERQ+RIDRFNA+NS+RFCFLLSTRAGG+G
Sbjct: 547 TQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIG 606
Query: 691 INLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTIXXXXXXXXXXXX 750
INLATADTVIIYDSDWNPHADLQAMAR HRLGQTNKV+IYRLI +GT+
Sbjct: 607 INLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKM 666
Query: 751 VLEHLVVGRLKAQNINQEELDDIIRYGSKELFAEENDEAVKSRQIHYXXXXXXXXXXXXQ 810
+LEHLVVG+ Q++ Q+ELDDII+YGSKELF+EENDEA +S +IHY
Sbjct: 667 LLEHLVVGK---QHLCQDELDDIIKYGSKELFSEENDEAGRSGKIHYDDAAIEQLLDRNH 723
Query: 811 VGXXXXXXXXXXXNGFLKAFKVANFEYVDXXXXXXXXXQKKAMETVNNSS----DRTHFW 866
V FLK FKVA+FEYVD ++A NNSS DRT W
Sbjct: 724 VDAVEVSLDDEEETDFLKNFKVASFEYVD--DENEAAALEEAQAIENNSSVRNADRTSHW 781
Query: 867 EELLGDKYQEHKVEEFNTLGKGKRNRKLMVSVEDDDLAGLEDVSSDGEDDNYEAELSDGE 926
++LL DKY+ + EE + LGK KRN K ++ E DDL GLE++ SD ED E L D +
Sbjct: 782 KDLLKDKYEVQQAEELSALGKRKRNGKQVMYAE-DDLDGLEEI-SDEED---EYCLDDLK 836
Query: 927 TNSIGGGAP------------IARKPYKKKARTDSTEPLPLMEGEGKAFRVLGFNQNQRA 974
S +PY+K+AR D++E +PLMEGEG+ VLGFN+ +R
Sbjct: 837 VTSDEEEEADEPEAARQRKPRTVTRPYRKRAR-DNSEEIPLMEGEGRYLMVLGFNETERD 895
Query: 975 AFVQILMRFGVGDFDWKEFTSRMKQKTYEEIKDYGTLFLSHIAEDITD---------SLT 1025
F++ R+G G+FDWKEF + + KTY+EI YG LFL HIAE+ TD ++
Sbjct: 896 IFLRTFKRYGAGNFDWKEFVNPLYMKTYDEINKYGILFLKHIAENPTDNSTNFKVITAMV 955
Query: 1026 FTDGVPKEGLRIQDXXXXXXXXXXXXDKVRFASEHPQTPLFSDDILSRYSGLKGAKIWKE 1085
+ DGVPKEG+ + +K +F HP P+FS+ ++S+Y+ L+ KE
Sbjct: 956 YADGVPKEGISSDELLVSMTFMMLVKEKCQFLDNHPTAPVFSNYVISKYN-LRNGAFSKE 1014
Query: 1086 EHDLVLLRAVLKHGYGRWQAIVDDKDLKIQELICQELNLP 1125
EHD +L+ AV KHGYGRW AIV+D+++ QE+ C++LN+P
Sbjct: 1015 EHDRILIPAVSKHGYGRWVAIVEDEEIGFQEVACKDLNIP 1054
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative |
chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 1039 bits (2687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/970 (56%), Positives = 680/970 (70%), Gaps = 74/970 (7%)
Query: 182 DFVAIRPEWTTVDRIIASRGGDDEEREYFVKWKELPYDECYWEYESDISAFQPEIEKFHX 241
+F+AIRPEW TVDRIIA R GDD E EY VK+KEL Y YWE ESDIS FQ EI++F
Sbjct: 92 EFIAIRPEWKTVDRIIACREGDDGE-EYLVKYKELSYRNSYWESESDISDFQNEIQRFKD 150
Query: 242 XXXXXXXXXXXXXXXNFKDDGELTKQQKEFQQYENSPEFLSGGTLHPYQLEGLNFLRFSW 301
N ++EF+Q++ +PEFL+G TLH YQLEGLNFLR+SW
Sbjct: 151 INSSSRRDKYVENERN----------REEFKQFDLTPEFLTG-TLHTYQLEGLNFLRYSW 199
Query: 302 SKQTHVILADEMGLGKTIQSIAFLASLYKEGISPHLVVAPLSTLRNWEREFATWAPQMNV 361
SK+T+VILADEMGLGKTIQSIAFLASL++E +SPHLVVAPLST+RNWEREFATWAP MNV
Sbjct: 200 SKKTNVILADEMGLGKTIQSIAFLASLFEENLSPHLVVAPLSTIRNWEREFATWAPHMNV 259
Query: 362 VMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLDT 421
VMY G ++AR VI E+EFYF S+ + KFDVLLT+YEM++
Sbjct: 260 VMYTGDSEARDVIWEHEFYF------------------SEGRKSKFDVLLTTYEMVHPGI 301
Query: 422 TSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFL 481
+ L PIKW MI+DEGHRLKN+ SKL+SSL+Q++S+H VLLTGTPLQNNL+ELF LMHFL
Sbjct: 302 SVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFL 361
Query: 482 DAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKE-LPPKKELILRVEL 540
DA KFGSLE+FQ DIN+EEQISRLH+MLAPHLLRR+KKDV+K+ +PPKKELILRV++
Sbjct: 362 DADKFGSLEKFQ----DINKEEQISRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDM 417
Query: 541 SSKQKEYYKAILTRNYQLLTRRGGAQISLINVVMELRKLCCHPFMLEGVEPDIDDPKEFH 600
SS+QKE YKA++T NYQ+LT++ A+IS NV+M+LR++C HP++L EP +D E
Sbjct: 418 SSQQKEVYKAVITNNYQVLTKKRDAKIS--NVLMKLRQVCSHPYLLPDFEPRFEDANEAF 475
Query: 601 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGG 660
+LLE+SGKLQLLDKMMVKLKEQGHRVLIYTQFQH L LLEDY ++K W YERIDGK+ G
Sbjct: 476 TKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISG 535
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
ERQ+RIDRFNA+NS+RFCFLLSTRAGG+GINLATADTVIIYDSDWNPHADLQAMAR HR
Sbjct: 536 PERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHR 595
Query: 721 LGQTNKVLIYRLITRGTIXXXXXXXXXXXXVLEHLVVGRLKAQNINQEELDDIIRYGSKE 780
LGQTNKV+IYRLI +GT+ +LEHLVVG+ Q++ Q+ELDDII+YGSKE
Sbjct: 596 LGQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVVGK---QHLCQDELDDIIKYGSKE 652
Query: 781 LFAEENDEAVKSRQIHYXXXXXXXXXXXXQVGXXXXXXXXXXXNGFLKAFKVANFEYVDX 840
LF+EENDEA +S +IHY V FLK FKVA+FEYVD
Sbjct: 653 LFSEENDEAGRSGKIHYDDAAIEQLLDRNHVDAVEVSLDDEEETDFLKNFKVASFEYVD- 711
Query: 841 XXXXXXXXQKKAMETVNNSS----DRTHFWEELLGDKYQEHKVEEFNTLGKGKRNRKLMV 896
++A NNSS DRT W++LL DKY+ + EE + LGK KRN K ++
Sbjct: 712 -DENEAAALEEAQAIENNSSVRNADRTSHWKDLLKDKYEVQQAEELSALGKRKRNGKQVM 770
Query: 897 SVEDDDLAGLEDVSSDGEDDNYEAELSDGETNSIGGGAP------------IARKPYKKK 944
E DDL GLE++ SD ED E L D + S +PY+K+
Sbjct: 771 YAE-DDLDGLEEI-SDEED---EYCLDDLKVTSDEEEEADEPEAARQRKPRTVTRPYRKR 825
Query: 945 ARTDSTEPLPLMEGEGKAFRVLGFNQNQRAAFVQILMRFGVGDFDWKEFTSRMKQKTYEE 1004
AR D++E +PLMEGEG+ VLGFN+ +R F++ R+G G+FDWKEF + + KTY+E
Sbjct: 826 AR-DNSEEIPLMEGEGRYLMVLGFNETERDIFLRTFKRYGAGNFDWKEFVNPLYMKTYDE 884
Query: 1005 IKDYGTLFLSHIAEDITD---------SLTFTDGVPKEGLRIQDXXXXXXXXXXXXDKVR 1055
I YG LFL HIAE+ TD ++ + DGVPKEG+ + +K +
Sbjct: 885 INKYGILFLKHIAENPTDNSTNFKVITAMVYADGVPKEGISSDELLVSMTFMMLVKEKCQ 944
Query: 1056 FASEHPQTPLFSDDILSRYSGLKGAKIWKEEHDLVLLRAVLKHGYGRWQAIVDDKDLKIQ 1115
F HP P+FS+ ++S+Y+ L+ KEEHD +L+ AV KHGYGRW AIV+D+++ Q
Sbjct: 945 FLDNHPTAPVFSNYVISKYN-LRNGAFSKEEHDRILIPAVSKHGYGRWVAIVEDEEIGFQ 1003
Query: 1116 ELICQELNLP 1125
E+ C++LN+P
Sbjct: 1004 EVACKDLNIP 1013
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 551 bits (1419), Expect = e-156, Method: Compositional matrix adjust.
Identities = 320/742 (43%), Positives = 442/742 (59%), Gaps = 67/742 (9%)
Query: 131 QYLVKWKGLSYLHCTW--VPEKEFLKAFKNHPRLKTKVNN-------FHRQMASVN-TSD 180
++L+KWKG S+LHC W + + + L FK KV R+ VN S
Sbjct: 463 EFLIKWKGQSHLHCQWKTLSDLQNLSGFKKVLNYTKKVTEEIRYRTALSREEIEVNDVSK 522
Query: 181 EDFVAIRPEWTTVDRIIASR----GGDDEEREYFVKWKELPYDECYWEYESDISAFQPEI 236
E + I + + V+RIIA R G D EY VKW+ L Y E WE + DI+ Q I
Sbjct: 523 EMDLDIIKQNSQVERIIADRISKDGLGDVVPEYLVKWQGLSYAEATWEKDVDIAFAQVAI 582
Query: 237 EKFHXXXXXXXXXXXXXXXXNFKDDGELTKQQKEFQQYENSPEFLSGGTLHPYQLEGLNF 296
+++ + + TK + ++ + PE+L GGTL YQLEGLNF
Sbjct: 583 DEYKAREVSIAVQGKMV-------EQQRTKGKASLRKLDEQPEWLIGGTLRDYQLEGLNF 635
Query: 297 LRFSWSKQTHVILADEMGLGKTIQSIAFLASL--YKEGISPHLVVAPLSTLRNWEREFAT 354
L SW T+VILADEMGLGKT+QS++ L L ++ P LVV PLSTL NW +EF
Sbjct: 636 LVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPLSTLANWAKEFRK 695
Query: 355 WAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESKQDR-IKFDVLLTS 413
W P MN+++YVG+ +R V ++YEFY +E K R IKF+ LLT+
Sbjct: 696 WLPGMNIIVYVGTRASREVCQQYEFY-----------------NEKKVGRPIKFNALLTT 738
Query: 414 YEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDE 473
YE++ D L IKW ++VDE HRLKN +++L+++L ++S+++++L+TGTPLQN+++E
Sbjct: 739 YEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEE 798
Query: 474 LFMLMHFLDAGKFGSLEEFQEEFKDIN--QEEQISRLHKMLAPHLLRRVKKDVMKELPPK 531
L+ L+HFLD GKF + +EF E +K+++ E +++ LH L PH+LRRV KDV K LPPK
Sbjct: 799 LWALLHFLDPGKFKNKDEFVENYKNLSSFNESELANLHLELRPHILRRVIKDVEKSLPPK 858
Query: 532 KELILRVELSSKQKEYYKAILTRNYQLLTRR-GGAQISLINVVMELRKLCCHPFMLE--- 587
E ILRVE+S QK+YYK IL RN+ L + G Q+SL+N+V+EL+K C HPF+ E
Sbjct: 859 IERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESAD 918
Query: 588 -GVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSY 646
G DI+D + K +L SSGKL +LDK++V+L+E HRVLI++Q MLD+L +Y S
Sbjct: 919 HGYGGDINDNSKLDKIIL-SSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSL 977
Query: 647 KKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
+ + ++R+DG RQ +D FNA S FCFLLSTRAGGLGINLATADTV+I+DSDW
Sbjct: 978 RGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDW 1037
Query: 707 NPHADLQAMARAHRLGQTNKVLIYRLITRGTIXXXXXXXXXXXXVLEHLVV------GRL 760
NP DLQAM+RAHR+GQ V IYR +T ++ VL+HLV+ GRL
Sbjct: 1038 NPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGRL 1097
Query: 761 ------KAQNINQEELDDIIRYGSKELFAEE-NDEAVKSRQIHYXXXXXXXXXXXXQVGX 813
K N ++ EL I+R+G++ELF E+ NDE K R + +
Sbjct: 1098 EKRETKKGSNFDKNELSAILRFGAEELFKEDKNDEESKKRLLSMDIDEILERAEQVE--- 1154
Query: 814 XXXXXXXXXXNGFLKAFKVANF 835
+ L AFKVANF
Sbjct: 1155 --EKHTDETEHELLGAFKVANF 1174
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 544 bits (1402), Expect = e-154, Method: Compositional matrix adjust.
Identities = 302/699 (43%), Positives = 433/699 (61%), Gaps = 57/699 (8%)
Query: 112 TVADDSDATKLGSK------QTFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKNHPRLKTK 165
TVAD+ + +K +T ++LVKW S +H TW+ E E LK K K
Sbjct: 527 TVADEEIEEPVAAKTSDLIGETVSYEFLVKWVDKSNIHNTWISEAE-LKGLA-----KRK 580
Query: 166 VNNFHRQ--MASVNTSDEDFVAIRPEWTTVDRIIASRGGDDEEREYFVKWKELPYDECYW 223
+ N+ + A +N ++ +W RI+A R + +E +VKW L YDEC W
Sbjct: 581 LENYKAKYGTAVINICED-------KWKQPQRIVALRVSKEGNQEAYVKWTGLAYDECTW 633
Query: 224 EY--ESDISAFQPEIEKFHXXXXXXXXXXXXXXXXNFKDDGELTKQQKEFQQYENSPEFL 281
E E + I+ FH G T+++ E P+ L
Sbjct: 634 ESLEEPILKHSSHLIDLFHQYEQKTLERNSK---------GNPTRERGEVVTLTEQPQEL 684
Query: 282 SGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYKE-GIS-PHLVV 339
GG L +QLE LN+LR W K +VILADEMGLGKT+ + AFL+SLY E G++ P LV+
Sbjct: 685 RGGALFAHQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFGVARPCLVL 744
Query: 340 APLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSE 399
PLST+ NW EF+ WAP +NVV Y GSA+ R +IR+YE++ +
Sbjct: 745 VPLSTMPNWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWH-----------AKNSTGTT 793
Query: 400 SKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHR 459
K KF+VLLT+YEM+ D++ L+ + WE ++VDEGHRLKN +SKLFS L +S +HR
Sbjct: 794 KKPTSYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHR 853
Query: 460 VLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRR 519
VLLTGTPLQNN+ E++ L++FL F SL F+E F D+ E++ L K++APH+LRR
Sbjct: 854 VLLTGTPLQNNIGEMYNLLNFLQPSSFPSLSSFEERFHDLTSAEKVEELKKLVAPHMLRR 913
Query: 520 VKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTR--RGGAQISLINVVMELR 577
+KKD M+ +PPK E ++ VEL+S Q EYY+A+LT+NYQ+L +G AQ S++N+VM+LR
Sbjct: 914 LKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLR 973
Query: 578 KLCCHPFMLEGVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHML 637
K+C HP+++ G EP+ + H +++S KL LL M+ L ++GHRVLI++Q +L
Sbjct: 974 KVCNHPYLIPGTEPESGSLEFLHDMRIKASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLL 1033
Query: 638 DLLEDYCS--YKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLAT 695
D+LEDY + + +ER+DG V A+RQ I RFN ++ +RF FLLSTRA GLGINLAT
Sbjct: 1034 DILEDYLNIEFGPKTFERVDGSVAVADRQAAIARFN-QDKNRFVFLLSTRACGLGINLAT 1092
Query: 696 ADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTIXXXXXXXXXXXXVLEHL 755
ADTVIIYDSD+NPHAD+QAM RAHR+GQ+ ++L+YRL+ R ++ +L+ L
Sbjct: 1093 ADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQL 1152
Query: 756 VVGRLKAQNINQEELDDIIRYGSKELFAEENDEAVKSRQ 794
V + + +Q+E +DI+R+G++ELF ND A ++++
Sbjct: 1153 FVNK----SGSQKEFEDILRWGTEELF---NDSAGENKK 1184
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 53 CQACGESGNLLSCETCTYAYHSKCLLPPFKGPLPDNWRCPEC------VSPLNDIDKL 104
C C G+LL C++C YH+ CL PP K W CP+C + P+N +D +
Sbjct: 78 CVICDLGGDLLCCDSCPRTYHTACLNPPLKRIPNGKWICPKCSPNSEALKPVNRLDAI 135
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/511 (44%), Positives = 323/511 (63%), Gaps = 34/511 (6%)
Query: 284 GTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYK-EGIS-PHLVVAP 341
G + YQL GLN+L + + ILADEMGLGKT+Q+I+ LA L++ GI+ PH+VVAP
Sbjct: 187 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAP 246
Query: 342 LSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESK 401
STL NW E + P + V ++G+ + R IRE +G
Sbjct: 247 KSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE------------DLLVAG------- 287
Query: 402 QDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVL 461
KFD+ +TS+EM + T+L+ W +I+DE HR+KN++S L ++ +S+ +R+L
Sbjct: 288 ----KFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLL 343
Query: 462 LTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---DINQEEQISRLHKMLAPHLLR 518
+TGTPLQNNL EL+ L++FL F S E F E F+ + +Q+E + +LHK+L P LLR
Sbjct: 344 ITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLR 403
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTRRGGAQISLINVVMELRK 578
R+K DV K LPPKKE IL+V +S QK+YYKA+L ++ + + GG + L+N+ M+LRK
Sbjct: 404 RLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVN-AGGERKRLLNIAMQLRK 462
Query: 579 LCCHPFMLEGVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLD 638
C HP++ +G EP P L+ ++GK+ LLDK++ KLKE+ RVLI++Q +LD
Sbjct: 463 CCNHPYLFQGAEP--GPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 639 LLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADT 698
+LEDY Y+ +LY RIDG GG ER I+ +N S +F FLLSTRAGGLGINLATAD
Sbjct: 521 ILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 580
Query: 699 VIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTIXXXXXXXXXXXXVLEHLVV- 757
VI+YDSDWNP DLQA RAHR+GQ +V ++R T I L+ LV+
Sbjct: 581 VILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQ 640
Query: 758 -GRLKAQ-NINQEELDDIIRYGSKELFAEEN 786
GRL Q +N++EL ++RYG++ +F+ ++
Sbjct: 641 QGRLAEQKTVNKDELLQMVRYGAEMVFSSKD 671
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/511 (44%), Positives = 323/511 (63%), Gaps = 34/511 (6%)
Query: 284 GTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYK-EGIS-PHLVVAP 341
G + YQL GLN+L + + ILADEMGLGKT+Q+I+ LA L++ GI+ PH+VVAP
Sbjct: 187 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAP 246
Query: 342 LSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESK 401
STL NW E + P + V ++G+ + R IRE +G
Sbjct: 247 KSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE------------DLLVAG------- 287
Query: 402 QDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVL 461
KFD+ +TS+EM + T+L+ W +I+DE HR+KN++S L ++ +S+ +R+L
Sbjct: 288 ----KFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLL 343
Query: 462 LTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---DINQEEQISRLHKMLAPHLLR 518
+TGTPLQNNL EL+ L++FL F S E F E F+ + +Q+E + +LHK+L P LLR
Sbjct: 344 ITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLR 403
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTRRGGAQISLINVVMELRK 578
R+K DV K LPPKKE IL+V +S QK+YYKA+L ++ + + GG + L+N+ M+LRK
Sbjct: 404 RLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVN-AGGERKRLLNIAMQLRK 462
Query: 579 LCCHPFMLEGVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLD 638
C HP++ +G EP P L+ ++GK+ LLDK++ KLKE+ RVLI++Q +LD
Sbjct: 463 CCNHPYLFQGAEP--GPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 639 LLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADT 698
+LEDY Y+ +LY RIDG GG ER I+ +N S +F FLLSTRAGGLGINLATAD
Sbjct: 521 ILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 580
Query: 699 VIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTIXXXXXXXXXXXXVLEHLVV- 757
VI+YDSDWNP DLQA RAHR+GQ +V ++R T I L+ LV+
Sbjct: 581 VILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQ 640
Query: 758 -GRLKAQ-NINQEELDDIIRYGSKELFAEEN 786
GRL Q +N++EL ++RYG++ +F+ ++
Sbjct: 641 QGRLAEQKTVNKDELLQMVRYGAEMVFSSKD 671
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/511 (44%), Positives = 323/511 (63%), Gaps = 34/511 (6%)
Query: 284 GTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYK-EGIS-PHLVVAP 341
G + YQL GLN+L + + ILADEMGLGKT+Q+I+ LA L++ GI+ PH+VVAP
Sbjct: 187 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAP 246
Query: 342 LSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESK 401
STL NW E + P + V ++G+ + R IRE +G
Sbjct: 247 KSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE------------DLLVAG------- 287
Query: 402 QDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVL 461
KFD+ +TS+EM + T+L+ W +I+DE HR+KN++S L ++ +S+ +R+L
Sbjct: 288 ----KFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLL 343
Query: 462 LTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---DINQEEQISRLHKMLAPHLLR 518
+TGTPLQNNL EL+ L++FL F S E F E F+ + +Q+E + +LHK+L P LLR
Sbjct: 344 ITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLR 403
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTRRGGAQISLINVVMELRK 578
R+K DV K LPPKKE IL+V +S QK+YYKA+L ++ + + GG + L+N+ M+LRK
Sbjct: 404 RLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVN-AGGERKRLLNIAMQLRK 462
Query: 579 LCCHPFMLEGVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLD 638
C HP++ +G EP P L+ ++GK+ LLDK++ KLKE+ RVLI++Q +LD
Sbjct: 463 CCNHPYLFQGAEP--GPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 639 LLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADT 698
+LEDY Y+ +LY RIDG GG ER I+ +N S +F FLLSTRAGGLGINLATAD
Sbjct: 521 ILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 580
Query: 699 VIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTIXXXXXXXXXXXXVLEHLVV- 757
VI+YDSDWNP DLQA RAHR+GQ +V ++R T I L+ LV+
Sbjct: 581 VILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQ 640
Query: 758 -GRLKAQ-NINQEELDDIIRYGSKELFAEEN 786
GRL Q +N++EL ++RYG++ +F+ ++
Sbjct: 641 QGRLAEQKTVNKDELLQMVRYGAEMVFSSKD 671
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/511 (44%), Positives = 323/511 (63%), Gaps = 34/511 (6%)
Query: 284 GTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYK-EGIS-PHLVVAP 341
G L YQL GLN+L + + ILADEMGLGKT+Q+I+ LA L++ GI+ PH+VVAP
Sbjct: 192 GKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAP 251
Query: 342 LSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESK 401
STL NW E + P + V ++G+ + R IRE +G
Sbjct: 252 KSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE------------ELLVAG------- 292
Query: 402 QDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVL 461
KFD+ +TS+EM + T+L+ W +I+DE HR+KN++S L ++ +S+ +R+L
Sbjct: 293 ----KFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLL 348
Query: 462 LTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---DINQEEQISRLHKMLAPHLLR 518
+TGTPLQNNL EL+ L++FL F S E F E F+ + +Q+E + +LHK+L P LLR
Sbjct: 349 ITGTPLQNNLHELWALLNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLR 408
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTRRGGAQISLINVVMELRK 578
R+K DV K LPPKKE IL+V +S QK+YYKA+L ++ +++ GG + L+N+ M+LRK
Sbjct: 409 RLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVN-GGGERKRLLNIAMQLRK 467
Query: 579 LCCHPFMLEGVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLD 638
C HP++ +G EP P L+ ++GK+ LLDK++ KLK++ RVLI++Q +LD
Sbjct: 468 CCNHPYLFQGAEP--GPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLD 525
Query: 639 LLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADT 698
+LEDY Y+ + Y RIDG GG ER I+ +N S +F FLLSTRAGGLGINLATAD
Sbjct: 526 ILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 585
Query: 699 VIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTIXXXXXXXXXXXXVLEHLVV- 757
VI+YDSDWNP DLQA RAHR+GQ +V ++R T I L+ LV+
Sbjct: 586 VILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQ 645
Query: 758 -GRLKAQ-NINQEELDDIIRYGSKELFAEEN 786
GRL Q +N++EL ++RYG++ +F+ ++
Sbjct: 646 QGRLAEQKTVNKDELLQMVRYGAEMVFSSKD 676
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/511 (44%), Positives = 323/511 (63%), Gaps = 34/511 (6%)
Query: 284 GTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYK-EGIS-PHLVVAP 341
G L YQL GLN+L + + ILADEMGLGKT+Q+I+ LA L++ GI+ PH+VVAP
Sbjct: 192 GKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAP 251
Query: 342 LSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESK 401
STL NW E + P + V ++G+ + R IRE +G
Sbjct: 252 KSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE------------ELLVAG------- 292
Query: 402 QDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVL 461
KFD+ +TS+EM + T+L+ W +I+DE HR+KN++S L ++ +S+ +R+L
Sbjct: 293 ----KFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLL 348
Query: 462 LTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---DINQEEQISRLHKMLAPHLLR 518
+TGTPLQNNL EL+ L++FL F S E F E F+ + +Q+E + +LHK+L P LLR
Sbjct: 349 ITGTPLQNNLHELWALLNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLR 408
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTRRGGAQISLINVVMELRK 578
R+K DV K LPPKKE IL+V +S QK+YYKA+L ++ +++ GG + L+N+ M+LRK
Sbjct: 409 RLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVN-GGGERKRLLNIAMQLRK 467
Query: 579 LCCHPFMLEGVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLD 638
C HP++ +G EP P L+ ++GK+ LLDK++ KLK++ RVLI++Q +LD
Sbjct: 468 CCNHPYLFQGAEP--GPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLD 525
Query: 639 LLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADT 698
+LEDY Y+ + Y RIDG GG ER I+ +N S +F FLLSTRAGGLGINLATAD
Sbjct: 526 ILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 585
Query: 699 VIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTIXXXXXXXXXXXXVLEHLVV- 757
VI+YDSDWNP DLQA RAHR+GQ +V ++R T I L+ LV+
Sbjct: 586 VILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQ 645
Query: 758 -GRLKAQ-NINQEELDDIIRYGSKELFAEEN 786
GRL Q +N++EL ++RYG++ +F+ ++
Sbjct: 646 QGRLAEQKTVNKDELLQMVRYGAEMVFSSKD 676
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/476 (43%), Positives = 288/476 (60%), Gaps = 43/476 (9%)
Query: 278 PEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLY--KEGISP 335
P L GG L YQLEGL ++ ++ + ILADEMGLGKTIQ+IA +A L K+ P
Sbjct: 378 PSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDLHGP 437
Query: 336 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQ 395
HL++AP + L NWE EFA WAP ++ +Y GS + RT IR +
Sbjct: 438 HLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIR------------------AR 479
Query: 396 IVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSL-TQY 454
I KF+VL+T Y++I D LK I W MIVDEGHRLKN + L +L T Y
Sbjct: 480 IAGG------KFNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGY 533
Query: 455 SSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---------DINQEEQ- 504
+ R+LLTGTP+QN+L EL+ L++FL F S+ F+E F + EE+
Sbjct: 534 RIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEEL 593
Query: 505 --ISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTRR 562
I+RLH ++ P LLRR K +V K LP K ++IL+ ++S+ QK YYK + L
Sbjct: 594 LIINRLHHVIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSG 653
Query: 563 GGAQISLINVVMELRKLCCHPFMLEGVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKE 622
G SL N+ M+LRK C HP++ G + ++ E ++ +SGK +LLD+++ KLK+
Sbjct: 654 NGKSKSLQNLTMQLRKCCNHPYLFVGADYNMCKKPE----IVRASGKFELLDRLLPKLKK 709
Query: 623 QGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLL 682
GHR+L+++Q ++DLLE Y S ++Y R+DG +R I + +FN +S F FLL
Sbjct: 710 AGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLL 769
Query: 683 STRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTI 738
STRAGGLG+NL TADT+II+DSDWNP D QA RAHR+GQ +V ++ L++ G+I
Sbjct: 770 STRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSI 825
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 360 bits (924), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 209/524 (39%), Positives = 306/524 (58%), Gaps = 47/524 (8%)
Query: 278 PEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYK-EGI-SP 335
P L GG L YQLEGL ++ ++ + ILADEMGLGKTIQ+I+ +A L + +G+ P
Sbjct: 395 PSLLEGGELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVPGP 454
Query: 336 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQ 395
+L+VAP + L NW EFATW P + +Y G + R IRE +
Sbjct: 455 YLIVAPKAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIRE------------------K 496
Query: 396 IVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSL-TQY 454
I E K F+VL+T Y++I D LK I+W MIVDEGHRLKN +S L +L T Y
Sbjct: 497 IAGEGK-----FNVLITHYDLIMRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGY 551
Query: 455 SSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---------DINQEEQ- 504
+ R+LLTGTP+QN+L EL+ L++FL F S++ F+E F + EE+
Sbjct: 552 RIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSVQNFEEWFNAPFADRGNVSLTDEEEL 611
Query: 505 --ISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTRR 562
I RLH ++ P +LRR K +V K LP K ++IL+ ++S+ QK YYK + L
Sbjct: 612 LIIHRLHHVIRPFILRRKKDEVEKFLPGKTQVILKCDMSAWQKVYYKQVTDMGRVGLQTG 671
Query: 563 GGAQISLINVVMELRKLCCHPFMLEGVEPDIDDPKEFHKQLLESSGKLQLLDKMMVKLKE 622
G SL N+ M+LRK C HP++ G + ++ E ++ +SGK +LLD+++ KL++
Sbjct: 672 SGKSKSLQNLTMQLRKCCNHPYLFVGGDYNMWKKPE----IVRASGKFELLDRLLPKLRK 727
Query: 623 QGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLL 682
GHR+L+++Q ++D+LE Y + + Y R+DG +R + + +FN +S F FLL
Sbjct: 728 AGHRILLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFNEPDSPYFMFLL 787
Query: 683 STRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTIXXXX 742
STRAGGLG+NL TADTVII+DSDWNP D QA RAHR+GQ +V ++ L++ G++
Sbjct: 788 STRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVI 847
Query: 743 XXXXXXXXVLEHLVV--GRLKAQNINQ---EELDDIIRYGSKEL 781
++ V+ G + Q E L++I+R G+ L
Sbjct: 848 LERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEEIMRKGTSSL 891
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 347 bits (889), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 198/486 (40%), Positives = 274/486 (56%), Gaps = 53/486 (10%)
Query: 278 PEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLY--KEGISP 335
P L GG L YQ+ GL +L ++ + ILADEMGLGKT+Q I+ + L K P
Sbjct: 746 PSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGP 805
Query: 336 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGSA-QARTVIREYEFYFPXXXXXXXXXXSG 394
LVV P S L W+ E WAP ++ ++Y G+ + R + +E
Sbjct: 806 FLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKE------------------ 847
Query: 395 QIVSESKQDRIKFDVLLTSYE--MINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLT 452
QIV + KF+VLLT+YE M D L I W +I+DEGHR+KN KL + L
Sbjct: 848 QIVHQ------KFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLK 901
Query: 453 QYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQ-------- 504
Y S HR+LLTGTPLQNNL+EL+ L++FL F S E+F + F Q
Sbjct: 902 HYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEAL 961
Query: 505 ---------ISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRN 555
I+RLH++L P +LRR+K V ELP K E ++R E S+ Y K ++ R
Sbjct: 962 LSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASA----YQKLLMKRV 1017
Query: 556 YQLLTRRGGAQISLI-NVVMELRKLCCHPFMLEGVEPDIDD--PKEFHKQLLESSGKLQL 612
L G A+ + N VMELR +C HP++ + ++++ PK F ++ GKL++
Sbjct: 1018 EDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLCGKLEM 1077
Query: 613 LDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNA 672
LD+M+ KLK HRVL ++ +LD++EDY + K + Y R+DG+ G +R ID FN
Sbjct: 1078 LDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNK 1137
Query: 673 KNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRL 732
S F FLLS RAGG+G+NL ADTVI++D+DWNP DLQA ARAHR+GQ VL+ R
Sbjct: 1138 SGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRF 1197
Query: 733 ITRGTI 738
T ++
Sbjct: 1198 ETVNSV 1203
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 346 bits (888), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 198/486 (40%), Positives = 274/486 (56%), Gaps = 53/486 (10%)
Query: 278 PEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLY--KEGISP 335
P L GG L YQ+ GL +L ++ + ILADEMGLGKT+Q I+ + L K P
Sbjct: 746 PSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGP 805
Query: 336 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGSA-QARTVIREYEFYFPXXXXXXXXXXSG 394
LVV P S L W+ E WAP ++ ++Y G+ + R + +E
Sbjct: 806 FLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKE------------------ 847
Query: 395 QIVSESKQDRIKFDVLLTSYE--MINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLT 452
QIV + KF+VLLT+YE M D L I W +I+DEGHR+KN KL + L
Sbjct: 848 QIVHQ------KFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLK 901
Query: 453 QYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQ-------- 504
Y S HR+LLTGTPLQNNL+EL+ L++FL F S E+F + F Q
Sbjct: 902 HYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEAL 961
Query: 505 ---------ISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRN 555
I+RLH++L P +LRR+K V ELP K E ++R E S+ Y K ++ R
Sbjct: 962 LSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASA----YQKLLMKRV 1017
Query: 556 YQLLTRRGGAQISLI-NVVMELRKLCCHPFMLEGVEPDIDD--PKEFHKQLLESSGKLQL 612
L G A+ + N VMELR +C HP++ + ++++ PK F ++ GKL++
Sbjct: 1018 EDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLCGKLEM 1077
Query: 613 LDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNA 672
LD+M+ KLK HRVL ++ +LD++EDY + K + Y R+DG+ G +R ID FN
Sbjct: 1078 LDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNK 1137
Query: 673 KNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRL 732
S F FLLS RAGG+G+NL ADTVI++D+DWNP DLQA ARAHR+GQ VL+ R
Sbjct: 1138 SGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRF 1197
Query: 733 ITRGTI 738
T ++
Sbjct: 1198 ETVNSV 1203
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 346 bits (887), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 198/486 (40%), Positives = 274/486 (56%), Gaps = 53/486 (10%)
Query: 278 PEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLY--KEGISP 335
P L GG L YQ+ GL +L ++ + ILADEMGLGKT+Q I+ + L K P
Sbjct: 746 PSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGP 805
Query: 336 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGSA-QARTVIREYEFYFPXXXXXXXXXXSG 394
LVV P S L W+ E WAP ++ ++Y G+ + R + +E
Sbjct: 806 FLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKE------------------ 847
Query: 395 QIVSESKQDRIKFDVLLTSYE--MINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLT 452
QIV + KF+VLLT+YE M D L I W +I+DEGHR+KN KL + L
Sbjct: 848 QIVHQ------KFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLK 901
Query: 453 QYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQ-------- 504
Y S HR+LLTGTPLQNNL+EL+ L++FL F S E+F + F Q
Sbjct: 902 HYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEAL 961
Query: 505 ---------ISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRN 555
I+RLH++L P +LRR+K V ELP K E ++R E S+ Y K ++ R
Sbjct: 962 LSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASA----YQKLLMKRV 1017
Query: 556 YQLLTRRGGAQISLI-NVVMELRKLCCHPFMLEGVEPDIDD--PKEFHKQLLESSGKLQL 612
L G A+ + N VMELR +C HP++ + ++++ PK F ++ GKL++
Sbjct: 1018 EDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLCGKLEM 1077
Query: 613 LDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNA 672
LD+M+ KLK HRVL ++ +LD++EDY + K + Y R+DG+ G +R ID FN
Sbjct: 1078 LDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNK 1137
Query: 673 KNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRL 732
S F FLLS RAGG+G+NL ADTVI++D+DWNP DLQA ARAHR+GQ VL+ R
Sbjct: 1138 SGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRF 1197
Query: 733 ITRGTI 738
T ++
Sbjct: 1198 ETVNSV 1203
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 331 bits (848), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 203/559 (36%), Positives = 309/559 (55%), Gaps = 65/559 (11%)
Query: 273 QYENSP----EFLSGGTLHPYQLEGLNFLRFSWSKQTHVIL-ADEMGLGKTIQSIAFLAS 327
++ N+P EF TL P+Q+EG+++L + +V+L D+MGLGKT+Q+I+FL+
Sbjct: 34 KFSNTPPDCSEFGVTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSY 93
Query: 328 L-YKEGI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXX 385
L +++G+ P LV+ PLS W E + P + V+ YVG R +R+ +
Sbjct: 94 LKFRQGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMY------ 147
Query: 386 XXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDS 445
+ SK + FDVLLT+Y++ +D L I W+ I+DE RLKN +S
Sbjct: 148 --------DHVKKSSKGHFLPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNS 199
Query: 446 KLFSSLT-QYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDI----- 499
L++ L Q+ R+L+TGTP+QNNL EL+ LMHF FG+L++F FK+
Sbjct: 200 VLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKETGDGLS 259
Query: 500 -----NQEEQISRLHKMLAPHLLRRVKKDVMKE----LPPKKELILRVELSSKQKEYYKA 550
N +E L +L +LRR K +++ LPP EL + V L S QK+ Y +
Sbjct: 260 GLDVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTS 319
Query: 551 ILTR---NYQLLTRRGGAQISLINVVMELRKLCCHPFMLEGVEPDIDDPKEFHKQLLESS 607
IL + L+ G SL N+V++LRK C HP++ G+EP+ P E + L+++S
Sbjct: 320 ILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPE---PFEEGEHLVQAS 376
Query: 608 GKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRI 667
GKL +LD+++ +L + GHRVL+++Q LD+L+D+ +++ YER+DG V ER I
Sbjct: 377 GKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAI 436
Query: 668 DRFNAKN----------SSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMAR 717
F+AK S+ F F++STRAGG+G+NL ADTVI Y+ DWNP D QA+ R
Sbjct: 437 KNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQR 496
Query: 718 AHRLGQTNKVLIYRLITRGTIXXXXXXXXXXXXVLEHLVVGRLKAQNINQEELD------ 771
AHR+GQ + VL L+T ++ L H VVG N+ ++E D
Sbjct: 497 AHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVG----DNMEEKEEDGGDLRS 552
Query: 772 ---DIIRYGSKELFAEEND 787
+ R+ +E+ EE+D
Sbjct: 553 LVFGLQRFDPEEIHNEESD 571
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 330 bits (847), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 200/546 (36%), Positives = 305/546 (55%), Gaps = 58/546 (10%)
Query: 273 QYENSP----EFLSGGTLHPYQLEGLNFLRFSWSKQTHVIL-ADEMGLGKTIQSIAFLAS 327
++ N+P EF TL P+Q+EG+++L + +V+L D+MGLGKT+Q+I+FL+
Sbjct: 34 KFSNTPPDCSEFGVTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSY 93
Query: 328 L-YKEGI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXX 385
L +++G+ P LV+ PLS W E + P + V+ YVG R +R+ +
Sbjct: 94 LKFRQGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMY------ 147
Query: 386 XXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDS 445
G + FDVLLT+Y++ +D L I W+ I+DE RLKN +S
Sbjct: 148 ------DHGHF--------LPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNS 193
Query: 446 KLFSSLT-QYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDI----- 499
L++ L Q+ R+L+TGTP+QNNL EL+ LMHF FG+L++F FK+
Sbjct: 194 VLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKETGDGLD 253
Query: 500 --NQEEQISRLHKMLAPHLLRRVKKDVMKE----LPPKKELILRVELSSKQKEYYKAILT 553
N +E L +L +LRR K +++ LPP EL + V L S QK+ Y +IL
Sbjct: 254 VSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILR 313
Query: 554 R---NYQLLTRRGGAQISLINVVMELRKLCCHPFMLEGVEPDIDDPKEFHKQLLESSGKL 610
+ L+ G SL N+V++LRK C HP++ G+EP+ P E + L+++SGKL
Sbjct: 314 KELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPE---PFEEGEHLVQASGKL 370
Query: 611 QLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRF 670
+LD+++ +L + GHRVL+++Q LD+L+D+ +++ YER+DG V ER I F
Sbjct: 371 LVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNF 430
Query: 671 NAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIY 730
+ S+ F F++STRAGG+G+NL ADTVI Y+ DWNP D QA+ RAHR+GQ + VL
Sbjct: 431 SVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSI 490
Query: 731 RLITRGTIXXXXXXXXXXXXVLEHLVVGRLKAQNINQEELD---------DIIRYGSKEL 781
L+T ++ L H VVG N+ ++E D + R+ +E+
Sbjct: 491 NLVTEHSVEEVILRRAERKLQLSHNVVG----DNMEEKEEDGGDLRSLVFGLQRFDPEEI 546
Query: 782 FAEEND 787
EE+D
Sbjct: 547 HNEESD 552
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 319 bits (817), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 204/529 (38%), Positives = 299/529 (56%), Gaps = 51/529 (9%)
Query: 259 KDDGE-----LTKQQKEFQQYENSPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEM 313
K+DGE LT+++ + L+GG L YQL+G+ +L W + ILAD+M
Sbjct: 170 KEDGETINSDLTEEETVIKLQNELCPLLTGGQLKSYQLKGVKWLISLWQNGLNGILADQM 229
Query: 314 GLGKTIQSIAFLASLYKEGI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQART 372
GLGKTIQ+I FL+ L G+ P+LV+APLSTL NW E A + P +N ++Y G R
Sbjct: 230 GLGKTIQTIGFLSHLKGNGLDGPYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRD 289
Query: 373 VIREYEFYFPXXXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLDTTS-LKPIKWES 431
+R + P K KF +++TSYE+ D L+ W+
Sbjct: 290 ELRRK--HMP------------------KTVGPKFPIVITSYEVAMNDAKRILRHYPWKY 329
Query: 432 MIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEE 491
+++DEGHRLKN KL L +++LLTGTPLQNNL EL+ L++F+ F S +E
Sbjct: 330 VVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHDE 389
Query: 492 FQE--EFKDINQEEQ------------ISRLHKMLAPHLLRRVKKDVMKELPPKKELILR 537
F+ +F + N+ E +S+LH +L P +LRR+K DV LP KKE+I+
Sbjct: 390 FESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMKCDVELSLPRKKEIIMY 449
Query: 538 VELSSKQKEYYKAILTRNYQL-----LTRRGGAQISLINVVMELRKLCCHPFMLEGVEPD 592
++ QK++ + ++ + R G + L N+V++LRK C HP +L+G
Sbjct: 450 ATMTDHQKKFQEHLVNNTLEAHLGENAIRGQGWKGKLNNLVIQLRKNCNHPDLLQG---Q 506
Query: 593 IDDPKEFH--KQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWL 650
ID + ++++ GK +LL++++V+L H+VLI++Q+ +LD+++ Y S K +
Sbjct: 507 IDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHKVLIFSQWTKLLDIMDYYFSEKGFE 566
Query: 651 YERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 710
RIDG V ER+ +I F+ + SS FLLSTRAGGLGINL ADT I+YDSDWNP
Sbjct: 567 VCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQM 626
Query: 711 DLQAMARAHRLGQTNKVLIYRLITRGTIXXXXXXXXXXXXVLEHLVVGR 759
DLQAM R HR+GQT V +YRL T +I LEH+V+G+
Sbjct: 627 DLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLEHVVIGQ 675
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 294 bits (753), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 182/493 (36%), Positives = 266/493 (53%), Gaps = 74/493 (15%)
Query: 278 PEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL--YKEGISP 335
P L GTL YQL GL ++ ++ + + ILADEMGLGKT+Q +A +A L +K P
Sbjct: 973 PSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGP 1032
Query: 336 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQ 395
HL++ P + L NW+ E TW P ++ + YVG+ R+ + E
Sbjct: 1033 HLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEVCA-------------- 1078
Query: 396 IVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYS 455
+KF+VL+T+YE I D + L + W+ +I+DE R+K+++S L L +Y
Sbjct: 1079 ---------MKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYR 1129
Query: 456 SRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQ----------- 504
+ R+LLTGTPLQN+L EL+ L++ L F + + F + F Q+E
Sbjct: 1130 CQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLE 1189
Query: 505 -------ISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRN-- 555
I RLH++L P +LRR +DV LP K ++LR +S+ Q Y I
Sbjct: 1190 TEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTL 1249
Query: 556 ----------------YQLLTRRGGAQISLINVVMELRKLCCHPFMLEGVEPDIDD-PKE 598
YQ R +L N MELRK C HP + P +D K+
Sbjct: 1250 RVDPDDEKLRAQKNPIYQAKIYR-----TLNNRCMELRKACNHPLL---NYPYFNDFSKD 1301
Query: 599 FHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKV 658
F L+ S GKL +LD++++KL+ GHRVL+++ +LD+LE+Y +++ +Y RIDG
Sbjct: 1302 F---LVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTT 1358
Query: 659 GGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARA 718
+R+ I FN ++ F FLLS RA G G+NL TADTV+IYD D NP + QA+ARA
Sbjct: 1359 SLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARA 1418
Query: 719 HRLGQTNKV-LIY 730
HR+GQT +V +IY
Sbjct: 1419 HRIGQTREVKVIY 1431
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 293 bits (749), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 269/493 (54%), Gaps = 75/493 (15%)
Query: 278 PEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL--YKEGISP 335
P L GTL YQL GL ++ ++ + + ILADEMGLGKT+Q +A +A L +K P
Sbjct: 973 PSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGP 1032
Query: 336 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQ 395
HL++ P + L NW+ E TW P ++ + YVG+ R+ +
Sbjct: 1033 HLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRS----------------------K 1070
Query: 396 IVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYS 455
+ S+ K + KF+VL+T+YE I D + L + W+ +I+DE R+K+++S L L +Y
Sbjct: 1071 LFSQVKFE--KFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYR 1128
Query: 456 SRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQ----------- 504
+ R+LLTGTPLQN+L EL+ L++ L F + + F + F Q+E
Sbjct: 1129 CQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLE 1188
Query: 505 -------ISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRN-- 555
I RLH++L P +LRR +DV LP K ++LR +S+ Q Y I
Sbjct: 1189 TEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTL 1248
Query: 556 ----------------YQLLTRRGGAQISLINVVMELRKLCCHPFMLEGVEPDIDD-PKE 598
YQ R +L N MELRK C HP + P +D K+
Sbjct: 1249 RVDPDDEKLRAQKNPIYQAKIYR-----TLNNRCMELRKACNHPLL---NYPYFNDFSKD 1300
Query: 599 FHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKV 658
F L+ S GKL +LD++++KL+ GHRVL+++ +LD+LE+Y +++ +Y RIDG
Sbjct: 1301 F---LVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTT 1357
Query: 659 GGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARA 718
+R+ I FN ++ F FLLS RA G G+NL TADTV+IYD D NP + QA+ARA
Sbjct: 1358 SLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARA 1417
Query: 719 HRLGQTNKV-LIY 730
HR+GQT +V +IY
Sbjct: 1418 HRIGQTREVKVIY 1430
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 261 bits (668), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 168/485 (34%), Positives = 253/485 (52%), Gaps = 45/485 (9%)
Query: 286 LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL-YKEGISPHLVVAPLST 344
L YQ G+ +L ++ I+ DEMGLGKTIQ ++FL SL + + P +++ P++
Sbjct: 385 LFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGSLHFSKMYKPSIIICPVTL 444
Query: 345 LRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESKQDR 404
LR W RE W P +V + SAQ + S ++
Sbjct: 445 LRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKASESDYDSESSVDSDH--EPKSKNT 502
Query: 405 IKFD------------VLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLT 452
K+D +L+T+YE + L L I+W ++DEGHR++N +S +
Sbjct: 503 KKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNSDITLVCK 562
Query: 453 QYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK--------DINQEEQ 504
Q + HR+++TG P+QN L EL+ L F+ GK G L F+ EF Q
Sbjct: 563 QLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYANASPLQ 622
Query: 505 ISR-------LHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQ 557
+S L ++ P+LLRR+K DV L K E +L L+ +Q+ Y+A L + +
Sbjct: 623 VSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYRAFLA-SSE 681
Query: 558 LLTRRGGAQISLINVVMELRKLCCHPFMLE----GVEPDIDDPKEFHKQLLESSGKLQLL 613
+ G + SL + + +RK+C HP +LE PD +P E SGK++++
Sbjct: 682 VEQIFDGNRNSLYGIDV-MRKICNHPDLLEREHSHQNPDYGNP--------ERSGKMKVV 732
Query: 614 DKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAK 673
+++ K+QGHRVL+++Q Q MLD+LE + ++ Y R+DG +R ID FN
Sbjct: 733 AEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFN-N 791
Query: 674 NSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLI 733
+ F F+L+T+ GGLG NL A+ VII+D DWNP D+QA RA R+GQ V +YRLI
Sbjct: 792 SEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLI 851
Query: 734 TRGTI 738
TRGTI
Sbjct: 852 TRGTI 856
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 259 bits (662), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 261/527 (49%), Gaps = 96/527 (18%)
Query: 286 LHPYQLEGLNFLRFSWSKQTH-VILADEMGLGKTIQSIAFLASLYK--EGISPHLVVAPL 342
L PYQL G+NFL + K ILADEMGLGKTIQ+I +L L + PHLVV P
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 343 STLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESKQ 402
S L NWERE W P V+ Y G+A+A S ++ S SK
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHGAARA--------------------AYSRELNSLSKA 312
Query: 403 DRIK-FDVLLTSYEMINL-------DTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQY 454
+ F+VLL Y + D LK +W +++DE H LK+K+S + +L
Sbjct: 313 GKPPPFNVLLVCYSLFERHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSV 372
Query: 455 S--SRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHKML 512
+ + R++LTGTPLQN+L EL+ L+ F+ F + ++ + E I+R+ +L
Sbjct: 373 ARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTTENVDLKKLLNAEDTELITRMKSIL 432
Query: 513 APHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTRRGGAQIS---- 568
P +LRR+K DVM++L PK + + V + KQ++ YK + Y+ ++ ++S
Sbjct: 433 GPFILRRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAI-EEYRAASQARLVKLSSKSL 491
Query: 569 -----------LINVVMELRKLCCHPFMLEGVEPD------------------------- 592
+ N + RK+ HP ++ + D
Sbjct: 492 NSLAKALPKRQISNYFTQFRKIANHPLLIRRIYSDEDVIRIARKLHPIGAFGFECSLDRV 551
Query: 593 IDDPKEF-----HKQLLES----------------SGKLQLLDKMMVKLKEQGHRVLIYT 631
I++ K F H+ L + S K + L +++ +K+ GHRVLI++
Sbjct: 552 IEEVKGFNDFRIHQLLFQYGVNDTKGTLSDKHVMLSAKCRTLAELLPSMKKSGHRVLIFS 611
Query: 632 QFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGI 691
Q+ MLD+LE Y R+DG +RQ +D FN + S F LLSTRAGG G+
Sbjct: 612 QWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFN-NDKSIFACLLSTRAGGQGL 670
Query: 692 NLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTI 738
NL ADTVII+D D+NP D QA R HR+GQT V I+RL+T+ T+
Sbjct: 671 NLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTV 717
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 229 bits (585), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 159/517 (30%), Positives = 263/517 (50%), Gaps = 96/517 (18%)
Query: 286 LHPYQLEGLNFLRFSWSKQTHV---ILADEMGLGKTIQSIAFLASLYKEG-ISPHLVVAP 341
L+P+Q EGLN+L WS T IL D+MGLGKT+Q +FLA L+ I LVVAP
Sbjct: 377 LYPHQREGLNWL---WSLHTQGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKRALVVAP 433
Query: 342 LSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESK 401
+ L +W +E AT Y G++ T REY+ + + + K
Sbjct: 434 KTLLPHWMKELATVGLSQMTREYYGTS---TKAREYDLHH---------------ILQGK 475
Query: 402 QDRIKFDVLLTSYEMINLDTTSLKP------------IKWESMIVDEGHRLKNKDSKLFS 449
+LLT+Y+++ +T +L+ KW+ MI+DEGH +KN +++
Sbjct: 476 ------GILLTTYDIVRNNTKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAK 529
Query: 450 SLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK-------DINQE 502
SL + S HR++++GTP+QNNL EL+ L +F G G F++ ++ D N
Sbjct: 530 SLLEIPSSHRIIISGTPIQNNLKELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDKNAT 589
Query: 503 EQISRLHKMLA--------PHLLRRVKKDVM------KELPPKKELILRVELSSKQKEYY 548
++ R+ +A P LRR+K +V +L K E+++ + L++ Q++ Y
Sbjct: 590 DREQRIGSTVAKNLREHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLY 649
Query: 549 KAILTRNYQLLTRRGGAQISLINVVMELRKLCCHPFML---------EGVEPDID----- 594
+A L +L+ G+ ++ + + L+K+C HP +L EG++ +
Sbjct: 650 EAFLNSEI-VLSAFDGSPLAALTI---LKKICDHPLLLTKRAAEDVLEGMDSTLTQEEAG 705
Query: 595 -------------DPKEFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLE 641
D +F + S KL + ++ L +GHRVLI++Q + ML+L++
Sbjct: 706 VAERLAMHIADNVDTDDFQTKNDSISCKLSFIMSLLENLIPEGHRVLIFSQTRKMLNLIQ 765
Query: 642 DYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
D + + + RIDG +R ++ F + + FLL+++ GGLG+ L AD VI+
Sbjct: 766 DSLTSNGYSFLRIDGTTKAPDRLKTVEEFQEGHVAPI-FLLTSQVGGLGLTLTKADRVIV 824
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTI 738
D WNP D Q++ RA+R+GQT V++YRL+T T+
Sbjct: 825 VDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATV 861
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 217 bits (553), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 165/525 (31%), Positives = 250/525 (47%), Gaps = 101/525 (19%)
Query: 286 LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYKE--------GISPHL 337
L YQ EG+N+L F + H IL D+MGLGKT+Q+ A +AS E + P +
Sbjct: 1482 LRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPSI 1541
Query: 338 VVAPLSTLRNWEREFATWA--PQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQ 395
+V P + + +W E + ++V+ YVGSAQ R +RE +F
Sbjct: 1542 IVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLRE-QFN--------------- 1585
Query: 396 IVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYS 455
+V++TSY+++ D L W I+DEGH +KN SK+ +++ Q
Sbjct: 1586 ----------NHNVIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLK 1635
Query: 456 SRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF--------------KDINQ 501
++HR++L+GTP+QNN+ EL+ L FL G G+ +FQ + KD
Sbjct: 1636 AQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEA 1695
Query: 502 EE-QISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQ--- 557
+ LHK + P LLRR K++V+ +LP K +LS Q + Y+ + +
Sbjct: 1696 GVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEI 1755
Query: 558 --LLTRRGG------------AQISLINVVMELRKLCCHPFMLEG---VEPDIDD----- 595
++ G A + + L KLC HP ++ G EP D
Sbjct: 1756 SSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMI 1815
Query: 596 ------PKEFHKQLLESSGKLQLLDKMMVK-------------LKEQGHRVLIYTQFQHM 636
E HK ++ S KL L +++ + L HRVLI+ Q + +
Sbjct: 1816 NGCSDIITELHK--VQHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKAL 1873
Query: 637 LDLLED---YCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINL 693
LD++E K Y R+DG V +R + FN+ + + LL+T GGLG+NL
Sbjct: 1874 LDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNS-DPTIDVLLLTTHVGGLGLNL 1932
Query: 694 ATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTI 738
+ADT++ + DWNP D QAM RAHRLGQ V ++RLI RGT+
Sbjct: 1933 TSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMRGTL 1977
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 217 bits (552), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 165/525 (31%), Positives = 250/525 (47%), Gaps = 101/525 (19%)
Query: 286 LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYKE--------GISPHL 337
L YQ EG+N+L F + H IL D+MGLGKT+Q+ A +AS E + P +
Sbjct: 1451 LRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPSI 1510
Query: 338 VVAPLSTLRNWEREFATWA--PQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQ 395
+V P + + +W E + ++V+ YVGSAQ R +RE +F
Sbjct: 1511 IVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLRE-QFN--------------- 1554
Query: 396 IVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYS 455
+V++TSY+++ D L W I+DEGH +KN SK+ +++ Q
Sbjct: 1555 ----------NHNVIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLK 1604
Query: 456 SRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF--------------KDINQ 501
++HR++L+GTP+QNN+ EL+ L FL G G+ +FQ + KD
Sbjct: 1605 AQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEA 1664
Query: 502 EE-QISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQ--- 557
+ LHK + P LLRR K++V+ +LP K +LS Q + Y+ + +
Sbjct: 1665 GVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEI 1724
Query: 558 --LLTRRGG------------AQISLINVVMELRKLCCHPFMLEG---VEPDIDD----- 595
++ G A + + L KLC HP ++ G EP D
Sbjct: 1725 SSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMI 1784
Query: 596 ------PKEFHKQLLESSGKLQLLDKMMVK-------------LKEQGHRVLIYTQFQHM 636
E HK ++ S KL L +++ + L HRVLI+ Q + +
Sbjct: 1785 NGCSDIITELHK--VQHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKAL 1842
Query: 637 LDLLED---YCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINL 693
LD++E K Y R+DG V +R + FN+ + + LL+T GGLG+NL
Sbjct: 1843 LDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNS-DPTIDVLLLTTHVGGLGLNL 1901
Query: 694 ATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTI 738
+ADT++ + DWNP D QAM RAHRLGQ V ++RLI RGT+
Sbjct: 1902 TSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMRGTL 1946
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 216 bits (549), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/322 (39%), Positives = 183/322 (56%), Gaps = 37/322 (11%)
Query: 280 FLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLY-KEGI-SPHL 337
FL +L YQ GL++L + K+ + ILADEMGLGKTI +IA LA L +GI PHL
Sbjct: 530 FLLKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHL 589
Query: 338 VVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIV 397
+V P S + NWE EF W P ++ Y GSA+ R + R+ G +
Sbjct: 590 IVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQ-----------------GWMK 632
Query: 398 SESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSR 457
S F V +T+Y ++ D+ K KW+ +I+DE H +KN S+ + +L ++S+
Sbjct: 633 LNS------FHVCITTYRLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSK 686
Query: 458 HRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-----------KDINQEEQIS 506
R+LLTGTPLQN+L EL+ LMHFL F S +EF++ F + IN+ E I
Sbjct: 687 RRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINK-EVID 745
Query: 507 RLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTRRGGAQ 566
RLH +L P LLRR+K+DV K+LP K E ++ LS +Q+ Y+ + T G+
Sbjct: 746 RLHNVLRPFLLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDFIASTETQATLTSGSF 805
Query: 567 ISLINVVMELRKLCCHPFMLEG 588
+I+++M+LRK+C HP + EG
Sbjct: 806 FGMISIIMQLRKVCNHPDLFEG 827
Score = 149 bits (375), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 94/150 (62%), Gaps = 1/150 (0%)
Query: 608 GKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRI 667
GKLQ L ++ KLK GHR LI+TQ MLD+LE + + + Y R+DG ERQ +
Sbjct: 1075 GKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLM 1134
Query: 668 DRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 727
RFN N F F+LSTR+GG+GINL ADTVI YDSDWNP D QA R HR+GQT +V
Sbjct: 1135 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1193
Query: 728 LIYRLITRGTIXXXXXXXXXXXXVLEHLVV 757
IYRLI+ TI VL++LV+
Sbjct: 1194 HIYRLISESTIEENILKKANQKRVLDNLVI 1223
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 207 bits (526), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 141/509 (27%), Positives = 236/509 (46%), Gaps = 79/509 (15%)
Query: 286 LHPYQLEGLNFLRFSWSKQTH-------VILADEMGLGKTIQSIAFLASLYKEG------ 332
L P+Q EG+ F+ F H ILAD+MGLGKT+QSI L +L +G
Sbjct: 180 LRPHQREGVQFM-FDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPM 238
Query: 333 ISPHLVVAPLSTLRNWEREFATW-APQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXX 391
+ ++V P S + NWE E W ++ ++ S + + F P
Sbjct: 239 VKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRP--------- 289
Query: 392 XSGQIVSESKQDRIKFDVLLTSYEMINLDTTSL-KPIKWESMIVDEGHRLKNKDSKLFSS 450
R VL+ SYE + ++ + + +I DE HRLKN + +
Sbjct: 290 ------------RSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRA 337
Query: 451 LTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQ----------------E 494
L + + RVLL+GTP+QN+L+E F +++F + G G F+ E
Sbjct: 338 LASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATE 397
Query: 495 EFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKA-ILT 553
E K++ + + L + +LRR + LPPK ++ ++++ Q Y I +
Sbjct: 398 EEKNLAADRS-AELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISS 456
Query: 554 RNYQLLTRRGGAQISLINVVMELRKLCCHPFMLE-----------GVEPDIDD-PKEFHK 601
+N + Q ++ + L+KLC HP ++ G E ++ P E
Sbjct: 457 KNLKRALADNAKQTKVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFS 516
Query: 602 -----------QLLESSGKLQLLDKMMVKLKEQGH-RVLIYTQFQHMLDLLEDYCSYKKW 649
+E SGK+ +L +++ L+ + R+++ + + LDL C +++
Sbjct: 517 GRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRY 576
Query: 650 LYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPH 709
+ R+DG ++RQ ++R N F FLLS++AGG G+NL A+ ++++D DWNP
Sbjct: 577 PFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 636
Query: 710 ADLQAMARAHRLGQTNKVLIYRLITRGTI 738
D QA AR R GQ +V +YR ++ GTI
Sbjct: 637 NDKQAAARVWRDGQKKRVYVYRFLSTGTI 665
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 204 bits (520), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/508 (27%), Positives = 235/508 (46%), Gaps = 79/508 (15%)
Query: 286 LHPYQLEGLNFLRFSWSKQTH-------VILADEMGLGKTIQSIAFLASLYKEG------ 332
L P+Q EG+ F+ F H ILAD+MGLGKT+QSI L +L +G
Sbjct: 180 LRPHQREGVQFM-FDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPM 238
Query: 333 ISPHLVVAPLSTLRNWEREFATW-APQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXX 391
+ ++V P S + NWE E W ++ ++ S + + F P
Sbjct: 239 VKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRP--------- 289
Query: 392 XSGQIVSESKQDRIKFDVLLTSYEMINLDTTSL-KPIKWESMIVDEGHRLKNKDSKLFSS 450
R VL+ SYE + ++ + + +I DE HRLKN + +
Sbjct: 290 ------------RSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRA 337
Query: 451 LTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQ----------------E 494
L + + RVLL+GTP+QN+L+E F +++F + G G F+ E
Sbjct: 338 LASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATE 397
Query: 495 EFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTR 554
E K++ + + L + +LRR + LPPK ++ ++++ Q Y + +
Sbjct: 398 EEKNLAADRS-AELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQTTYNGCLCMQ 456
Query: 555 NYQLLTRRGGAQISLINVVMELRKLCCHPFMLE-----------GVEPDIDD-PKEFHK- 601
+ L Q ++ + L+KLC HP ++ G E ++ P E
Sbjct: 457 LKRALAD-NAKQTKVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSG 515
Query: 602 ----------QLLESSGKLQLLDKMMVKLKEQGH-RVLIYTQFQHMLDLLEDYCSYKKWL 650
+E SGK+ +L +++ L+ + R+++ + + LDL C +++
Sbjct: 516 RSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYP 575
Query: 651 YERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 710
+ R+DG ++RQ ++R N F FLLS++AGG G+NL A+ ++++D DWNP
Sbjct: 576 FLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPAN 635
Query: 711 DLQAMARAHRLGQTNKVLIYRLITRGTI 738
D QA AR R GQ +V +YR ++ GTI
Sbjct: 636 DKQAAARVWRDGQKKRVYVYRFLSTGTI 663
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 204 bits (518), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 191/332 (57%), Gaps = 41/332 (12%)
Query: 277 SPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYKEG--IS 334
+PE G TL YQ++GL +L + + + ILADEMGLGKTIQ++AFLA L +E
Sbjct: 578 TPELFKG-TLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 636
Query: 335 PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSG 394
P LVVAP S L NW E + + P + + Y G Q RT++R+
Sbjct: 637 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKN----------------- 679
Query: 395 QIVSESKQDR--IKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLT 452
++ + R F +L+TSY+++ D + +KW+ M++DE +K+ S + +L
Sbjct: 680 --INPKRMYRRDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLL 737
Query: 453 QYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-KDIN---------QE 502
++ R+R+LLTGTP+QNN+ EL+ L+HF+ F + ++F E F K I E
Sbjct: 738 SFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNE 797
Query: 503 EQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAI---LTRNYQLL 559
Q++RLH +L P +LRRVKKDV+ EL K E+ + +LSS+Q+ +Y+AI ++
Sbjct: 798 HQLNRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFD 857
Query: 560 TRRG----GAQISLINVVMELRKLCCHPFMLE 587
+ RG ++L+N+V++LRK+C HP + E
Sbjct: 858 SNRGQFTDKKVLNLMNIVIQLRKVCNHPELFE 889
Score = 154 bits (389), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 101/156 (64%), Gaps = 1/156 (0%)
Query: 602 QLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGA 661
+LL SGKLQ LD ++ +L+ HRVL++ Q ML++LEDY +Y+K+ Y R+DG
Sbjct: 1200 KLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIM 1259
Query: 662 ERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRL 721
+R+ + F + S F FLLSTRAGGLGINL ADTVI Y+SDWNP DLQAM RAHRL
Sbjct: 1260 DRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRL 1318
Query: 722 GQTNKVLIYRLITRGTIXXXXXXXXXXXXVLEHLVV 757
GQT V +YRLI + T+ ++ LV+
Sbjct: 1319 GQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVM 1354
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 193/346 (55%), Gaps = 36/346 (10%)
Query: 277 SPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYKEG--IS 334
+PE G TL YQ++GL +L + + + ILADEMGLGKTIQ++AFLA L +E
Sbjct: 578 TPELFKG-TLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 636
Query: 335 PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIRE-----YEFYFPXXXXXXX 389
P LVVAP S L NW E + + P + + Y G Q RT++R+ +F
Sbjct: 637 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRVMFFSTWIISFD 696
Query: 390 XXXSGQIVSESKQDRI-----------KFDVLLTSYEMINLDTTSLKPIKWESMIVDEGH 438
QI + + F +L+TSY+++ D + +KW+ M++DE
Sbjct: 697 PWAVRQICICKRACNVVRFQTLSDMDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQ 756
Query: 439 RLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-K 497
+K+ S + +L ++ R+R+LLTGTP+QNN+ EL+ L+HF+ F + ++F E F K
Sbjct: 757 AIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSK 816
Query: 498 DIN---------QEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY 548
I E Q++RLH +L P +LRRVKKDV+ EL K E+ + +LSS+Q+ +Y
Sbjct: 817 GIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFY 876
Query: 549 KAI---LTRNYQLLTRRG----GAQISLINVVMELRKLCCHPFMLE 587
+AI ++ + RG ++L+N+V++LRK+C HP + E
Sbjct: 877 QAIKNKISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELFE 922
Score = 154 bits (388), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 101/156 (64%), Gaps = 1/156 (0%)
Query: 602 QLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGA 661
+LL SGKLQ LD ++ +L+ HRVL++ Q ML++LEDY +Y+K+ Y R+DG
Sbjct: 1233 KLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIM 1292
Query: 662 ERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRL 721
+R+ + F + S F FLLSTRAGGLGINL ADTVI Y+SDWNP DLQAM RAHRL
Sbjct: 1293 DRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRL 1351
Query: 722 GQTNKVLIYRLITRGTIXXXXXXXXXXXXVLEHLVV 757
GQT V +YRLI + T+ ++ LV+
Sbjct: 1352 GQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVM 1387
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18
| chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 140 bits (353), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 209/484 (43%), Gaps = 66/484 (13%)
Query: 274 YENSPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLYKEGI 333
YE P + L P+Q EG+ F+ V+LADEMGLGKT+Q+IA + +
Sbjct: 161 YEKIPSHIEPKLL-PFQREGIEFI---LQHGGRVLLADEMGLGKTLQAIAVTTCVQESW- 215
Query: 334 SPHLVVAPLSTLRNWEREFATW--APQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXX 391
P L++AP S +W W P ++V+ +
Sbjct: 216 -PVLIIAPSSLRLHWATMIHQWLHVPPSDIVVVLPQPGGSN------------------K 256
Query: 392 XSGQIVSESKQDRIKFDVL--LTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFS 449
IVS + + I D + + SY+++ L + ++ +I DE H LKN +K S
Sbjct: 257 CGFTIVSSNTKGTIHLDGVFNIVSYDVVTKLDKLLMALDFKVVIADESHFLKNGQAKRTS 316
Query: 450 SLTQY--SSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEE------FKDINQ 501
+ +++ +LL+GTP + ELF + L + ++ E+ F
Sbjct: 317 ACLPVIKKAQYAILLSGTPALSRPIELFKQLEALYPDVYRNIHEYGGRYCKGGFFGTYQG 376
Query: 502 EEQISRLHKML-APHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLT 560
LH ++ A ++RR+KKDV+ ELP K+ + ++L++K + A+
Sbjct: 377 ASNHDELHNLMKATVMIRRLKKDVLTELPSKRRQQVFLDLAAKDMKQINALFHE------ 430
Query: 561 RRGGAQISLINVVMELRKLCCHPFMLEGVEPDIDDPKEFHKQLL------ESSGKLQLLD 614
+ VV K C E DI K K L+ + K+ +
Sbjct: 431 ---------LKVVKSKIKDCIS-------EDDIKSLKFIEKNLINKIYTDSAVAKIPAVL 474
Query: 615 KMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKN 674
+ + E G + L++ Q ML+ L + KK RIDG + RQ + F K+
Sbjct: 475 DYLENVIEAGCKFLVFAHHQSMLEELHQFLKKKKVGCIRIDGSTPASSRQALVSDFQDKD 534
Query: 675 SSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLIT 734
+ +LS RA G+GI L A TVI + W P +QA RAHR+GQ + V I+ L+
Sbjct: 535 EIKAA-VLSIRAAGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLA 593
Query: 735 RGTI 738
T+
Sbjct: 594 NDTV 597
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 142/293 (48%), Gaps = 56/293 (19%)
Query: 289 YQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLY-KEGIS-----------PH 336
+Q EG+ F+ + IL D+MGLGKTIQ+IAFLA++Y K+G + P
Sbjct: 142 HQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCLLESDKGPV 201
Query: 337 LVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQI 396
L++ P S + NWE EF+ WA V +Y GS R +I E
Sbjct: 202 LIICPSSIIHNWESEFSRWASFFKVSVYHGSN--RDMILE-------------------- 239
Query: 397 VSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSS 456
K +VL+TS++ + L I WE +I DE HRLKN+ SKL+ + + +
Sbjct: 240 ----KLKARGVEVLVTSFDTFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKT 295
Query: 457 RHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQ----------------EEFKDIN 500
+ R+ LTGT +QN + ELF L ++ G G+ E F+ E F I
Sbjct: 296 KKRIGLTGTVMQNKISELFNLFEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIA 355
Query: 501 QEEQISRLHKMLAPHLLRRVKKDVMKELPPKKE-LILRVELSSKQKEYYKAIL 552
+ + L +L ++LRR K++ + L KE ++ ++S Q+ Y+ ++
Sbjct: 356 DKRK-QHLGSLLRKYMLRRTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMI 407
Score = 114 bits (285), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
Query: 604 LESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAER 663
++ GK++ L+K+M +G ++L+++ MLD+LE + K + + R+DG R
Sbjct: 524 VKHCGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLR 583
Query: 664 QIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQ 723
Q +D FNA + S+ FL+ST+AGGLG+NL +A+ V+I+D +WNP DLQA R+ R GQ
Sbjct: 584 QSLVDDFNA-SPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQ 642
Query: 724 TNKVLIYRLITRGTI 738
V+++RL++ G++
Sbjct: 643 KRHVVVFRLLSAGSL 657
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 136/498 (27%), Positives = 218/498 (43%), Gaps = 57/498 (11%)
Query: 285 TLHPYQLEGLNFLRFSWSKQTHV--------------ILADEMGLGKTIQSIAFLASLYK 330
TL+P+Q EG F+ + + T + I++ + G GKT ++ FL S K
Sbjct: 576 TLYPHQQEGFEFIWKNLAGTTKINELNSVGVKGSGGCIISHKAGTGKTRLTVVFLQSYLK 635
Query: 331 EGISPH-LVVAPLSTLRNWEREFATWAPQ-----MNVVMYVGSAQARTVIREYEFYFPXX 384
+ H +V+AP + +R WE E W MN + G A V R
Sbjct: 636 RFPNSHPMVIAPATLMRTWEDEVRKWNVNIPFYNMNSLQLSGYEDAEAVSR------LEG 689
Query: 385 XXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMI--NLDTTSLKPIKW------ESMIVDE 436
++VS KQ I + YE + N +T ++ + +++DE
Sbjct: 690 NRHHNSIRMVKLVSWWKQKSI-LGISYPLYEKLAANKNTEGMQVFRRMLVELPGLLVLDE 748
Query: 437 GHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDEL---FMLMHFLDAGKFGS-LEEF 492
GH +N+ S ++ LT+ + R+ L+GT QNN EL L D S + E
Sbjct: 749 GHTPRNQSSLIWKVLTEVRTEKRIFLSGTLFQNNFKELSNVLCLARPADKDTISSRIHEL 808
Query: 493 QE-----EFKDINQEEQISRLHKMLAPHLLRRVKKDVMKE-LPPKKELILRVELSSKQKE 546
+ E +N+E +I L M+A H + + +++E LP ++ ++ + +QK+
Sbjct: 809 SKCSQEGEHGRVNEENRIVDLKAMIA-HFVHVHEGTILQESLPGLRDCVVVLNPPFQQKK 867
Query: 547 YYKAILTRNYQLLTRRGGAQISLINVVMELRKLCCHPFMLEG--VEPDIDDPKEFHKQLL 604
I T T ++S ++V L LCC+P E + P + +
Sbjct: 868 ILDRIDTSQN---TFEFEHKLSAVSVHPSLY-LCCNPTKKEDLVIGPATLGTLKRLRLKY 923
Query: 605 ESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDL-LEDYCSYKKWLY-ERI---DGKVG 659
E K + L + +VL+Y+Q+ L L +E + W E+I GKV
Sbjct: 924 EEGVKTKFLIDFIRISGTVKEKVLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVE 983
Query: 660 GAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAH 719
+RQ ID FN +S L ST+A GI+L A V+I D WNP + QA++RA
Sbjct: 984 QRDRQHMIDNFNKPDSGSKVLLASTKACSEGISLVGASRVVILDVVWNPSVESQAISRAF 1043
Query: 720 RLGQTNKVLIYRLITRGT 737
R+GQ V IY L+ + T
Sbjct: 1044 RIGQKRAVFIYHLMVKDT 1061
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 127/513 (24%), Positives = 216/513 (42%), Gaps = 91/513 (17%)
Query: 286 LHPYQLEGLNFL--RFSWSKQTHVILADEMGLGKTIQSIAFLASLYKEGISPH---LVVA 340
+ P+Q EG FL + + ILA G GKT I+FL S + P LVV
Sbjct: 265 MRPHQTEGFRFLCNNLAADEPGGCILAHAPGSGKTFLLISFLQSFM--AMDPQARPLVVL 322
Query: 341 PLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSES 400
P + +W+REF W + ++ S +A + ++ + Q +
Sbjct: 323 PKGIIESWKREFTLWEVEKIPLLDFYSVKAESRKQQLKVLGQWIKERSILFLGYQQFTRI 382
Query: 401 KQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRV 460
D F+ ++I L+ +L +I+DEGH +NK++ + SSL + +R +V
Sbjct: 383 ICDD-NFEAASEDCKLILLEKPTL-------LILDEGHTSRNKETYMLSSLARVKTRRKV 434
Query: 461 LLTGTPLQNNLDELFMLMHF------------------------------------LDAG 484
+LTGT QNN++E+F ++ ++
Sbjct: 435 VLTGTLFQNNVEEVFNILDLVRPKFLKRPGTREIVSRIMSKAEIPRGKQVNQSSSSIEGT 494
Query: 485 KFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQ 544
F ++E + + + + + + + + ++L K D LP E + + LSS Q
Sbjct: 495 FFAAVELTLQRSTNFSAKASLIKDLREMTRNILHYHKADFSGLLPGLSEFTVMLNLSSIQ 554
Query: 545 KEYYKAILTRNYQLLTRRGGAQISLINVVMELRKLCCHPFMLEGVEPDIDDPKEFHKQLL 604
++ K + R +L QISL L HP + +E ++P K
Sbjct: 555 RDEVKGL--RKMELF-----KQISLGAA------LYIHPKLKSFLE---ENPSNGEKGFS 598
Query: 605 ESSGKLQLLDKMM--------VKLK----------EQGHRVLIYTQFQHMLDLLED-YCS 645
+++ + LDKM+ VK+K G ++L+++Q+ + LE S
Sbjct: 599 DNNTTVMKLDKMLKKINVRDGVKMKFFLNLLALCESTGEKLLVFSQYIVPIKTLERLMSS 658
Query: 646 YKKWLYER----IDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
K W + I G +R+ ++RFN ++ F S +A G GI+L A V+I
Sbjct: 659 MKGWRLGKEMFTITGDSSNEQREWSMERFNNSLEAK-VFFGSIKACGEGISLVGASRVLI 717
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVLIYRLIT 734
D NP QA+ARA+R GQ KV Y+L+
Sbjct: 718 LDVHLNPSVTQQAVARAYRPGQKRKVYAYKLVA 750
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 114 bits (284), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 96/178 (53%), Gaps = 14/178 (7%)
Query: 607 SGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSY--------KKWL----YERI 654
SGK+ LL ++ + G + L+++Q LDL+E Y S K W + RI
Sbjct: 1093 SGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRI 1152
Query: 655 DGKVGGAERQIRIDRFNAKNSSRF-CFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQ 713
DGK +ERQ +DRFN ++ R C L+STRAG LGINL A+ VII D WNP DLQ
Sbjct: 1153 DGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQ 1212
Query: 714 AMARAHRLGQTNKVLIYRLITRGTIXXXXXXXXXXXXVLEHLVVGRLKA-QNINQEEL 770
A+ RA R GQ V YRL+ RGTI L VV R + + I++EE+
Sbjct: 1213 AIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1270
Score = 97.8 bits (242), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 128/304 (42%), Gaps = 73/304 (24%)
Query: 286 LHPYQLEGLNFLRFSWS-------------KQTHVILADEMGLGKTIQSIAFLASLYK-- 330
L +Q+ G+ RF W K ILA MGLGKT Q IAFL + +
Sbjct: 719 LKVHQVTGI---RFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCV 775
Query: 331 -EGISPHLVVAPLSTLRNWEREFATWAPQ----MNVVMYVGSAQARTVIREYEFYFPXXX 385
G+ L+V P++ L NW EF W P + + M +G + Y+F++
Sbjct: 776 DLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFM-LGD------VSRYKFFYERNF 828
Query: 386 XXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDS 445
+ + + + +D D+L + DE H +KN +
Sbjct: 829 WGVKDLNAARGICNALRD--GPDIL----------------------VCDEAHIIKNTKA 864
Query: 446 KLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD------- 498
+L Q + R+ LTG+PLQNNL E + ++ F+ G GS EF+ F++
Sbjct: 865 DTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQH 924
Query: 499 ----------INQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY 548
+NQ I L++ L + R V K+LPPK ++ V+LS Q+ Y
Sbjct: 925 MNSTAEDVKIMNQRSHI--LYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILY 982
Query: 549 KAIL 552
+ L
Sbjct: 983 QRFL 986
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 114 bits (284), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 96/178 (53%), Gaps = 14/178 (7%)
Query: 607 SGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSY--------KKWL----YERI 654
SGK+ LL ++ + G + L+++Q LDL+E Y S K W + RI
Sbjct: 1114 SGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRI 1173
Query: 655 DGKVGGAERQIRIDRFNAKNSSRF-CFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQ 713
DGK +ERQ +DRFN ++ R C L+STRAG LGINL A+ VII D WNP DLQ
Sbjct: 1174 DGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQ 1233
Query: 714 AMARAHRLGQTNKVLIYRLITRGTIXXXXXXXXXXXXVLEHLVVGRLKA-QNINQEEL 770
A+ RA R GQ V YRL+ RGTI L VV R + + I++EE+
Sbjct: 1234 AIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1291
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 128/309 (41%), Gaps = 62/309 (20%)
Query: 286 LHPYQLEGLNFLRFSWS-------------KQTHVILADEMGLGKTIQSIAFLASLYK-- 330
L +Q+ G+ RF W K ILA MGLGKT Q IAFL + +
Sbjct: 719 LKVHQVTGI---RFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCV 775
Query: 331 -EGISPHLVVAPLSTLRNWEREFATWAPQ----MNVVMYVGSAQAR-----TVIREYEFY 380
G+ L+V P++ L NW EF W P + + M ++ R T R+
Sbjct: 776 DLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKGGV 835
Query: 381 FPXXXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRL 440
F G+ V + R + L ++ ++ DE H +
Sbjct: 836 FLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDI---------------LVCDEAHII 880
Query: 441 KNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD-- 498
KN + +L Q + R+ LTG+PLQNNL E + ++ F+ G GS EF+ F++
Sbjct: 881 KNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPI 940
Query: 499 ---------------INQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSK 543
+NQ I L++ L + R V K+LPPK ++ V+LS
Sbjct: 941 ENGQHMNSTAEDVKIMNQRSHI--LYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPL 998
Query: 544 QKEYYKAIL 552
Q+ Y+ L
Sbjct: 999 QRILYQRFL 1007
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 114 bits (284), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 96/178 (53%), Gaps = 14/178 (7%)
Query: 607 SGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSY--------KKWL----YERI 654
SGK+ LL ++ + G + L+++Q LDL+E Y S K W + RI
Sbjct: 1114 SGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRI 1173
Query: 655 DGKVGGAERQIRIDRFNAKNSSRF-CFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQ 713
DGK +ERQ +DRFN ++ R C L+STRAG LGINL A+ VII D WNP DLQ
Sbjct: 1174 DGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQ 1233
Query: 714 AMARAHRLGQTNKVLIYRLITRGTIXXXXXXXXXXXXVLEHLVVGRLKA-QNINQEEL 770
A+ RA R GQ V YRL+ RGTI L VV R + + I++EE+
Sbjct: 1234 AIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1291
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 128/309 (41%), Gaps = 62/309 (20%)
Query: 286 LHPYQLEGLNFLRFSWS-------------KQTHVILADEMGLGKTIQSIAFLASLYK-- 330
L +Q+ G+ RF W K ILA MGLGKT Q IAFL + +
Sbjct: 719 LKVHQVTGI---RFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCV 775
Query: 331 -EGISPHLVVAPLSTLRNWEREFATWAPQ----MNVVMYVGSAQAR-----TVIREYEFY 380
G+ L+V P++ L NW EF W P + + M ++ R T R+
Sbjct: 776 DLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKGGV 835
Query: 381 FPXXXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRL 440
F G+ V + R + L ++ ++ DE H +
Sbjct: 836 FLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDI---------------LVCDEAHII 880
Query: 441 KNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD-- 498
KN + +L Q + R+ LTG+PLQNNL E + ++ F+ G GS EF+ F++
Sbjct: 881 KNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPI 940
Query: 499 ---------------INQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSK 543
+NQ I L++ L + R V K+LPPK ++ V+LS
Sbjct: 941 ENGQHMNSTAEDVKIMNQRSHI--LYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPL 998
Query: 544 QKEYYKAIL 552
Q+ Y+ L
Sbjct: 999 QRILYQRFL 1007
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 114 bits (284), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 96/178 (53%), Gaps = 14/178 (7%)
Query: 607 SGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSY--------KKWL----YERI 654
SGK+ LL ++ + G + L+++Q LDL+E Y S K W + RI
Sbjct: 1114 SGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRI 1173
Query: 655 DGKVGGAERQIRIDRFNAKNSSRF-CFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQ 713
DGK +ERQ +DRFN ++ R C L+STRAG LGINL A+ VII D WNP DLQ
Sbjct: 1174 DGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQ 1233
Query: 714 AMARAHRLGQTNKVLIYRLITRGTIXXXXXXXXXXXXVLEHLVVGRLKA-QNINQEEL 770
A+ RA R GQ V YRL+ RGTI L VV R + + I++EE+
Sbjct: 1234 AIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1291
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 128/309 (41%), Gaps = 62/309 (20%)
Query: 286 LHPYQLEGLNFLRFSWS-------------KQTHVILADEMGLGKTIQSIAFLASLYK-- 330
L +Q+ G+ RF W K ILA MGLGKT Q IAFL + +
Sbjct: 719 LKVHQVTGI---RFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCV 775
Query: 331 -EGISPHLVVAPLSTLRNWEREFATWAPQ----MNVVMYVGSAQAR-----TVIREYEFY 380
G+ L+V P++ L NW EF W P + + M ++ R T R+
Sbjct: 776 DLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKGGV 835
Query: 381 FPXXXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRL 440
F G+ V + R + L ++ ++ DE H +
Sbjct: 836 FLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDI---------------LVCDEAHII 880
Query: 441 KNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD-- 498
KN + +L Q + R+ LTG+PLQNNL E + ++ F+ G GS EF+ F++
Sbjct: 881 KNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPI 940
Query: 499 ---------------INQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSK 543
+NQ I L++ L + R V K+LPPK ++ V+LS
Sbjct: 941 ENGQHMNSTAEDVKIMNQRSHI--LYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPL 998
Query: 544 QKEYYKAIL 552
Q+ Y+ L
Sbjct: 999 QRILYQRFL 1007
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/508 (23%), Positives = 203/508 (39%), Gaps = 92/508 (18%)
Query: 286 LHPYQLEGLNFL--RFSWSKQTHVILADEMGLGKTIQSIAFLAS-LYKEGISPHLVVAPL 342
+ P+Q+EG FL I+A G GKT I+F+ S L K + LVV P
Sbjct: 350 MKPHQIEGFQFLCSNLVADDPGGCIMAHAPGSGKTFMIISFMQSFLAKYPQAKPLVVLPK 409
Query: 343 STLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXSGQIVSESKQ 402
L W++EF W + ++ SA+A Q +S KQ
Sbjct: 410 GILPTWKKEFVRWQVEDIPLLDFYSAKAEN--------------------RAQQLSILKQ 449
Query: 403 DRIKFDVLLTSYEMINL-------DTTSLKPIKWES---MIVDEGHRLKNKDSKLFSSLT 452
K +L Y+ + D+ S + I + +I+DEGH +N+D+ L SL
Sbjct: 450 WMEKKSILFLGYQQFSTIVCDDTTDSLSCQEILLKVPSILILDEGHTPRNEDTNLLQSLA 509
Query: 453 QYSSRHRVLLTGTPLQNNLDELFMLMHF-------LDAGKFG------------------ 487
Q + +V+L+GT QN++ E+F +++ LD K
Sbjct: 510 QVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLDTSKSAVKRILAYTPCDVRGRLTG 569
Query: 488 -----------SLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELIL 536
++E ++ +D + ++ + + + +L K D + ELP + +
Sbjct: 570 SNSDMASMFNETVEHTLQKSEDFTVKIKVIQDLREMTKKVLHYYKGDFLDELPGLADFTV 629
Query: 537 RVELSSKQKEYYKAILTRNYQLLTRRGGAQISLINVVMELRKLCCHPFM--LEGVEPDID 594
+ LS KQ K + + G+ I L HP + D+
Sbjct: 630 VLNLSPKQLNEVKKLRREKRKFKVSAVGSAIYL------------HPKLKVFSDKSDDVS 677
Query: 595 DPK--EFHKQL-LESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKK-WL 650
D E ++L L K + ++ G ++L+++Q+ L LE + K W
Sbjct: 678 DTTMDEMVEKLDLNEGVKAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLERLAALAKGWK 737
Query: 651 YER----IDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
+ + G +R+ ++ FN+ ++ F S +A G GI+L A ++I D
Sbjct: 738 LGKEVFVLTGNTSSEQREWSMETFNSSPDAKI-FFGSIKACGEGISLVGASRILILDVPL 796
Query: 707 NPHADLQAMARAHRLGQTNKVLIYRLIT 734
NP QA+ RA R GQ V YRLI
Sbjct: 797 NPSVTRQAIGRAFRPGQKKMVHAYRLIA 824
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 160/375 (42%), Gaps = 89/375 (23%)
Query: 308 ILADEMGLGKTIQSIAFL-----------------------ASLYKEGISP--------- 335
ILAD MGLGKT+ +I+ L +S + SP
Sbjct: 416 ILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFLG 475
Query: 336 ----------------HLVVAPLSTLRNWEREFATWAPQMNVVMYVGSAQARTVIREYEF 379
+L+V P++ L W+ E A ++ +YV Q+R
Sbjct: 476 FDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRP------- 528
Query: 380 YFPXXXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMIN-LDTTSLKPIKWESMIVDEGH 438
+++S+S + VL + + N D + ++W +++DE H
Sbjct: 529 ------------KDAKLLSQSDVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAH 576
Query: 439 RLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEF----QE 494
+KN S++ + + R LTGTP+QNNL++L+ L+ FL +G+ + Q+
Sbjct: 577 TIKNSKSQISLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQK 636
Query: 495 EFKDINQEEQISRLHKMLAPHLLRRVKKDVMKE------LPPKKELILRVELSSKQKEYY 548
F++ E + + +L P +LRR K +E LPP ++ ELS ++++Y
Sbjct: 637 PFEE-GDERGLKLVQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFY 695
Query: 549 KAILTRN---YQLLTRRGGA---QISLINVVMELRKLCCHPFML--EGVEPDIDDPKEFH 600
A+ R+ + +G S++ +++ LR+ C HPF++ G + D +
Sbjct: 696 DALFKRSKVKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLS 755
Query: 601 KQLLESSGKLQLLDK 615
K+ L SGK L++
Sbjct: 756 KRFL--SGKSSGLER 768
Score = 90.5 bits (223), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 598 EFHKQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGK 657
+ K +ESS LL+++ L+ G + ++++Q+ LDLL+ S + + R+DG
Sbjct: 854 DVEKNWVESSKITALLEELE-GLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGT 912
Query: 658 VGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMAR 717
+ +R+ + F +++ S L+S +AGG+GINL A + D WNP + QA+ R
Sbjct: 913 LSQQQREKVLKEF-SEDGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMR 971
Query: 718 AHRLGQTNKVLIYRLITRGTI 738
HR+GQT +V I R I +GT+
Sbjct: 972 IHRIGQTKEVKIRRFIVKGTV 992
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 154/344 (44%), Gaps = 56/344 (16%)
Query: 432 MIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEE 491
+++DE H +N+ S ++ +L++ ++ R+LL+GTP QNN EL + L + LE
Sbjct: 1008 LVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNFLEL---CNVLGLARPKYLER 1064
Query: 492 FQEEFK----------------DINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELI 535
K +IN I L ++ P + + LP +E +
Sbjct: 1065 LTSTLKKSGMTVTKRGKKNLGNEINNR-GIEELKAVMLPFVHVHKGSILQSSLPGLRECV 1123
Query: 536 LRVELSSKQKEYYKAI-LTRNYQLLTR-RGGAQISLINVVMELRKLCCHPFMLEGVEPDI 593
+ + Q+ ++I +T N + ++SL++V HP ++ +
Sbjct: 1124 VVLNPPELQRRVLESIEVTHNRKTKNVFETEHKLSLVSV---------HPSLVSRCKISE 1174
Query: 594 DDPKEFHKQLLESSGKLQLLDKMMVK-------------LKEQGHRVLIYTQFQHMLDLL 640
+ + LL K++L VK +KE +VL+++Q+ L L+
Sbjct: 1175 KERLSIDEALLAQLKKVRLDPNQSVKTRFLMEFVELCEVIKE---KVLVFSQYIDPLKLI 1231
Query: 641 EDY-CSYKKW------LYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINL 693
+ S KW LY + GK+ +RQ I+ FN S FL ST+A GI+L
Sbjct: 1232 MKHLVSRFKWNPGEEVLY--MHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISL 1289
Query: 694 ATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGT 737
A VI+ D WNP + QA++RA+R+GQ V Y L+ +GT
Sbjct: 1290 VGASRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGT 1333
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Query: 607 SGKLQLLDKMMVKLKEQG--HRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQ 664
S K+ L K + K+K+ G + ++++Q+ LDLLE + + + R DGK+ R+
Sbjct: 1108 SSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGRE 1167
Query: 665 IRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQT 724
+ FN + + L+S +AGG+G+NL A +V + D WNP + QA+ R HR+GQ
Sbjct: 1168 KVLKEFN-ETKQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQK 1226
Query: 725 NKVLIYRLITRGTI 738
V + R I + T+
Sbjct: 1227 RTVFVRRFIVKDTV 1240
Score = 83.6 bits (205), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 145/335 (43%), Gaps = 86/335 (25%)
Query: 308 ILADEMGLGKTIQSIAFLASLYKEGISPH------------------------------- 336
ILAD MGLGKT+ +IA + + G +P
Sbjct: 684 ILADAMGLGKTVMTIALILARPGRG-NPENEDVLVADVNADKRNRKEIHMALTTVKAKGG 742
Query: 337 -LVVAPLSTLRNWEREFATWAP--QMNVVMYVGSAQARTVIREYEFYFPXXXXXXXXXXS 393
L++ P++ L W+ E T + ++V++Y G + +
Sbjct: 743 TLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTH--------------------DA 782
Query: 394 GQIVSESKQDRIKFDVLLTSYEMI------NLDTTSLKPIKWESMIVDEGHRLKNKDSKL 447
I S DV+LT+Y ++ ++ + I W +++DE H +K+ ++
Sbjct: 783 KAIASH--------DVVLTTYGVLTSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQA 834
Query: 448 FSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSL----EEFQEEFKDINQEE 503
+ + SS R LTGTPLQN L++L+ L+ FL + + + Q+ +++
Sbjct: 835 AKATFELSSHCRWCLTGTPLQNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYEN-GDPR 893
Query: 504 QISRLHKMLAPHLLRRVKK------DVMKELPPKKELILRVELSSKQKEYYKAILTRN-- 555
+ + +L P +LRR K+ ++ ELPP ++ E S ++++Y A+ R+
Sbjct: 894 GLKLIKAILRPLMLRRTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKV 953
Query: 556 -YQLLTRRGGA---QISLINVVMELRKLCCHPFML 586
+ +G +++ +++ LR+ C HPF++
Sbjct: 954 QFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLV 988
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 139/344 (40%), Gaps = 96/344 (27%)
Query: 308 ILADEMGLGKTIQSIAFLA-------------------------------------SLYK 330
ILAD+ GLGKT+ +IA + SL K
Sbjct: 567 ILADDQGLGKTVSTIALILTERSTPYLPCEEDSKNGGCNQSDHSQVVFNENKVVEDSLCK 626
Query: 331 EGISPH---LVVAPLSTLRNWEREF---ATWAPQMNVVMYVGSAQARTVIREYEFYFPXX 384
P L+V P S +R W E T ++V++Y G ++ +
Sbjct: 627 MRGRPAAGTLIVCPTSLMRQWADELRKKVTLEAHLSVLVYHGCSRTK------------- 673
Query: 385 XXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMI----NLD-------TTSLKPIKWESMI 433
+ K+DV++T+Y ++ ++D + L + W ++
Sbjct: 674 ---------------DPHELAKYDVVITTYSLVSKRKHMDCEPVEFLSGPLAQVSWFRVV 718
Query: 434 VDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQ 493
+DE +KN ++ + + ++ R L+GTP+QN++ +L+ FL + S + F
Sbjct: 719 LDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLKYDPYSSYQTFC 778
Query: 494 EEFKDINQE---EQISRLHKMLAPHLLRRVKKDVMK-----ELPPKKELILRVELSSKQK 545
E K+ E L +L +LRR K ++ LPPK + RV+ + +++
Sbjct: 779 ETIKNPISSYPGEGYKTLQAILKKVMLRRTKDTLLDGKPVISLPPKSIELRRVDFTKEER 838
Query: 546 EYYKAILTRN---YQLLTRRGGAQISLINV---VMELRKLCCHP 583
++Y + + ++ G + + +N+ ++ LR+ C HP
Sbjct: 839 DFYSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQACGHP 882
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 624 GHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLS 683
G + +++TQ+ MLDLLE Y R DGK+ R + FN ++S
Sbjct: 1071 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSV-MIMS 1129
Query: 684 TRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTI 738
+A LG+N+ A VI+ D WNP + QA+ RAHR+GQT V + R + T+
Sbjct: 1130 LKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTV 1184
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 132/312 (42%), Gaps = 60/312 (19%)
Query: 267 QQKEFQQYENSPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLA 326
++K Q E P L L P+QL+GL RF + +ADEMGLGKT+Q+IA
Sbjct: 186 EEKVEQLIETLPRKLVNALL-PFQLDGL---RFGLRRGGRCFIADEMGLGKTLQAIAIAG 241
Query: 327 SLYKEGISPHLVVAPLSTLRNWEREFATWAPQM---NVVMYVGSAQARTVIREYEFYFPX 383
EG LVV P W E W P +V + G ++ Y P
Sbjct: 242 CFISEG--SILVVCPAVLRFTWAEELERWLPSCLPSDVHLVFGH-------QDNPAYLPR 292
Query: 384 XXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRL--- 440
V++ SY+M+ T++ +W +IVDE H L
Sbjct: 293 WPK----------------------VVVISYKMLQHLRTTMLEREWALLIVDESHHLRCS 330
Query: 441 -KNKDSKLFSSLTQYSS--RHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLE-EFQEE- 495
K D ++ + +H +LL+GTP + ++F ++ L G G + EF +
Sbjct: 331 KKKSDPPEIKTVLDVAEKVKHIILLSGTPSVSRPFDIFHQINMLWPGLLGKDKYEFAKTY 390
Query: 496 -------------FKDINQEEQISRLHKMLAPH-LLRRVKKDVMKELPPKKELILRVELS 541
F+D ++ ++ L+ +L ++RR+K+ ++ +LPPK+ I+ + L
Sbjct: 391 CEVGLVRGIQGKIFQDFSKGTRLLELNILLNQTVMIRRLKQHLLTQLPPKRRQIVTILLK 450
Query: 542 SKQKEYYKAILT 553
AI++
Sbjct: 451 KSDIALAMAIVS 462
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 626 RVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTR 685
+++++ +LD ++++ K + RIDG +RQ+ + F + + ++
Sbjct: 556 KMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQFSSEVKIA-IIGVE 614
Query: 686 AGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTI 738
AGG+G++ + A V+ + P LQA RAHR GQT+ V +Y + T+
Sbjct: 615 AGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTM 667
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 618 VKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSR 677
V +K G + ++++Q+ ML+LLE Y R+DG + A R + FN
Sbjct: 1117 VPIKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVT 1176
Query: 678 FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGT 737
++S +A LG+N+ A V++ D WNP + QA+ RAHR+GQT V + R + T
Sbjct: 1177 V-MIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDT 1235
Query: 738 I 738
+
Sbjct: 1236 V 1236
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 14/179 (7%)
Query: 424 LKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDA 483
L + W +++DE +KN +++ + ++ R L+GTP+QN++D+L+ FL
Sbjct: 782 LAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 841
Query: 484 GKFGSLEEFQEEFKDI---NQEEQISRLHKMLAPHLLRRVKKDVMK-----ELPPKKELI 535
+ S F K+ N + +L +L +LRR K ++ LPPK +
Sbjct: 842 DPYSSYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIEL 901
Query: 536 LRVELSSKQKEYYKAILTRN---YQLLTRRGGAQISLINV---VMELRKLCCHPFMLEG 588
+V+ + +++++Y + + ++ G + + +N+ ++ LR+ C HP ++ G
Sbjct: 902 RKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLVNG 960
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 624 GHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLS 683
G + +++TQ+ MLDLLE Y R DGK+ R + FN ++S
Sbjct: 1114 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSV-MIMS 1172
Query: 684 TRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTI 738
+A LG+N+ A VI+ D WNP + QA+ RAHR+GQT V + R + T+
Sbjct: 1173 LKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTV 1227
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 138/365 (37%), Gaps = 94/365 (25%)
Query: 308 ILADEMGLGKTIQSIAFLA-------------------------------------SLYK 330
ILAD+ GLGKT+ +IA + SL K
Sbjct: 566 ILADDQGLGKTVSTIALILTERSTPYLPCEEDSKNGGCNQSDHSQVVFNENKVVEDSLCK 625
Query: 331 EGISPH---LVVAPLSTLRNWEREF---ATWAPQMNVVMYVGSAQAR---------TVIR 375
P L+V P S +R W E T ++V++Y G ++ + VI
Sbjct: 626 MRGRPAAGTLIVCPTSLMRQWADELRKKVTLEAHLSVLVYHGCSRTKDPHELAKYDVVIT 685
Query: 376 EYEFY---FPXXXXXXXXXXSGQI---------VSESKQD-----------RIKFDVLLT 412
Y P G I +K+D R D
Sbjct: 686 TYSLVSVEVPKQPRDRADEEKGGIHDGGVESVGFGSNKKDLPNSQKKGTKKRKHMDC--- 742
Query: 413 SYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLD 472
E + + L + W +++DE +KN ++ + + ++ R L+GTP+QN++
Sbjct: 743 --EPVEFLSGPLAQVSWFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIA 800
Query: 473 ELFMLMHFLDAGKFGSLEEFQEEFKDINQE---EQISRLHKMLAPHLLRRVKKDVMK--- 526
+L+ FL + S + F E K+ E L +L +LRR K ++
Sbjct: 801 DLYSYFRFLKYDPYSSYQTFCETIKNPISSYPGEGYKTLQAILKKVMLRRTKDTLLDGKP 860
Query: 527 --ELPPKKELILRVELSSKQKEYYKAILTRN---YQLLTRRGGAQISLINV---VMELRK 578
LPPK + RV+ + +++++Y + + ++ G + + +N+ ++ LR+
Sbjct: 861 VISLPPKSIELRRVDFTKEERDFYSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQ 920
Query: 579 LCCHP 583
C HP
Sbjct: 921 ACGHP 925
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 618 VKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSR 677
V +K G + ++++Q+ ML+LLE Y R+DG + A R + FN
Sbjct: 959 VPIKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVT 1018
Query: 678 FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGT 737
++S +A LG+N+ A V++ D WNP + QA+ RAHR+GQT V + R + T
Sbjct: 1019 V-MIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDT 1077
Query: 738 I 738
+
Sbjct: 1078 V 1078
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 14/179 (7%)
Query: 424 LKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDA 483
L + W +++DE +KN +++ + ++ R L+GTP+QN++D+L+ FL
Sbjct: 624 LAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 683
Query: 484 GKFGSLEEFQEEFKDI---NQEEQISRLHKMLAPHLLRRVKKDVMK-----ELPPKKELI 535
+ S F K+ N + +L +L +LRR K ++ LPPK +
Sbjct: 684 DPYSSYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIEL 743
Query: 536 LRVELSSKQKEYYKAILTRN---YQLLTRRGGAQISLINV---VMELRKLCCHPFMLEG 588
+V+ + +++++Y + + ++ G + + +N+ ++ LR+ C HP ++ G
Sbjct: 744 RKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLVNG 802
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 116/235 (49%), Gaps = 44/235 (18%)
Query: 405 IKFDVLLTSYEMINLDTT----SLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRV 460
+K+D++LT+Y + ++ + +K ++W +I+DE H +KN +++ + + + R
Sbjct: 384 MKYDIVLTTYGTLAVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRW 443
Query: 461 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF--KDINQ--EEQISRLHKMLAPHL 516
+TGTP+QN +L+ LM FL F S++ + + + + Q ++ +SRL ++A
Sbjct: 444 AVTGTPIQNGSFDLYSLMAFLRFEPF-SIKSYWQSLIQRPLGQGNKKGLSRLQVLMATIS 502
Query: 517 LRRVKKDVMKELPPKKELILRVELSSKQKEYYKAI----------------LTRNYQLLT 560
LRR K+ + LPPK VELS ++++ Y + L RNY
Sbjct: 503 LRRTKEKSLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYS--- 559
Query: 561 RRGGAQISLINVVMELRKLC-----CHP----FMLEGVEPDIDDPKEFHKQLLES 606
+++++++ LR+LC C P F D+ D E ++L+ +
Sbjct: 560 -------TVLSIILRLRQLCDDMSLCPPELRSFTTSTSVEDVTDKPELLQKLVAA 607
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 612 LLDKMMVKLKEQGH-RVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRF 670
LL +M +E + + ++++QF+ ML LLE + R+DG + +R I F
Sbjct: 693 LLSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEF 752
Query: 671 -NAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLI 729
N + + L S +A G GINL A V ++D WNP + QAM R HR+GQ +V +
Sbjct: 753 GNPELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKM 812
Query: 730 YRLITRGTI 738
R+I R +I
Sbjct: 813 IRMIARNSI 821
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 141/326 (43%), Gaps = 42/326 (12%)
Query: 286 LHPYQLEGLNFLRFSWSKQTHV---ILADEMGLGKTIQSIAF-----LASLYKE------ 331
L +Q LN++R + H ILAD+ GLGKTI +I+ L S K+
Sbjct: 53 LMRHQKIALNWMRKKEKRSRHCLGGILADDQGLGKTISTISLILLQKLKSQSKQRKRKGQ 112
Query: 332 GISPHLVVAPLSTLRNWEREFATWAP---QMNVVMYVGSAQAR--TVIREYEFYFPXXXX 386
L+V P S ++ W RE +++V+++ GS + + T I Y+
Sbjct: 113 NSGGTLIVCPASVVKQWAREVKEKVSDEHKLSVLVHHGSHRTKDPTEIAIYDVVMTTYAI 172
Query: 387 XXXXXXSGQIVSESKQDRIKFDVLLTSYEMINLDTTSLKPIKWESMIVDEGHRLKNKDSK 446
+++ + D ++ L +I +L ++W +++DE H +KN +
Sbjct: 173 VTNEVPQNPMLN--RYDSMRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNHRTL 230
Query: 447 LFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---DINQEE 503
+ + ++ R LTGTP++N +D+L+ FL + F + K D
Sbjct: 231 IAKACFSLRAKRRWCLTGTPIKNKVDDLYSYFRFLRYHPYAMCNSFHQRIKAPIDKKPLH 290
Query: 504 QISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQK-EYYKAILTRNYQLLTRR 562
+L +L +LRR K + ++EL+S+ K E Y A T + +
Sbjct: 291 GYKKLQAILRGIMLRRTK---------EWSFYRKLELNSRWKFEEYAADGTLHEHM---- 337
Query: 563 GGAQISLINVVMELRKLCCHPFMLEG 588
L+ +++ LR+ C HP ++ G
Sbjct: 338 ----AYLLVMLLRLRQACNHPQLVNG 359
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 655 DGKVGGAERQIR--IDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADL 712
D V RQ R ++ N+ + L+S +AG LG+N+ A VI+ D WNP +
Sbjct: 483 DSSVACRARQSRHSTNKDNSISGLVCAMLMSLKAGNLGLNMVAASHVILLDLWWNPTTED 542
Query: 713 QAMARAHRLGQTNKVLIYRLITRGTI 738
QA+ RAHR+GQT V + R+ + T+
Sbjct: 543 QAIDRAHRIGQTRAVTVTRIAIKNTV 568
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 31/184 (16%)
Query: 308 ILADEMGLGKTIQSIAFLASL-------YKEGISPHLVVAPLSTLRNWEREFA--TWAPQ 358
ILADEMG+GKTIQ+I+ + + +E + LV+ P L W E + T
Sbjct: 157 ILADEMGMGKTIQAISLVLARREVDRAKSREAVGHTLVLVPPVALSQWLDEISRLTSPGS 216
Query: 359 MNVVMYVGSAQARTV--IREYEFYFPXXXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEM 416
V+ Y G + + V + Y+F S + +E ++D E
Sbjct: 217 TRVLQYHGPKRDKNVQKLMNYDFVL---------TTSPIVENEYRKD-----------EG 256
Query: 417 INLDTTSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFM 476
++ + L IKW +IVDE H +KN+ S+ ++ + +R L+GTPLQN++DEL+
Sbjct: 257 VDETMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEATYRWALSGTPLQNDVDELYS 316
Query: 477 LMHF 480
L+ +
Sbjct: 317 LVSY 320
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 604 LESSGKLQLLD---KMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGG 660
++S K++ L + MV+ ++ + ++++QF LDL+ ++ G +
Sbjct: 503 FKTSTKIEALREEIRFMVE-RDWSAKAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSK 561
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
A + + F + R L+S +AGG+ +NL A V + D WNP + QA R HR
Sbjct: 562 AAKDAALKNFKEEPDCR-VLLMSLQAGGVALNLTAASHVFMMDPWWNPAVERQAQDRIHR 620
Query: 721 LGQTNKVLIYRLITRGTI 738
+GQ V + R I T+
Sbjct: 621 IGQCKPVRVVRFIMEKTV 638
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 626 RVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTR 685
+ +I++Q+ MLDL+E + R+DG + A R + F+ K + L+S +
Sbjct: 894 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVKV-MLMSLK 952
Query: 686 AGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTI 738
AG LG+N+ A VI+ D WNP + QA+ RAHR+GQT V + R+ + T+
Sbjct: 953 AGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTV 1005
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 41/264 (15%)
Query: 329 YKEGISPHLVVAPLSTLRNWEREF---ATWAPQMNVVMYVGSAQAR--TVIREYEFYFPX 383
+K + L+V P S +R W RE + +++V++Y GS + + + EY+
Sbjct: 409 WKRPAAGTLIVCPASVVRQWARELDEKVSEESKLSVLVYHGSNRTKDPNELAEYDVVVTT 468
Query: 384 XXXXXXXXXSGQIVSESKQDRIKFDVLLTSYEMINL----------------------DT 421
+ +V E + D D + N DT
Sbjct: 469 YAIVTNEAPNKFLVDEDENDEKNTDRYGLASGFSNNKKRKVVVGASKKSKRRGRKSTNDT 528
Query: 422 TS------LKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELF 475
+S L + W +++DE +KN +++ S ++ R L+GTP+QN +D+L+
Sbjct: 529 SSEPDCGPLGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLY 588
Query: 476 MLMHFLDAGKFGSLEEFQEEFK---DINQEEQISRLHKMLAPHLLRRVKKDVMK-----E 527
FL + + F K N + +L +L +LRR K ++
Sbjct: 589 SYFRFLRYDPYAVYKSFYSTIKVPISRNSCQGYKKLQAVLRAIMLRRTKGTLLDGKPIIN 648
Query: 528 LPPKKELILRVELSSKQKEYYKAI 551
LPPK + +V+ S ++ +YK +
Sbjct: 649 LPPKVVNLSQVDFSVAERSFYKKL 672
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 626 RVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTR 685
+ +I++Q+ MLDL+E + R+DG + R + F+ + ++S +
Sbjct: 828 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKV-MIMSLK 886
Query: 686 AGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTI 738
AG LG+N+ A VI+ D WNP + QA+ RAHR+GQT V + R+ + T+
Sbjct: 887 AGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTV 939
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 127/303 (41%), Gaps = 47/303 (15%)
Query: 337 LVVAPLSTLRNWEREF---ATWAPQMNVVMYVGSAQARTVIR--EYEFYFPXXXXXXXXX 391
L+V P S +R W RE T +++V++Y G + + I +Y+
Sbjct: 346 LIVCPASVVRQWARELDEKVTDEAKLSVLIYHGGNRTKDPIELAKYDVVMTTYAIVSNEV 405
Query: 392 XSGQIVSESKQD----------------RIKFDVLLTSY------------EMINLDTTS 423
+V + + D + + +V+ T+ + + D+ +
Sbjct: 406 PKQPLVDDDENDEKNSEKYGLASGFSINKKRKNVVGTTKKSKKKKGNNNAGDSSDPDSGT 465
Query: 424 LKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDA 483
L + W +++DE +KN +++ + ++ R L+GTP+QN +D+L+ FL
Sbjct: 466 LAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLKY 525
Query: 484 GKFGSLEEFQEEFK---DINQEEQISRLHKMLAPHLLRRVKKDVMK-----ELPPKKELI 535
+ + F + K N + +L +L +LRR K ++ LPPK +
Sbjct: 526 DPYAVYKSFCHQIKGPISRNSLQGYKKLQAVLRAIMLRRTKGTLLDGQPIINLPPKTINL 585
Query: 536 LRVELSSKQKEYYKAILTRNYQLLTRRGGAQI------SLINVVMELRKLCCHPFMLEGV 589
+V+ S +++ +Y + + + A +++ +++ LR+ C HP +++
Sbjct: 586 SQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRLRQACDHPQLVKRY 645
Query: 590 EPD 592
D
Sbjct: 646 NSD 648
>AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22536293-22540610 REVERSE
LENGTH=1022
Length = 1022
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 14/179 (7%)
Query: 424 LKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFLDA 483
L + W +++DE +KN +++ + ++ R L+GTP+QN++D+L+ FL
Sbjct: 789 LAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 848
Query: 484 GKFGSLEEFQEEFKDI---NQEEQISRLHKMLAPHLLRRVKKDVMK-----ELPPKKELI 535
+ S F K+ N + +L +L +LRR K ++ LPPK +
Sbjct: 849 DPYSSYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIEL 908
Query: 536 LRVELSSKQKEYYKAILTRN---YQLLTRRGGAQISLINV---VMELRKLCCHPFMLEG 588
+V+ + +++++Y + + ++ G + + +N+ ++ LR+ C HP ++ G
Sbjct: 909 RKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLVNG 967
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Query: 604 LESSGKLQLLD---KMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDGKVGG 660
++S K++ L + MV+ ++ + ++++QF LDL+ ++ G +
Sbjct: 658 FQTSTKIEALREEIRFMVE-RDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTM 716
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
A R I++F R FL+S +AGG+ +NL A V + D WNP + QA R HR
Sbjct: 717 AARDTAINKFKEDPDCRV-FLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHR 775
Query: 721 LGQTNKVLIYRLITRGTI 738
+GQ + + R I T+
Sbjct: 776 IGQYKPIRVVRFIIENTV 793
>AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 26/180 (14%)
Query: 576 LRKLCCHPFMLEG-VEPDIDDPKEFHKQL---LESSGKLQLLDKMMVKLKEQGHRVLIYT 631
+RK C HP++++ ++ + E H+ L +++SGKL LLDKM+ +K+ G + +++
Sbjct: 523 VRKTCDHPYVMDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFY 582
Query: 632 QFQH------MLDLLEDYC-------SYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRF 678
Q + ++LED+ SY+ +Y +++ I+ FN K S
Sbjct: 583 QATQTPEGLLLGNILEDFVGQRFGPKSYEHGIY--------SSKKNSAINNFN-KESQCC 633
Query: 679 CFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTI 738
LL TRA I L AD I++ S NP D++ + + + + I+RL + T+
Sbjct: 634 VLLLETRACSQTIKLLRADAFILFGSSLNPSHDVKHVEKIKIESCSERTKIFRLYSVCTV 693
>AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 26/180 (14%)
Query: 576 LRKLCCHPFMLEG-VEPDIDDPKEFHKQL---LESSGKLQLLDKMMVKLKEQGHRVLIYT 631
+RK C HP++++ ++ + E H+ L +++SGKL LLDKM+ +K+ G + +++
Sbjct: 523 VRKTCDHPYVMDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFY 582
Query: 632 QFQH------MLDLLEDYC-------SYKKWLYERIDGKVGGAERQIRIDRFNAKNSSRF 678
Q + ++LED+ SY+ +Y +++ I+ FN K S
Sbjct: 583 QATQTPEGLLLGNILEDFVGQRFGPKSYEHGIY--------SSKKNSAINNFN-KESQCC 633
Query: 679 CFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTI 738
LL TRA I L AD I++ S NP D++ + + + + I+RL + T+
Sbjct: 634 VLLLETRACSQTIKLLRADAFILFGSSLNPSHDVKHVEKIKIESCSERTKIFRLYSVCTV 693
>AT2G40770.1 | Symbols: | zinc ion binding;DNA
binding;helicases;ATP binding;nucleic acid binding |
chr2:17013535-17021315 REVERSE LENGTH=1664
Length = 1664
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 31/191 (16%)
Query: 422 TSLKPIKWESMIVDEGHRLKNKDSKLFSSLTQYSSRHRVLLTGTPLQNNLDELFMLMHFL 481
T L I W + +DE +++ + + ++HR +TGTP+Q LD+LF L+ FL
Sbjct: 593 TPLTRIFWWRICLDEAQMVESNAAAATEMALRLYTKHRWCITGTPIQRKLDDLFGLLKFL 652
Query: 482 DAGKFGSLEEFQEEFKDINQEEQISRL---HKMLAPHLLRRVKKDVMKE--LPPKKELIL 536
A F + E +D + + HK + R K V E LPP++E +
Sbjct: 653 KANPFDVSRWWIEVIRDPYERRDTKAMEFTHKFFKQVMWRSSKVHVADELQLPPQEECVS 712
Query: 537 RVELSSKQKEYY-------------------KAILTRNYQ-----LLTRRGGAQISLINV 572
++ S+ ++ +Y + IL R + L+T A+ L+N
Sbjct: 713 WLKFSAIEEHFYSRQHDTCVSYAREVIETLKRDILKRGHTSSDNPLVTHAEAAK--LLNS 770
Query: 573 VMELRKLCCHP 583
+++LR+ CCHP
Sbjct: 771 LLKLRQACCHP 781
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 616 MMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWLYERIDG---------KVGGAERQI- 665
+ +K + +VL+++ + +LD+LE + R+ G K G+E++
Sbjct: 1441 LWIKSSDPQTKVLVFSSWNDVLDVLEHAFAANSITCIRMKGGRKSQTAISKFKGSEKETQ 1500
Query: 666 RIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTN 725
+ + + S LL + G G+NL A VI+ + NP A+ QA+ R HR+GQ
Sbjct: 1501 KTNSHQKEEKSIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEK 1560
Query: 726 KVLIYRLITRGTI 738
L++R + GT+
Sbjct: 1561 PTLVHRFLVSGTV 1573
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%)
Query: 662 ERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRL 721
ER ID+F + L S A GI+L A VI+ DS+WNP QA+ARA R
Sbjct: 1121 ERGRVIDKFEEPGNPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRP 1180
Query: 722 GQTNKVLIYRLITRGTI 738
GQ V +Y+L++RGT+
Sbjct: 1181 GQQKVVYVYQLLSRGTL 1197
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%)
Query: 662 ERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRL 721
ER ID+F L S A GI+L A VI+ DS+WNP QA+ARA R
Sbjct: 1115 ERGRVIDKFEEPGGQSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRP 1174
Query: 722 GQTNKVLIYRLITRGTI 738
GQ V +Y+L++RGT+
Sbjct: 1175 GQQKVVYVYQLLSRGTL 1191
>AT5G22760.1 | Symbols: | PHD finger family protein |
chr5:7571635-7577662 FORWARD LENGTH=1566
Length = 1566
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 47 DAKEDSCQACGESGNLLSCETCTYAYHSKCLLPPFKGPLPDN-WRCPECV 95
DA D C+ CG G LL C+ C AYHS+C + K +PD W CPEC
Sbjct: 410 DANSDECRLCGMDGTLLCCDGCPLAYHSRC-IGVVKMYIPDGPWYCPECT 458
>AT5G35210.1 | Symbols: | metalloendopeptidases;zinc ion
binding;DNA binding | chr5:13474499-13482238 REVERSE
LENGTH=1706
Length = 1706
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 47 DAKEDSCQACGESGNLLSCETCTYAYHSKCLLPPFKGPLPDN-WRCPECV 95
D D C+ CG G LL C+ C AYHS+C + K +PD W CPEC
Sbjct: 408 DGNSDECRICGMDGTLLCCDGCPLAYHSRC-IGVVKMYIPDGPWFCPECT 456
>AT5G35210.2 | Symbols: | metalloendopeptidases;zinc ion
binding;DNA binding | chr5:13476213-13482238 REVERSE
LENGTH=1539
Length = 1539
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 47 DAKEDSCQACGESGNLLSCETCTYAYHSKCLLPPFKGPLPDN-WRCPECV 95
D D C+ CG G LL C+ C AYHS+C + K +PD W CPEC
Sbjct: 408 DGNSDECRICGMDGTLLCCDGCPLAYHSRC-IGVVKMYIPDGPWFCPECT 456