Miyakogusa Predicted Gene

Lj1g3v1798720.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1798720.3 tr|A5AU42|A5AU42_VITVI Glutamate receptor
OS=Vitis vinifera GN=VITISV_040422 PE=3 SV=1,55.43,4e-19,no
description,NULL; GLUTAMATE RECEPTOR 2 PLANT,NULL; IONOTROPIC
GLUTAMATE RECEPTOR,NULL; Periplasmi,CUFF.27959.3
         (124 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G29120.1 | Symbols: ATGLR2.7, GLR2.7 | glutamate receptor 2.7...   110   2e-25
AT2G29110.1 | Symbols: ATGLR2.8, GLR2.8 | glutamate receptor 2.8...   104   2e-23
AT5G27100.1 | Symbols: ATGLR2.1, GLR2.1 | glutamate receptor 2.1...   102   8e-23
AT2G29100.1 | Symbols: ATGLR2.9, GLR2.9 | glutamate receptor 2.9...    98   1e-21
AT2G24720.1 | Symbols: ATGLR2.2, GLR2.2 | glutamate receptor 2.2...    88   1e-18
AT4G31710.1 | Symbols: ATGLR2.4, GLR2.4 | glutamate receptor 2.4...    87   2e-18
AT5G11180.1 | Symbols: ATGLR2.6, GLR2.6 | glutamate receptor 2.6...    87   4e-18
AT3G07520.1 | Symbols: ATGLR1.4, GLR1.4 | glutamate receptor 1.4...    85   1e-17
AT2G24710.1 | Symbols: ATGLR2.3, GLR2.3 | glutamate receptor 2.3...    84   2e-17
AT5G48410.1 | Symbols: ATGLR1.3, GLR1.3 | glutamate receptor 1.3...    72   1e-13
AT5G48400.2 | Symbols: ATGLR1.2, GLR1.2 | Glutamate receptor fam...    71   2e-13
AT5G48400.1 | Symbols: ATGLR1.2, GLR1.2 | Glutamate receptor fam...    70   3e-13
AT3G04110.1 | Symbols: GLR1, ATGLR1.1, GLR1.1 | glutamate recept...    68   1e-12

>AT2G29120.1 | Symbols: ATGLR2.7, GLR2.7 | glutamate receptor 2.7 |
           chr2:12511479-12515893 REVERSE LENGTH=952
          Length = 952

 Score =  110 bits (276), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/114 (49%), Positives = 77/114 (67%), Gaps = 3/114 (2%)

Query: 11  FVYFLIIFYSWSLSFIMNMGMAQRNETTVVKVGGVIDLTGMVGKMGLSCINMSLSDFYHS 70
           F+Y+ ++F      F++  G   +N+TT +KVG V+DL     K+ L+ IN+SLSDFY  
Sbjct: 13  FMYYFVLFVC---GFVLMEGCLGQNQTTEIKVGVVLDLHTSFSKLCLTSINISLSDFYKY 69

Query: 71  HSHYNTRIQFSFRDSHGDVVTAAAQALELIQNEQVQAILGPVTTMEANFMIRLG 124
           HS Y TR+    RDS  DVV A++ AL+LI+NEQV AI+GP T+M+A FMIRL 
Sbjct: 70  HSDYTTRLAIHIRDSMEDVVQASSAALDLIKNEQVSAIIGPRTSMQAEFMIRLA 123


>AT2G29110.1 | Symbols: ATGLR2.8, GLR2.8 | glutamate receptor 2.8 |
           chr2:12506880-12510552 REVERSE LENGTH=947
          Length = 947

 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/112 (45%), Positives = 74/112 (66%), Gaps = 7/112 (6%)

Query: 13  YFLIIFYSWSLSFIMNMGMAQRNETTVVKVGGVIDLTGMVGKMGLSCINMSLSDFYHSHS 72
           YF+ +F       ++ +G+ Q N+ + +KVG V+DL     K+ L+ IN++LSDFY  H 
Sbjct: 13  YFVCLF------LLLEVGLGQ-NQISEIKVGVVLDLNTTFSKICLTSINLALSDFYKDHP 65

Query: 73  HYNTRIQFSFRDSHGDVVTAAAQALELIQNEQVQAILGPVTTMEANFMIRLG 124
           +Y TR+    RDS  D V A+A AL+LIQNEQV AI+GP+ +M+A FMI+L 
Sbjct: 66  NYRTRLALHVRDSMKDTVQASAAALDLIQNEQVSAIIGPIDSMQAKFMIKLA 117


>AT5G27100.1 | Symbols: ATGLR2.1, GLR2.1 | glutamate receptor 2.1 |
           chr5:9535160-9538311 REVERSE LENGTH=901
          Length = 901

 Score =  102 bits (253), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 55/100 (55%), Positives = 67/100 (67%), Gaps = 1/100 (1%)

Query: 25  FIMNMGMAQRNETTVVKVGGVIDLTGMVGKMGLSCINMSLSDFYHSHSHYNTRIQFSFRD 84
           F+M +G AQ N  T V VG V D+      M L CINMSLSDFY SH    TR+  +  D
Sbjct: 18  FLMQVGEAQ-NRITNVNVGIVNDIGTAYSNMTLLCINMSLSDFYSSHPETQTRLVTTVVD 76

Query: 85  SHGDVVTAAAQALELIQNEQVQAILGPVTTMEANFMIRLG 124
           S  DVVTAAA AL+LI N++V+AILGP T+M+A FMI +G
Sbjct: 77  SKNDVVTAAAAALDLITNKEVKAILGPWTSMQAQFMIEMG 116


>AT2G29100.1 | Symbols: ATGLR2.9, GLR2.9 | glutamate receptor 2.9 |
           chr2:12501092-12504912 REVERSE LENGTH=940
          Length = 940

 Score = 98.2 bits (243), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 47/100 (47%), Positives = 69/100 (69%), Gaps = 1/100 (1%)

Query: 25  FIMNMGMAQRNETTVVKVGGVIDLTGMVGKMGLSCINMSLSDFYHSHSHYNTRIQFSFRD 84
            +M +G+ Q N+T+ +KVG V+DL     K+ L+ I M++SDFY  H +Y TR+    RD
Sbjct: 16  LLMGVGLGQ-NQTSEIKVGVVLDLNTTFSKICLTSIKMAVSDFYADHPNYLTRLTLHVRD 74

Query: 85  SHGDVVTAAAQALELIQNEQVQAILGPVTTMEANFMIRLG 124
           S  D V A+A AL+LI+ EQV AI+GP+ +M+A+FMI+L 
Sbjct: 75  SMEDTVQASAAALDLIKTEQVSAIIGPINSMQADFMIKLA 114


>AT2G24720.1 | Symbols: ATGLR2.2, GLR2.2 | glutamate receptor 2.2 |
           chr2:10522783-10525840 REVERSE LENGTH=920
          Length = 920

 Score = 87.8 bits (216), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 61/93 (65%)

Query: 32  AQRNETTVVKVGGVIDLTGMVGKMGLSCINMSLSDFYHSHSHYNTRIQFSFRDSHGDVVT 91
            Q N  T V +G V D+      + + CINMSL+DFY S   + TR+  +  DS  DVV 
Sbjct: 24  GQDNGKTQVNIGVVSDVGTSYPDVAMLCINMSLADFYSSRPQFQTRLVVNVGDSKNDVVG 83

Query: 92  AAAQALELIQNEQVQAILGPVTTMEANFMIRLG 124
           AA  A++LI+N+QV+AILGP T+M+A+F+I +G
Sbjct: 84  AATAAIDLIKNKQVKAILGPWTSMQAHFLIEIG 116


>AT4G31710.1 | Symbols: ATGLR2.4, GLR2.4 | glutamate receptor 2.4 |
           chr4:15349121-15352962 FORWARD LENGTH=898
          Length = 898

 Score = 87.4 bits (215), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 71/122 (58%), Gaps = 7/122 (5%)

Query: 3   KNHQHPTKFVYFLIIFYSWSLSFIMNMGMAQRNETTVVKVGGVIDLTGMVGKMGLSCINM 62
           K H +    V+ + IF        + +G  Q     V+ VG V D+      + L  INM
Sbjct: 25  KRHLNDVVLVFLVFIFG-------VKLGKGQNTTIQVINVGVVTDVGTTASNLSLLAINM 77

Query: 63  SLSDFYHSHSHYNTRIQFSFRDSHGDVVTAAAQALELIQNEQVQAILGPVTTMEANFMIR 122
           SLSDFY S     TR+  +F DS  DVV AAA AL+LI+N++V+AILGP TTM+A+F+I 
Sbjct: 78  SLSDFYSSRPESRTRLLLNFADSRDDVVGAAAAALDLIKNKEVKAILGPRTTMQASFVIE 137

Query: 123 LG 124
           +G
Sbjct: 138 VG 139


>AT5G11180.1 | Symbols: ATGLR2.6, GLR2.6 | glutamate receptor 2.6 |
           chr5:3557261-3561575 REVERSE LENGTH=906
          Length = 906

 Score = 86.7 bits (213), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 74/121 (61%), Gaps = 5/121 (4%)

Query: 4   NHQHPTKFVYFLIIFYSWSLSFIMNMGMAQRNETTVVKVGGVIDLTGMVGKMGLSCINMS 63
           NH        +L+ F    ++F++ +G +Q+ E   V+VG V+D    +  + L  INMS
Sbjct: 5   NHLLSRALPLWLLFF----INFLVLLGKSQQ-EVLQVQVGIVLDTNATLAALSLRAINMS 59

Query: 64  LSDFYHSHSHYNTRIQFSFRDSHGDVVTAAAQALELIQNEQVQAILGPVTTMEANFMIRL 123
           LS+FY++H+ + TRI  + RDS   VV AAA AL LI+  +V AI+GP  +M+A F+I L
Sbjct: 60  LSEFYNTHNGFKTRIVLNIRDSKRTVVGAAASALYLIKKREVVAIIGPGNSMQAPFLINL 119

Query: 124 G 124
           G
Sbjct: 120 G 120


>AT3G07520.1 | Symbols: ATGLR1.4, GLR1.4 | glutamate receptor 1.4 |
           chr3:2395121-2398291 REVERSE LENGTH=861
          Length = 861

 Score = 85.1 bits (209), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/120 (39%), Positives = 73/120 (60%), Gaps = 8/120 (6%)

Query: 13  YFLIIFYSWSLSFIMNM-GMAQRNETTV-------VKVGGVIDLTGMVGKMGLSCINMSL 64
           YFL IF+   +SF +   G  Q++           V++G V+D+  M GK+  + I+M+L
Sbjct: 11  YFLTIFFLAFISFAVTCSGTNQKDNVDRLPVVYEDVRIGLVVDMGSMEGKLVTTSISMAL 70

Query: 65  SDFYHSHSHYNTRIQFSFRDSHGDVVTAAAQALELIQNEQVQAILGPVTTMEANFMIRLG 124
           SDFYH ++ Y TR+    RDSHGD + A A A++L+Q EQV+A++G  + +EA  +  LG
Sbjct: 71  SDFYHVNNGYRTRVSVLSRDSHGDPLQALAAAMDLLQTEQVEALVGGQSLLEAKNLAELG 130


>AT2G24710.1 | Symbols: ATGLR2.3, GLR2.3 | glutamate receptor 2.3 |
           chr2:10516880-10520549 REVERSE LENGTH=895
          Length = 895

 Score = 84.3 bits (207), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 5/114 (4%)

Query: 11  FVYFLIIFYSWSLSFIMNMGMAQRNETTVVKVGGVIDLTGMVGKMGLSCINMSLSDFYHS 70
           F   L++F+     F +     Q N  T+V VG V D+     K+ + CINMS+SDFY S
Sbjct: 7   FFCILLVFF-----FCLEFNRGQNNGKTLVDVGVVTDVDTSHSKVVMLCINMSISDFYSS 61

Query: 71  HSHYNTRIQFSFRDSHGDVVTAAAQALELIQNEQVQAILGPVTTMEANFMIRLG 124
           +  + TR+  +  DS  DVV AA  AL+LI+N+QV+AILGP T+M+A+F+I +G
Sbjct: 62  NPQFETRLVVNVGDSKSDVVGAAIAALDLIKNKQVKAILGPWTSMQAHFLIEIG 115


>AT5G48410.1 | Symbols: ATGLR1.3, GLR1.3 | glutamate receptor 1.3 |
           chr5:19620316-19623277 FORWARD LENGTH=860
          Length = 860

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 57/85 (67%)

Query: 40  VKVGGVIDLTGMVGKMGLSCINMSLSDFYHSHSHYNTRIQFSFRDSHGDVVTAAAQALEL 99
           ++VG V+DL  + GK+  + ++M+LS FY  H+ Y TR+  S R+SHG+ + A A A++L
Sbjct: 42  IRVGLVLDLGSLKGKIVKNSVSMALSYFYAIHNDYKTRVSVSLRNSHGEPLLALASAVDL 101

Query: 100 IQNEQVQAILGPVTTMEANFMIRLG 124
           ++ E V+AI+G  + +EA  +  LG
Sbjct: 102 LKTEGVEAIIGGNSLLEAKLLGELG 126


>AT5G48400.2 | Symbols: ATGLR1.2, GLR1.2 | Glutamate receptor family
           protein | chr5:19616244-19619246 FORWARD LENGTH=867
          Length = 867

 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 49/71 (69%)

Query: 40  VKVGGVIDLTGMVGKMGLSCINMSLSDFYHSHSHYNTRIQFSFRDSHGDVVTAAAQALEL 99
           V+VG V+DL  + GK+  S ++M+LSDFY +H+ Y TR+    RDSHG+ + A    ++L
Sbjct: 40  VRVGLVLDLGSVEGKIVRSSVSMALSDFYDNHNDYKTRLSLLVRDSHGEPLLALDSVVDL 99

Query: 100 IQNEQVQAILG 110
           +Q E VQAI+G
Sbjct: 100 LQTEGVQAIIG 110


>AT5G48400.1 | Symbols: ATGLR1.2, GLR1.2 | Glutamate receptor family
           protein | chr5:19616244-19618805 FORWARD LENGTH=750
          Length = 750

 Score = 70.5 bits (171), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 49/71 (69%)

Query: 40  VKVGGVIDLTGMVGKMGLSCINMSLSDFYHSHSHYNTRIQFSFRDSHGDVVTAAAQALEL 99
           V+VG V+DL  + GK+  S ++M+LSDFY +H+ Y TR+    RDSHG+ + A    ++L
Sbjct: 40  VRVGLVLDLGSVEGKIVRSSVSMALSDFYDNHNDYKTRLSLLVRDSHGEPLLALDSVVDL 99

Query: 100 IQNEQVQAILG 110
           +Q E VQAI+G
Sbjct: 100 LQTEGVQAIIG 110


>AT3G04110.1 | Symbols: GLR1, ATGLR1.1, GLR1.1 | glutamate receptor
           1.1 | chr3:1077361-1080236 FORWARD LENGTH=808
          Length = 808

 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 52/81 (64%)

Query: 40  VKVGGVIDLTGMVGKMGLSCINMSLSDFYHSHSHYNTRIQFSFRDSHGDVVTAAAQALEL 99
           V+VG V+DL+ + GK+  +  N++LSDFY  ++ Y TR+    RDS GD + A A A +L
Sbjct: 30  VRVGLVVDLSSIQGKILETSFNLALSDFYGINNGYRTRVSVLVRDSQGDPIIALAAATDL 89

Query: 100 IQNEQVQAILGPVTTMEANFM 120
           ++N + +AI+G  +  EA  +
Sbjct: 90  LKNAKAEAIVGAQSLQEAKLL 110