Miyakogusa Predicted Gene

Lj1g3v1788400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1788400.1 Non Chatacterized Hit- tr|I1P4V6|I1P4V6_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,63.01,7e-17,seg,NULL; DUF1771,Domain of unknown function
DUF1771,CUFF.27946.1
         (489 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26280.1 | Symbols: CID7 | CTC-interacting domain 7 | chr2:11...   451   e-127

>AT2G26280.1 | Symbols: CID7 | CTC-interacting domain 7 |
           chr2:11188143-11190579 REVERSE LENGTH=567
          Length = 567

 Score =  451 bits (1160), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/474 (51%), Positives = 312/474 (65%), Gaps = 15/474 (3%)

Query: 19  KATSLNPNAAEFIPFALRXXXXXXXXXXXXXXKLTTFGAHGKSVLGRXXXXXXXXXXXXV 78
           K T+LNP+AAEF+PF LR               L +  + GK+VL R             
Sbjct: 18  KPTTLNPHAAEFVPFTLRSPSSGGTSTLDTRL-LASSSSVGKAVLDRTESSASHHSDEEA 76

Query: 79  HQYWRCQLPDDITPDFEVMGEDE-SQGVNDLSLIGLSIHDDNETSTFPSSIGNRYKINEQ 137
            Q+W  QLPDDITPDF +M +D+ S G   LSL  LS+ D NE   FPS+ G  Y  ++Q
Sbjct: 77  RQFWSHQLPDDITPDFGLMTQDDNSYGSGSLSLANLSLFDGNEAEKFPSASGG-YGFSDQ 135

Query: 138 EELSQQHFNGNNFADKFKLSNSSYSEDPSSASFLNTLAKPWDRPIGSVNQHISSGLEGLN 197
             L+  + NGN+ ADK +   SS+ EDP   SF+    KPWD+ I +  Q + +  E   
Sbjct: 136 TGLASHNANGNSLADKSRYPISSFGEDPQRQSFMQLSPKPWDKQIMNAEQLLGNDRERNP 195

Query: 198 SDDNSRHGFLDDVLAENAIVDDTNLNPLEFLASLFPGFAAESLAEVYFANGCNLHLTSEM 257
               SRHGF++D++ E+    D  +NP++FLAS FPGFAAESLAEVYFANGC+L LT EM
Sbjct: 196 FSGKSRHGFVNDMITESP--GDMEVNPVDFLASQFPGFAAESLAEVYFANGCDLQLTIEM 253

Query: 258 LTQL--QDDGSFNQNPNSKTLSAPNLSAMDFPALASSDGQTASTKYGVDNVYRSGNPYRS 315
           LTQL  Q DG  NQN + KT + P+L+ MDFPAL+ S+      ++G D++ ++GN Y+S
Sbjct: 254 LTQLELQVDGGLNQNISPKTYAPPSLTPMDFPALSISNSHGIPAQFGGDDLQQTGNHYQS 313

Query: 316 SDND-MLFFKSRSSVPSRGAIDFAAASRKLASQDSGVWKYDRNGFGDTAIGSTRSSNVLA 374
            + D M FFKS  SV   GAID+ +A RKLASQDSG+WKY+RN   D++IGS+R+S    
Sbjct: 314 PEKDNMFFFKSGPSVSQPGAIDYVSAVRKLASQDSGMWKYERNDSADSSIGSSRNSGA-- 371

Query: 375 SGFTSGQGRVNSGDRLQKRGSAREAAVWLETGDLVANMHSELREEACDHARLRNAYFEQA 434
             + SG+GR    D+LQ R   R A VW+ETGD V NM+SELREEA D+ARLRN YFEQA
Sbjct: 372 --YKSGRGRSIYSDKLQSRAQTRPAPVWVETGDAVGNMYSELREEARDYARLRNVYFEQA 429

Query: 435 QQAYLIGNKALAKELSVKGQLHDMHMEAAHGKAQESIYHQRNPVAPEMRGNGRG 488
           +QAYL+GNKALAKELSVKGQLH+M M+AAHGKAQE+IY QRNPV    +GN RG
Sbjct: 430 RQAYLVGNKALAKELSVKGQLHNMQMKAAHGKAQEAIYRQRNPVG---QGNSRG 480