Miyakogusa Predicted Gene
- Lj1g3v1787970.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1787970.1 Non Chatacterized Hit- tr|G7LIE3|G7LIE3_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,67.19,4e-19,DUF659,Domain of unknown function DUF659;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.27921.1
(65 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G17450.1 | Symbols: | hAT dimerisation domain-containing pro... 69 8e-13
AT1G36095.1 | Symbols: | DNA binding | chr1:13491370-13492725 R... 67 2e-12
AT3G22220.2 | Symbols: | hAT transposon superfamily | chr3:7839... 67 3e-12
AT3G22220.1 | Symbols: | hAT transposon superfamily | chr3:7839... 67 3e-12
AT4G15020.2 | Symbols: | hAT transposon superfamily | chr4:8575... 62 9e-11
AT4G15020.1 | Symbols: | hAT transposon superfamily | chr4:8575... 62 9e-11
AT5G31412.1 | Symbols: | hAT transposon superfamily protein | c... 54 2e-08
AT1G79740.1 | Symbols: | hAT transposon superfamily | chr1:3000... 50 2e-07
AT1G43260.1 | Symbols: | hAT transposon superfamily protein | c... 45 8e-06
>AT3G17450.1 | Symbols: | hAT dimerisation domain-containing
protein | chr3:5972793-5975684 REVERSE LENGTH=877
Length = 877
Score = 68.6 bits (166), Expect = 8e-13, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 42/58 (72%)
Query: 2 LEDAINYVGAENGVQVVTDNAANYKAAGEKLMQTIDHLYWTPCAAHCIDLILEDFEKI 59
L+ ++ +G EN VQV+T N A +++AG+ L + +LYWTPCA HC +L+LEDF K+
Sbjct: 423 LDKLVDDIGEENVVQVITQNTAIFRSAGKLLEEKRKNLYWTPCAIHCTELVLEDFSKL 480
>AT1G36095.1 | Symbols: | DNA binding | chr1:13491370-13492725
REVERSE LENGTH=301
Length = 301
Score = 67.4 bits (163), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 42/64 (65%)
Query: 2 LEDAINYVGAENGVQVVTDNAANYKAAGEKLMQTIDHLYWTPCAAHCIDLILEDFEKILN 61
L+ ++ VG N V+VV DNA+NY A + M HLYWTPCAAHCI L+LED KI
Sbjct: 146 LDLMVDEVGEANVVKVVIDNASNYVKASQLSMANRPHLYWTPCAAHCIYLMLEDIGKISE 205
Query: 62 VYSL 65
V ++
Sbjct: 206 VKTV 209
>AT3G22220.2 | Symbols: | hAT transposon superfamily |
chr3:7839808-7842358 REVERSE LENGTH=761
Length = 761
Score = 66.6 bits (161), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 1 MLEDAINYVGAENGVQVVTDNAANYKAAGEKLMQTIDHLYWTPCAAHCIDLILEDFEKI 59
+L++ + +G N VQV+T +Y AAG+KLM LYW PCAAHCID +LE+F K+
Sbjct: 310 LLKEVVEEIGDTNVVQVITKCEDHYAAAGKKLMDVYPSLYWVPCAAHCIDKMLEEFGKM 368
>AT3G22220.1 | Symbols: | hAT transposon superfamily |
chr3:7839808-7842358 REVERSE LENGTH=761
Length = 761
Score = 66.6 bits (161), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 1 MLEDAINYVGAENGVQVVTDNAANYKAAGEKLMQTIDHLYWTPCAAHCIDLILEDFEKI 59
+L++ + +G N VQV+T +Y AAG+KLM LYW PCAAHCID +LE+F K+
Sbjct: 310 LLKEVVEEIGDTNVVQVITKCEDHYAAAGKKLMDVYPSLYWVPCAAHCIDKMLEEFGKM 368
>AT4G15020.2 | Symbols: | hAT transposon superfamily |
chr4:8575806-8578372 FORWARD LENGTH=768
Length = 768
Score = 61.6 bits (148), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 1 MLEDAINYVGAENGVQVVTDNAANYKAAGEKLMQTIDHLYWTPCAAHCIDLILEDFEKI 59
+L + + VG+ N VQV+T Y AG++LM LYW PCAAHCID +LE+F K+
Sbjct: 314 LLSELVEEVGSTNVVQVITKCDDYYVDAGKRLMLVYPSLYWVPCAAHCIDQMLEEFGKL 372
>AT4G15020.1 | Symbols: | hAT transposon superfamily |
chr4:8575806-8578372 FORWARD LENGTH=768
Length = 768
Score = 61.6 bits (148), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 1 MLEDAINYVGAENGVQVVTDNAANYKAAGEKLMQTIDHLYWTPCAAHCIDLILEDFEKI 59
+L + + VG+ N VQV+T Y AG++LM LYW PCAAHCID +LE+F K+
Sbjct: 314 LLSELVEEVGSTNVVQVITKCDDYYVDAGKRLMLVYPSLYWVPCAAHCIDQMLEEFGKL 372
>AT5G31412.1 | Symbols: | hAT transposon superfamily protein |
chr5:11541463-11543768 REVERSE LENGTH=433
Length = 433
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 9 VGAENGVQVVTDNAANYKAAGEKLMQTIDHLYWTPCAAHCIDLILEDFEKI 59
VGA+N VQVVTDNA N A + L + +++WT C AH +DL+LE K+
Sbjct: 189 VGAKNVVQVVTDNALNNVTAAKMLKEKRPNIFWTGCVAHTVDLMLEAISKL 239
>AT1G79740.1 | Symbols: | hAT transposon superfamily |
chr1:30004367-30006715 REVERSE LENGTH=651
Length = 651
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 1 MLEDAINYVGAENGVQVVTDNAANYKAAGEKLMQTIDHLYWTPCAAHCIDLILEDFEKI 59
+ + I +G E+ VQ++ DN+ Y L+Q ++ +PCA+ C+++ILE+F K+
Sbjct: 225 LFDSVIQDIGQEHIVQIIMDNSFCYTGISNHLLQNYATIFVSPCASQCLNIILEEFSKV 283
>AT1G43260.1 | Symbols: | hAT transposon superfamily protein |
chr1:16318253-16319234 FORWARD LENGTH=294
Length = 294
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 3 EDAINYVGAENGVQVVTDNAANYKAAGEKLMQTIDHLYWTPCAAHCIDLILEDFEKI 59
E I +G ++ VQVVT+NA N A + L + ++WT CA H I+L++E K+
Sbjct: 158 EYCIKNLGGDHVVQVVTNNATNNITAAKLLKEVRPTIFWTFCATHTINLMVEGISKL 214