Miyakogusa Predicted Gene
- Lj1g3v1819880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1819880.1 Non Chatacterized Hit- tr|K3YG90|K3YG90_SETIT
Uncharacterized protein OS=Setaria italica GN=Si013258,32.53,9e-19,no
description,Armadillo-like helical; Arm,Armadillo;
Armadillo/beta-catenin-like repeats,Armadillo;,CUFF.28049.1
(344 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G31890.2 | Symbols: | ARM repeat superfamily protein | chr4:... 402 e-112
AT4G31890.1 | Symbols: | ARM repeat superfamily protein | chr4:... 402 e-112
AT2G25130.1 | Symbols: | ARM repeat superfamily protein | chr2:... 360 1e-99
AT2G27430.1 | Symbols: | ARM repeat superfamily protein | chr2:... 94 1e-19
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 88 8e-18
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 88 1e-17
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 88 1e-17
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 87 2e-17
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 86 3e-17
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 86 3e-17
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:... 82 5e-16
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 80 3e-15
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 79 3e-15
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 77 1e-14
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 77 2e-14
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 73 4e-13
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 68 1e-11
AT5G58680.1 | Symbols: | ARM repeat superfamily protein | chr5:... 66 3e-11
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 66 3e-11
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 64 1e-10
AT3G03440.1 | Symbols: | ARM repeat superfamily protein | chr3:... 64 2e-10
AT5G14510.1 | Symbols: | ARM repeat superfamily protein | chr5:... 60 2e-09
AT5G62560.1 | Symbols: | RING/U-box superfamily protein with AR... 57 2e-08
AT4G16490.1 | Symbols: | ARM repeat superfamily protein | chr4:... 56 4e-08
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 54 2e-07
AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 | chr5:26... 53 3e-07
AT4G12710.1 | Symbols: | ARM repeat superfamily protein | chr4:... 53 3e-07
>AT4G31890.2 | Symbols: | ARM repeat superfamily protein |
chr4:15427290-15429049 REVERSE LENGTH=518
Length = 518
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/344 (63%), Positives = 250/344 (72%), Gaps = 8/344 (2%)
Query: 1 MLGAIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESREG 60
MLGAI PLV M+D +QIASLYALLNLGIGNDANKAAIVK GAVHKMLKLIES
Sbjct: 183 MLGAIPPLVSMIDDSRIVDAQIASLYALLNLGIGNDANKAAIVKAGAVHKMLKLIESPNT 242
Query: 61 PDSSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALR 120
PD + EA+VANFLGLSALDSNKPIIGSSGAI FLV+TLQNL DE ++DALR
Sbjct: 243 PDQEIAEAVVANFLGLSALDSNKPIIGSSGAIIFLVKTLQNL-DE---TSSSQAREDALR 298
Query: 121 ALFNLTIFQANVSFVLETDLVAFLVNAIGDMEVSERVLSILGNLVSSPEGRKCISAVRDA 180
AL+NL+I+Q NVSF+LETDL+ +L+N +GDMEVSER+L+IL NLV+ PEGRK I V DA
Sbjct: 299 ALYNLSIYQPNVSFILETDLITYLLNTLGDMEVSERILAILSNLVAVPEGRKAIGLVCDA 358
Query: 181 IPVLVDVLHWVDSPGCQEKASYILMIMAHKAYGDRQTMIEAGIASSXXXXXXXXXXXAQK 240
PVLVDVL+W DSPGCQEKA+YILM+MAHK YGDRQ MIEAGI S+ AQK
Sbjct: 359 FPVLVDVLNWTDSPGCQEKATYILMLMAHKGYGDRQVMIEAGIESALLELTLLGSALAQK 418
Query: 241 RASRILGCLRIDKGKQVSGANVSAPICASSSSFNGGGKEECLVEEEDGATGMSEEKKAXX 300
RASRIL CLR+DKGKQV + S C + S+ G ++ L EE+ MSEE+KA
Sbjct: 419 RASRILECLRVDKGKQVLDSTGS---CGALSAPIYGTRDNGLDHEENDLM-MSEERKAVK 474
Query: 301 XXXXXXXXXXMMKIVKRANLRQDFVPSQHFAALXXXXXXKSLPF 344
M +IVKRANL QDFVPS+HF +L KSLPF
Sbjct: 475 QLVQQSLQSNMKRIVKRANLPQDFVPSEHFKSLSLSSTSKSLPF 518
>AT4G31890.1 | Symbols: | ARM repeat superfamily protein |
chr4:15427290-15429049 REVERSE LENGTH=518
Length = 518
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/344 (63%), Positives = 250/344 (72%), Gaps = 8/344 (2%)
Query: 1 MLGAIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESREG 60
MLGAI PLV M+D +QIASLYALLNLGIGNDANKAAIVK GAVHKMLKLIES
Sbjct: 183 MLGAIPPLVSMIDDSRIVDAQIASLYALLNLGIGNDANKAAIVKAGAVHKMLKLIESPNT 242
Query: 61 PDSSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALR 120
PD + EA+VANFLGLSALDSNKPIIGSSGAI FLV+TLQNL DE ++DALR
Sbjct: 243 PDQEIAEAVVANFLGLSALDSNKPIIGSSGAIIFLVKTLQNL-DE---TSSSQAREDALR 298
Query: 121 ALFNLTIFQANVSFVLETDLVAFLVNAIGDMEVSERVLSILGNLVSSPEGRKCISAVRDA 180
AL+NL+I+Q NVSF+LETDL+ +L+N +GDMEVSER+L+IL NLV+ PEGRK I V DA
Sbjct: 299 ALYNLSIYQPNVSFILETDLITYLLNTLGDMEVSERILAILSNLVAVPEGRKAIGLVCDA 358
Query: 181 IPVLVDVLHWVDSPGCQEKASYILMIMAHKAYGDRQTMIEAGIASSXXXXXXXXXXXAQK 240
PVLVDVL+W DSPGCQEKA+YILM+MAHK YGDRQ MIEAGI S+ AQK
Sbjct: 359 FPVLVDVLNWTDSPGCQEKATYILMLMAHKGYGDRQVMIEAGIESALLELTLLGSALAQK 418
Query: 241 RASRILGCLRIDKGKQVSGANVSAPICASSSSFNGGGKEECLVEEEDGATGMSEEKKAXX 300
RASRIL CLR+DKGKQV + S C + S+ G ++ L EE+ MSEE+KA
Sbjct: 419 RASRILECLRVDKGKQVLDSTGS---CGALSAPIYGTRDNGLDHEENDLM-MSEERKAVK 474
Query: 301 XXXXXXXXXXMMKIVKRANLRQDFVPSQHFAALXXXXXXKSLPF 344
M +IVKRANL QDFVPS+HF +L KSLPF
Sbjct: 475 QLVQQSLQSNMKRIVKRANLPQDFVPSEHFKSLSLSSTSKSLPF 518
>AT2G25130.1 | Symbols: | ARM repeat superfamily protein |
chr2:10695243-10696959 REVERSE LENGTH=468
Length = 468
Score = 360 bits (923), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 201/347 (57%), Positives = 235/347 (67%), Gaps = 30/347 (8%)
Query: 1 MLGAIQPLVGMLDLEEDTHSQ-IASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESRE 59
MLGAI PLV M+D E + IASLYALLNLGIGND NKAAIVK G VHKMLKL+ES +
Sbjct: 149 MLGAIPPLVSMIDDESQSEDALIASLYALLNLGIGNDVNKAAIVKAGVVHKMLKLVESSK 208
Query: 60 GPDSSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDAL 119
P+ ++ EAIVANFLGLSALDSNKPIIGSSGAI FLV+TL+N + ++DAL
Sbjct: 209 PPNQAIAEAIVANFLGLSALDSNKPIIGSSGAIIFLVKTLKNFEE----TSSSQAREDAL 264
Query: 120 RALFNLTIFQANVSFVLETDLVAFLVNAIGDMEVSERVLSILGNLVSSPEGRKCISAVRD 179
RAL+NL+I+ NVSF+LETDL+ FL+N +GDMEVSER+L+IL N+VS PEGRK I V +
Sbjct: 265 RALYNLSIYHQNVSFILETDLIPFLLNTLGDMEVSERILAILTNVVSVPEGRKAIGEVVE 324
Query: 180 AIPVLVDVLHWVDSPGCQEKASYILMIMAHKAYGDRQTMIEAGIASSXXXXXXXXXXXAQ 239
A P+LVDVL+W DS CQEKA YILM+MAHK YGDR MIEAGI SS AQ
Sbjct: 325 AFPILVDVLNWNDSIKCQEKAVYILMLMAHKGYGDRNAMIEAGIESSLLELTLVGSPLAQ 384
Query: 240 KRASRILGCLR-IDKGKQVSGANVSAPICASSSSFNGGGKEECLVEEEDGATGMSEEKKA 298
KRASR+L CLR +DKGKQ VSAPI +SS L E M++E+KA
Sbjct: 385 KRASRVLECLRVVDKGKQ-----VSAPIYGTSS----------LGRERGHDLRMTDERKA 429
Query: 299 XXXXXXXXXXXXMMKIVKRANLRQDFV-PSQHFAALXXXXXXKSLPF 344
M +IVKRANL DFV SQHF+ KSL F
Sbjct: 430 VKQLVQQSLQSNMKRIVKRANLPHDFVTTSQHFS--------KSLTF 468
>AT2G27430.1 | Symbols: | ARM repeat superfamily protein |
chr2:11729914-11733170 REVERSE LENGTH=438
Length = 438
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 16/256 (6%)
Query: 2 LGAIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESREGP 61
LG IQ LV M+ + H Q A++ AL+ L G NKA +V K+ K +E
Sbjct: 118 LGVIQILVSMVASDVSGH-QKAAVNALIQLSHGTYTNKALMVNADICSKLPKNVEVL--- 173
Query: 62 DSSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALRA 121
D S A L LS+L + + + SS +PFL+ T+ + K+ L
Sbjct: 174 DQSTRHAFAELLLSLSSLTNTQLPVASSQILPFLMDTMNS------DSTDMKTKEICLAT 227
Query: 122 LFNLTIFQANVSFVLETDLVAFLVNAIGDMEVSERVLSILGNLVSSPEGRKCISAVRDAI 181
+ NL + N ++ V L++ + ++SE+ L+ LG LV + G+K A+ D +
Sbjct: 228 ISNLCLVLENAGPLVLNGAVETLLSLMSTKDLSEKALASLGKLVVTQMGKK---AMEDCL 284
Query: 182 PV---LVDVLHWVDSPGCQEKASYILMIMAHKAYGDRQTMIEAGIASSXXXXXXXXXXXA 238
V L+++L W D P CQE A+YILM++AH+++ R+ M +AGI
Sbjct: 285 LVSKGLIEILTWEDIPKCQEYAAYILMVLAHQSWSQREKMAKAGIVPVLLEVSLLGSPLV 344
Query: 239 QKRASRILGCLRIDKG 254
QKRA ++L + ++
Sbjct: 345 QKRAVKLLQWFKDERN 360
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 35/270 (12%)
Query: 3 GAIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKV-----GAVHKMLK-LIE 56
GAI LV +L + D+ +Q ++ ++LNL I + NK IV G VH + K +E
Sbjct: 397 GAIPLLVNLLTISNDSRTQEHAVTSILNLSICQE-NKGKIVYSSGAVPGIVHVLQKGSME 455
Query: 57 SREGPDSSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQ 116
+RE A LS +D NK IG++GAIP LV L K+
Sbjct: 456 AREN--------AAATLFSLSVIDENKVTIGAAGAIPPLVTLLSE--------GSQRGKK 499
Query: 117 DALRALFNLTIFQANVSFVLETDLVAFLVNAIGDME--VSERVLSILGNLVSSPEGRKCI 174
DA ALFNL IFQ N + LV L+ + + E + + LSIL L S P+G+ +
Sbjct: 500 DAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSHPDGKSEV 559
Query: 175 SAVRDAIPVLVDVLHWVDSPGCQEKASYILMIMAHKAYGDRQTMIEA---GIASSXXXXX 231
A DA+PVLVD + SP +E ++ +L+ H ++Q +IEA GI
Sbjct: 560 GAA-DAVPVLVDFIR-SGSPRNKENSAAVLV---HLCSWNQQHLIEAQKLGIMDLLIEMA 614
Query: 232 XXXXXXAQKRASRILGCLRI--DKGKQVSG 259
+++A+++L D+ KQ SG
Sbjct: 615 ENGTDRGKRKAAQLLNRFSRFNDQQKQHSG 644
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 120/240 (50%), Gaps = 16/240 (6%)
Query: 20 SQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESREGPDSSVCEAIVANFLGLSAL 79
+Q + AL NL + N+ NK ++ G + + K+I S E S+ A +L LS L
Sbjct: 486 AQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMISSAESHGSAT-----ALYLNLSCL 540
Query: 80 DSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALRALFNLTIFQANVSFVLETD 139
D K +IGSS A+PFLV+ LQ + K DAL AL+NL+ + N+ +L ++
Sbjct: 541 DEAKSVIGSSQAVPFLVQLLQKEIE-------TQCKLDALHALYNLSTYSPNIPALLSSN 593
Query: 140 LVAF---LVNAIGDMEVSERVLSILGNLVSSPEGRKCISAVRDAIPVLVDVLHWVDSPGC 196
++ L+ + G+ E+ L++L NL SS EG+ + + I L VL D+
Sbjct: 594 IIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTE- 652
Query: 197 QEKASYILMIMAHKAYGDRQTMIEAGIASSXXXXXXXXXXXAQKRASRILGCLRIDKGKQ 256
QE+A L+I+ + Q +++ G+ S ++++ ++L R ++ ++
Sbjct: 653 QEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLMLFREERQQR 712
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 120/240 (50%), Gaps = 16/240 (6%)
Query: 20 SQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESREGPDSSVCEAIVANFLGLSAL 79
+Q + AL NL + N+ NK ++ G + + K+I S E S+ A +L LS L
Sbjct: 486 AQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMISSAESHGSAT-----ALYLNLSCL 540
Query: 80 DSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALRALFNLTIFQANVSFVLETD 139
D K +IGSS A+PFLV+ LQ + K DAL AL+NL+ + N+ +L ++
Sbjct: 541 DEAKSVIGSSQAVPFLVQLLQKEIE-------TQCKLDALHALYNLSTYSPNIPALLSSN 593
Query: 140 LVAF---LVNAIGDMEVSERVLSILGNLVSSPEGRKCISAVRDAIPVLVDVLHWVDSPGC 196
++ L+ + G+ E+ L++L NL SS EG+ + + I L VL D+
Sbjct: 594 IIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTE- 652
Query: 197 QEKASYILMIMAHKAYGDRQTMIEAGIASSXXXXXXXXXXXAQKRASRILGCLRIDKGKQ 256
QE+A L+I+ + Q +++ G+ S ++++ ++L R ++ ++
Sbjct: 653 QEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLMLFREERQQR 712
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 112/227 (49%), Gaps = 32/227 (14%)
Query: 3 GAIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLI-----ES 57
GAI LVG+L D+ Q S+ ALLNL I + NK AIV GA+ +++++ E+
Sbjct: 394 GAIPLLVGLLSTP-DSRIQEHSVTALLNLSICEN-NKGAIVSAGAIPGIVQVLKKGSMEA 451
Query: 58 REGPDSSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQD 117
RE A LS +D NK IG+ GAIP LV L K+D
Sbjct: 452 REN--------AAATLFSLSVIDENKVTIGALGAIPPLVVLLNE--------GTQRGKKD 495
Query: 118 ALRALFNLTIFQANVSFVLETDLVAFLVNAI---GDMEVSERVLSILGNLVSSPEGRKCI 174
A ALFNL I+Q N + ++ L + G V E L+IL L S PEG+ I
Sbjct: 496 AATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDE-ALAILAILSSHPEGKAII 554
Query: 175 SAVRDAIPVLVDVLHWVDSPGCQEKASYILMIMAHKAYGDRQTMIEA 221
+ DA+P LV+ + SP +E A+ +L+ H GD Q ++EA
Sbjct: 555 GS-SDAVPSLVEFIR-TGSPRNRENAAAVLV---HLCSGDPQHLVEA 596
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 108/205 (52%), Gaps = 15/205 (7%)
Query: 3 GAIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESREGPD 62
GAI LV +L D+ +Q ++ ALLNL I ND NK AI GA+ ++ ++E+
Sbjct: 586 GAIVLLVELL-YSTDSATQENAVTALLNLSI-NDNNKKAIADAGAIEPLIHVLEN---GS 640
Query: 63 SSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALRAL 122
S E A LS ++ NK IG SGAI LV L N K+DA AL
Sbjct: 641 SEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGN--------GTPRGKKDAATAL 692
Query: 123 FNLTIFQANVSFVLETDLVAFLVNAIGDME-VSERVLSILGNLVSSPEGRKCISAVRDAI 181
FNL+I Q N + ++++ V +L++ + + ++ +++L NL + PEGR I I
Sbjct: 693 FNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMVDKAVAVLANLATIPEGRNAIGQ-EGGI 751
Query: 182 PVLVDVLHWVDSPGCQEKASYILMI 206
P+LV+V+ + G + A+ +L +
Sbjct: 752 PLLVEVVELGSARGKENAAAALLQL 776
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 108/205 (52%), Gaps = 15/205 (7%)
Query: 3 GAIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESREGPD 62
GAI LV +L D+ +Q ++ ALLNL I ND NK AI GA+ ++ ++E+
Sbjct: 583 GAIVLLVELL-YSTDSATQENAVTALLNLSI-NDNNKKAIADAGAIEPLIHVLEN---GS 637
Query: 63 SSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALRAL 122
S E A LS ++ NK IG SGAI LV L N K+DA AL
Sbjct: 638 SEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGN--------GTPRGKKDAATAL 689
Query: 123 FNLTIFQANVSFVLETDLVAFLVNAIGDME-VSERVLSILGNLVSSPEGRKCISAVRDAI 181
FNL+I Q N + ++++ V +L++ + + ++ +++L NL + PEGR I I
Sbjct: 690 FNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMVDKAVAVLANLATIPEGRNAIGQ-EGGI 748
Query: 182 PVLVDVLHWVDSPGCQEKASYILMI 206
P+LV+V+ + G + A+ +L +
Sbjct: 749 PLLVEVVELGSARGKENAAAALLQL 773
>AT1G24330.1 | Symbols: | ARM repeat superfamily protein |
chr1:8631779-8634835 FORWARD LENGTH=771
Length = 771
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 121/252 (48%), Gaps = 27/252 (10%)
Query: 27 ALLNLGIGNDANKAAIVKVGAVHKMLKLIE--SREGPDSSVCEAIVANFLGLSALDSNKP 84
AL NL + N+ NK ++ G + + K+I +GP +++ +L LS L+ KP
Sbjct: 493 ALFNLAVNNNRNKELMLTSGVIPLLEKMISCSQSQGPATAL-------YLNLSCLEKAKP 545
Query: 85 IIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALRALFNLTIFQANVSFVLETDLVAFL 144
+IGSS A+ F V L L D K K DAL AL+NL+ + N+ +L ++++ L
Sbjct: 546 VIGSSQAVSFFVNLL--LQDTK-----TQCKLDALHALYNLSTYSPNIPTLLSSNIIKSL 598
Query: 145 --VNAIGDMEVSERVLSILGNLVSSPEGRKCISAVRDAIPVLVDVLHWVDSPGCQEKASY 202
+ + G+ E+ L++L NL SS EG++ + + I L VL D+ QE+A
Sbjct: 599 QVLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVE-QEQAVS 657
Query: 203 ILMIMAHKAYGDRQTMIEAGIASSXXXXXXXXXXXAQKRASRILGCLRIDKGKQVSGAN- 261
L+I+ + Q +++ G+ S + ++ ++L R + + N
Sbjct: 658 CLVILCTGSESCIQMVLQEGVIPSLVSISVNGSPRGRDKSQKLLMLFREQRHRDQPSPNK 717
Query: 262 -------VSAPI 266
VSAP+
Sbjct: 718 EEAPRKTVSAPM 729
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 114/206 (55%), Gaps = 16/206 (7%)
Query: 3 GAIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESREGPD 62
GAI PL+ +L EE +Q ++ ALLNL I ++ NKA IV+VGA+ ++ ++ + G D
Sbjct: 478 GAITPLLSLLYSEEKL-TQEHAVTALLNLSI-SELNKAMIVEVGAIEPLVHVLNT--GND 533
Query: 63 SSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALRAL 122
+ E A+ LS L N+ IG S A ++ L NL + K+DA AL
Sbjct: 534 RAK-ENSAASLFSLSVLQVNRERIGQSNAA---IQALVNLLGKGTFRG----KKDAASAL 585
Query: 123 FNLTIFQANVSFVLETDLVAFLVNAIG-DMEVSERVLSILGNLVSSPEGRKCISAVRD-A 180
FNL+I N + +++ V +LV + D+E+ ++ +++L NL + EGR+ I VR+
Sbjct: 586 FNLSITHDNKARIVQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGEGRQAI--VREGG 643
Query: 181 IPVLVDVLHWVDSPGCQEKASYILMI 206
IP+LV+ + G + AS +L +
Sbjct: 644 IPLLVETVDLGSQRGKENAASVLLQL 669
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 113/206 (54%), Gaps = 16/206 (7%)
Query: 3 GAIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESREGPD 62
GAI PL+ +L EE +Q ++ ALLNL I + NKA IV+VGA+ ++ ++ + G D
Sbjct: 514 GAITPLLSLLYSEEKL-TQEHAVTALLNLSIS-ELNKAMIVEVGAIEPLVHVLNT--GND 569
Query: 63 SSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALRAL 122
+ E A+ LS L N+ IG S A ++ L NL + K+DA AL
Sbjct: 570 RAK-ENSAASLFSLSVLQVNRERIGQSNAA---IQALVNLLGKGTFRG----KKDAASAL 621
Query: 123 FNLTIFQANVSFVLETDLVAFLVNAIG-DMEVSERVLSILGNLVSSPEGRKCISAVRD-A 180
FNL+I N + +++ V +LV + D+E+ ++ +++L NL + EGR+ I VR+
Sbjct: 622 FNLSITHDNKARIVQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGEGRQAI--VREGG 679
Query: 181 IPVLVDVLHWVDSPGCQEKASYILMI 206
IP+LV+ + G + AS +L +
Sbjct: 680 IPLLVETVDLGSQRGKENAASVLLQL 705
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 110/229 (48%), Gaps = 32/229 (13%)
Query: 3 GAIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLI-----ES 57
GAI LV +L + DT +Q ++ +LNL I + NK I+ GAV ++ ++ E+
Sbjct: 235 GAIPVLVKLLTSDGDTETQENAVTCILNLSI-YEHNKELIMLAGAVTSIVLVLRAGSMEA 293
Query: 58 REGPDSSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQD 117
RE A LS D NK IIG+SGAI LV LQ K+D
Sbjct: 294 RENA--------AATLFSLSLADENKIIIGASGAIMALVDLLQ--------YGSVRGKKD 337
Query: 118 ALRALFNLTIFQANVSFVLETDLVAFLVNAIGDMEVSERV----LSILGNLVSSPEGRKC 173
A ALFNL I+Q N + +V LV + D SER+ L+IL L S+ +
Sbjct: 338 AATALFNLCIYQGNKGRAVRAGIVKPLVKMLTD-SSSERMADEALTILSVLASNQVAKTA 396
Query: 174 ISAVRDAIPVLVDVLHWVDSPGCQEKASYILMIMAHKAYGDRQTMIEAG 222
I +AIP L+D L D P +E A+ IL+ + + D + +I G
Sbjct: 397 ILRA-NAIPPLIDCLQ-KDQPRNRENAAAILLCLCKR---DTEKLISIG 440
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 110/229 (48%), Gaps = 32/229 (13%)
Query: 3 GAIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLI-----ES 57
GAI LV +L + DT +Q ++ +LNL I + NK I+ GAV ++ ++ E+
Sbjct: 383 GAIPVLVKLLTSDGDTETQENAVTCILNLSI-YEHNKELIMLAGAVTSIVLVLRAGSMEA 441
Query: 58 REGPDSSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQD 117
RE A LS D NK IIG+SGAI LV LQ K+D
Sbjct: 442 RENA--------AATLFSLSLADENKIIIGASGAIMALVDLLQ--------YGSVRGKKD 485
Query: 118 ALRALFNLTIFQANVSFVLETDLVAFLVNAIGDMEVSERV----LSILGNLVSSPEGRKC 173
A ALFNL I+Q N + +V LV + D SER+ L+IL L S+ +
Sbjct: 486 AATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSS-SERMADEALTILSVLASNQVAKTA 544
Query: 174 ISAVRDAIPVLVDVLHWVDSPGCQEKASYILMIMAHKAYGDRQTMIEAG 222
I +AIP L+D L D P +E A+ IL+ + + D + +I G
Sbjct: 545 ILRA-NAIPPLIDCLQ-KDQPRNRENAAAILLCLCKR---DTEKLISIG 588
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 3 GAIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLI-----ES 57
GAI LV +L ED +Q ++ +LNL I + NK I+ GAV +++++ E+
Sbjct: 373 GAIPVLVNLL-TSEDVATQENAITCVLNLSIYEN-NKELIMFAGAVTSIVQVLRAGTMEA 430
Query: 58 REGPDSSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQD 117
RE A LS D NK IIG SGAIP LV L+N K+D
Sbjct: 431 RENA--------AATLFSLSLADENKIIIGGSGAIPALVDLLEN--------GTPRGKKD 474
Query: 118 ALRALFNLTIFQANVSFVLETDLVAFLVNAIGD---MEVSERVLSILGNLVSSPEGRKCI 174
A ALFNL I+ N + +V LV + D + + L+IL L ++ + + I
Sbjct: 475 AATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAI 534
Query: 175 SAVRDAIPVLVDVLHWVDSPGCQEKASYILMIMAHKAYGDRQTMIEAG 222
+ +P L+ +L D +E A+ IL+ + + D + +I G
Sbjct: 535 VKA-NTLPALIGILQ-TDQTRNRENAAAILLSLCKR---DTEKLITIG 577
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 27/212 (12%)
Query: 3 GAIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLI-----ES 57
GAI LV +L D +Q S+ ALLNL I N+ NK AIV GA+ +++++ E+
Sbjct: 387 GAIPLLVELLS-SPDPRTQEHSVTALLNLSI-NEGNKGAIVDAGAITDIVEVLKNGSMEA 444
Query: 58 REGPDSSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQD 117
RE A LS +D NK IG++GAI L+ L+ K+D
Sbjct: 445 RENA--------AATLFSLSVIDENKVAIGAAGAIQALISLLEE--------GTRRGKKD 488
Query: 118 ALRALFNLTIFQANVSFVLETDLVAFLVNAIGDM--EVSERVLSILGNLVSSPEGRKCIS 175
A A+FNL I+Q N S ++ +V L + D + + L+IL L ++ EG+ I+
Sbjct: 489 AATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQEGKTAIA 548
Query: 176 AVRDAIPVLVDVLHWVDSPGCQEKASYILMIM 207
++IPVLV+++ SP +E A+ IL +
Sbjct: 549 EA-ESIPVLVEIIR-TGSPRNRENAAAILWYL 578
>AT5G58680.1 | Symbols: | ARM repeat superfamily protein |
chr5:23708247-23709320 REVERSE LENGTH=357
Length = 357
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 16/189 (8%)
Query: 3 GAIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESREGPD 62
GAI+PLV ++ D Q + A+LNL + D NK IV GAV ++ + R G
Sbjct: 103 GAIKPLVSLIS-SSDLQLQEYGVTAVLNLSLC-DENKEMIVSSGAVKPLVNAL--RLGTP 158
Query: 63 SSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALRAL 122
++ A A L LS ++ NK IG SGAIP LV L+N K+DA AL
Sbjct: 159 TTKENAACA-LLRLSQVEENKITIGRSGAIPLLVNLLEN--------GGFRAKKDASTAL 209
Query: 123 FNLTIFQANVSFVLETDLVAFLVNAIGDME--VSERVLSILGNLVSSPEGRKCISAVRDA 180
++L N + +E+ ++ LV + D E + ++ ++ L+S+PE + +
Sbjct: 210 YSLCSTNENKTRAVESGIMKPLVELMIDFESDMVDKSAFVMNLLMSAPESKPAV-VEEGG 268
Query: 181 IPVLVDVLH 189
+PVLV+++
Sbjct: 269 VPVLVEIVE 277
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 23/242 (9%)
Query: 15 EEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESREGPDSSVCEAIVANFL 74
E + +Q AL NL + N+ NK ++ G + + +++ + S + A +L
Sbjct: 479 ENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEMLCNPHSHGS-----VTAIYL 533
Query: 75 GLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALRALFNLTIFQANVSF 134
LS L+ KP+IGSS A+PF+V L K DAL +LF+L+ + N+
Sbjct: 534 NLSCLEEAKPVIGSSLAVPFMVNLLWT-------ETEVQCKVDALHSLFHLSTYPPNIPC 586
Query: 135 VLETDLVAFLVNAIGDMEVS------ERVLSILGNLVSSPEGRKCISAVRDAIPVLVDVL 188
+L D LVNA+ + +S E+ L++L NLV + G+ + + + L +L
Sbjct: 587 LLSAD----LVNALQSLTISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTIL 642
Query: 189 HWVDSPGCQEKASYILMIMAHKAYGDRQTMIEAGIASSXXXXXXXXXXXAQKRASRILGC 248
P QE+A +L+I+ + + + +++ G+ S ++RA ++L
Sbjct: 643 D-TGEPNEQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVSISVNGTQRGRERAQKLLTL 701
Query: 249 LR 250
R
Sbjct: 702 FR 703
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 4 AIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESREGPDS 63
AI LV +L D Q ++ LLNL I ND NK+ I + GA+ ++ ++++ ++
Sbjct: 464 AIPSLVSLL-YSTDERIQADAVTCLLNLSI-NDNNKSLIAESGAIVPLIHVLKTGYLEEA 521
Query: 64 SVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALRALF 123
A A LS ++ K IG +GAI LV L + K+DA ALF
Sbjct: 522 KANSA--ATLFSLSVIEEYKTEIGEAGAIEPLVDLLGS--------GSLSGKKDAATALF 571
Query: 124 NLTIFQANVSFVLETDLVAFLVNAIGD-MEVSERVLSILGNLVSSPEGRKCISAVRDAIP 182
NL+I N + V+E V +LV + + E+ + +L NL + EG+ I IP
Sbjct: 572 NLSIHHENKTKVIEAGAVRYLVELMDPAFGMVEKAVVVLANLATVREGKIAIGE-EGGIP 630
Query: 183 VLVDVLHWVDSPGCQEKASYILMIMAH 209
VLV+V+ + G + + +L + H
Sbjct: 631 VLVEVVELGSARGKENATAALLQLCTH 657
>AT3G03440.1 | Symbols: | ARM repeat superfamily protein |
chr3:815709-818568 FORWARD LENGTH=408
Length = 408
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 81/143 (56%), Gaps = 11/143 (7%)
Query: 4 AIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESREGPDS 63
A++PLV ML + A+L ALLNL + ++ NK +I++ GA+ ++ ++S
Sbjct: 105 AVEPLVSMLRFDSPESHHEAALLALLNLAVKDEKNKVSIIEAGALEPIINFLQSN---SP 161
Query: 64 SVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALRALF 123
++ E A+ L LSA +NKPIIG++G +P LV+ +++ K DA+ AL
Sbjct: 162 TLQEYASASLLTLSASANNKPIIGANGVVPLLVKVIKH--------GSPQAKADAVMALS 213
Query: 124 NLTIFQANVSFVLETDLVAFLVN 146
NL+ N+S +L T ++ ++N
Sbjct: 214 NLSTLPDNLSMILATKPLSPILN 236
>AT5G14510.1 | Symbols: | ARM repeat superfamily protein |
chr5:4678125-4679194 REVERSE LENGTH=327
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 21/218 (9%)
Query: 5 IQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESREGPDSS 64
I PL+ ML ++ +++A L ALL+L G++ NK IVK GAV +L++++S
Sbjct: 41 ISPLLSMLQSQDCITTEVA-LSALLSLAFGSERNKVRIVKSGAVPTLLEILQSE--TKMV 97
Query: 65 VCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALRALFN 124
V E +A L LS+ + NK + S+ + LV + K D + L N
Sbjct: 98 VLELAMAFLLILSSCNKNKVKMASTRLVQLLVGLI------GLDRLTIQAKVDGIATLQN 151
Query: 125 LTIFQANVSFVLETDLVAFLVNAIG----DMEVSERVLSILGNLVS-SPEGRKCISAVRD 179
L+ V V+ + L+ I E++++ +++L N++S SPE +S++
Sbjct: 152 LSTLHQIVPLVIASGAPYALLQVINFCDKSSELADKAVALLENIISHSPES---VSSIGG 208
Query: 180 AIPVLVDVLHWVDSPGCQEKASYILMIMAHKAYGDRQT 217
AI VLV+ + S C+E A IL+ + + DR+T
Sbjct: 209 AIGVLVEAIEE-GSAQCKEHAVGILLGICN---NDRET 242
>AT5G62560.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:25110073-25111752 FORWARD
LENGTH=559
Length = 559
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 108/233 (46%), Gaps = 15/233 (6%)
Query: 21 QIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESREGPDSSVCEAIVANFLGLSALD 80
Q + +++NL + NK IV+ G V ++ +++S + E + L+ D
Sbjct: 293 QTNAAASVVNLSL-EKQNKVKIVRSGFVPLLIDVLKSG---TTEAQEHVAGALFSLALED 348
Query: 81 SNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALRALFNLTIFQANVSFVLETDL 140
NK +IG GA+ L+ L++ E+ +QDA AL++L++ +N + ++
Sbjct: 349 ENKMVIGVLGAVEPLLHALRSSESER-------ARQDAALALYHLSLIPSNRTRLVRAGA 401
Query: 141 VAFLVNAIGDMEVSERVLSILGNLVSSPEGRKCISAVRDAIPVLVDVLHWV---DSPGCQ 197
V L++ + + + R+L +L NL + P+G+ + +A+ +LV L V DS +
Sbjct: 402 VPTLLSMVRSGDSTSRILLVLCNLAACPDGKGAM-LDGNAVAILVGKLREVGGGDSEAAR 460
Query: 198 EKASYILMIMAHKAYGDRQTMIEAGIASSXXXXXXXXXXXAQKRASRILGCLR 250
E +L+ + R EAG +++AS+IL +R
Sbjct: 461 ENCVAVLLTLCQGNLRFRGLASEAGAEEVLMEVEENGNERVKEKASKILLAMR 513
>AT4G16490.1 | Symbols: | ARM repeat superfamily protein |
chr4:9293891-9295530 REVERSE LENGTH=472
Length = 472
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 118/252 (46%), Gaps = 19/252 (7%)
Query: 3 GAIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESREGPD 62
GAIQ L+ +L D +Q ++ ALLNL + +D NKA I GA+ ++ ++++ G +
Sbjct: 225 GAIQALIPLLRCN-DPWTQEHAVTALLNLSL-HDQNKAVIAAGGAIKSLVWVLKT--GTE 280
Query: 63 SSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALRAL 122
+S + L L+ L+ NK IG+ GAIP LV L N K+DAL L
Sbjct: 281 TSK-QNAACALLSLALLEENKGSIGACGAIPPLVSLLLN--------GSCRGKKDALTTL 331
Query: 123 FNLTIFQANVSFVLETDLVAFLVNAIGD--MEVSERVLSILGNLVSSPEGRKCISAVRDA 180
+ L Q N + V LV+ + + ++E+ + +L +L + +G++ I
Sbjct: 332 YKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMAEKAMVVLSSLAAIDDGKEAI-VEEGG 390
Query: 181 IPVLVDVLHWVDSPGCQEKASYILMIMAHKAYGDRQTMIEAGIASSXX--XXXXXXXXXA 238
I LV+ + G +E A L+ + + +R ++ G A
Sbjct: 391 IAALVEAIEDGSVKG-KEFAILTLLQLCSDSVRNRGLLVREGAIPPLVGLSQSGSVSVRA 449
Query: 239 QKRASRILGCLR 250
+++A R+LG LR
Sbjct: 450 KRKAERLLGYLR 461
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 124/259 (47%), Gaps = 23/259 (8%)
Query: 3 GAIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIES--REG 60
GAI LV +L D+ Q ++ LLNL I ++ NK I GA+ +++++E+ RE
Sbjct: 421 GAIPLLVQLLSYP-DSGIQENAVTTLLNLSI-DEVNKKLISNEGAIPNIIEILENGNREA 478
Query: 61 PDSSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALR 120
++S A LS LD NK IG S IP LV LQ+ K+DAL
Sbjct: 479 RENSA-----AALFSLSMLDENKVTIGLSNGIPPLVDLLQH--------GTLRGKKDALT 525
Query: 121 ALFNLTIFQANVSFVLETDLVAFLVNAIGDMEVS--ERVLSILGNLVSSPEGRKCISAVR 178
ALFNL++ AN ++ +V L+N + D + + LSIL L S PEGR+ I +
Sbjct: 526 ALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGRQAIGQL- 584
Query: 179 DAIPVLVDVLHWVDSPGCQEKASYILMIMAHKAYGDRQTMIEAGIASSXXXXXXXXXXXA 238
I LV+ + +P +E A+ +L+ + ++ G+ A
Sbjct: 585 SFIETLVEFIRQ-GTPKNKECATSVLLELGSNNSSFILAALQFGVYEYLVEITTSGTNRA 643
Query: 239 QKRASRILGCLRIDKGKQV 257
Q++A+ ++ I K +Q+
Sbjct: 644 QRKANALIQL--ISKSEQI 660
>AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 |
chr5:26048173-26049843 REVERSE LENGTH=556
Length = 556
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 107/243 (44%), Gaps = 29/243 (11%)
Query: 21 QIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIES--REGPDSSVCEAIVANFLGLSA 78
Q +L +L+NL + + NK IV++G V ++ +++S RE E LS
Sbjct: 283 QTNALASLVNLSL-DKKNKLTIVRLGFVPILIDVLKSGSREAQ-----EHAAGTIFSLSL 336
Query: 79 LDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALRALFNLTIFQANVSFVLET 138
D NK IG GA+ L+ L+ ++ + D+ AL++LT+ Q N S ++
Sbjct: 337 EDDNKMPIGVLGALQPLLHALRAAESDR-------TRHDSALALYHLTLNQTNRSKLVRL 389
Query: 139 DLVAFLVNAIGDMEVSERVLSILGNLVSSPEGRKCISAVRD--AIPVLVDVLH--WVDSP 194
V L + + E + R L ++ NL EGR SA+ D A+ +LV L W + P
Sbjct: 390 GAVPALFSMVRSGESASRALLVICNLACCSEGR---SAMLDANAVAILVGKLREEWTEEP 446
Query: 195 -------GCQEKASYILMIMAHKAYGDRQTMIEAGIASSXXXXXXXXXXXAQKRASRILG 247
+E L ++H++ + EA A+++A +IL
Sbjct: 447 TEARSSSSARENCVAALFALSHESLRFKGLAKEARAVEVLKEVEERGTERAREKAKKILQ 506
Query: 248 CLR 250
+R
Sbjct: 507 LMR 509
>AT4G12710.1 | Symbols: | ARM repeat superfamily protein |
chr4:7485040-7486733 REVERSE LENGTH=402
Length = 402
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 102/191 (53%), Gaps = 17/191 (8%)
Query: 3 GAIQPLVGMLDLEEDTHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESREGPD 62
G I PLV ML + ++ ASL ALLNL + N+ NK IVK GAV ++++++ +
Sbjct: 90 GVIPPLVPMLF-SSNVDARHASLLALLNLAVRNERNKIEIVKAGAVPPLIQILKLH---N 145
Query: 63 SSVCEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDEKXXXXXXHVKQDALRAL 122
+S+ E A L LSA +NK +I SSG P L++ L + K DA+ AL
Sbjct: 146 ASLRELATAAILTLSAAPANKAMIISSGVPPLLIQMLSS--------GTVQGKVDAVTAL 197
Query: 123 FNLTIFQANVSFVLETDLVAFLVNAIGDM----EVSERVLSILGNLVS-SPEGRKCISAV 177
NL+ + + +L+ V L++ + + + +E+ +++ ++S S +GR I++
Sbjct: 198 HNLSACKEYSAPILDAKAVYPLIHLLKECKKHSKFAEKATALVEMILSHSEDGRNAITSC 257
Query: 178 RDAIPVLVDVL 188
D I LV+ +
Sbjct: 258 EDGILTLVETV 268