Miyakogusa Predicted Gene

Lj1g3v1788380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1788380.1 tr|A9S7E1|A9S7E1_PHYPA Ctr family transporter
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_1,42.66,8e-19,COPPER TRANSPORTER,NULL; SOLUTE CARRIER
FAMILY 31 (COPPER TRANSPORTERS),Ctr copper transporter;
seg,,CUFF.27949.1
         (143 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G20650.1 | Symbols: COPT5 | copper transporter 5 | chr5:69854...   142   8e-35
AT5G59040.1 | Symbols: COPT3 | copper transporter 3 | chr5:23836...    71   3e-13
AT2G26975.1 | Symbols:  | Ctr copper transporter family | chr2:1...    70   4e-13
AT3G46900.1 | Symbols: COPT2 | copper transporter 2 | chr3:17268...    56   8e-09
AT2G37925.1 | Symbols: COPT4 | copper transporter 4 | chr2:15870...    55   1e-08
AT5G59030.1 | Symbols: COPT1 | copper transporter 1 | chr5:23833...    51   3e-07

>AT5G20650.1 | Symbols: COPT5 | copper transporter 5 |
           chr5:6985481-6985921 REVERSE LENGTH=146
          Length = 146

 Score =  142 bits (358), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 76/150 (50%), Positives = 90/150 (60%), Gaps = 11/150 (7%)

Query: 1   MMHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPV 60
           MMHMTFYWG K TILFD WKTDSW SYIL+L+ACF+ + FYQ LENRRI+ K  ++ +  
Sbjct: 1   MMHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRA 60

Query: 61  PLE------IETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVA 114
           P        +  PLI +                +LFGV++ IGYLLMLA MSFNGGVF+A
Sbjct: 61  PPPPRSSSGVSAPLIPKSGTRSAAKAASV----LLFGVNAAIGYLLMLAAMSFNGGVFIA 116

Query: 115 IVVGLAFGYFFFRXXX-XXXXXXXXXCACA 143
           IVVGL  GY  FR             C CA
Sbjct: 117 IVVGLTAGYAVFRSDDGGADTATDDPCPCA 146


>AT5G59040.1 | Symbols: COPT3 | copper transporter 3 |
           chr5:23836724-23837179 FORWARD LENGTH=151
          Length = 151

 Score = 70.9 bits (172), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 62/126 (49%), Gaps = 23/126 (18%)

Query: 1   MMHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPV 60
           MMHMTF+WGK   +LFD W   S   Y + L   F+I+ F + L     R     +G   
Sbjct: 29  MMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLS----RCGFMKSG--- 81

Query: 61  PLEIETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGLA 120
           P  +   L++                + ++ V + + YL+MLAVMSFNGGVFVA + G  
Sbjct: 82  PASLGGGLLQ----------------TAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFG 125

Query: 121 FGYFFF 126
            G+  F
Sbjct: 126 LGFMIF 131


>AT2G26975.1 | Symbols:  | Ctr copper transporter family |
           chr2:11512992-11513429 FORWARD LENGTH=145
          Length = 145

 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 22/126 (17%)

Query: 1   MMHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPV 60
           MMHMTF+WGK   ILF  W   S   Y+L L+  F++AV  + L +  I     +  +  
Sbjct: 24  MMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRGSTSRAK 83

Query: 61  PLEIETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGLA 120
            L                        + ++ + +G+ YL+MLAVMSFNGGVF+  + G A
Sbjct: 84  GL----------------------VQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFA 121

Query: 121 FGYFFF 126
            G+  F
Sbjct: 122 VGFMLF 127


>AT3G46900.1 | Symbols: COPT2 | copper transporter 2 |
           chr3:17268887-17269363 FORWARD LENGTH=158
          Length = 158

 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 22/121 (18%)

Query: 6   FYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPVPLEIE 65
           F+WGK   +LF  W   S   Y L L+  F++AV  + L +                   
Sbjct: 34  FFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAH------------------- 74

Query: 66  TPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGLAFGYFF 125
           +P++R                + ++ + +G+ YL+MLAVMSFN GVF+  + G   G+F 
Sbjct: 75  SPILR---VSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFFL 131

Query: 126 F 126
           F
Sbjct: 132 F 132


>AT2G37925.1 | Symbols: COPT4 | copper transporter 4 |
           chr2:15870258-15870695 REVERSE LENGTH=145
          Length = 145

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 20/127 (15%)

Query: 1   MMHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPV 60
           ++H TFYWG    +LF  W       Y L+L+  F +A   + L     R    ++ K  
Sbjct: 29  LLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLA----RCSDASSIKQG 84

Query: 61  PLEIETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGLA 120
             ++     R                + ++ V SG  YL++LAV+SFNGGVF+A + G A
Sbjct: 85  ADKLAKVAFR----------------TAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHA 128

Query: 121 FGYFFFR 127
            G+  FR
Sbjct: 129 LGFAVFR 135


>AT5G59030.1 | Symbols: COPT1 | copper transporter 1 |
           chr5:23833945-23834457 REVERSE LENGTH=170
          Length = 170

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 20/122 (16%)

Query: 5   TFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPVPLEI 64
           TF+WGK   +LF  W   S   Y L L+  F +AV  + L +  +               
Sbjct: 45  TFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLL-------------- 90

Query: 65  ETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGLAFGYF 124
                 R               + ++ +  G+ YL+MLAVMSFN GVF+  + G A G+ 
Sbjct: 91  ------RGSTGDSANRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFM 144

Query: 125 FF 126
            F
Sbjct: 145 LF 146