Miyakogusa Predicted Gene
- Lj1g3v1787940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1787940.1 Non Chatacterized Hit- tr|I1JU03|I1JU03_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,26.57,2e-18,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat; PPR:
p,CUFF.27919.1
(520 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 218 6e-57
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 2e-55
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 2e-55
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 3e-55
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 8e-54
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 201 8e-52
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 9e-52
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 201 1e-51
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 197 2e-50
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 4e-50
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 7e-50
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 7e-50
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 194 1e-49
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 1e-48
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 5e-48
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 2e-47
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 2e-47
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 3e-46
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 181 8e-46
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 9e-46
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 180 2e-45
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 5e-45
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 6e-45
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 176 2e-44
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 3e-44
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 5e-44
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 5e-44
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 8e-44
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 1e-43
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 2e-43
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 9e-43
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 5e-42
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 6e-42
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 6e-42
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 167 2e-41
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 6e-41
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 7e-41
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 8e-41
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 3e-40
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 3e-40
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 4e-40
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 162 4e-40
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 5e-40
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 6e-40
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 7e-40
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 8e-40
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 9e-40
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 3e-39
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 159 3e-39
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 6e-39
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 9e-39
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 1e-38
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 156 3e-38
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 4e-38
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 7e-38
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 6e-37
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 2e-36
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 3e-36
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 149 5e-36
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 1e-35
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 3e-35
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 6e-35
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 8e-35
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 143 3e-34
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 142 6e-34
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 4e-33
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 139 5e-33
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 2e-31
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 134 2e-31
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 131 9e-31
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 130 2e-30
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 6e-30
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 129 6e-30
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 7e-30
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 129 7e-30
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 9e-30
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 8e-27
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 5e-26
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 8e-26
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 9e-26
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 114 2e-25
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 108 7e-24
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 107 2e-23
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 104 1e-22
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 104 2e-22
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 103 2e-22
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 103 3e-22
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 100 4e-21
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 9e-21
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 99 9e-21
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-20
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 97 2e-20
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 97 3e-20
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 96 4e-20
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 5e-20
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 96 6e-20
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 94 2e-19
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 93 4e-19
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 4e-19
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 5e-19
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 91 2e-18
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 90 3e-18
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 6e-18
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 8e-18
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 88 1e-17
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 87 4e-17
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 86 4e-17
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 5e-17
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 86 5e-17
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 9e-17
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 85 1e-16
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 84 2e-16
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 6e-16
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 82 1e-15
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 81 2e-15
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 80 3e-15
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 80 4e-15
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 78 1e-14
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 78 2e-14
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 77 2e-14
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 77 3e-14
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 5e-14
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 76 5e-14
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 76 6e-14
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 76 6e-14
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 76 6e-14
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 76 7e-14
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 76 7e-14
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 75 1e-13
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 9e-13
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 9e-13
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 72 1e-12
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 72 1e-12
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 70 3e-12
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 70 5e-12
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 68 1e-11
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 7e-11
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 66 8e-11
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 65 8e-11
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 63 6e-10
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 7e-10
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 60 3e-09
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 58 2e-08
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 58 2e-08
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 58 2e-08
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 57 3e-08
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 57 4e-08
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 56 5e-08
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 54 2e-07
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 54 3e-07
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 54 4e-07
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 4e-07
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 51 2e-06
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-l... 50 3e-06
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 196/357 (54%), Gaps = 5/357 (1%)
Query: 158 NLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNT 214
N+ KA+ + E +PDVF Y +I GFCKM ++ A +V D MR + P+ +TYN
Sbjct: 139 NIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198
Query: 215 MIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQ 274
MI LC +G++D A++V N+ S +C+P V+T+T LI+ G V EAL M EM +
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLL-SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 275 GCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEA 334
G +P++ TYN +I G+C G VD A M+ + LKG + +V + +L+ G+ EE
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 335 IKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRV 394
K M +M S D +V YS+++ C+ GK EA+++L+ M K + P S++ +
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 395 LVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNL 454
E +L+ A+ L+ M GC P+ ++Y+ V+ LCK G+ E+ + + G +
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK-NGKADQALEIFGKLGEVGCSP 436
Query: 455 DATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
+++ YN + GD+ AL + +M+ ++ TY + + LC +G V E +
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 182/373 (48%), Gaps = 45/373 (12%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
I + RG + A+ ++ + P ++ ++ + V+ A + D+++ L
Sbjct: 200 IGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL 259
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAM 229
+PD+FTY T+IRG CK GMV+ A ++ + CEP+ I+YN ++ L +G+ +
Sbjct: 260 -KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQG-------------- 275
++ + S+ C P+VVT++ LI + G+++EA+N +K M+E+G
Sbjct: 319 KLMTKMF-SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 276 ---------------------CQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
C P++V YN ++ LC +G D+A + K+ G N
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
++ +M G A+ + EM+S G+D D Y+ +++ C+ G EA +L
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
+M + PSV ++N V ++E+A+ +L++M GC PN +Y+++I G+
Sbjct: 498 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
Query: 435 GR---MQLVEELV 444
R M+L +LV
Sbjct: 558 YRAEAMELANDLV 570
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 148/323 (45%), Gaps = 7/323 (2%)
Query: 97 DSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRA 154
D +L R K F + I G + A + G P +S N +L L+
Sbjct: 252 DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQ 311
Query: 155 NRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESAR---KVFDEMRCEPNAIT 211
+ + + ++ E +P+V TY+ +I C+ G +E A K+ E P+A +
Sbjct: 312 GKWEEGEKLMTKMFSEK-CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 212 YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM 271
Y+ +I C++G +D A+ S C PD+V + T++ K G+ +AL ++
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMI-SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 272 QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRS 331
E GC PN +YN + L SG+ A M+ +M GI + T SM+ C G
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489
Query: 332 EEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAV 391
+EA + + +M S V Y++++ +CK + +A+++L MV +P+ +++ +
Sbjct: 490 DEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVL 549
Query: 392 FRVLVAERKLEEAVLLLKNMPRM 414
+ EA+ L ++ R+
Sbjct: 550 IEGIGFAGYRAEAMELANDLVRI 572
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 135/322 (41%), Gaps = 70/322 (21%)
Query: 257 KRGEVQEALNCMKEMQEQGC----------------------------------QPNVVT 282
+ G E+L+ ++ M +G QP+V
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFA 160
Query: 283 YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC---------------- 326
YNALI G C +D+A R++ +MR K + T M+ C
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 327 -------------------MVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPS 367
+ G +EA+K M EM+SRG+ D+ Y+ I+ CK G
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 368 EAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI 427
A ++R + K +P V S+N + R L+ + K EE L+ M C PN ++YSI+I
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 428 CGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSF 487
LC+ G+++ L+ M + G DA Y+ L+ +C +G ++A++ + MI
Sbjct: 341 TTLCR-DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 488 LFNKDTYCTFVKELCAKGKVKE 509
L + Y T + LC GK +
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQ 421
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 2/219 (0%)
Query: 291 CLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDV 350
C SGN E+ ++ M KG +V T ++KGF + +A++ M E++ + DV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 351 KAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKN 410
AY+ ++N +CK+ + +A +L M +K P ++N + L + KL+ A+ +L
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 411 MPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDG 470
+ C P ++Y+I+I ++G + +L+ ML G D YN ++ G C++G
Sbjct: 219 LLSDNCQPTVITYTILIEA-TMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 471 DEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ A + V ++ K + +Y ++ L +GK +E
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 201/380 (52%), Gaps = 6/380 (1%)
Query: 133 KAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGM 192
K K P + +++G+L R ++ A+ + +++++ ++ PD YTT+I GFCK G
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL-PDTVVYTTLIDGFCKRGD 366
Query: 193 VESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
+ +A K F EM P+ +TY +I G C+ G+M A ++F+ K PD VTFT
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF-CKGLEPDSVTFT 425
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
LI+GY K G +++A M + GC PNVVTY LI+GLC G++D A ++ +M
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
G++ N+ T S++ G C G EEA+K + E + G++ D Y+ +++ YCK G+ +A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICG 429
IL+EM+ K ++P++ +FN + LE+ LL M G +PN +++ ++
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 430 LCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF 489
C ++ ++ + M G D Y L+ G+C+ + + A +M K F
Sbjct: 606 YC-IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 664
Query: 490 NKDTYCTFVKELCAKGKVKE 509
+ TY +K + K E
Sbjct: 665 SVSTYSVLIKGFLKRKKFLE 684
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 172/310 (55%), Gaps = 7/310 (2%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
I+ F GD+ A FH+ G P +++ ++ +A + A +++ ++ +A
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI-QAG 451
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAM 229
P+V TYTT+I G CK G ++SA ++ EM +PN TYN++++GLCK G ++ A+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
++ F E+ D VT+TTL+D Y K GE+ +A +KEM +G QP +VT+N L+ G
Sbjct: 512 KLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
CL G +++ +++++ M KGI N T S++K +C+ + A K+M SRG+ D
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
K Y +V +CK EA + +EM K SVS+++ + + + +K EA +
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 410 NMPRMGCSPN 419
M R G + +
Sbjct: 691 QMRREGLAAD 700
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/526 (26%), Positives = 248/526 (47%), Gaps = 28/526 (5%)
Query: 6 RKATVKPSSIVTTITSLLQTPDSEPLKK----FSC-YLTPSLVTQVIKNTHNPHHALFFF 60
+KA+V+ + V IT++++ +EPL++ + C + T L+ ++K + L FF
Sbjct: 49 KKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFF 108
Query: 61 NWA-SNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFG 119
+WA S N + A D+ ++ SL S S R KL+ + F+ F
Sbjct: 109 DWARSRRDSNLESLCIVIHLAVASKDLKVAQSLIS---SFWERP-KLN--VTDSFVQFFD 162
Query: 120 DRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEP--DV 177
+ + +K S P + VLV + A+ ++++++ LV
Sbjct: 163 -------LLVYTYKDWGSDPRVF--DVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSC 213
Query: 178 FTYTTMIRGFC-KMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
Y T + C K + F E+ N +YN +IH +C+ G + A +
Sbjct: 214 NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL-LLM 272
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNV 296
E K PDV++++T+++GY + GE+ + ++ M+ +G +PN Y ++I LC +
Sbjct: 273 ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL 332
Query: 297 DEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVI 356
EA+ S+M +GI + T+++ GFC G A K EM SR + DV Y+ I
Sbjct: 333 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 357 VNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGC 416
++ +C+IG EA + EM K ++P +F + +++A + +M + GC
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 417 SPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMAL 476
SPN ++Y+ +I GLCK +G + EL+ M + G + YN ++ G C+ G+ E A+
Sbjct: 453 SPNVVTYTTLIDGLCK-EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 477 KTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK--EEYLKRCVDNTL 520
K V + + TY T + C G++ +E LK + L
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 132/271 (48%), Gaps = 7/271 (2%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
+ I+ GD+ A H+ G P + N+++ L ++ + A + + +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-E 518
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMD 226
A + D TYTT++ +CK G ++ A+++ EM +P +T+N +++G C G ++
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
++ N + +K P+ TF +L+ Y R ++ A K+M +G P+ TY L
Sbjct: 579 DGEKLLN-WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
++G C + N+ EA + +M+ KG +V+T + ++KGF + EA + +M G+
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMV 377
D + + + K +P V + E++
Sbjct: 698 AADKEIFDFFSDTKYKGKRPDTIVDPIDEII 728
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 201/380 (52%), Gaps = 6/380 (1%)
Query: 133 KAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGM 192
K K P + +++G+L R ++ A+ + +++++ ++ PD YTT+I GFCK G
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL-PDTVVYTTLIDGFCKRGD 366
Query: 193 VESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
+ +A K F EM P+ +TY +I G C+ G+M A ++F+ K PD VTFT
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF-CKGLEPDSVTFT 425
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
LI+GY K G +++A M + GC PNVVTY LI+GLC G++D A ++ +M
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
G++ N+ T S++ G C G EEA+K + E + G++ D Y+ +++ YCK G+ +A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICG 429
IL+EM+ K ++P++ +FN + LE+ LL M G +PN +++ ++
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 430 LCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF 489
C ++ ++ + M G D Y L+ G+C+ + + A +M K F
Sbjct: 606 YC-IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 664
Query: 490 NKDTYCTFVKELCAKGKVKE 509
+ TY +K + K E
Sbjct: 665 SVSTYSVLIKGFLKRKKFLE 684
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 172/310 (55%), Gaps = 7/310 (2%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
I+ F GD+ A FH+ G P +++ ++ +A + A +++ ++ +A
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI-QAG 451
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAM 229
P+V TYTT+I G CK G ++SA ++ EM +PN TYN++++GLCK G ++ A+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
++ F E+ D VT+TTL+D Y K GE+ +A +KEM +G QP +VT+N L+ G
Sbjct: 512 KLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
CL G +++ +++++ M KGI N T S++K +C+ + A K+M SRG+ D
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
K Y +V +CK EA + +EM K SVS+++ + + + +K EA +
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 410 NMPRMGCSPN 419
M R G + +
Sbjct: 691 QMRREGLAAD 700
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/526 (26%), Positives = 248/526 (47%), Gaps = 28/526 (5%)
Query: 6 RKATVKPSSIVTTITSLLQTPDSEPLKK----FSC-YLTPSLVTQVIKNTHNPHHALFFF 60
+KA+V+ + V IT++++ +EPL++ + C + T L+ ++K + L FF
Sbjct: 49 KKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFF 108
Query: 61 NWA-SNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFG 119
+WA S N + A D+ ++ SL S S R KL+ + F+ F
Sbjct: 109 DWARSRRDSNLESLCIVIHLAVASKDLKVAQSLIS---SFWERP-KLN--VTDSFVQFFD 162
Query: 120 DRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEP--DV 177
+ + +K S P + VLV + A+ ++++++ LV
Sbjct: 163 -------LLVYTYKDWGSDPRVF--DVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSC 213
Query: 178 FTYTTMIRGFC-KMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
Y T + C K + F E+ N +YN +IH +C+ G + A +
Sbjct: 214 NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL-LLM 272
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNV 296
E K PDV++++T+++GY + GE+ + ++ M+ +G +PN Y ++I LC +
Sbjct: 273 ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL 332
Query: 297 DEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVI 356
EA+ S+M +GI + T+++ GFC G A K EM SR + DV Y+ I
Sbjct: 333 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 357 VNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGC 416
++ +C+IG EA + EM K ++P +F + +++A + +M + GC
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 417 SPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMAL 476
SPN ++Y+ +I GLCK +G + EL+ M + G + YN ++ G C+ G+ E A+
Sbjct: 453 SPNVVTYTTLIDGLCK-EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 477 KTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK--EEYLKRCVDNTL 520
K V + + TY T + C G++ +E LK + L
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 132/271 (48%), Gaps = 7/271 (2%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
+ I+ GD+ A H+ G P + N+++ L ++ + A + + +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-E 518
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMD 226
A + D TYTT++ +CK G ++ A+++ EM +P +T+N +++G C G ++
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
++ N + +K P+ TF +L+ Y R ++ A K+M +G P+ TY L
Sbjct: 579 DGEKLLN-WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
++G C + N+ EA + +M+ KG +V+T + ++KGF + EA + +M G+
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMV 377
D + + + K +P V + E++
Sbjct: 698 AADKEIFDFFSDTKYKGKRPDTIVDPIDEII 728
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 200/371 (53%), Gaps = 3/371 (0%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + C ++ R + A I ++++ + PDV TY MI G+CK G + +A
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKIL-EILEGSGAVPDVITYNVMISGYCKAGEINNALS 193
Query: 199 VFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
V D M P+ +TYNT++ LC G++ AM V +R + + C PDV+T+T LI+ +
Sbjct: 194 VLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ-RDCYPDVITYTILIEATCRD 252
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
V A+ + EM+++GC P+VVTYN L+ G+C G +DEA + ++ M G + NV T+
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
+L+ C GR +A K + +M+ +G V +++++N C+ G A+ IL +M
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Query: 379 KRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQ 438
+P+ S+N + E+K++ A+ L+ M GC P+ ++Y+ ++ LCK G+++
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK-DGKVE 431
Query: 439 LVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
E+++ + G + YN ++ G + G A+K + +M K + TY + V
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 499 KELCAKGKVKE 509
L +GKV E
Sbjct: 492 GGLSREGKVDE 502
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 198/396 (50%), Gaps = 11/396 (2%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
+ I F G R A + SG P ++ N ++ +A +N A ++ D++
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS- 199
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMD 226
V PDV TY T++R C G ++ A +V D M C P+ ITY +I C+ +
Sbjct: 200 ---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
AM++ + + + C PDVVT+ L++G K G + EA+ + +M GCQPNV+T+N +
Sbjct: 257 HAMKLLDEMRD-RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
+ +C +G +A+++++ M KG +V T ++ C G AI +++M G
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
+ +Y+ +++ +CK K A+ L MV++ P + ++N + L + K+E+AV
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGY 466
+L + GCSP ++Y+ VI GL K G+ +L+ M D Y+ L+GG
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKA-GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 467 CEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELC 502
+G + A+K ++ N T+ + + LC
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 206/412 (50%), Gaps = 40/412 (9%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALV 173
I+ + G+I A+ + S P ++ N +L L + ++ A + D++++
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVS-PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 174 EPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMR 230
PDV TYT +I C+ V A K+ DEMR C P+ +TYN +++G+CK+G +D A++
Sbjct: 237 -PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 231 VFNRFAES----------------------------------KSCRPDVVTFTTLIDGYS 256
N S K P VVTF LI+
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 257 KRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVA 316
++G + A++ +++M + GCQPN ++YN L+ G C +D A + +M +G ++
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 317 TNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREM 376
T +ML C G+ E+A++ + ++ S+G + Y+ +++ K GK +A+ +L EM
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 377 VAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGR 436
AK +KP +++++ L E K++EA+ RMG PN ++++ ++ GLCK +
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 437 MQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFL 488
+ ++ LV M+ G + T Y L+ G +G + AL+ + ++ +K +
Sbjct: 536 DRAIDFLV-FMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 171/329 (51%), Gaps = 8/329 (2%)
Query: 184 IRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKS 240
+R + G +E K + M P+ I T+I G C+ G+ A ++ E
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL-EILEGSG 167
Query: 241 CRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAK 300
PDV+T+ +I GY K GE+ AL+ + M P+VVTYN ++ LC SG + +A
Sbjct: 168 AVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 301 RMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEY 360
++ +M + +V T T +++ C A+K + EM RG DV Y+V+VN
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 361 CKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNF 420
CK G+ EA+ L +M + +P+V + N + R + + + +A LL +M R G SP+
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 421 LSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVY 480
++++I+I LC+ KG + +++ M Q G ++ YN LL G+C++ + A++ +
Sbjct: 345 VTFNILINFLCR-KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 481 DMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
M+ + + TY T + LC GKV++
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 121/229 (52%), Gaps = 10/229 (4%)
Query: 281 VTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKE 340
V N + + +G ++E + + M G ++ T++++GFC +G++ +A K ++
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 341 MVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERK 400
+ G DV Y+V+++ YCK G+ + A+S+L M + P V ++N + R L K
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 401 LEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG---RMQLVEELVSSMLQSGHNLDAT 457
L++A+ +L M + C P+ ++Y+I+I C+ G M+L++E M G D
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDE----MRDRGCTPDVV 275
Query: 458 MYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGK 506
YN L+ G C++G + A+K + DM N T+ ++ +C+ G+
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 159/536 (29%), Positives = 261/536 (48%), Gaps = 45/536 (8%)
Query: 14 SIVTTITSLLQTPD---SEPLKKFSCYLTPSLVTQVIKNTHNPHHALFFFNWASNPQPNP 70
S+ + S+L P+ S LK ++PS V+ + +P AL F +W S NP
Sbjct: 61 SVPHRLLSILSKPNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQ---NP 117
Query: 71 NNYSHPRSCYAAITDVLLSHS-----------LFSTADS---------LLRRSNKLSDF- 109
Y H YA++ +L+++ + + DS L R+ NK F
Sbjct: 118 R-YKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFE 176
Query: 110 LASKFI--------NAFGDRG--DIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNL 159
L K I N+ G D ++ P + N ++ + V
Sbjct: 177 LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEE 236
Query: 160 AKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMI 216
A ++V EA ++PD FTYT++I G+C+ ++SA KVF+EM C N + Y +I
Sbjct: 237 ANQYVSKIV-EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI 295
Query: 217 HGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGC 276
HGLC +D AM +F + + + C P V T+T LI EALN +KEM+E G
Sbjct: 296 HGLCVARRIDEAMDLFVKMKDDE-CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI 354
Query: 277 QPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIK 336
+PN+ TY LI+ LC ++A+ ++ +M KG+ NV T +++ G+C G E+A+
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Query: 337 HMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLV 396
++ M SR + + + Y+ ++ YCK +A+ +L +M+ +++ P V ++N++
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 397 AERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDA 456
+ A LL M G P+ +Y+ +I LCK K R++ +L S+ Q G N +
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK-RVEEACDLFDSLEQKGVNPNV 532
Query: 457 TMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYL 512
MY L+ GYC+ G + A + M+ K+ L N T+ + LCA GK+KE L
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 174/321 (54%), Gaps = 11/321 (3%)
Query: 153 RANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNA 209
++ +NL K + +E ++P++ TYT +I C E AR++ +M + PN
Sbjct: 339 KSEALNLVKEM-----EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 210 ITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK 269
ITYN +I+G CK+G ++ A+ V ES+ P+ T+ LI GY K V +A+ +
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVV-ELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLN 451
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG 329
+M E+ P+VVTYN+LI+G C SGN D A R++S M +G+ + T TSM+ C
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 330 RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFN 389
R EEA + +G++ +V Y+ +++ YCK GK EA +L +M++K P+ +FN
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFN 571
Query: 390 AVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
A+ L A+ KL+EA LL + M ++G P + +I+I L K G ML
Sbjct: 572 ALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK-DGDFDHAYSRFQQMLS 630
Query: 450 SGHNLDATMYNCLLGGYCEDG 470
SG DA Y + YC +G
Sbjct: 631 SGTKPDAHTYTTFIQTYCREG 651
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 158/330 (47%), Gaps = 42/330 (12%)
Query: 160 AKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMI 216
A+ + Q++++ L+ P+V TY +I G+CK GM+E A V + M + PN TYN +I
Sbjct: 377 ARELLGQMLEKGLM-PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Query: 217 HGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRG----------------- 259
G CK + AM V N+ E K PDVVT+ +LIDG + G
Sbjct: 436 KGYCKSN-VHKAMGVLNKMLERK-VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 260 ------------------EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKR 301
V+EA + ++++G PNVV Y ALI+G C +G VDEA
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 302 MMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYC 361
M+ KM K N T +++ G C G+ +EA ++MV G+ V +++++
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 362 KIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFL 421
K G A S ++M++ KP ++ + E +L +A ++ M G SP+
Sbjct: 614 KDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Query: 422 SYSIVICGLCKVKGRMQLVEELVSSMLQSG 451
+YS +I G + G+ +++ M +G
Sbjct: 674 TYSSLIKGYGDL-GQTNFAFDVLKRMRDTG 702
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 175/367 (47%), Gaps = 25/367 (6%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ N+++ R+ + A + + LV PD +TYT+MI CK VE A
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV-PDQWTYTSMIDSLCKSKRVEEACD 518
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+FD + PN + Y +I G CK G++D A + + SK+C P+ +TF LI G
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML-SKNCLPNSLTFNALIHGL 577
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
G+++EA ++M + G QP V T LI L G+ D A +M G K +
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T T+ ++ +C GR +A M +M G+ D+ YS ++ Y +G+ + A +L+
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Query: 376 MVAKRMKPSVSSFNAVFRVLVAER------------------KLEEAVLLLKNMPRMGCS 417
M +PS +F ++ + L+ + + + V LL+ M +
Sbjct: 698 MRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVT 757
Query: 418 PNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS-GHNLDATMYNCLLGGYCEDGDEEMAL 476
PN SY +I G+C+V G +++ E++ M ++ G + ++N LL C+ A
Sbjct: 758 PNAKSYEKLILGICEV-GNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAA 816
Query: 477 KTVYDMI 483
K V DMI
Sbjct: 817 KVVDDMI 823
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 192/419 (45%), Gaps = 62/419 (14%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + +++ L ++ RV A ++D + ++ V P+V YT +I G+CK G V+ A
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG-VNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 199 VFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+ ++M C PN++T+N +IHGLC G++ A + + + +P V T T LI
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI-GLQPTVSTDTILIHRL 612
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G+ A + ++M G +P+ TY I+ C G + +A+ MM+KMR G+ ++
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 316 ATNTSMLKGFCMVGRSEEA----------------------IKHMKEM------------ 341
T +S++KG+ +G++ A IKH+ EM
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732
Query: 342 --VSRGMDLDV-----------------KAYSVIVNEYCKIGKPSEAVSILREMVAKR-M 381
+S M+ D K+Y ++ C++G A + M +
Sbjct: 733 CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGI 792
Query: 382 KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVE 441
PS FNA+ +K EA ++ +M +G P S ++ICGL K KG +
Sbjct: 793 SPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYK-KGEKERGT 851
Query: 442 ELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFL-FNKDTYCTFVK 499
+ ++LQ G+ D + ++ G + G E A ++++++K+ F+ TY ++
Sbjct: 852 SVFQNLLQCGYYEDELAWKIIIDGVGKQGLVE-AFYELFNVMEKNGCKFSSQTYSLLIE 909
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 147 VLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE 206
+LG+ N + +A+ ++D + + + P + ++ CK+ A KV D+M C
Sbjct: 767 ILGICEVGN-LRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICV 825
Query: 207 ---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQE 263
P + +I GL KKGE + VF + D + + +IDG K+G V+
Sbjct: 826 GHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQC-GYYEDELAWKIIIDGVGKQGLVEA 884
Query: 264 ALNCMKEMQEQGCQPNVVTYNALIEG 289
M++ GC+ + TY+ LIEG
Sbjct: 885 FYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 131/310 (42%), Gaps = 34/310 (10%)
Query: 42 LVTQVIKNTHNPH-HALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLL 100
L+ +++K+ H ++ F +S +P+ + Y+ Y +L + + +
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM---- 663
Query: 101 RRSNKLSD--FLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVN 158
R N +S F S I +GD G A + + +G C S + L ++ +
Sbjct: 664 -RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG-CEPSQHTFLSLIKHLLEMK 721
Query: 159 LAKAI--------------YDQVVK--EALVE----PDVFTYTTMIRGFCKMGMVESARK 198
K +D VV+ E +VE P+ +Y +I G C++G + A K
Sbjct: 722 YGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEK 781
Query: 199 VFDEMR----CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDG 254
VFD M+ P+ + +N ++ CK + + A +V + P + + LI G
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMI-CVGHLPQLESCKVLICG 840
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
K+GE + + + + + G + + + +I+G+ G V+ + + M G K +
Sbjct: 841 LYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFS 900
Query: 315 VATNTSMLKG 324
T + +++G
Sbjct: 901 SQTYSLLIEG 910
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 246/496 (49%), Gaps = 29/496 (5%)
Query: 38 LTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTAD 97
++ + V Q ++ P L FF+W SN +SH + + + L + A
Sbjct: 66 ISRTTVLQTLRLIKVPADGLRFFDWVSN-----KGFSHKEQSFFLMLEFLGRARNLNVAR 120
Query: 98 SLL----RRSN---KLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVL 148
+ L RRSN KL D + I ++G+ G + ++ F K G P L+ N++L
Sbjct: 121 NFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLL 180
Query: 149 GVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RC 205
+L++ R +A ++D++ + V PD +T+ T+I GFCK MV+ A ++F +M C
Sbjct: 181 SILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHC 240
Query: 206 EPNAITYNTMIHGLCKKGEMDGAMRVFN-RFAESKSCRPDVVTFTTLIDGYSKRGEVQEA 264
P+ +TYNT+I GLC+ G++ A V + ++ P+VV++TTL+ GY + E+ EA
Sbjct: 241 NPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEA 300
Query: 265 LNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMM--SKMRLKGIKDNVATNTSML 322
+ +M +G +PN VTYN LI+GL + DE K ++ + T ++
Sbjct: 301 VLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILI 360
Query: 323 KGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM- 381
K C G + A+K +EM++ + D +YSV++ C + A ++ E+ K +
Sbjct: 361 KAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVL 420
Query: 382 ------KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
KP +++N +F L A K ++A + + + + G + SY +I G C+ +G
Sbjct: 421 LGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCR-EG 478
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYC 495
+ + EL+ ML+ D Y L+ G + G+ +A T+ M+ S+L T+
Sbjct: 479 KFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFH 538
Query: 496 TFVKELCAKGKVKEEY 511
+ + EL + E +
Sbjct: 539 SVLAELAKRKFANESF 554
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 209/480 (43%), Gaps = 70/480 (14%)
Query: 88 LSHSLFSTADSLLRRSNKLS--DFLASKFINAFGDRGDIRGAIHWFHKAKAS--GPCALS 143
++H LF +RR+ ++ + + IN F + A F + P ++
Sbjct: 191 MAHDLFDE----MRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVT 246
Query: 144 CNAVLGVLVRANRVNLAKAIYDQVVKEAL-VEPDVFTYTTMIRGFCKMGMVESARKVFDE 202
N ++ L RA +V +A + ++K+A V P+V +YTT++RG+C ++ A VF +
Sbjct: 247 YNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHD 306
Query: 203 MRC---EPNAITYNTMIHGLCKKGEMD-------GAMRVFNRFAESKSCRPDVVTFTTLI 252
M +PNA+TYNT+I GL + D G F FA PD TF LI
Sbjct: 307 MLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFA------PDACTFNILI 360
Query: 253 DGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI- 311
+ G + A+ +EM P+ +Y+ LI LC+ D A+ + +++ K +
Sbjct: 361 KAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVL 420
Query: 312 --KDN----VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGK 365
KD A M + C G++++A K ++++ RG+ D +Y ++ +C+ GK
Sbjct: 421 LGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGK 479
Query: 366 PSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL---LLKNMPRMGCSPNFLS 422
A +L M+ + P + ++ + L+ K+ EA+L L+ M R P +
Sbjct: 480 FKPAYELLVLMLRREFVPDLETYELLIDGLL---KIGEALLAHDTLQRMLRSSYLPVATT 536
Query: 423 YSIVICGLCK------------------VKGRMQLVEELVSSMLQSGHNLDA-----TMY 459
+ V+ L K ++ + L ++V + S A +Y
Sbjct: 537 FHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLY 596
Query: 460 NC--------LLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
+ LLG CE+ A V ++KS + + DT T ++ LC + E +
Sbjct: 597 DNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAF 656
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 154/350 (44%), Gaps = 18/350 (5%)
Query: 114 FINAFGDRGDIRGAIHWFHKA--KASGPCALSCNAVLGVLVRANRVNLAKAIYDQVV-KE 170
I A D G + A+ F + P + S + ++ L N + A+ +++++ KE
Sbjct: 359 LIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKE 418
Query: 171 ALV-----EPDVFTYTTMIRGFCKMGMVESARKVFDEM--RCEPNAITYNTMIHGLCKKG 223
L+ +P Y M C G + A KVF ++ R + +Y T+I G C++G
Sbjct: 419 VLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREG 478
Query: 224 EMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTY 283
+ A + + PD+ T+ LIDG K GE A + ++ M P T+
Sbjct: 479 KFKPAYELLVLMLR-REFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTF 537
Query: 284 NALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVS 343
++++ L +E+ +++ M K I+ N+ +T +++ + E+A ++ +
Sbjct: 538 HSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYD 597
Query: 344 RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEE 403
G + ++ ++ C+ K +A +++ + K + + N V L ++ E
Sbjct: 598 NGYLVKMEE---LLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSE 654
Query: 404 AVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGR---MQLVEELVSSMLQS 450
A L + +G LS +V+ + G+ +Q V + ++++ +S
Sbjct: 655 AFSLYNELVELGNHQQ-LSCHVVLRNALEAAGKWEELQFVSKRMATLRES 703
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 207/370 (55%), Gaps = 11/370 (2%)
Query: 153 RANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRC---EPNA 209
R +++ LA A+ +++K EP++ T ++++ G+C + A + D+M +PN
Sbjct: 128 RRSQLPLALAVLGKMMKLGY-EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 186
Query: 210 ITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK 269
+T+NT+IHGL + AM + +R +K C+PD+VT+ +++G KRG+ A N +
Sbjct: 187 VTFNTLIHGLFLHNKASEAMALIDRMV-AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 245
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG 329
+M++ +P V+ YN +I+GLC ++D+A + +M KGI+ NV T +S++ C G
Sbjct: 246 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Query: 330 RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFN 389
R +A + + +M+ R ++ DV +S +++ + K GK EA + EMV + + PS+ +++
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 390 AVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
++ +L+EA + + M C P+ ++Y+ +I G CK K R++ E+ M Q
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK-RVEEGMEVFREMSQ 424
Query: 450 SGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
G + YN L+ G + GD +MA + +M+ N TY T + LC GK+++
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484
Query: 510 -----EYLKR 514
EYL+R
Sbjct: 485 AMVVFEYLQR 494
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 194/369 (52%), Gaps = 6/369 (1%)
Query: 134 AKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMV 193
AK P ++ V+ L + +LA + +++ ++ +EP V Y T+I G CK +
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHM 272
Query: 194 ESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTT 250
+ A +F EM + PN +TY+++I LC G A R+ + E K PDV TF+
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK-INPDVFTFSA 331
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG 310
LID + K G++ EA EM ++ P++VTY++LI G C+ +DEAK+M M K
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 311 IKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAV 370
+V T +++KGFC R EE ++ +EM RG+ + Y++++ + G A
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 371 SILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGL 430
I +EMV+ + P++ ++N + L KLE+A+++ + + R P +Y+I+I G+
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Query: 431 CKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFN 490
CK G+++ +L ++ G D YN ++ G+C G +E A +M + L N
Sbjct: 512 CKA-GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 570
Query: 491 KDTYCTFVK 499
Y T ++
Sbjct: 571 SGCYNTLIR 579
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 151/280 (53%), Gaps = 5/280 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + +A++ V+ ++ A+ +YD++VK + ++P + TY+++I GFC ++ A++
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS-IDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 199 VFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+F+ M C P+ +TYNT+I G CK ++ M VF ++ + + VT+ LI G
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ-RGLVGNTVTYNILIQGL 441
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+ G+ A KEM G PN++TYN L++GLC +G +++A + ++ ++ +
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T M++G C G+ E+ + +G+ DV AY+ +++ +C+ G EA ++ +E
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMG 415
M P+ +N + R + + E + L+K M G
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 160/319 (50%), Gaps = 18/319 (5%)
Query: 67 QPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLL----RRSNKLSDFLASKFINAFGDRG 122
+PN YS SC L ++ +S A LL R F S I+AF G
Sbjct: 288 RPNVVTYSSLISC-------LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Query: 123 DIRGAIHWFHK--AKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTY 180
+ A + + ++ P ++ ++++ +R++ AK +++ +V + PDV TY
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTY 399
Query: 181 TTMIRGFCKMGMVESARKVFDEMRCEP---NAITYNTMIHGLCKKGEMDGAMRVFNRFAE 237
T+I+GFCK VE +VF EM N +TYN +I GL + G+ D A +F
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV- 458
Query: 238 SKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVD 297
S P+++T+ TL+DG K G++++A+ + +Q +P + TYN +IEG+C +G V+
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 298 EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIV 357
+ + + LKG+K +V +M+ GFC G EEA KEM G + Y+ ++
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 358 NEYCKIGKPSEAVSILREM 376
+ G + +++EM
Sbjct: 579 RARLRDGDREASAELIKEM 597
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 163/320 (50%), Gaps = 5/320 (1%)
Query: 193 VESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
++ A +F EM R P+ I ++ ++ + K + D + + + ++ + T++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM-QNLGIPHNHYTYS 120
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
LI+ + +R ++ AL + +M + G +PN+VT ++L+ G C S + EA ++ +M +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
G + N T +++ G + ++ EA+ + MV++G D+ Y V+VN CK G A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICG 429
++L +M +++P V +N + L + +++A+ L K M G PN ++YS +I
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 430 LCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF 489
LC GR L+S M++ N D ++ L+ + ++G A K +M+ +S
Sbjct: 301 LCNY-GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 490 NKDTYCTFVKELCAKGKVKE 509
+ TY + + C ++ E
Sbjct: 360 SIVTYSSLINGFCMHDRLDE 379
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
++ +A+ EM + P+++ ++ L+ + D + +M+ GI N T +
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
++ FC + A+ + +M+ G + ++ S ++N YC + SEAV+++ +M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
+P+ +FN + L K EA+ L+ M GC P+ ++Y +V+ GLCK +G L
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK-RGDTDL 239
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
L++ M Q +YN ++ G C+ + AL +M K N TY + +
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 500 ELCAKGK 506
LC G+
Sbjct: 300 CLCNYGR 306
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 216/418 (51%), Gaps = 8/418 (1%)
Query: 97 DSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRA 154
D + + K F S IN G + A+ F + G P N ++ ++
Sbjct: 173 DWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKE 232
Query: 155 NRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRC---EPNAIT 211
A ++D++++++ V P+V T+ MI G K G V+ K+++ M+ E + T
Sbjct: 233 KDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYT 292
Query: 212 YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM 271
Y+++IHGLC G +D A VFN E K+ DVVT+ T++ G+ + G+++E+L + M
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFNELDERKA-SIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 272 QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRS 331
+ + N+V+YN LI+GL +G +DEA + M KG + T + G C+ G
Sbjct: 352 EHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYV 410
Query: 332 EEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAV 391
+A+ M+E+ S G LDV AY+ I++ CK + EA ++++EM ++ + NA+
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470
Query: 392 FRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSG 451
L+ + +L EA L+ M + GC P +SY+I+ICGLCK G+ V ML++G
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA-GKFGEASAFVKEMLENG 529
Query: 452 HNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
D Y+ LL G C D ++AL+ + + + + + LC+ GK+ +
Sbjct: 530 WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 218/462 (47%), Gaps = 31/462 (6%)
Query: 38 LTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTAD 97
L+P V +++K+ NP A F+ A+ P Y+H Y I L + +
Sbjct: 8 LSPKHVLKLLKSEKNPRAAFALFDSATR-HP---GYAHSAVVYHHILRRLSETRMVNHVS 63
Query: 98 SL--LRRSN--KLSDFLASKFINAFGDRGDIRGAIHWFHKAK---ASGPCALSCNAVLGV 150
+ L RS K + +A I +G A+ F + + P S N +L
Sbjct: 64 RIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNA 123
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---P 207
V A + ++++ + A V P++ TY +I+ CK E AR D M E P
Sbjct: 124 FVEAKQWVKVESLF-AYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKP 182
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
+ +Y+T+I+ L K G++D A+ +F+ +E + PDV + LIDG+ K + + A+
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSE-RGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Query: 268 M-KEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC 326
+ +++ PNV T+N +I GL G VD+ ++ +M+ + ++ T +S++ G C
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 327 MVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVS 386
G ++A E+ R +DV Y+ ++ +C+ GK E++ + R M K ++
Sbjct: 302 DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIV 360
Query: 387 SFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLC------KVKGRMQLV 440
S+N + + L+ K++EA ++ + MP G + + +Y I I GLC K G MQ V
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 441 EELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDM 482
E SG +LD Y ++ C+ E A V +M
Sbjct: 421 E-------SSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM 455
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 167/367 (45%), Gaps = 43/367 (11%)
Query: 109 FLASKFINAFGDRGDIRGAIHWFHK--AKASGPCALSCNAVLGVLVRANRVNLAKAIYDQ 166
+ S I+ D G++ A F++ + + ++ N +LG R ++ + ++
Sbjct: 291 YTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR- 349
Query: 167 VVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNA---ITYNTMIHGLCKKG 223
+ E ++ +Y +I+G + G ++ A ++ M + A TY IHGLC G
Sbjct: 350 -IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNG 408
Query: 224 EMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQG-------- 275
++ A+ V ES DV + ++ID K+ ++EA N +KEM + G
Sbjct: 409 YVNKALGVMQE-VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 276 ---------------------------CQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRL 308
C+P VV+YN LI GLC +G EA + +M
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 309 KGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSE 368
G K ++ T + +L G C + + A++ + + G++ DV ++++++ C +GK +
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 369 AVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVIC 428
A++++ M + ++ ++N + A ++ M +MG P+ +SY+ ++
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 429 GLCKVKG 435
GLC +G
Sbjct: 648 GLCMCRG 654
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 4/265 (1%)
Query: 166 QVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKK 222
Q V+ + DV+ Y ++I CK +E A + EM E N+ N +I GL +
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 223 GEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVT 282
+ G F R CRP VV++ LI G K G+ EA +KEM E G +P++ T
Sbjct: 478 SRL-GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKT 536
Query: 283 YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
Y+ L+ GLC +D A + + G++ +V + ++ G C VG+ ++A+ M M
Sbjct: 537 YSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANME 596
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLE 402
R ++ Y+ ++ + K+G + A I M ++P + S+N + + L R +
Sbjct: 597 HRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVS 656
Query: 403 EAVLLLKNMPRMGCSPNFLSYSIVI 427
A+ + G P +++I++
Sbjct: 657 YAMEFFDDARNHGIFPTVYTWNILV 681
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 173/375 (46%), Gaps = 6/375 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P +LS VL +L A A++D + Y ++R + MV +
Sbjct: 5 PKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSR 64
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+ + +R C+ + ++I K D A+ VF R E C P + ++ TL++ +
Sbjct: 65 IVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+ + + + + G PN+ TYN LI+ C ++A+ + M +G K +V
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL-R 374
+ ++++ G+ ++A++ EM RG+ DV Y+++++ + K A+ + R
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
+ + P+V + N + L ++++ + + + M + + +YS +I GLC
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA- 303
Query: 435 GRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTY 494
G + E + + + + ++D YN +LGG+C G + +L+ ++ +++ N +Y
Sbjct: 304 GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLE-LWRIMEHKNSVNIVSY 362
Query: 495 CTFVKELCAKGKVKE 509
+K L GK+ E
Sbjct: 363 NILIKGLLENGKIDE 377
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 131/288 (45%), Gaps = 7/288 (2%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASGPC--ALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
FI+ G + A+ + ++SG + +++ L + R+ A + ++ K
Sbjct: 400 FIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHG 459
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGA 228
VE + +I G + + A EM C P ++YN +I GLCK G+ G
Sbjct: 460 -VELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKF-GE 517
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
F + +PD+ T++ L+ G + ++ AL + + G + +V+ +N LI
Sbjct: 518 ASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIH 577
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
GLC G +D+A +M+ M + N+ T ++++GF VG S A M G+
Sbjct: 578 GLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQP 637
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLV 396
D+ +Y+ I+ C S A+ + + P+V ++N + R +V
Sbjct: 638 DIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 203/427 (47%), Gaps = 54/427 (12%)
Query: 135 KASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVE 194
K P +S N V+ L R R+ + ++ + D TY T+I+G+CK G
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG-YSLDEVTYNTLIKGYCKEGNFH 327
Query: 195 SARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTL 251
A + EM P+ ITY ++IH +CK G M+ AM ++ C P+ T+TTL
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC-PNERTYTTL 386
Query: 252 IDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
+DG+S++G + EA ++EM + G P+VVTYNALI G C++G +++A ++ M+ KG+
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 312 KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVS 371
+V + +++L GFC +EA++ +EMV +G+ D YS ++ +C+ + EA
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 372 ILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLC 431
+ EM+ + P ++ A+ E LE+A+ L M G P+ ++YS++I GL
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 432 K-------------------------------------------------VKGRMQLVEE 442
K +KG M ++
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626
Query: 443 LVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELC 502
+ SML H D T YN ++ G+C GD A +M+ FL + T VK L
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALH 686
Query: 503 AKGKVKE 509
+GKV E
Sbjct: 687 KEGKVNE 693
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/505 (26%), Positives = 231/505 (45%), Gaps = 66/505 (13%)
Query: 31 LKKFSCYLTPSLVTQVIKNTHNPHHALF-FFNWASNPQPNPNNYSHPRSCYAAITDVLLS 89
L S TP + ++ + N + F NWA NP+ + R C +L
Sbjct: 39 LHHLSANFTPEAASNLLLKSQNDQALILKFLNWA-----NPHQFFTLR-CKCITLHILTK 92
Query: 90 HSLFSTADSLLRR--SNKLSDFLASKFINAFGDRGD---------------------IRG 126
L+ TA L + L D AS + + D I
Sbjct: 93 FKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDK 152
Query: 127 AIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMI 184
A+ H A+A G P LS NAVL +R+ R N++ A + V KE L
Sbjct: 153 ALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR-NISFA--ENVFKEML------------ 197
Query: 185 RGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPD 244
E + PN TYN +I G C G +D A+ +F++ E+K C P+
Sbjct: 198 -----------------ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM-ETKGCLPN 239
Query: 245 VVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMS 304
VVT+ TLIDGY K ++ + ++ M +G +PN+++YN +I GLC G + E +++
Sbjct: 240 VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299
Query: 305 KMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIG 364
+M +G + T +++KG+C G +A+ EM+ G+ V Y+ +++ CK G
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Query: 365 KPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYS 424
+ A+ L +M + + P+ ++ + + + EA +L+ M G SP+ ++Y+
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 425 IVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMID 484
+I G C V G+M+ ++ M + G + D Y+ +L G+C D + AL+ +M++
Sbjct: 420 ALINGHC-VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 485 KSFLFNKDTYCTFVKELCAKGKVKE 509
K + TY + ++ C + + KE
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKE 503
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 150/329 (45%), Gaps = 22/329 (6%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
IN G + AI K G P +S + VL R+ V+ A + ++V++
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGA 228
++PD TY+++I+GFC+ + A +++EM P+ TY +I+ C +G+++ A
Sbjct: 481 -IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
+++ N E K PDVVT++ LI+G +K+ +EA + ++ + P+ VTY+ LIE
Sbjct: 540 LQLHNEMVE-KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 289 ---------------GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEE 333
G C+ G + EA ++ M K K + M+ G C G +
Sbjct: 599 NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRK 658
Query: 334 AIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFR 393
A KEMV G L +V K GK +E S++ ++ +
Sbjct: 659 AYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVE 718
Query: 394 VLVAERKLEEAVLLLKNMPRMGCSPNFLS 422
+ E ++ + +L M + G PN +S
Sbjct: 719 INHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/559 (26%), Positives = 255/559 (45%), Gaps = 64/559 (11%)
Query: 12 PSSIVTTITSLLQTPDSEPLKKFSCYLTPS-LVTQVIKNTHNPHHALFFFNWAS------ 64
P V I L++ L + P+ L Q+I + +P L +++W
Sbjct: 39 PRYDVAVIADLIEKQHWSKLGVHVTDINPNELFRQLISSELDPDLCLRYYSWLVKNSDIS 98
Query: 65 ----------NPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNK-LSDFLASK 113
+ N YS RS H + S ++ N ++ +A
Sbjct: 99 VSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADM 158
Query: 114 FINAFGDRGDIRGAIHWFHKAKASGP--CALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
+ A+ + F ++ G ALSC ++ L++ NR + +Y ++++
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK 218
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCK---KGEM 225
++P+VFT+ +I CK G + AR V ++M+ C PN ++YNT+I G CK G+M
Sbjct: 219 -IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKM 277
Query: 226 DGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNA 285
A V E+ P++ TF LIDG+ K + ++ KEM +Q +PNV++YN+
Sbjct: 278 YKADAVLKEMVEN-DVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 286 LIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG 345
LI GLC G + EA M KM G++ N+ T +++ GFC +EA+ + +G
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 346 MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFN---------------- 389
+ Y+++++ YCK+GK + ++ EM + + P V ++N
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 390 --------------AVFRVLVAE--RKLE--EAVLLLKNMPRMGCSPNFLSYSIVICGLC 431
F +L+ RK E +A +LLK M +MG P L+Y+IV+ G C
Sbjct: 457 KLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 432 KVKGRMQLVEELVSSMLQSGH-NLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFN 490
K +G ++ + + M + ++ YN LL GY + G E A + +M++K + N
Sbjct: 517 K-EGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Query: 491 KDTYCTFVKELCAKGKVKE 509
+ TY +E+ +G V +
Sbjct: 576 RITYEIVKEEMVDQGFVPD 594
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 131/301 (43%), Gaps = 4/301 (1%)
Query: 214 TMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQE 273
+ + G + G +F+ + + + + L+ Y+ + K
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGY 181
Query: 274 QGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEE 333
G + + ++ L+ L + + + +M + I+ NV T ++ C G+ +
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 334 AIKHMKEMVSRGMDLDVKAYSVIVNEYCKI---GKPSEAVSILREMVAKRMKPSVSSFNA 390
A M++M G +V +Y+ +++ YCK+ GK +A ++L+EMV + P++++FN
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 391 VFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS 450
+ + L ++ + K M PN +SY+ +I GLC G++ + M+ +
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCN-GGKISEAISMRDKMVSA 360
Query: 451 GHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEE 510
G + YN L+ G+C++ + AL + + + Y + C GK+ +
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420
Query: 511 Y 511
+
Sbjct: 421 F 421
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/521 (26%), Positives = 241/521 (46%), Gaps = 36/521 (6%)
Query: 21 SLLQTPDSEPLKKFSCYLTPSLVTQV-IKNTHNPHHALFFFNWASNPQPNPNNYSHPRSC 79
L P E L F L P V +V ++ +P A FF W+ N + H
Sbjct: 91 DLWDDPGLEKL--FDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTR----NGFKHSVES 144
Query: 80 YAAITDVLLSHSLFSTADSLLRR------SNKLSDFLASK---FINAFG----------D 120
Y + +L ++ A+S+L+ + D L S + FG D
Sbjct: 145 YCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLID 204
Query: 121 RGDIRGAIHWFHKAKA--SGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVF 178
G + AI F K K P SCN +L + + + K + ++ A P VF
Sbjct: 205 LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIG-AGARPTVF 263
Query: 179 TYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRF 235
TY MI CK G VE+AR +F+EM+ P+ +TYN+MI G K G +D + F
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 236 AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
+ C PDV+T+ LI+ + K G++ L +EM+ G +PNVV+Y+ L++ C G
Sbjct: 324 KDM-CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSV 355
+ +A + MR G+ N T TS++ C +G +A + EM+ G++ +V Y+
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 356 IVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMG 415
+++ C + EA + +M + P+++S+NA+ V + ++ A+ LL + G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 416 CSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMA 475
P+ L Y I GLC ++ +++ + +++ M + G ++ +Y L+ Y + G+
Sbjct: 503 IKPDLLLYGTFIWGLCSLE-KIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Query: 476 LKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE--EYLKR 514
L + +M + T+C + LC V + +Y R
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 184/408 (45%), Gaps = 46/408 (11%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
IN F G + + ++ + K +G P +S + ++ + + A Y + +
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGA 228
LV P+ +TYT++I CK+G + A ++ +EM E N +TY +I GLC M A
Sbjct: 398 LV-PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 456
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
+F + ++ P++ ++ LI G+ K + AL + E++ +G +P+++ Y I
Sbjct: 457 EELFGKM-DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 515
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
GLC ++ AK +M++M+ GIK N T+++ + G E + + EM +++
Sbjct: 516 GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 575
Query: 349 DVKAYSVIVNEYCKIGKPSEAV------------------------------------SI 372
V + V+++ CK S+AV ++
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635
Query: 373 LREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCK 432
+MV K + P +++ ++ + + EA+ L M +G + L+Y+ ++ GL
Sbjct: 636 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 695
Query: 433 VKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDG--DEEMALKT 478
++Q + M+ G + D + +L + E G DE + L++
Sbjct: 696 CN-QLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQS 742
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 147/321 (45%), Gaps = 9/321 (2%)
Query: 70 PNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIH 129
PN Y++ A LS + F + +L+ + + + I+ D ++ A
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDA-FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458
Query: 130 WFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGF 187
F K +G P S NA++ V+A ++ A + +++ K ++PD+ Y T I G
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRGIKPDLLLYGTFIWGL 517
Query: 188 CKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPD 244
C + +E+A+ V +EM+ + N++ Y T++ K G + + + E
Sbjct: 518 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL-DIEVT 576
Query: 245 VVTFTTLIDGYSKRGEVQEALNCMKEMQEQ-GCQPNVVTYNALIEGLCLSGNVDEAKRMM 303
VVTF LIDG K V +A++ + G Q N + A+I+GLC V+ A +
Sbjct: 577 VVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLF 636
Query: 304 SKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKI 363
+M KG+ + TS++ G G EA+ +M GM LD+ AY+ +V
Sbjct: 637 EQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHC 696
Query: 364 GKPSEAVSILREMVAKRMKPS 384
+ +A S L EM+ + + P
Sbjct: 697 NQLQKARSFLEEMIGEGIHPD 717
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 189/359 (52%), Gaps = 6/359 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ ++L NR+ A A++DQ++ +P+V TYTT+IR CK + A +
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF-KPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 199 VFDEMRC---EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+F++M PN +TYN ++ GLC+ G A + R + P+V+TFT LID +
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL-RDMMKRRIEPNVITFTALIDAF 268
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G++ EA M + P+V TY +LI GLC+ G +DEA++M M G N
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T+++ GFC R E+ +K EM +G+ + Y+V++ YC +G+P A + +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
M ++R P + ++N + L K+E+A+++ + M + N ++Y+I+I G+CK+ G
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL-G 447
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTY 494
+++ +L S+ G + Y ++ G+C G A M + FL N+ Y
Sbjct: 448 KVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 178/376 (47%), Gaps = 6/376 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + +L V+ + NR ++ ++++Q+ + + P + T ++ C A
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQM-QILGIPPLLCTCNIVMHCVCLSSQPCRASC 139
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+M EP+ +T+ ++++G C ++ A+ +F++ +P+VVT+TTLI
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL-GMGFKPNVVTYTTLIRCL 198
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K + A+ +M G +PNVVTYNAL+ GLC G +A ++ M + I+ NV
Sbjct: 199 CKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNV 258
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T T+++ F VG+ EA + M+ + DV Y ++N C G EA +
Sbjct: 259 ITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYL 318
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
M P+ + + +++E+ + + M + G N ++Y+++I G C V G
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV-G 377
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYC 495
R + +E+ + M D YN LL G C +G E AL M + N TY
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 496 TFVKELCAKGKVKEEY 511
++ +C GKV++ +
Sbjct: 438 IIIQGMCKLGKVEDAF 453
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 124/287 (43%), Gaps = 39/287 (13%)
Query: 224 EMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTY 283
+ + A+ +F R S+ P ++ FT L+ +K ++ ++MQ G P + T
Sbjct: 63 QFNDALDLFTRMVHSRPL-PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTC 121
Query: 284 NALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVS 343
N ++ +CLS A C +G+ M+
Sbjct: 122 NIVMHCVCLSSQPCRAS-------------------------CFLGK----------MMK 146
Query: 344 RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEE 403
G + D+ ++ ++N YC + +A+++ +++ KP+V ++ + R L R L
Sbjct: 147 LGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNH 206
Query: 404 AVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLL 463
AV L M G PN ++Y+ ++ GLC++ GR L+ M++ + + L+
Sbjct: 207 AVELFNQMGTNGSRPNVVTYNALVTGLCEI-GRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 464 GGYCEDGDEEMALKTVYD-MIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ + G + M K +Y+ MI S + TY + + LC G + E
Sbjct: 266 DAFVKVG-KLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDE 311
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 141/546 (25%), Positives = 258/546 (47%), Gaps = 65/546 (11%)
Query: 11 KPSSIVTTITSLLQTPDSEPLKKFSCYLTPSLVTQVIKNTHNPHHALFFFNWASNPQPNP 70
K + + +L++ P PLK FS +P N H H + +
Sbjct: 4 KSQKTLVLLANLIKFP---PLKAFSLLNSP--------NFHEFQHTHESISILLRLLLSG 52
Query: 71 NNYSHPRSCYAAITDVLLSHSLFSTADSLLR-----RSNKLSDFLASKFINAFGDRGDIR 125
N +SH +S + + HS F T+ SLL ++K L IN++ +
Sbjct: 53 NLFSHAQSLLLQVISGKI-HSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLN 111
Query: 126 GAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTM 183
+I +F++ +G P + N +L +V ++ N + +++ ++ V DV+++ +
Sbjct: 112 LSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE--NKSKVVLDVYSFGIL 169
Query: 184 IRGFCKMGMVESARKVFD------EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFA- 236
I+G C+ G +E K FD E PN + Y T+I G CKKGE++ A +F
Sbjct: 170 IKGCCEAGEIE---KSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGK 226
Query: 237 ---------------------------------ESKSCRPDVVTFTTLIDGYSKRGEVQE 263
+ P++ T+ +++ K G ++
Sbjct: 227 LGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKD 286
Query: 264 ALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLK 323
A EM+E+G N+VTYN LI GLC ++EA +++ +M+ GI N+ T +++
Sbjct: 287 AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID 346
Query: 324 GFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKP 383
GFC VG+ +A+ +++ SRG+ + Y+++V+ +C+ G S A +++EM + +KP
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406
Query: 384 SVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEEL 443
S ++ + +E+A+ L +M +G P+ +YS++I G C +KG+M L
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC-IKGQMNEASRL 465
Query: 444 VSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCA 503
SM++ + +YN ++ GYC++G ALK + +M +K N +Y ++ LC
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Query: 504 KGKVKE 509
+ K KE
Sbjct: 526 ERKSKE 531
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 167/311 (53%), Gaps = 7/311 (2%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
IN G + + K + G P + N V+ L + R A ++D++ +E
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM-RER 297
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGA 228
V ++ TY T+I G C+ + A KV D+M+ + PN ITYNT+I G C G++ A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
+ + R +S+ P +VT+ L+ G+ ++G+ A +KEM+E+G +P+ VTY LI+
Sbjct: 358 LSLC-RDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
S N+++A ++ M G+ +V T + ++ GFC+ G+ EA + K MV + +
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP 476
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
+ Y+ ++ YCK G A+ +L+EM K + P+V+S+ + VL ERK +EA L+
Sbjct: 477 NEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLV 536
Query: 409 KNMPRMGCSPN 419
+ M G P+
Sbjct: 537 EKMIDSGIDPS 547
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 150/287 (52%), Gaps = 13/287 (4%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASGPCALSCNAV-----LGVLVRANRVNLAKAIYDQVVK 169
+N G + A F + + G +SCN V +G L R ++N A + DQ+
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERG---VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMD 226
+ + P++ TY T+I GFC +G + A + +++ P+ +TYN ++ G C+KG+
Sbjct: 332 DG-INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
GA ++ E + +P VT+T LID +++ +++A+ M+E G P+V TY+ L
Sbjct: 391 GAAKMVKEM-EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
I G C+ G ++EA R+ M K + N +M+ G+C G S A+K +KEM + +
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFR 393
+V +Y ++ CK K EA ++ +M+ + PS S + + R
Sbjct: 510 APNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISR 556
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 2/161 (1%)
Query: 351 KAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKN 410
+ Y VI+N Y + + ++S EMV P + FN + +V + N
Sbjct: 95 RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFF-N 153
Query: 411 MPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDG 470
+ + S+ I+I G C+ G ++ +L+ + + G + + +Y L+ G C+ G
Sbjct: 154 ENKSKVVLDVYSFGILIKGCCEA-GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212
Query: 471 DEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
+ E A ++M + N+ TY + L G K+ +
Sbjct: 213 EIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGF 253
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 235/475 (49%), Gaps = 36/475 (7%)
Query: 12 PSSIVTTITSLL---QTPDSEPLKKFSCYLT----PSLVTQVIKN-THNPHHALFFFNWA 63
P + + I S L + PDS+ CYL+ P + +V+K +NPH F+ ++
Sbjct: 37 PEAWLVKIVSTLFVYRVPDSDLC---FCYLSKNLNPFISFEVVKKLDNNPHIGFRFWEFS 93
Query: 64 SNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLR--------RSNKLSDFLASKFI 115
N H Y +T L L A + +N+L FL S
Sbjct: 94 RFKL----NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVS--- 146
Query: 116 NAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEP 175
+F ++G + A ++ C + N++L LV+ +RV A ++D+ ++
Sbjct: 147 -SFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN- 204
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVF 232
D T+ +IRG C +G E A ++ M CEP+ +TYNT+I G CK E++ A +F
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 233 NRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCL 292
C PDVVT+T++I GY K G+++EA + + +M G P VT+N L++G
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 293 SGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKA 352
+G + A+ + KM G +V T TS++ G+C VG+ + + +EM +RGM +
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 353 YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
YS+++N C + +A +L ++ +K + P +N V K+ EA ++++ M
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 413 RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLD----ATMYNCLL 463
+ C P+ ++++I+I G C +KGRM + M+ G + D +++ +CLL
Sbjct: 445 KKKCKPDKITFTILIIGHC-MKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLL 498
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 172/361 (47%), Gaps = 5/361 (1%)
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVF-DEMRCEPNA 209
L +A +LA ++ + +K V P+ ++ F + G + A + E
Sbjct: 113 LCKAGLHDLAGQMF-ECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCC 171
Query: 210 ITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK 269
+ N++++ L K ++ AM++F+ +SC D TF LI G G+ ++AL +
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLG 230
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI-KDNVATNTSMLKGFCMV 328
M GC+P++VTYN LI+G C S +++A M ++ + +V T TSM+ G+C
Sbjct: 231 VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKA 290
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSF 388
G+ EA + +M+ G+ ++V+V+ Y K G+ A I +M++ P V +F
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 389 NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
++ ++ + L + M G PN +YSI+I LC + R+ EL+ +
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN-ENRLLKARELLGQLA 409
Query: 449 QSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
MYN ++ G+C+ G A V +M K +K T+ + C KG++
Sbjct: 410 SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF 469
Query: 509 E 509
E
Sbjct: 470 E 470
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 144/300 (48%), Gaps = 9/300 (3%)
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM-K 269
TYN + LCK G D A ++F +S P+ L+ ++++G++ A + +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMF-ECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSK-MRLKGIKDNVATNTSMLKGFCMV 328
+ +GC + N+L+ L V++A ++ + +R + D N +++G C V
Sbjct: 164 SFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNI-LIRGLCGV 219
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM-KPSVSS 387
G++E+A++ + M G + D+ Y+ ++ +CK + ++A + +++ + + P V +
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279
Query: 388 FNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM 447
+ ++ K+ EA LL +M R+G P +++++++ G K G M EE+ M
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA-GEMLTAEEIRGKM 338
Query: 448 LQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKV 507
+ G D + L+ GYC G + +M + N TY + LC + ++
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 235/475 (49%), Gaps = 36/475 (7%)
Query: 12 PSSIVTTITSLL---QTPDSEPLKKFSCYLT----PSLVTQVIKN-THNPHHALFFFNWA 63
P + + I S L + PDS+ CYL+ P + +V+K +NPH F+ ++
Sbjct: 37 PEAWLVKIVSTLFVYRVPDSDLC---FCYLSKNLNPFISFEVVKKLDNNPHIGFRFWEFS 93
Query: 64 SNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLR--------RSNKLSDFLASKFI 115
N H Y +T L L A + +N+L FL S
Sbjct: 94 RFKL----NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVS--- 146
Query: 116 NAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEP 175
+F ++G + A ++ C + N++L LV+ +RV A ++D+ ++
Sbjct: 147 -SFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN- 204
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVF 232
D T+ +IRG C +G E A ++ M CEP+ +TYNT+I G CK E++ A +F
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 233 NRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCL 292
C PDVVT+T++I GY K G+++EA + + +M G P VT+N L++G
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 293 SGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKA 352
+G + A+ + KM G +V T TS++ G+C VG+ + + +EM +RGM +
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 353 YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
YS+++N C + +A +L ++ +K + P +N V K+ EA ++++ M
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 413 RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLD----ATMYNCLL 463
+ C P+ ++++I+I G C +KGRM + M+ G + D +++ +CLL
Sbjct: 445 KKKCKPDKITFTILIIGHC-MKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLL 498
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 172/361 (47%), Gaps = 5/361 (1%)
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVF-DEMRCEPNA 209
L +A +LA ++ + +K V P+ ++ F + G + A + E
Sbjct: 113 LCKAGLHDLAGQMF-ECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCC 171
Query: 210 ITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK 269
+ N++++ L K ++ AM++F+ +SC D TF LI G G+ ++AL +
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLG 230
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI-KDNVATNTSMLKGFCMV 328
M GC+P++VTYN LI+G C S +++A M ++ + +V T TSM+ G+C
Sbjct: 231 VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKA 290
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSF 388
G+ EA + +M+ G+ ++V+V+ Y K G+ A I +M++ P V +F
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 389 NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
++ ++ + L + M G PN +YSI+I LC + R+ EL+ +
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN-ENRLLKARELLGQLA 409
Query: 449 QSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
MYN ++ G+C+ G A V +M K +K T+ + C KG++
Sbjct: 410 SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF 469
Query: 509 E 509
E
Sbjct: 470 E 470
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 144/300 (48%), Gaps = 9/300 (3%)
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM-K 269
TYN + LCK G D A ++F +S P+ L+ ++++G++ A + +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMF-ECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSK-MRLKGIKDNVATNTSMLKGFCMV 328
+ +GC + N+L+ L V++A ++ + +R + D N +++G C V
Sbjct: 164 SFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNI-LIRGLCGV 219
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM-KPSVSS 387
G++E+A++ + M G + D+ Y+ ++ +CK + ++A + +++ + + P V +
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279
Query: 388 FNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM 447
+ ++ K+ EA LL +M R+G P +++++++ G K G M EE+ M
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA-GEMLTAEEIRGKM 338
Query: 448 LQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKV 507
+ G D + L+ GYC G + +M + N TY + LC + ++
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 204/370 (55%), Gaps = 6/370 (1%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM- 203
N ++ R + A ++ +V+K EPD T+ T+I+G G V A + D M
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLG-YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 204 --RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
C+P+ +TYN++++G+C+ G+ A+ + R E ++ + DV T++T+ID + G +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLL-RKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
A++ KEM+ +G + +VVTYN+L+ GLC +G ++ ++ M + I NV T +
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
L F G+ +EA + KEM++RG+ ++ Y+ +++ YC + SEA ++L MV +
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 382 KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVE 441
P + +F ++ + +++++ + + +N+ + G N ++YSI++ G C+ G+++L E
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ-SGKIKLAE 423
Query: 442 ELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKEL 501
EL M+ G D Y LL G C++G E AL+ D+ Y T ++ +
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 502 CAKGKVKEEY 511
C GKV++ +
Sbjct: 484 CKGGKVEDAW 493
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 205/393 (52%), Gaps = 45/393 (11%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ N+++ + R+ +LA + ++ +E V+ DVFTY+T+I C+ G +++A
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 199 VFDEMRCE---PNAITYNTMIHGLCKKGEM-DGAMRVFNRFAESKSCRPDVVTFTTLIDG 254
+F EM + + +TYN+++ GLCK G+ DGA+ + + S+ P+V+TF L+D
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV--SREIVPNVITFNVLLDV 307
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
+ K G++QEA KEM +G PN++TYN L++G C+ + EA M+ M +
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
+ T TS++KG+CMV R ++ +K + + RG+ + YS++V +C+ GK A + +
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKN------------------------ 410
EMV+ + P V ++ + L KLE+A+ + ++
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 411 -----------MPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMY 459
+P G PN ++Y+++I GLCK KG + L+ M + G+ + Y
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK-KGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 460 NCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKD 492
N L+ + DGD + K + +M KS F+ D
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEM--KSCGFSAD 577
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 165/311 (53%), Gaps = 4/311 (1%)
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
N T N MI+ C+ + A V + + PD TF TLI G G+V EA+
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKL-GYEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM 327
+ M E GCQP+VVTYN+++ G+C SG+ A ++ KM + +K +V T ++++ C
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 328 VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSS 387
G + AI KEM ++G+ V Y+ +V CK GK ++ +L++MV++ + P+V +
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 388 FNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM 447
FN + V V E KL+EA L K M G SPN ++Y+ ++ G C ++ R+ ++ M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC-MQNRLSEANNMLDLM 359
Query: 448 LQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKV 507
+++ + D + L+ GYC + +K ++ + + N TY V+ C GK+
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 508 K--EEYLKRCV 516
K EE + V
Sbjct: 420 KLAEELFQEMV 430
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 158/304 (51%), Gaps = 5/304 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ N +L V V+ ++ A +Y +++ + P++ TY T++ G+C + A
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 199 VFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+ D M +C P+ +T+ ++I G C +D M+VF ++ + + VT++ L+ G+
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK-RGLVANAVTYSILVQGF 413
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+ G+++ A +EM G P+V+TY L++GLC +G +++A + ++ + +
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T++++G C G+ E+A + +G+ +V Y+V+++ CK G SEA +LR+
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
M P+ ++N + R + + L + L++ M G S + S +VI L
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593
Query: 436 RMQL 439
R+ L
Sbjct: 594 RLTL 597
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 132/284 (46%), Gaps = 2/284 (0%)
Query: 226 DGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNA 285
D A+ +F S+ P +V F+ ++ + L+ K+++ G N+ T N
Sbjct: 70 DDAIALFQEMIRSRPL-PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128
Query: 286 LIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG 345
+I C A ++ K+ G + + T +++KG + G+ EA+ + MV G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 346 MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAV 405
DV Y+ IVN C+ G S A+ +LR+M + +K V +++ + L + ++ A+
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 406 LLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGG 465
L K M G + ++Y+ ++ GLCK G+ L+ M+ + +N LL
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKA-GKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 466 YCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ ++G + A + +MI + N TY T + C + ++ E
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 210/380 (55%), Gaps = 11/380 (2%)
Query: 143 SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDE 202
S N ++ R +++ LA A+ +++K EPD+ T ++++ G+C + A + D+
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLG-YEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 203 M---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRG 259
M +PN +T+NT+IHGL + A+ + +R ++ C+PD+ T+ T+++G KRG
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV-ARGCQPDLFTYGTVVNGLCKRG 234
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
++ AL+ +K+M++ + +VV Y +I+ LC NV++A + ++M KGI+ NV T
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
S+++ C GR +A + + +M+ R ++ +V +S +++ + K GK EA + EM+ +
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
+ P + +++++ +L+EA + + M C PN ++Y+ +I G CK K R++
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK-RVEE 413
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
EL M Q G + YN L+ G + GD +MA K M+ + TY +
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 500 ELCAKGKVKE-----EYLKR 514
LC GK+++ EYL++
Sbjct: 474 GLCKYGKLEKALVVFEYLQK 493
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 216/440 (49%), Gaps = 18/440 (4%)
Query: 88 LSHSLF---------STADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG 138
L H LF + D ++ R + F +N RGDI A+ K +
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250
Query: 139 PCA--LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESA 196
A + ++ L VN A ++ ++ + + P+V TY ++IR C G A
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDA 309
Query: 197 RKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLID 253
++ +M + PN +T++ +I K+G++ A ++++ + +S PD+ T+++LI+
Sbjct: 310 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLIN 368
Query: 254 GYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKD 313
G+ + EA + + M + C PNVVTYN LI+G C + V+E + +M +G+
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 314 NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL 373
N T ++++G G + A K K+MVS G+ D+ YS++++ CK GK +A+ +
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 374 REMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKV 433
+ +M+P + ++N + + K+E+ L ++ G PN + Y+ +I G C+
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR- 547
Query: 434 KGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDT 493
KG + + L M + G ++ YN L+ DGD+ + + + +M F+ + T
Sbjct: 548 KGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 607
Query: 494 YCTFVKELCAKGKVKEEYLK 513
+ V + G++++ YL+
Sbjct: 608 -ISMVINMLHDGRLEKSYLE 626
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 169/338 (50%), Gaps = 5/338 (1%)
Query: 175 PDVFTYTTMIRGFCKMG---MVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRV 231
P + + ++ KM +V S + +R + +YN +I+ C++ ++ A+ V
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 232 FNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLC 291
+ + PD+VT ++L++GY + EA+ + +M QPN VT+N LI GL
Sbjct: 138 LGKMMKL-GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 292 LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
L EA ++ +M +G + ++ T +++ G C G + A+ +K+M ++ DV
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 352 AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
Y+ I++ C ++A+++ EM K ++P+V ++N++ R L + +A LL +M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 412 PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGD 471
+PN +++S +I K +G++ E+L M++ + D Y+ L+ G+C
Sbjct: 317 IERKINPNVVTFSALIDAFVK-EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 472 EEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ A MI K N TY T +K C +V+E
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 158/320 (49%), Gaps = 5/320 (1%)
Query: 193 VESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
++ A +F EM R P+ + +N ++ + K + D + + R ++ D+ ++
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM-QNLRISYDLYSYN 119
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
LI+ + +R ++ AL + +M + G +P++VT ++L+ G C + EA ++ +M +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
+ N T +++ G + ++ EA+ + MV+RG D+ Y +VN CK G A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICG 429
+S+L++M +++ V + + L + + +A+ L M G PN ++Y+ +I
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 430 LCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF 489
LC GR L+S M++ N + ++ L+ + ++G A K +MI +S
Sbjct: 300 LCNY-GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 490 NKDTYCTFVKELCAKGKVKE 509
+ TY + + C ++ E
Sbjct: 359 DIFTYSSLINGFCMHDRLDE 378
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 116/247 (46%), Gaps = 1/247 (0%)
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
++ +A++ EM + P++V +N L+ + D + +M+ I ++ +
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
++ FC + A+ + +M+ G + D+ S ++N YC + SEAV+++ +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
+P+ +FN + L K EAV L+ M GC P+ +Y V+ GLCK +G + L
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK-RGDIDL 238
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
L+ M + D +Y ++ C + AL +M +K N TY + ++
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 500 ELCAKGK 506
LC G+
Sbjct: 299 CLCNYGR 305
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 240/486 (49%), Gaps = 24/486 (4%)
Query: 38 LTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTAD 97
L PS V V+++ + AL FF WA Y H Y ++ +VL L +
Sbjct: 172 LKPSQVCAVLRSQDDERVALKFFYWADRQW----RYRHDPMVYYSMLEVLSKTKLCQGSR 227
Query: 98 SLL----RRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVL 151
+L RR + S+ + ++ G +R A+ + +G P L CN + V
Sbjct: 228 RVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVF 287
Query: 152 VRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPN 208
VRANR+ A +++ +V P+V TY MIRG+C + VE A ++ ++M C P+
Sbjct: 288 VRANRLEKALRFLERMQVVGIV-PNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPD 346
Query: 209 AITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM 268
++Y T++ LCK+ + + + A+ PD VT+ TLI +K EAL +
Sbjct: 347 KVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFL 406
Query: 269 KEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG-IKDNVATNTSMLKGFCM 327
K+ QE+G + + + Y+A++ LC G + EAK ++++M KG +V T T+++ GFC
Sbjct: 407 KDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCR 466
Query: 328 VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSS 387
+G ++A K ++ M + G + +Y+ ++N C+ GK EA ++ P+ +
Sbjct: 467 LGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSIT 526
Query: 388 FNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM 447
++ + L E KL EA +++ M G P + ++++ LC+ GR + +
Sbjct: 527 YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR-DGRTHEARKFMEEC 585
Query: 448 LQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKD----TYCTFVKELCA 503
L G ++ + ++ G+C++ + + AL + DM +L NK TY T V L
Sbjct: 586 LNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM----YLINKHADVFTYTTLVDTLGK 641
Query: 504 KGKVKE 509
KG++ E
Sbjct: 642 KGRIAE 647
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 142/301 (47%), Gaps = 22/301 (7%)
Query: 129 HWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFC 188
HW+ P +++ + ++ L R +++ A + ++V + P +++ C
Sbjct: 518 HWW------SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFF-PGPVEINLLLQSLC 570
Query: 189 KMGMVESARKVFDE---MRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDV 245
+ G ARK +E C N + + T+IHG C+ E+D A+ V + DV
Sbjct: 571 RDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINK-HADV 629
Query: 246 VTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEA----KR 301
T+TTL+D K+G + EA MK+M +G P VTY +I C G VD+ ++
Sbjct: 630 FTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEK 689
Query: 302 MMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYC 361
M+S+ + + I + V ++ C++G+ EEA + +++ D K ++ Y
Sbjct: 690 MISRQKCRTIYNQV------IEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYL 743
Query: 362 KIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA-VLLLKNMPRMGCSPNF 420
K G P A + M + + P V + + LV + K++EA L+L+ + R SP
Sbjct: 744 KKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQS 803
Query: 421 L 421
L
Sbjct: 804 L 804
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 184/355 (51%), Gaps = 6/355 (1%)
Query: 160 AKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAI---TYNTMI 216
AKA++D ++ L+ P Y ++I G+C+ V ++ EM+ I TY T++
Sbjct: 366 AKALFDGMIASGLI-PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 217 HGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGC 276
G+C G++DGA + S CRP+VV +TTLI + + +A+ +KEM+EQG
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIAS-GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 277 QPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIK 336
P++ YN+LI GL + +DEA+ + +M G+K N T + + G+ A K
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 337 HMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLV 396
++KEM G+ + + ++NEYCK GK EA S R MV + + ++ + L
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 397 AERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDA 456
K+++A + + M G +P+ SY ++I G K+ G MQ + M++ G +
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL-GNMQKASSIFDEMVEEGLTPNV 662
Query: 457 TMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
+YN LLGG+C G+ E A + + +M K N TYCT + C G + E +
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 192/419 (45%), Gaps = 60/419 (14%)
Query: 133 KAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGM 192
K + P N+++ L +A R++ A++ ++V+ L +P+ FTY I G+ +
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL-KPNAFTYGAFISGYIEASE 537
Query: 193 VESARKVFDEMR---CEPNAI-----------------------------------TYNT 214
SA K EMR PN + TY
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 215 MIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQ 274
+++GL K ++D A +F R K PDV ++ LI+G+SK G +Q+A + EM E+
Sbjct: 598 LMNGLFKNDKVDDAEEIF-REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 275 GCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEA 334
G PNV+ YN L+ G C SG +++AK ++ +M +KG+ N T +++ G+C G EA
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 335 IKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL---REMVAKRMKPSVSSFNAV 391
+ EM +G+ D Y+ +V+ C++ A++I ++ A P + N V
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWV 776
Query: 392 FRVLVAERKLEEAVLLLK-NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS 450
F+ E K E L+ + R G PN ++Y+I+I LCK +G ++ +EL M +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCK-EGNLEAAKELFHQMQNA 834
Query: 451 GHNLDATMYNCLLGGYCEDG---------DEEMALKTVYDMIDKSFLFNKDTYCTFVKE 500
Y LL GY + G DE +A D I S + N F+KE
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN-----AFLKE 888
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 162/334 (48%), Gaps = 50/334 (14%)
Query: 133 KAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGM 192
+ K P S ++ + + A +I+D++V+E L P+V Y ++ GFC+ G
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT-PNVIIYNMLLGGFCRSGE 677
Query: 193 VESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
+E A+++ DEM + PNA+TY T+I G CK G++ A R+F+ + K PD +T
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM-KLKGLVPDSFVYT 736
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGC--------------------------------- 276
TL+DG + +V+ A+ ++GC
Sbjct: 737 TLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795
Query: 277 ------QPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGR 330
+PN VTYN +I+ LC GN++ AK + +M+ + V T TS+L G+ +GR
Sbjct: 796 SFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGR 855
Query: 331 SEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM-----KPSV 385
E E ++ G++ D YSVI+N + K G ++A+ ++ +M AK K S+
Sbjct: 856 RAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Query: 386 SSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPN 419
S+ A+ ++E A +++NM R+ P+
Sbjct: 916 STCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/499 (23%), Positives = 212/499 (42%), Gaps = 49/499 (9%)
Query: 56 ALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFI 115
ALF AS P Y+ Y +V + L + +R+ +S + +
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV---EMKKRNIVISPYTYGTVV 424
Query: 116 NAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALV 173
GD+ GA + + ASG P + ++ ++ +R A + ++ KE +
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM-KEQGI 483
Query: 174 EPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMR 230
PD+F Y ++I G K ++ AR EM +PNA TY I G + E A +
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 231 VFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGL 290
E P+ V T LI+ Y K+G+V EA + + M +QG + TY L+ GL
Sbjct: 544 YVKEMREC-GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 291 CLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDV 350
+ VD+A+ + +MR KGI +V + ++ GF +G ++A EMV G+ +V
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 351 KAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKN 410
Y++++ +C+ G+ +A +L EM K + P+ ++ + L EA L
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 411 MPRMGCSPNFLSYSIVICGLCKVK---------------------------------GRM 437
M G P+ Y+ ++ G C++ G+
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKT 782
Query: 438 QLVEELVSSMLQS-----GHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKD 492
+L E+++ ++ G D T YN ++ C++G+ E A + + M + + +
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVT-YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841
Query: 493 TYCTFVKELCAKGKVKEEY 511
TY + + G+ E +
Sbjct: 842 TYTSLLNGYDKMGRRAEMF 860
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/523 (23%), Positives = 211/523 (40%), Gaps = 50/523 (9%)
Query: 34 FSCYLTPSLVTQVI--KNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHS 91
S + P +V V+ K +P L FFNW + + + +
Sbjct: 56 LSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEK 115
Query: 92 LFSTADSLLRRSNKLSDFLAS------KFINAFGD-------------RGDIRGAIHWFH 132
S + ++ R+ +++ +S +F+ D +G I A+ F
Sbjct: 116 ALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFS 175
Query: 133 KAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKM 190
+ P C +L L+R NR++L +Y +V+ +V DV TY +I C+
Sbjct: 176 SSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV-FDVKTYHMLIIAHCRA 234
Query: 191 GMVESARKVF---------------------DEMRCE---PNAITYNTMIHGLCKKGEMD 226
G V+ + V + M C+ P TY+ +I GLCK ++
Sbjct: 235 GNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLE 294
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
A + +S D T++ LIDG K A + EM G Y+
Sbjct: 295 DAKSLLVEM-DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC 353
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
I + G +++AK + M G+ S+++G+C + + + EM R +
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
+ Y +V C G A +I++EM+A +P+V + + + + + +A+
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGY 466
+LK M G +P+ Y+ +I GL K K RM + M+++G +A Y + GY
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAK-RMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 467 CEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
E + A K V +M + L NK + E C KGKV E
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 193/432 (44%), Gaps = 60/432 (13%)
Query: 70 PNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKL----SDFLASKFINAFGDRGDIR 125
PN ++ Y A + S F++AD ++ + + L + IN + +G +
Sbjct: 520 PNAFT-----YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 126 GAIHWFHKAKASGPC--ALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTM 183
A + G A + ++ L + ++V+ A+ I+ ++ + + PDVF+Y +
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDVFSYGVL 633
Query: 184 IRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKS 240
I GF K+G ++ A +FDEM E PN I YN ++ G C+ GE++ A + + + K
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS-VKG 692
Query: 241 CRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEA- 299
P+ VT+ T+IDGY K G++ EA EM+ +G P+ Y L++G C +V+ A
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 300 -------------------------------------KRMMSKMRLKGIKDNVATNTSML 322
R+M + K N T M+
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812
Query: 323 KGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMK 382
C G E A + +M + + V Y+ ++N Y K+G+ +E + E +A ++
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872
Query: 383 PSVSSFNAVFRVLVAERKLEEAVLLL-----KNMPRMGCSPNFLSYSIVICGLCKVKGRM 437
P ++ + + E +A++L+ KN GC + + ++ G KV G M
Sbjct: 873 PDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV-GEM 931
Query: 438 QLVEELVSSMLQ 449
++ E+++ +M++
Sbjct: 932 EVAEKVMENMVR 943
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 180/472 (38%), Gaps = 83/472 (17%)
Query: 90 HSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG-PCALSCNAVL 148
+L + A+ LL RS ++ K +A + I +W +S ++ VL
Sbjct: 10 RTLVTRANFLLFRSFSVN---VEKLSDASAEIAGILKQENWRDTLVSSNLSIEINPEVVL 66
Query: 149 GVLVRANRVNLAK---AIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM-- 203
VL R+ RV+ + ++ V + + E + +++ + C G E A V + M
Sbjct: 67 SVL-RSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIE 125
Query: 204 RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQE 263
R P A +++++ C + E D V F L DGY +G ++E
Sbjct: 126 RNWPVAEVWSSIVR--CSQ--------------EFVGKSDDGVLFGILFDGYIAKGYIEE 169
Query: 264 AL-----------------------------------NCMKEMQEQGCQPNVVTYNALIE 288
A+ + K M E+ +V TY+ LI
Sbjct: 170 AVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLII 229
Query: 289 GLCLSG---------------------NVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM 327
C +G NVD A ++ M KG+ T ++ G C
Sbjct: 230 AHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCK 289
Query: 328 VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSS 387
+ R E+A + EM S G+ LD YS++++ K A ++ EMV+ +
Sbjct: 290 IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM 349
Query: 388 FNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM 447
++ V+ E +E+A L M G P +Y+ +I G C+ K Q E LV M
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV-EM 408
Query: 448 LQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
+ + Y ++ G C GD + A V +MI N Y T +K
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 182/332 (54%), Gaps = 9/332 (2%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ ++++ + NRV A + ++ +E PDV Y T+I G CK+G+V A +
Sbjct: 137 PDVVTVSSLINGFCQGNRVFDAIDLVSKM-EEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+FD M +A+TYN+++ GLC G A R+ R + P+V+TFT +ID +
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM-RDMVMRDIVPNVITFTAVIDVF 254
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G+ EA+ +EM + P+V TYN+LI GLC+ G VDEAK+M+ M KG +V
Sbjct: 255 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T +++ GFC R +E K +EM RG+ D Y+ I+ Y + G+P A I
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
M ++ P++ +++ + L ++E+A++L +NM + + +Y+IVI G+CK+ G
Sbjct: 375 MDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI-G 430
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
++ +L S+ G D Y ++ G+C
Sbjct: 431 NVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 167/303 (55%), Gaps = 12/303 (3%)
Query: 122 GDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRV-NLAKAIYDQVVKEALVEPDVF 178
G + A+ F + + G A++ N+++ L + R + A+ + D V+++ + P+V
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD--IVPNVI 245
Query: 179 TYTTMIRGFCKMGMVESARKVFDEM--RC-EPNAITYNTMIHGLCKKGEMDGAMRVFNRF 235
T+T +I F K G A K+++EM RC +P+ TYN++I+GLC G +D A ++ +
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 236 AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
+K C PDVVT+ TLI+G+ K V E +EM ++G + +TYN +I+G +G
Sbjct: 306 V-TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSV 355
D A+ + S+M + N+ T + +L G CM R E+A+ + M ++LD+ Y++
Sbjct: 365 PDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 356 IVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMG 415
+++ CKIG +A + R + K +KP V S+ + +R+ +++ LL + M G
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Query: 416 CSP 418
P
Sbjct: 482 LLP 484
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 187/376 (49%), Gaps = 9/376 (2%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + + VL + ++ +L +++ + + + D+++Y +I C+ A
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
V +M EP+ +T +++I+G C+ + A+ + ++ E RPDVV + T+IDG
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM-EEMGFRPDVVIYNTIIDGS 184
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G V +A+ M+ G + + VTYN+L+ GLC SG +A R+M M ++ I NV
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T T+++ F G+ EA+K +EM R +D DV Y+ ++N C G+ EA +L
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
MV K P V ++N + ++++E L + M + G + ++Y+ +I G + G
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA-G 363
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYC 495
R +E+ S M S N+ Y+ LL G C + E AL +M + TY
Sbjct: 364 RPDAAQEIFSRM-DSRPNIRT--YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 496 TFVKELCAKGKVKEEY 511
+ +C G V++ +
Sbjct: 421 IVIHGMCKIGNVEDAW 436
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 158/320 (49%), Gaps = 12/320 (3%)
Query: 187 FCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVV 246
FCKM ++S R P+ + ++ ++ + K D + +F+ E D+
Sbjct: 57 FCKM--IQS--------RPLPSIVDFSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLY 105
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
++ +I+ + AL+ + +M + G +P+VVT ++LI G C V +A ++SKM
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP 366
G + +V +++ G C +G +A++ M G+ D Y+ +V C G+
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 367 SEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
S+A ++R+MV + + P+V +F AV V V E K EA+ L + M R P+ +Y+ +
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 427 ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKS 486
I GLC + GR+ ++++ M+ G D YN L+ G+C+ + K +M +
Sbjct: 286 INGLC-MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 487 FLFNKDTYCTFVKELCAKGK 506
+ + TY T ++ G+
Sbjct: 345 LVGDTITYNTIIQGYFQAGR 364
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 121/272 (44%), Gaps = 6/272 (2%)
Query: 243 PDVVTFTTLIDGYS---KRGE--VQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVD 297
P +V F + G + KR ++E ++ +M + P++V ++ ++ + S N D
Sbjct: 27 PVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYD 86
Query: 298 EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIV 357
+ M + GI ++ + ++ C R A+ + +M+ G + DV S ++
Sbjct: 87 LVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLI 146
Query: 358 NEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCS 417
N +C+ + +A+ ++ +M +P V +N + + +AV L M R G
Sbjct: 147 NGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVR 206
Query: 418 PNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALK 477
+ ++Y+ ++ GLC GR L+ M+ + + ++ + ++G A+K
Sbjct: 207 ADAVTYNSLVAGLC-CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK 265
Query: 478 TVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+M + + TY + + LC G+V E
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 201/380 (52%), Gaps = 12/380 (3%)
Query: 138 GPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESAR 197
GP ++ N++L NR++ A A+ DQ+V E +PD T+TT++ G + A
Sbjct: 132 GPSIVTLNSLLNGFCHGNRISEAVALVDQMV-EMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 198 KVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDG 254
+ + M C+P+ +TY +I+GLCK+GE D A+ + N+ + K DVV ++T+ID
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK-IEADVVIYSTVIDS 249
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
K V +ALN EM +G +P+V TY++LI LC G +A R++S M + I N
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
V T S++ F G+ EA K EM+ R +D ++ Y+ ++N +C + EA I
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
MV+K P V ++N + +K+ + + L ++M R G N ++Y+ +I G +
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 435 --GRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF-NK 491
Q+V M+ G + + YN LL G C++G E A+ V++ + KS + +
Sbjct: 430 DCDNAQMV---FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQKSKMEPDI 485
Query: 492 DTYCTFVKELCAKGKVKEEY 511
TY + +C GKV++ +
Sbjct: 486 YTYNIMSEGMCKAGKVEDGW 505
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 193/368 (52%), Gaps = 6/368 (1%)
Query: 135 KASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVE 194
K P ++ AV+ L + +LA + +++ K +E DV Y+T+I CK V+
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK-GKIEADVVIYSTVIDSLCKYRHVD 257
Query: 195 SARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTL 251
A +F EM P+ TY+++I LC G A R+ + E K P+VVTF +L
Sbjct: 258 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK-INPNVVTFNSL 316
Query: 252 IDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
ID ++K G++ EA EM ++ PN+VTYN+LI G C+ +DEA+++ + M K
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 312 KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVS 371
+V T +++ GFC + + ++ ++M RG+ + Y+ +++ + + A
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 372 ILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLC 431
+ ++MV+ + P++ ++N + L KLE+A+++ + + + P+ +Y+I+ G+C
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 432 KVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNK 491
K G+++ +L S+ G D YN ++ G+C+ G +E A M + L +
Sbjct: 497 KA-GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDS 555
Query: 492 DTYCTFVK 499
TY T ++
Sbjct: 556 GTYNTLIR 563
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 203/404 (50%), Gaps = 9/404 (2%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASGPCA--LSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
IN RG+ A++ +K + A + + V+ L + V+ A ++ ++ +
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG- 270
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAM 229
+ PDVFTY+++I C G A ++ +M + PN +T+N++I K+G++ A
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
++F+ + +S P++VT+ +LI+G+ + EA M + C P+VVTYN LI G
Sbjct: 331 KLFDEMIQ-RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
C + V + + M +G+ N T T+++ GF + A K+MVS G+ +
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
+ Y+ +++ CK GK +A+ + + +M+P + ++N + + K+E+ L
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
++ G P+ ++Y+ +I G CK KG + L M + G D+ YN L+ + D
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCK-KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLK 513
GD+ + + + +M F + TY V ++ G++ + +L+
Sbjct: 569 GDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKGFLE 611
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 171/329 (51%), Gaps = 5/329 (1%)
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAM 229
V +++TY MI C+ + A + +M P+ +T N++++G C + A+
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
+ ++ E +PD VTFTTL+ G + + EA+ ++ M +GCQP++VTY A+I G
Sbjct: 156 ALVDQMVE-MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
LC G D A +++KM I+ +V ++++ C ++A+ EM ++G+ D
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
V YS +++ C G+ S+A +L +M+ +++ P+V +FN++ E KL EA L
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
M + PN ++Y+ +I G C + R+ +++ + M+ D YN L+ G+C+
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFC-MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
++ DM + + N TY T +
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 174/355 (49%), Gaps = 28/355 (7%)
Query: 56 ALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASK-- 113
AL F N P+ ++ Y+++ L ++ +S A LL SD L K
Sbjct: 259 ALNLFTEMDNKGIRPDVFT-----YSSLISCLCNYGRWSDASRLL------SDMLERKIN 307
Query: 114 --------FINAFGDRGDIRGAIHWFHK--AKASGPCALSCNAVLGVLVRANRVNLAKAI 163
I+AF G + A F + ++ P ++ N+++ +R++ A+ I
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 164 YDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLC 220
+ +V + + PDV TY T+I GFCK V ++F +M N +TY T+IHG
Sbjct: 368 FTLMVSKDCL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 221 KKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNV 280
+ + D A VF + S P+++T+ TL+DG K G++++A+ + +Q+ +P++
Sbjct: 427 QASDCDNAQMVFKQMV-SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 281 VTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKE 340
TYN + EG+C +G V++ + + LKG+K +V +M+ GFC G EEA +
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Query: 341 MVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVL 395
M G D Y+ ++ + + G + + +++EM + R S++ V +L
Sbjct: 546 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 183/369 (49%), Gaps = 11/369 (2%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKM---GMVESARK 198
LS NA+L + +++ A ++ ++VK P + ++ ++ KM +V S +
Sbjct: 36 LSRNALLHL-----KLDEAVDLFGEMVKSRPF-PSIVEFSKLLSAIAKMKKFDLVISFGE 89
Query: 199 VFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
+ + N TYN MI+ LC++ ++ A+ + + + P +VT +L++G+
Sbjct: 90 KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKL-GYGPSIVTLNSLLNGFCHG 148
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
+ EA+ + +M E G QP+ VT+ L+ GL EA ++ +M +KG + ++ T
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
+++ G C G + A+ + +M ++ DV YS +++ CK +A+++ EM
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 379 KRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQ 438
K ++P V +++++ L + +A LL +M +PN ++++ +I K +G++
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK-EGKLI 327
Query: 439 LVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
E+L M+Q + + YN L+ G+C + A + M+ K L + TY T +
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 499 KELCAKGKV 507
C KV
Sbjct: 388 NGFCKAKKV 396
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 156/320 (48%), Gaps = 5/320 (1%)
Query: 193 VESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
++ A +F EM R P+ + ++ ++ + K + D + F E ++ T+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS-FGEKMEILGVSHNLYTYN 104
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
+I+ +R ++ AL + +M + G P++VT N+L+ G C + EA ++ +M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
G + + T T+++ G ++ EA+ ++ MV +G D+ Y ++N CK G+P A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICG 429
+++L +M +++ V ++ V L R +++A+ L M G P+ +YS +I
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 430 LCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF 489
LC GR L+S ML+ N + +N L+ + ++G A K +MI +S
Sbjct: 285 LCNY-GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 490 NKDTYCTFVKELCAKGKVKE 509
N TY + + C ++ E
Sbjct: 344 NIVTYNSLINGFCMHDRLDE 363
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 155/337 (45%), Gaps = 17/337 (5%)
Query: 187 FCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVV 246
FC G+ S +D R ++ N ++H ++D A+ +F +S+ P +V
Sbjct: 17 FCLRGIYFSGLS-YDGYR---EKLSRNALLHL-----KLDEAVDLFGEMVKSRPF-PSIV 66
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
F+ L+ +K + ++ ++M+ G N+ TYN +I LC + A ++ KM
Sbjct: 67 EFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKM 126
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP 366
G ++ T S+L GFC R EA+ + +MV G D ++ +V+ + K
Sbjct: 127 MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 186
Query: 367 SEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
SEAV+++ MV K +P + ++ AV L + + A+ LL M + + + YS V
Sbjct: 187 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTV 246
Query: 427 ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKS 486
I LCK + + L + M G D Y+ L+ C G A + + DM+++
Sbjct: 247 IDSLCKYR-HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 487 FLFNKDTYCTFVKELCAKGKVKE------EYLKRCVD 517
N T+ + + +GK+ E E ++R +D
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 212/421 (50%), Gaps = 9/421 (2%)
Query: 97 DSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPC--ALSCNAVLGVLVRA 154
D +++R + F + FI RG++ GA+ GP ++ N ++ L +
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299
Query: 155 NRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAIT 211
++ A+ ++V E L EPD +TY T+I G+CK GMV+ A ++ + P+ T
Sbjct: 300 SKFQEAEVYLGKMVNEGL-EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFT 358
Query: 212 YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM 271
Y ++I GLC +GE + A+ +FN A K +P+V+ + TLI G S +G + EA EM
Sbjct: 359 YRSLIDGLCHEGETNRALALFNE-ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 272 QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRS 331
E+G P V T+N L+ GLC G V +A ++ M KG ++ T ++ G+ +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 332 EEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAV 391
E A++ + M+ G+D DV Y+ ++N CK K + + + MV K P++ +FN +
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 392 FRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSG 451
L RKL+EA+ LL+ M +P+ +++ +I G CK G + L M ++
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK-NGDLDGAYTLFRKMEEAY 596
Query: 452 HNLDAT-MYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEE 510
+T YN ++ + E + MA K +M+D+ + TY V C G V
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 511 Y 511
Y
Sbjct: 657 Y 657
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 130/517 (25%), Positives = 238/517 (46%), Gaps = 52/517 (10%)
Query: 38 LTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTAD 97
L P VT VIK +P AL FN + H S Y ++ + L + F +
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMRKEV----GFKHTLSTYRSVIEKLGYYGKFEAME 60
Query: 98 SLL--RRSNKLSDFLASKFINA---FGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGV 150
+L R N + L ++ A +G +G ++ A++ F + P S NA++ V
Sbjct: 61 EVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSV 120
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEP 207
LV + + A +Y ++ ++ + PDV+++T ++ FCK +A ++ + M CE
Sbjct: 121 LVDSGYFDQAHKVYMRM-RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM 179
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
N + Y T++ G ++ +F + S + TF L+ K+G+V+E
Sbjct: 180 NVVAYCTVVGGFYEENFKAEGYELFGKMLAS-GVSLCLSTFNKLLRVLCKKGDVKECEKL 238
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM 327
+ ++ ++G PN+ TYN I+GLC G +D A RM+ + +G K +V T +++ G C
Sbjct: 239 LDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK 298
Query: 328 VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCK------------------------- 362
+ +EA ++ +MV+ G++ D Y+ ++ YCK
Sbjct: 299 NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFT 358
Query: 363 ----------IGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
G+ + A+++ E + K +KP+V +N + + L + + EA L M
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Query: 413 RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDE 472
G P +++I++ GLCK+ G + + LV M+ G+ D +N L+ GY
Sbjct: 419 EKGLIPEVQTFNILVNGLCKM-GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 473 EMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
E AL+ + M+D + TY + + LC K ++
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 12/263 (4%)
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAM 229
V+PDV+TY +++ G CK E + + M C PN T+N ++ LC+ ++D A+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQ-GCQPNVVTYNALIE 288
+ ++KS PD VTF TLIDG+ K G++ A ++M+E + TYN +I
Sbjct: 552 GLLEEM-KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIH 610
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
NV A+++ +M + + + T M+ GFC G K + EM+ G
Sbjct: 611 AFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKP-SVSSFNAVFRVLVAERKLEEAVLL 407
+ ++N C + EA I+ MV K + P +V++ V + VA K L+
Sbjct: 671 SLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDKKEVAAPK-----LV 725
Query: 408 LKNMPRMGCSPNFLSYSIVICGL 430
L+++ + C + +Y ++ GL
Sbjct: 726 LEDLLKKSCI-TYYAYELLFDGL 747
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 147/331 (44%), Gaps = 42/331 (12%)
Query: 196 ARKVFDEMRCE----PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTL 251
A ++F+ MR E TY ++I L G+ + V E+ +
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 252 IDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
+ Y ++G+VQEA+N + M C+P V +YNA++ L SG D+A ++ +MR +GI
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 312 KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVS 371
+V + T +K FC R A++ + M S+G +++V AY +V + + +E
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 372 ILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLC 431
+ +M+A + +S+FN + RVL + ++E LL + + G PN +
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFT--------- 253
Query: 432 KVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNK 491
YN + G C+ G+ + A++ V +I++ +
Sbjct: 254 ---------------------------YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDV 286
Query: 492 DTYCTFVKELCAKGKVKEE--YLKRCVDNTL 520
TY + LC K +E YL + V+ L
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 119/246 (48%), Gaps = 12/246 (4%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + N++L L + ++ Y +V++ P++FT+ ++ C+ ++ A
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA-PNLFTFNILLESLCRYRKLDEALG 552
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+ +EM+ P+A+T+ T+I G CK G++DGA +F + E+ T+ +I +
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 612
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+++ V A +EM ++ P+ TY +++G C +GNV+ + + +M G ++
Sbjct: 613 TEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSL 672
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVS--IL 373
T ++ C+ R EA + MV +G+ + VN C + K A +L
Sbjct: 673 TTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTICDVDKKEVAAPKLVL 726
Query: 374 REMVAK 379
+++ K
Sbjct: 727 EDLLKK 732
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 197/371 (53%), Gaps = 3/371 (0%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P A + N V+ L + +R+N A + ++++ PD TY ++ G CK+G V++A+
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFA-PDDITYGYLMNGLCKIGRVDAAKD 343
Query: 199 VFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
+F + +P + +NT+IHG G +D A V + S PDV T+ +LI GY K
Sbjct: 344 LFYRIP-KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKE 402
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
G V AL + +M+ +GC+PNV +Y L++G C G +DEA ++++M G+K N
Sbjct: 403 GLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
++ FC R EA++ +EM +G DV ++ +++ C++ + A+ +LR+M++
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 379 KRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQ 438
+ + + ++N + + +++EA L+ M G + ++Y+ +I GLC+ G +
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA-GEVD 581
Query: 439 LVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
L ML+ GH N L+ G C G E A++ +M+ + + T+ + +
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 499 KELCAKGKVKE 509
LC G++++
Sbjct: 642 NGLCRAGRIED 652
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 140/531 (26%), Positives = 248/531 (46%), Gaps = 51/531 (9%)
Query: 22 LLQTPDSEPLKKFSCYLTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYA 81
LL+ D + L+ +TP + ++++ N ++ F+W + N Y H Y
Sbjct: 60 LLKPFDLDSLRNSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQ----NGYRHSFDVYQ 115
Query: 82 AITDVLLSHSLFSTADSLL-RRSNKLSDFLASKFINAFGDR------GDIRGAIHWFHKA 134
+ L ++ F T D LL + ++ F S FI+ D G +
Sbjct: 116 VLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNV 175
Query: 135 KASGPCALSCNAVLGVLVRANRVNLAKAI-YDQVVKEALVEPDVFTYTTMIRGFCKMGMV 193
+ P S N VL +LV N +A + YD + ++ + P +FT+ +++ FC + +
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK--IPPTLFTFGVVMKAFCAVNEI 233
Query: 194 ESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTT 250
+SA + +M C PN++ Y T+IH L K ++ A+++ C PD TF
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF-LMGCVPDAETFND 292
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM---- 306
+I G K + EA + M +G P+ +TY L+ GLC G VD AK + ++
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 307 ---------------RLK-------------GIKDNVATNTSMLKGFCMVGRSEEAIKHM 338
RL GI +V T S++ G+ G A++ +
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 339 KEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAE 398
+M ++G +V +Y+++V+ +CK+GK EA ++L EM A +KP+ FN + E
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 399 RKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATM 458
++ EAV + + MPR GC P+ +++ +I GLC+V ++ L+ M+ G +
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD-EIKHALWLLRDMISEGVVANTVT 531
Query: 459 YNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
YN L+ + G+ + A K V +M+ + ++ TY + +K LC G+V +
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 176/374 (47%), Gaps = 39/374 (10%)
Query: 96 ADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRAN 155
+ +L R D +N G + A F++ P + N ++ V
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK--PEIVIFNTLIHGFVTHG 367
Query: 156 RVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITY 212
R++ AKA+ +V + PDV TY ++I G+ K G+V A +V +MR C+PN +Y
Sbjct: 368 RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 213 NTMIHGLCKKGEMDGAMRVFN-------------------------RFAES--------- 238
++ G CK G++D A V N R E+
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 239 KSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDE 298
K C+PDV TF +LI G + E++ AL +++M +G N VTYN LI G + E
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 299 AKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVN 358
A++++++M +G + T S++KG C G ++A ++M+ G + ++++N
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 359 EYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSP 418
C+ G EAV +EMV + P + +FN++ L ++E+ + + + + G P
Sbjct: 608 GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPP 667
Query: 419 NFLSYSIVICGLCK 432
+ ++++ ++ LCK
Sbjct: 668 DTVTFNTLMSWLCK 681
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 153/294 (52%), Gaps = 7/294 (2%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
++ F G I A + ++ A G P + N ++ + +R+ A I+ ++ ++
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGA 228
+PDV+T+ ++I G C++ ++ A + +M E N +TYNT+I+ ++GE+ A
Sbjct: 490 -CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
++ N S D +T+ +LI G + GEV +A + ++M G P+ ++ N LI
Sbjct: 549 RKLVNEMVFQGSPL-DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
GLC SG V+EA +M L+G ++ T S++ G C GR E+ + +++ + G+
Sbjct: 608 GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPP 667
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLE 402
D ++ +++ CK G +A +L E + P+ +++ + + ++ + L+
Sbjct: 668 DTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 151/364 (41%), Gaps = 44/364 (12%)
Query: 181 TTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKS 240
+T + F G R FD Y +I L GE R+ + +
Sbjct: 92 STSMELFSWTGSQNGYRHSFD---------VYQVLIGKLGANGEFKTIDRLLIQMKDEGI 142
Query: 241 CRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQE-QGCQPNVVTYNALIEGLCLSGNVDE- 298
+ + F +++ Y K G + M EM+ C+P +YN ++E + +SGN +
Sbjct: 143 VFKESL-FISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLE-ILVSGNCHKV 200
Query: 299 AKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVN 358
A + M + I + T ++K FC V + A+ +++M G + Y +++
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 359 EYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSP 418
K + +EA+ +L EM P +FN V L ++ EA ++ M G +P
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 419 NFLSYSIVICGLCKV------------------------------KGRMQLVEELVSSML 448
+ ++Y ++ GLCK+ GR+ + ++S M+
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 449 QS-GHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKV 507
S G D YN L+ GY ++G +AL+ ++DM +K N +Y V C GK+
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 508 KEEY 511
E Y
Sbjct: 441 DEAY 444
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 103/192 (53%), Gaps = 7/192 (3%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASGPC--ALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
INAF RG+I+ A ++ G ++ N+++ L RA V+ A++++++++++
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGA 228
P + +I G C+ GMVE A + EM P+ +T+N++I+GLC+ G ++
Sbjct: 595 HA-PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
+ +F + +++ PD VTF TL+ K G V +A + E E G PN T++ L++
Sbjct: 654 LTMFRKL-QAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Query: 289 GLCLSGNVDEAK 300
+ +D +
Sbjct: 713 SIIPQETLDRRR 724
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 201/370 (54%), Gaps = 11/370 (2%)
Query: 153 RANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD---EMRCEPNA 209
R ++++LA A+ +++K EPD+ T +++ GFC + A + EM +P++
Sbjct: 128 RRSQLSLALAVLAKMMKLG-YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDS 186
Query: 210 ITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK 269
T+NT+IHGL + A+ + +R K C+PD+VT+ +++G KRG++ AL+ +K
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMV-VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLK 245
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG 329
+M++ +P VV YN +I+ LC NV++A + ++M KGI+ NV T S+++ C G
Sbjct: 246 KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 305
Query: 330 RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFN 389
R +A + + +M+ R ++ +V +S +++ + K GK EA + EM+ + + P + +++
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 365
Query: 390 AVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
++ +L+EA + + M C PN ++Y+ +I G CK K R+ EL M Q
Sbjct: 366 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK-RVDEGMELFREMSQ 424
Query: 450 SGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
G + Y L+ G+ + + + A M+ L + TY + LC GKV+
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 510 -----EYLKR 514
EYL+R
Sbjct: 485 ALVVFEYLQR 494
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 203/404 (50%), Gaps = 9/404 (2%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
+N RGDI A+ K + P + N ++ L VN A ++ ++ +
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG- 286
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAM 229
+ P+V TY ++IR C G A ++ +M + PN +T++ +I K+G++ A
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
++++ + +S PD+ T+++LI+G+ + EA + + M + C PNVVTYN LI+G
Sbjct: 347 KLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
C + VDE + +M +G+ N T T+++ GF + A K+MVS G+ D
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
+ YS++++ C GK A+ + + +M+P + ++N + + K+E+ L
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
++ G PN ++Y+ ++ G C+ KG + + L M + G D+ YN L+ + D
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFCR-KGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRD 584
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLK 513
GD+ + + + +M F+ + T V + G++ + +LK
Sbjct: 585 GDKAASAELIREMRSCRFVGDAST-IGLVTNMLHDGRLDKSFLK 627
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 190/369 (51%), Gaps = 6/369 (1%)
Query: 134 AKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMV 193
K P ++ V+ L + ++LA ++ ++ ++ +EP V Y T+I C V
Sbjct: 214 VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNV 272
Query: 194 ESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTT 250
A +F EM PN +TYN++I LC G A R+ + E K P+VVTF+
Sbjct: 273 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSA 331
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG 310
LID + K G++ EA EM ++ P++ TY++LI G C+ +DEAK M M K
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 311 IKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAV 370
NV T +++KGFC R +E ++ +EM RG+ + Y+ +++ + + + A
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 371 SILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGL 430
+ ++MV+ + P + +++ + L K+E A+++ + + R P+ +Y+I+I G+
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 431 CKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFN 490
CK G+++ +L S+ G + Y ++ G+C G +E A +M ++ L +
Sbjct: 512 CKA-GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPD 570
Query: 491 KDTYCTFVK 499
TY T ++
Sbjct: 571 SGTYNTLIR 579
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 168/338 (49%), Gaps = 5/338 (1%)
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRV 231
P + ++ ++ KM + + ++M+ N TY+ +I+ C++ ++ A+ V
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 232 FNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLC 291
+ + PD+VT +L++G+ + +A++ + +M E G QP+ T+N LI GL
Sbjct: 139 LAKMMK-LGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 292 LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
EA ++ +M +KG + ++ T ++ G C G + A+ +K+M ++ V
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 352 AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
Y+ I++ C ++A+++ EM K ++P+V ++N++ R L + +A LL +M
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 412 PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGD 471
+PN +++S +I K +G++ E+L M++ + D Y+ L+ G+C
Sbjct: 318 IERKINPNVVTFSALIDAFVK-EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 472 EEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ A MI K N TY T +K C +V E
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 160/320 (50%), Gaps = 5/320 (1%)
Query: 193 VESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
++ A +F +M R P+ + ++ ++ + K + D + + + ++ ++ T++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM-QNLGISHNLYTYS 120
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
LI+ + +R ++ AL + +M + G +P++VT N+L+ G C + +A ++ +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
G + + T +++ G R+ EA+ + MV +G D+ Y ++VN CK G A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICG 429
+S+L++M +++P V +N + L + + +A+ L M G PN ++Y+ +I
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 430 LCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF 489
LC GR L+S M++ N + ++ L+ + ++G A K +MI +S
Sbjct: 301 LCNY-GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 490 NKDTYCTFVKELCAKGKVKE 509
+ TY + + C ++ E
Sbjct: 360 DIFTYSSLINGFCMHDRLDE 379
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 120/247 (48%), Gaps = 1/247 (0%)
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
++ +A+N +M + P++V ++ L+ + D + +M+ GI N+ T +
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
++ FC + A+ + +M+ G + D+ + ++N +C + S+AVS++ +MV
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
+P +FN + L + EAV L+ M GC P+ ++Y IV+ GLCK +G + L
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK-RGDIDL 239
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
L+ M Q +YN ++ C + AL +M +K N TY + ++
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 500 ELCAKGK 506
LC G+
Sbjct: 300 CLCNYGR 306
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 143/521 (27%), Positives = 242/521 (46%), Gaps = 35/521 (6%)
Query: 12 PSSIVTTITSLLQTPDSEP------LKKFSCYLTPSLVTQVIKNTH---NPHHALFFFNW 62
PS V+ I +LL S +KF L+P+ V+ V+K+ P A FF W
Sbjct: 82 PSPWVSQILNLLDGSASMESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCW 141
Query: 63 ASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDF-------LASKFI 115
+ + Y+H CY ++ DVL +L D + S+++ F A+ I
Sbjct: 142 SRKQK----KYTHNLECYVSLVDVL---ALAKDVDRIRFVSSEIKKFEFPMTVSAANALI 194
Query: 116 NAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALV 173
+FG G + + + K K +G P + N ++ LV A V+ A+ ++ +V++ +
Sbjct: 195 KSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRI 253
Query: 174 EPDVFTYTTMIRGFCKMGMVESARKVFDEMRC---EPNAITYNTMIHGLCKKGEMDGAMR 230
+PD+ TY TMI+G+CK G + A + +M E + ITY TMI + +
Sbjct: 254 KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA 313
Query: 231 VFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGL 290
++ E K + F+ +I G K G++ E + M +G +PNV Y LI+G
Sbjct: 314 LYQEMDE-KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 291 CLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDV 350
SG+V++A R++ +M +G K +V T + ++ G C GR EEA+ + G+ ++
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINS 432
Query: 351 KAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKN 410
YS +++ K G+ EA + EM K +NA+ RK++EA+ L K
Sbjct: 433 MFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKR 492
Query: 411 M-PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
M GC +Y+I++ G+ K + R + +L M+ G A + L G C
Sbjct: 493 MEEEEGCDQTVYTYTILLSGMFK-EHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLS 551
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYC-TFVKELCAKGKVKE 509
G A K + ++ + D C + LC G++KE
Sbjct: 552 GKVARACKILDELAPMGVIL--DAACEDMINTLCKAGRIKE 590
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 141/291 (48%), Gaps = 7/291 (2%)
Query: 93 FSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGV 150
++ ++++R+ +K + + + I+ + G + AI H+ G P ++ + V+
Sbjct: 347 YTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNG 406
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEP 207
L + RV A + + L +F Y+++I G K G V+ A ++F+EM C
Sbjct: 407 LCKNGRVEEALDYFHTCRFDGLAINSMF-YSSLIDGLGKAGRVDEAERLFEEMSEKGCTR 465
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
++ YN +I K ++D A+ +F R E + C V T+T L+ G K +EAL
Sbjct: 466 DSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKL 525
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM 327
M ++G P + AL GLCLSG V A +++ ++ G+ + A M+ C
Sbjct: 526 WDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACE-DMINTLCK 584
Query: 328 VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
GR +EA K + RG ++ + +V++N K+GK A+ ++ +
Sbjct: 585 AGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIG 635
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 38/267 (14%)
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG 310
LI + K G V+E L ++M+E G +P + TYN L+ GL + VD A+R+ M
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR 252
Query: 311 IKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAV 370
IK ++ T +M+KG YCK G+ +A+
Sbjct: 253 IKPDIVTYNTMIKG-----------------------------------YCKAGQTQKAM 277
Query: 371 SILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGL 430
LR+M + + ++ + + A+ V L + M G ++S+VI GL
Sbjct: 278 EKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGL 337
Query: 431 CKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFN 490
CK +G++ + +M++ G + +Y L+ GY + G E A++ ++ MID+ F +
Sbjct: 338 CK-EGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Query: 491 KDTYCTFVKELCAKGKVKE--EYLKRC 515
TY V LC G+V+E +Y C
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTC 423
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 185/325 (56%), Gaps = 6/325 (1%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM- 203
N ++ + ++ A+ ++D++ K +L +P V ++ T+I G+CK+G ++ ++ +M
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSL-QPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 204 --RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
R P+ TY+ +I+ LCK+ +MDGA +F+ + + P+ V FTTLI G+S+ GE+
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCK-RGLIPNDVIFTTLIHGHSRNGEI 361
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
++M +G QP++V YN L+ G C +G++ A+ ++ M +G++ + T T++
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
+ GFC G E A++ KEM G++LD +S +V CK G+ +A LREM+ +
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 382 KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVE 441
KP ++ + + + LLK M G P+ ++Y++++ GLCK+ G+M+ +
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL-GQMKNAD 540
Query: 442 ELVSSMLQSGHNLDATMYNCLLGGY 466
L+ +ML G D YN LL G+
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLLEGH 565
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 244/524 (46%), Gaps = 51/524 (9%)
Query: 1 MAVAVRKATVKPSSIVTTITSLLQTPDSEPLKKFSCYLTPSLVTQVIKNTHNP----HHA 56
++VA+R + P ++ T D ++K L+ V +I HNP +
Sbjct: 49 LSVAIRDSYKDPPLEFSSFT------DCPSIRKVLPSLSVHHVVDLI--NHNPLSLPQRS 100
Query: 57 LF-FFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRR--SNKLSDFLASK 113
+F FF + S+ QP + Y + L H +F+ A SL+ S K + +S
Sbjct: 101 IFAFFKFISS-QPG---FRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSV 156
Query: 114 FINAFGDR-----GDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLA----KAIY 164
FI+ R G + A+ + P A+ C L R +R ++ +
Sbjct: 157 FISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFR----LSRKHRFDVPIRGCGNLL 212
Query: 165 DQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGE 224
D+++K + P T I GF M ++++ + N +N +++ CK+G
Sbjct: 213 DRMMK---LNP-----TGTIWGF-YMEILDAGFPL--------NVYVFNILMNKFCKEGN 255
Query: 225 MDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
+ A +VF+ + +S +P VV+F TLI+GY K G + E +M++ +P+V TY+
Sbjct: 256 ISDAQKVFDEITK-RSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYS 314
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
ALI LC +D A + +M +G+ N T+++ G G + + ++M+S+
Sbjct: 315 ALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA 404
G+ D+ Y+ +VN +CK G A +I+ M+ + ++P ++ + +E A
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 405 VLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLG 464
+ + K M + G + + +S ++CG+CK +GR+ E + ML++G D Y ++
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCK-EGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Query: 465 GYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
+C+ GD + K + +M + + TY + LC G++K
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMK 537
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 218/440 (49%), Gaps = 14/440 (3%)
Query: 80 YAAITDVLLSHSLFSTADSLLRRSNKL----SDFLASKFINAFGDRGDIRGAIHWFHKAK 135
Y A+ D L F A+ L R K+ +D S I+ F RG + A+ + +
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 136 ASGPCALSC---NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGM 192
+G LS N+++ + ++ A+ +++ + L EP V TYT+++ G+C G
Sbjct: 430 DTG-LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL-EPTVVTYTSLMGGYCSKGK 487
Query: 193 VESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
+ A +++ EM + P+ T+ T++ GL + G + A+++FN AE + +P+ VT+
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW-NVKPNRVTYN 546
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
+I+GY + G++ +A +KEM E+G P+ +Y LI GLCL+G EAK + +
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG 606
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
+ N T +L GFC G+ EEA+ +EMV RG+DLD+ Y V+++ K
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLF 666
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICG 429
+L+EM + +KP + ++ +EA + M GC PN ++Y+ VI G
Sbjct: 667 FGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726
Query: 430 LCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF 489
LCK G + E L S M + Y C L + + +++ I K L
Sbjct: 727 LCKA-GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA 785
Query: 490 NKDTYCTFVKELCAKGKVKE 509
N TY ++ C +G+++E
Sbjct: 786 NTATYNMLIRGFCRQGRIEE 805
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 206/409 (50%), Gaps = 41/409 (10%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + +A+L LV+ LA +++ +V + PDV+ YT +IR C++ + A++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVG-IRPDVYIYTGVIRSLCELKDLSRAKE 248
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLI--- 252
+ M C+ N + YN +I GLCKK ++ A+ + A K +PDVVT+ TL+
Sbjct: 249 MIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA-GKDLKPDVVTYCTLVYGL 307
Query: 253 --------------------------------DGYSKRGEVQEALNCMKEMQEQGCQPNV 280
+G KRG+++EALN +K + + G PN+
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367
Query: 281 VTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKE 340
YNALI+ LC EA+ + +M G++ N T + ++ FC G+ + A+ + E
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 341 MVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERK 400
MV G+ L V Y+ ++N +CK G S A + EM+ K+++P+V ++ ++ ++ K
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 401 LEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYN 460
+ +A+ L M G +P+ +++ ++ GL + G ++ +L + M + + YN
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA-GLIRDAVKLFNEMAEWNVKPNRVTYN 546
Query: 461 CLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
++ GYCE+GD A + + +M +K + + +Y + LC G+ E
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 172/358 (48%), Gaps = 10/358 (2%)
Query: 157 VNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYN 213
+NL K + D V P++F Y +I CK A +FD M PN +TY+
Sbjct: 352 LNLVKRVVD-----FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYS 406
Query: 214 TMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQE 273
+I C++G++D A+ ++ + V + +LI+G+ K G++ A M EM
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDT-GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN 465
Query: 274 QGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEE 333
+ +P VVTY +L+ G C G +++A R+ +M KGI ++ T T++L G G +
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 334 AIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFR 393
A+K EM + + Y+V++ YC+ G S+A L+EM K + P S+ +
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 394 VLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHN 453
L + EA + + + + C N + Y+ ++ G C+ +G+++ + M+Q G +
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR-EGKLEEALSVCQEMVQRGVD 644
Query: 454 LDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
LD Y L+ G + D ++ + +M D+ + Y + + G KE +
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/519 (22%), Positives = 212/519 (40%), Gaps = 87/519 (16%)
Query: 54 HHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRR----SNKLSDF 109
H A F+ PN+ + Y+ + D+ TA S L KLS +
Sbjct: 384 HEAELLFDRMGKIGLRPNDVT-----YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 110 LASKFINAFGDRGDIRGAIHWFHKA--KASGPCALSCNAVLGVLVRANRVNLAKAIYDQV 167
+ IN GDI A + + K P ++ +++G ++N A +Y ++
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 168 VKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGE 224
+ + P ++T+TT++ G + G++ A K+F+EM +PN +TYN MI G C++G+
Sbjct: 499 TGKG-IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 225 MDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
M A E K PD ++ LI G G+ EA + + + C+ N + Y
Sbjct: 558 MSKAFEFLKEMTE-KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 285 ALIEGLCLSGNVDEAKR-----------------------------------MMSKMRLK 309
L+ G C G ++EA ++ +M +
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
G+K + TSM+ G +EA M++ G + Y+ ++N CK G +EA
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 370 VSILREM-----------------------------------VAKRMKPSVSSFNAVFRV 394
+ +M + K + + +++N + R
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRG 796
Query: 395 LVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNL 454
+ ++EEA L+ M G SP+ ++Y+ +I LC+ + ++ EL +SM + G
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCR-RNDVKKAIELWNSMTEKGIRP 855
Query: 455 DATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDT 493
D YN L+ G C G+ A + +M+ + + N T
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 17/254 (6%)
Query: 79 CYAAITDVLLSHS----LFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKA 134
CY + D L H F + R K D + + I+A GD + A +
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Query: 135 KASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGM 192
G P ++ AV+ L +A VN A+ + ++ + V P+ TY + K G
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV-PNQVTYGCFLDILTK-GE 766
Query: 193 VESARKVFDEMRCE------PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVV 246
V+ + V E+ N TYN +I G C++G ++ A + R PD +
Sbjct: 767 VDMQKAV--ELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMI-GDGVSPDCI 823
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
T+TT+I+ +R +V++A+ M E+G +P+ V YN LI G C++G + +A + ++M
Sbjct: 824 TYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Query: 307 RLKGIKDNVATNTS 320
+G+ N T+ +
Sbjct: 884 LRQGLIPNNKTSRT 897
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 192/339 (56%), Gaps = 5/339 (1%)
Query: 174 EPDVFTYTTMIRGFCKMGMVESARKVFD---EMRCEPNAITYNTMIHGLCKKGEMDGAMR 230
EPD + T++ G C V A ++ D EM +P IT NT+++GLC G++ A+
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 231 VFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGL 290
+ +R E+ +P+ VT+ +++ K G+ A+ +++M+E+ + + V Y+ +I+GL
Sbjct: 215 LIDRMVET-GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 291 CLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDV 350
C G++D A + ++M +KG K ++ T +++ GFC GR ++ K +++M+ R + +V
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 351 KAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKN 410
+SV+++ + K GK EA +L+EM+ + + P+ ++N++ E +LEEA+ ++
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 411 MPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDG 470
M GC P+ ++++I+I G CK R+ EL M G + YN L+ G+C+ G
Sbjct: 394 MISKGCDPDIMTFNILINGYCKAN-RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 471 DEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
E+A K +M+ + + +Y + LC G++++
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Score = 174 bits (442), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 195/377 (51%), Gaps = 8/377 (2%)
Query: 96 ADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVR 153
D ++ +K + + +N G + A+ + +G P ++ VL V+ +
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK 240
Query: 154 ANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAI 210
+ + LA + ++ +E ++ D Y+ +I G CK G +++A +F+EM + + I
Sbjct: 241 SGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 299
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKE 270
TYNT+I G C G D ++ + K P+VVTF+ LID + K G+++EA +KE
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRK-ISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 271 MQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGR 330
M ++G PN +TYN+LI+G C ++EA +M+ M KG ++ T ++ G+C R
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 331 SEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNA 390
++ ++ +EM RG+ + Y+ +V +C+ GK A + +EMV++R++P + S+
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 391 VFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS 450
+ L +LE+A+ + + + + Y I+I G+C ++ +L S+
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA-SKVDDAWDLFCSLPLK 537
Query: 451 GHNLDATMYNCLLGGYC 467
G LDA YN ++ C
Sbjct: 538 GVKLDARAYNIMISELC 554
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 191/379 (50%), Gaps = 14/379 (3%)
Query: 80 YAAITDVLLSHSLFSTADSLLR----RSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAK 135
Y + +V+ + A LLR R+ KL S I+ G + A + F++ +
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 136 ASGPCA--LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMV 193
G A ++ N ++G A R + + ++K + P+V T++ +I F K G +
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK-ISPNVVTFSVLIDSFVKEGKL 349
Query: 194 ESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTT 250
A ++ EM PN ITYN++I G CK+ ++ A+++ + SK C PD++TF
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI-SKGCDPDIMTFNI 408
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG 310
LI+GY K + + L +EM +G N VTYN L++G C SG ++ AK++ +M +
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 311 IKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAV 370
++ ++ + +L G C G E+A++ ++ M+LD+ Y +I++ C K +A
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Query: 371 SILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI--- 427
+ + K +K ++N + L + L +A +L + M G +P+ L+Y+I+I
Sbjct: 529 DLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588
Query: 428 CGLCKVKGRMQLVEELVSS 446
G +L+EE+ SS
Sbjct: 589 LGDDDATTAAELIEEMKSS 607
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 168/388 (43%), Gaps = 75/388 (19%)
Query: 194 ESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTT 250
+ A +F +M R P I +N + + K + + + + + ESK + T +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM-ESKGIAHSIYTLSI 128
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG 310
+I+ + + ++ A + M ++ + G +P+ V +N L+ GLCL V EA ++ +M G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 311 IKDNVATNTSMLKGFCMVGRSEEAI----------------------------------- 335
K + T +++ G C+ G+ +A+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 336 KHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAV---- 391
+ +++M R + LD YS+I++ CK G A ++ EM K K + ++N +
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 392 ---------------------------FRVL----VAERKLEEAVLLLKNMPRMGCSPNF 420
F VL V E KL EA LLK M + G +PN
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 421 LSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVY 480
++Y+ +I G CK + R++ ++V M+ G + D +N L+ GYC+ + L+
Sbjct: 369 ITYNSLIDGFCK-ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 481 DMIDKSFLFNKDTYCTFVKELCAKGKVK 508
+M + + N TY T V+ C GK++
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
+ +A++ ++M + P V+ +N L + + + + +M KGI ++ T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
M+ FC + A M +++ G + D ++ ++N C + SEA+ ++ MV
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
KP++ + N + L K+ +AV+L+ M G PN ++Y V+ +CK G+ L
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK-SGQTAL 246
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
EL+ M + LDA Y+ ++ G C+DG + A +M K F + TY T +
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 500 ELCAKGK 506
C G+
Sbjct: 307 GFCNAGR 313
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 208/403 (51%), Gaps = 41/403 (10%)
Query: 135 KASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVE 194
K P + ++ L ++ A ++D+++ +P+V TYT +I G C+ G +E
Sbjct: 295 KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG-CKPNVHTYTVLIDGLCRDGKIE 353
Query: 195 SARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTL 251
A V +M R P+ ITYN +I+G CK G + A + E ++C+P+V TF L
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLT-VMEKRACKPNVRTFNEL 412
Query: 252 IDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
++G + G+ +A++ +K M + G P++V+YN LI+GLC G+++ A +++S M I
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 312 KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVS 371
+ + T T+++ FC G+++ A + M+ +G+ LD + +++ CK+GK +A+
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 372 ILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRM----------------- 414
IL +V R+ + S N + +L K++E + +L + ++
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 415 ------------------GCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDA 456
GC PN Y+I+I GLC+ GR++ E+L+S+M SG + +
Sbjct: 593 RSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQF-GRVEEAEKLLSAMQDSGVSPNH 651
Query: 457 TMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
Y ++ GY +G + AL+TV M+++ + N Y + ++
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQ 694
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/529 (25%), Positives = 245/529 (46%), Gaps = 45/529 (8%)
Query: 19 ITSLLQTPDSE---PLKKFSCYLTPSLVTQVIKNTHNPHH-ALFFFNWASNPQPNPNNYS 74
+ SLL+TP+ E LK ++ P++ +QVI + + + FF W ++Y
Sbjct: 45 VASLLKTPNWEKNSSLKSLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKH----SSYC 100
Query: 75 HPRSCYAAITDVLLSHSLFSTADS----LLRRSNKLSDFLASKFINAFGDRGDIRG---- 126
+ + +++S L+ A + L++ ++ + K + F + ++ G
Sbjct: 101 FDPTQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEML-KLMYCFDELREVFGFRLN 159
Query: 127 -------------------AIHWFHKAKASGPCA--LSCNAVLGVLVRANRVNLAKAIYD 165
A + + +A G + ++ L + A+
Sbjct: 160 YPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMS 219
Query: 166 QVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD----EMRCEPNAITYNTMIHGLCK 221
+++K V D T+++ GFC+ + A KVFD E+ C PN+++Y+ +IHGLC+
Sbjct: 220 KILKIGFV-LDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 222 KGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVV 281
G ++ A + ++ E K C+P T+T LI RG + +A N EM +GC+PNV
Sbjct: 279 VGRLEEAFGLKDQMGE-KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH 337
Query: 282 TYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEM 341
TY LI+GLC G ++EA + KM I +V T +++ G+C GR A + + M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 342 VSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKL 401
R +V+ ++ ++ C++GKP +AV +L+ M+ + P + S+N + L E +
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457
Query: 402 EEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNC 461
A LL +M P+ L+++ +I CK +G+ + + ML+ G +LD
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFCK-QGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 462 LLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEE 510
L+ G C+ G AL + ++ L + + L KVKEE
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEE 565
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 189/387 (48%), Gaps = 38/387 (9%)
Query: 160 AKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMI 216
A ++D + KE P+ +Y+ +I G C++G +E A + D+M C+P+ TY +I
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 217 HGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGC 276
LC +G +D A +F+ + C+P+V T+T LIDG + G+++EA ++M +
Sbjct: 309 KALCDRGLIDKAFNLFDEMI-PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 277 QPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIK 336
P+V+TYNALI G C G V A +++ M + K NV T +++G C VG+ +A+
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 337 HMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLV 396
+K M+ G+ D+ +Y+V+++ C+ G + A +L M ++P +F A+
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Query: 397 AERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKV---KGRMQLVEELVS-SMLQSGH 452
+ K + A L M R G S + ++ + +I G+CKV + + ++E LV +L + H
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH 547
Query: 453 NLDATM------------------------------YNCLLGGYCEDGDEEMALKTVYDM 482
+L+ + Y L+ G GD + + + M
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Query: 483 IDKSFLFNKDTYCTFVKELCAKGKVKE 509
L N Y + LC G+V+E
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEE 634
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 199/433 (45%), Gaps = 66/433 (15%)
Query: 127 AIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMI 184
A+H + +G P +S N ++ L R +N A + + +EPD T+T +I
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM-NCFDIEPDCLTFTAII 483
Query: 185 RGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAE---- 237
FCK G + A M + +T T+I G+CK G+ A+ + +
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543
Query: 238 -------------SKSCR-----------------PDVVTFTTLIDGYSKRGEVQEALNC 267
SK C+ P VVT+TTL+DG + G++ +
Sbjct: 544 TTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI 603
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM 327
++ M+ GC PNV Y +I GLC G V+EA++++S M+ G+ N T T M+KG+
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Query: 328 VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP---SEAVSI----LREM---- 376
G+ + A++ ++ MV RG +L+ + YS ++ + K SE ++ LRE
Sbjct: 664 NGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPEC 723
Query: 377 ------VAKRMKPSVSSFNAVFRV--LVAERKLEEAVLLLKNMPRMGCSPNFL--SYSIV 426
V +++ +S +F V L E + +E+ L++N+ G FL + I+
Sbjct: 724 INELISVVEQLGGCISGL-CIFLVTRLCKEGRTDESNDLVQNVLERGV---FLEKAMDII 779
Query: 427 ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKS 486
+ C K + + EL++ +L+SG + ++ G ++GD E A + V +++ +
Sbjct: 780 MESYCSKKKHTKCM-ELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSN 838
Query: 487 FLFNKDTYCTFVK 499
+ K T+V+
Sbjct: 839 GVVEKSGVLTYVE 851
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 153/336 (45%), Gaps = 41/336 (12%)
Query: 180 YTTMIRGFCKMGMVESARKVFDEMRCEP---NAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
Y++++ K+ + A + M + I Y T+++ LCK G + A ++
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM-QEQGCQPNVVTYNALIEGLCLSGN 295
+ D T+L+ G+ + +++AL M +E C PN V+Y+ LI GLC G
Sbjct: 223 KIGFVL-DSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGR 281
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSV 355
++EA + +M KG + + T T ++K C G ++A EM+ RG +V Y+V
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 356 IVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMG 415
+++ C+ GK EA + R+MV R+ PSV ++NA+ + ++ A LL M +
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401
Query: 416 CSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMA 475
C PN +++ ++ GLC+V G+ L+ ML +G + D YN L+ G
Sbjct: 402 CKPNVRTFNELMEGLCRV-GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG---------- 450
Query: 476 LKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
LC +G + Y
Sbjct: 451 -------------------------LCREGHMNTAY 461
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 224/470 (47%), Gaps = 47/470 (10%)
Query: 74 SHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLS---DFLA-SKFINAFGDRGDIRGAIH 129
SH Y+ + S S A ++L + KL D + S +N + I A+
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 130 WFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGF 187
+ G P + ++ L N+ + A A+ DQ+V+ +PD+ TY T++ G
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGL 233
Query: 188 CKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPD 244
CK G ++ A + +M + E + + YNT+I GLCK MD A+ +F ++K RPD
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM-DNKGIRPD 292
Query: 245 V-----------------------------------VTFTTLIDGYSKRGEVQEALNCMK 269
V VTF+ LID + K G++ EA
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG 329
EM ++ P++ TY++LI G C+ +DEAK M M K NV T ++++KGFC
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 330 RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFN 389
R EE ++ +EM RG+ + Y+ +++ + + A + ++MV+ + P++ ++N
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 390 AVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
+ L KL +A+++ + + R P+ +Y+I+I G+CK G+++ EL ++
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA-GKVEDGWELFCNLSL 531
Query: 450 SGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
G + + YN ++ G+C G +E A + M + L N TY T ++
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 204/370 (55%), Gaps = 11/370 (2%)
Query: 153 RANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD---EMRCEPNA 209
R ++++LA A+ +++K EPD+ T ++++ G+C + A + D EM +P+
Sbjct: 130 RRSQLSLALAVLAKMMKLG-YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 210 ITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK 269
T+ T+IHGL + A+ + ++ + + C+PD+VT+ T+++G KRG++ AL+ +K
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQ-RGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG 329
+M++ + +VV YN +I+GLC ++D+A + ++M KGI+ +V T +S++ C G
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Query: 330 RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFN 389
R +A + + +M+ R ++ +V +S +++ + K GK EA + EM+ + + P + +++
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 390 AVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
++ +L+EA + + M C PN ++YS +I G CK K R++ EL M Q
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK-RVEEGMELFREMSQ 426
Query: 450 SGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
G + Y L+ G+ + D + A M+ N TY + LC GK+ +
Sbjct: 427 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 486
Query: 510 -----EYLKR 514
EYL+R
Sbjct: 487 AMVVFEYLQR 496
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 199/399 (49%), Gaps = 18/399 (4%)
Query: 104 NKLSDFL-ASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKA 162
N+LSD + ++ FGD R P + N +L + + N+ L +
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSR-----------PFPSIVEFNKLLSAVAKMNKFELVIS 104
Query: 163 IYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGL 219
+ +Q+ + + D++TY+ I FC+ + A V +M EP+ +T +++++G
Sbjct: 105 LGEQM-QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGY 163
Query: 220 CKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPN 279
C + A+ + ++ E +PD TFTTLI G + EA+ + +M ++GCQP+
Sbjct: 164 CHSKRISDAVALVDQMVE-MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
Query: 280 VVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMK 339
+VTY ++ GLC G++D A ++ KM I+ +V +++ G C ++A+
Sbjct: 223 LVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFT 282
Query: 340 EMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAER 399
EM ++G+ DV YS +++ C G+ S+A +L +M+ +++ P+V +F+A+ V E
Sbjct: 283 EMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 342
Query: 400 KLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMY 459
KL EA L M + P+ +YS +I G C + R+ + + M+ + Y
Sbjct: 343 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC-MHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 460 NCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
+ L+ G+C+ E ++ +M + + N TY T +
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 158/280 (56%), Gaps = 5/280 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ +A++ V+ ++ A+ +YD+++K + ++PD+FTY+++I GFC ++ A+
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 199 VFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+F+ M C PN +TY+T+I G CK ++ M +F ++ + + VT+TTLI G+
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYTTLIHGF 443
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+ + A K+M G PN++TYN L++GLC +G + +A + ++ ++ ++
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T M++G C G+ E+ + + +G+ +V AY+ +++ +C+ G EA S+L++
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMG 415
M P+ ++N + R + + E + L+K M G
Sbjct: 564 MKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 161/320 (50%), Gaps = 5/320 (1%)
Query: 193 VESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
V+ A +F +M R P+ + +N ++ + K + + + + + ++ D+ T++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM-QTLGISHDLYTYS 122
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
I+ + +R ++ AL + +M + G +P++VT ++L+ G C S + +A ++ +M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
G K + T T+++ G + ++ EA+ + +MV RG D+ Y +VN CK G A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICG 429
+S+L++M +++ V +N + L + +++A+ L M G P+ +YS +I
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 430 LCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF 489
LC GR L+S M++ N + ++ L+ + ++G A K +MI +S
Sbjct: 303 LCNY-GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 490 NKDTYCTFVKELCAKGKVKE 509
+ TY + + C ++ E
Sbjct: 362 DIFTYSSLINGFCMHDRLDE 381
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 120/247 (48%), Gaps = 1/247 (0%)
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
+V +A++ +M + P++V +N L+ + + + +M+ GI ++ T +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
+ FC + A+ + +M+ G + D+ S ++N YC + S+AV+++ +MV
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
KP +F + L K EAV L+ M + GC P+ ++Y V+ GLCK +G + L
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK-RGDIDL 241
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
L+ M + D +YN ++ G C+ + AL +M +K + TY + +
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 500 ELCAKGK 506
LC G+
Sbjct: 302 CLCNYGR 308
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Query: 355 VIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRM 414
++ N I K +AV + +MV R PS+ FN + + K E + L + M +
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 415 GCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEM 474
G S + +YSI I C+ + ++ L +++ M++ G+ D + LL GYC
Sbjct: 113 GISHDLYTYSIFINCFCR-RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 475 ALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
A+ V M++ + + T+ T + L K E
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 198/360 (55%), Gaps = 12/360 (3%)
Query: 153 RANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD---EMRCEPNA 209
R +++LA + +++K EPD T++T+I G C G V A ++ D EM +P
Sbjct: 119 RCRKLSLAFSAMGKIIKLG-YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 210 ITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK 269
IT N +++GLC G++ A+ + +R E+ +P+ VT+ ++ K G+ A+ ++
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVET-GFQPNEVTYGPVLKVMCKSGQTALAMELLR 236
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG 329
+M+E+ + + V Y+ +I+GLC G++D A + ++M +KG K ++ T++++GFC G
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Query: 330 RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFN 389
R ++ K +++M+ R + DV A+S +++ + K GK EA + +EM+ + + P ++
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 390 AVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVE---ELVSS 446
++ E +L++A +L M GC PN +++I+I G CK L++ EL
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA----NLIDDGLELFRK 412
Query: 447 MLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGK 506
M G D YN L+ G+CE G E+A + +M+ + + +Y + LC G+
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 187/342 (54%), Gaps = 6/342 (1%)
Query: 174 EPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMR 230
+ D+ YTT+IRGFC G + K+ +M + P+ + ++ +I K+G++ A
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE 338
Query: 231 VFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGL 290
+ + + PD VT+T+LIDG+ K ++ +A + + M +GC PN+ T+N LI G
Sbjct: 339 LHKEMIQ-RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 291 CLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDV 350
C + +D+ + KM L+G+ + T ++++GFC +G+ E A + +EMVSR + D+
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 351 KAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKN 410
+Y ++++ C G+P +A+ I ++ +M+ + +N + + K+++A L +
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 517
Query: 411 MPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDG 470
+P G P+ +Y+I+I GLCK KG + + L M + GH+ + YN L+ + +G
Sbjct: 518 LPLKGVKPDVKTYNIMIGGLCK-KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEG 576
Query: 471 DEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYL 512
D + K + ++ F + T V ++ + G++K+ +L
Sbjct: 577 DATKSAKLIEEIKRCGFSVDASTV-KMVVDMLSDGRLKKSFL 617
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 165/388 (42%), Gaps = 75/388 (19%)
Query: 194 ESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTT 250
+ A +F EM R P I ++ + + + + D + + + E K ++ T +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQM-ELKGIAHNLYTLSI 112
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG 310
+I+ + ++ A + M ++ + G +P+ VT++ LI GLCL G V EA ++ +M G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 311 IKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG------------------------- 345
K + T +++ G C+ G+ +A+ + MV G
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 346 ----------MDLDVKAYSVIVNEYCK--------------------------------- 362
+ LD YS+I++ CK
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 363 --IGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNF 420
G+ + +LR+M+ +++ P V +F+A+ V E KL EA L K M + G SP+
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 421 LSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVY 480
++Y+ +I G CK + ++ ++ M+ G + +N L+ GYC+ + L+
Sbjct: 353 VTYTSLIDGFCK-ENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 481 DMIDKSFLFNKDTYCTFVKELCAKGKVK 508
M + + + TY T ++ C GK++
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLE 439
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 132/284 (46%), Gaps = 2/284 (0%)
Query: 226 DGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNA 285
D A+ +F S+ RP ++ F+ L ++ + L+ K+M+ +G N+ T +
Sbjct: 54 DDAVDLFQEMTRSRP-RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSI 112
Query: 286 LIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG 345
+I C + A M K+ G + + T ++++ G C+ GR EA++ + MV G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 346 MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAV 405
+ + +VN C GK S+AV ++ MV +P+ ++ V +V+ + A+
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 406 LLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGG 465
LL+ M + + YSI+I GLCK G + L + M G D +Y L+ G
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCK-DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 466 YCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+C G + K + DMI + + + + +GK++E
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 112/234 (47%), Gaps = 18/234 (7%)
Query: 100 LRRSNKLSDFLASK-----------FINAFGDRGDIRGAIHWFHKAKASGPCA--LSCNA 146
L ++N + D + SK IN + I + F K G A ++ N
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 147 VLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM--- 203
++ ++ +AK ++ ++V V PD+ +Y ++ G C G E A ++F+++
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRR-VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486
Query: 204 RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQE 263
+ E + YN +IHG+C ++D A +F K +PDV T+ +I G K+G + E
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP-LKGVKPDVKTYNIMIGGLCKKGSLSE 545
Query: 264 ALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVAT 317
A ++M+E G PN TYN LI G+ ++ +++ +++ G + +T
Sbjct: 546 ADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST 599
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 365 KPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYS 424
K +AV + +EM R +P + F+ +F V+ ++ + + L K M G + N + S
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 425 IVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMID 484
I+I C+ + ++ L + +++ G+ D ++ L+ G C +G AL+ V M++
Sbjct: 112 IMINCCCRCR-KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 485 KSFLFNKDTYCTFVKELCAKGKVKEEYL 512
T V LC GKV + L
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVL 198
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 137/457 (29%), Positives = 230/457 (50%), Gaps = 38/457 (8%)
Query: 33 KFSCYLTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSL 92
K+S +TPS V ++++ + ++ F+ A+ N Y H +S + + L+S +
Sbjct: 9 KWSKNITPSQVIKLMRAEKDVEKSMAVFDSAT--AEYANGYVHDQSSFGYMVLRLVSANK 66
Query: 93 FSTADSLLRRSNKLSDFLASKFI-----NAFGDRGDIRGAIHWFHKAKA--SGPCALSCN 145
F A+ L+ R K+ + + S+ I +G ++ FHK K P +
Sbjct: 67 FKAAEDLIVRM-KIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYV 125
Query: 146 AVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKM-GMVESARKVFDEM- 203
VL +LV N++NLA Y ++E + P V + +I+ C+ G V++ K+F EM
Sbjct: 126 TVLAILVEENQLNLAFKFYKN-MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMP 184
Query: 204 --RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
C+P++ TY T+I GLC+ G +D A ++F E K C P VVT+T+LI+G V
Sbjct: 185 KRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVE-KDCAPTVVTYTSLINGLCGSKNV 243
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
EA+ ++EM+ +G +PNV TY++L++GLC G +A + M +G + N+ T T++
Sbjct: 244 DEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTL 303
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
+ G C + +EA++ + M +G+ D Y +++ +C I K EA + L EM+ +
Sbjct: 304 ITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGI 363
Query: 382 KPS-------VSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
P+ V + N V R L A A L +M G S + ++ LCK K
Sbjct: 364 TPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETLESLVKCLCK-K 421
Query: 435 GR----MQLVEELVSS---------MLQSGHNLDATM 458
G +QLV+E+V+ L GH LD T+
Sbjct: 422 GEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTI 458
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 136/273 (49%), Gaps = 3/273 (1%)
Query: 228 AMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
++RVF++ + C P + T++ + ++ A K M+E G P V + N LI
Sbjct: 105 SLRVFHKMKDF-DCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 288 EGLCLS-GNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
+ LC + G VD ++ +M +G + T +++ G C GR +EA K EMV +
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
V Y+ ++N C EA+ L EM +K ++P+V +++++ L + + +A+
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGY 466
L + M GC PN ++Y+ +I GLCK + ++Q EL+ M G DA +Y ++ G+
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCK-EQKIQEAVELLDRMNLQGLKPDAGLYGKVISGF 342
Query: 467 CEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
C A + +MI N+ T+ VK
Sbjct: 343 CAISKFREAANFLDEMILGGITPNRLTWNIHVK 375
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 2/257 (0%)
Query: 254 GYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKD 313
GY + ++L +M++ C P+ Y ++ L ++ A + MR G+
Sbjct: 95 GYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPP 154
Query: 314 NVATNTSMLKGFCM-VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSI 372
VA+ ++K C G + +K EM RG D D Y +++ C+ G+ EA +
Sbjct: 155 TVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKL 214
Query: 373 LREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCK 432
EMV K P+V ++ ++ L + ++EA+ L+ M G PN +YS ++ GLCK
Sbjct: 215 FTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCK 274
Query: 433 VKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKD 492
GR EL M+ G + Y L+ G C++ + A++ + M + +
Sbjct: 275 -DGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAG 333
Query: 493 TYCTFVKELCAKGKVKE 509
Y + CA K +E
Sbjct: 334 LYGKVISGFCAISKFRE 350
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%)
Query: 356 IVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMG 415
I Y ++ +P +++ + +M PS ++ V +LV E +L A KNM +G
Sbjct: 92 ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIG 151
Query: 416 CSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMA 475
P S +++I LC+ G + ++ M + G + D+ Y L+ G C G + A
Sbjct: 152 LPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEA 211
Query: 476 LKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
K +M++K TY + + LC V E
Sbjct: 212 KKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDE 245
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 197/401 (49%), Gaps = 9/401 (2%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
I A +R AI + G P + V+ + ++ A I +Q+V+
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE----PNAITYNTMIHGLCKKGEMDG 227
+V + ++ GFCK G VE A EM + P+ T+NT+++GLCK G +
Sbjct: 255 CSWSNV-SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH 313
Query: 228 AMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
A+ + + + + PDV T+ ++I G K GEV+EA+ + +M + C PN VTYN LI
Sbjct: 314 AIEIMDVMLQ-EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMD 347
LC V+EA + + KGI +V T S+++G C+ A++ +EM S+G +
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
D Y+++++ C GK EA+++L++M SV ++N + K EA +
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492
Query: 408 LKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
M G S N ++Y+ +I GLCK + R++ +L+ M+ G D YN LL +C
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSR-RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 468 EDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
GD + A V M + TY T + LC G+V+
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 199/416 (47%), Gaps = 42/416 (10%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG---PCALSCNAVLGVLVRANRVNLAKAIYDQVVKE 170
++ F G + A+++ + P + N ++ L +A V A I D +++E
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 171 ALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDG 227
+PDV+TY ++I G CK+G V+ A +V D+M C PN +TYNT+I LCK+ +++
Sbjct: 325 G-YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 228 AMRV---------------FNRFAE-------------------SKSCRPDVVTFTTLID 253
A + FN + SK C PD T+ LID
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 254 GYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKD 313
+G++ EALN +K+M+ GC +V+TYN LI+G C + EA+ + +M + G+
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR 503
Query: 314 NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL 373
N T +++ G C R E+A + M +M+ G D Y+ ++ +C+ G +A I+
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV 563
Query: 374 REMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKV 433
+ M + +P + ++ + L ++E A LL+++ G + +Y+ VI GL +
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRK 623
Query: 434 KGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDE-EMALKTVYDMIDKSFL 488
+ + + + Q+ DA Y + G C G A+ + ++++K F+
Sbjct: 624 RKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFV 679
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 187/361 (51%), Gaps = 8/361 (2%)
Query: 97 DSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHK--AKASGPCALSCNAVLGVLVRA 154
D +L+ + + I+ G+++ A+ + + P ++ N ++ L +
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKE 378
Query: 155 NRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAIT 211
N+V A + + + ++ PDV T+ ++I+G C A ++F+EMR CEP+ T
Sbjct: 379 NQVEEATELARVLTSKGIL-PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 212 YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM 271
YN +I LC KG++D A+ + + E C V+T+ TLIDG+ K + +EA EM
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQM-ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 272 QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRS 331
+ G N VTYN LI+GLC S V++A ++M +M ++G K + T S+L FC G
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 332 EEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAV 391
++A ++ M S G + D+ Y +++ CK G+ A +LR + K + + ++N V
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPV 616
Query: 392 FRVLVAERKLEEAVLLLKNMPRMG-CSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS 450
+ L +RK EA+ L + M P+ +SY IV GLC G ++ + + +L+
Sbjct: 617 IQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEK 676
Query: 451 G 451
G
Sbjct: 677 G 677
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 195/374 (52%), Gaps = 5/374 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + N ++ L RA+++ A + + + LV PD T+TT+++G+ + G ++ A +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLV-PDEKTFTTVMQGYIEEGDLDGALR 245
Query: 199 VFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+ ++M C + ++ N ++HG CK+G ++ A+ + PD TF TL++G
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G V+ A+ M M ++G P+V TYN++I GLC G V EA ++ +M + N
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNT 365
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T +++ C + EEA + + + S+G+ DV ++ ++ C A+ + E
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
M +K +P ++N + L ++ KL+EA+ +LK M GC+ + ++Y+ +I G CK
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN- 484
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYC 495
+ + EE+ M G + ++ YN L+ G C+ E A + + MI + +K TY
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 496 TFVKELCAKGKVKE 509
+ + C G +K+
Sbjct: 545 SLLTHFCRGGDIKK 558
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 232/522 (44%), Gaps = 61/522 (11%)
Query: 40 PSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADS- 98
P ++Q + TH+ F+ P + +++ P S + TDV L SL S D
Sbjct: 11 PFSISQAVTLTHHS------FSLNLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDS 64
Query: 99 -------------------------LLR--RSNKLSDFL--------------ASKFI-- 115
LLR RS D S F+
Sbjct: 65 AALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLIL 124
Query: 116 ----NAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
F + +I + W P N +L +LV N + L + + ++
Sbjct: 125 IESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWG 184
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGA 228
++PDV T+ +I+ C+ + A + ++M P+ T+ T++ G ++G++DGA
Sbjct: 185 -IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQ-GCQPNVVTYNALI 287
+R+ + E C V+ ++ G+ K G V++ALN ++EM Q G P+ T+N L+
Sbjct: 244 LRIREQMVEF-GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMD 347
GLC +G+V A +M M +G +V T S++ G C +G +EA++ + +M++R
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
+ Y+ +++ CK + EA + R + +K + P V +FN++ + L R A+ L
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 408 LKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
+ M GC P+ +Y+++I LC KG++ ++ M SG YN L+ G+C
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCS-KGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 468 EDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ A + +M N TY T + LC +V++
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 195/391 (49%), Gaps = 55/391 (14%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + + VL L A+++ LA +++++ + LV DV+TYT M+ FCK G++E ARK
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV-ADVYTYTIMVDSFCKAGLIEQARK 539
Query: 199 VFDEMR---CEPNAITYNTMIH-----------------------------------GLC 220
F+EMR C PN +TY +IH G C
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599
Query: 221 KKGEMDGAMRVFNRFAESK---------------SCRPDVVTFTTLIDGYSKRGEVQEAL 265
K G+++ A ++F R SK S RP+VVT+ L+DG+ K V+EA
Sbjct: 600 KAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR 659
Query: 266 NCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGF 325
+ M +GC+PN + Y+ALI+GLC G +DEA+ + ++M G + T +S++ +
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Query: 326 CMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSV 385
V R + A K + +M+ +V Y+ +++ CK+GK EA +++ M K +P+V
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
Query: 386 SSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVS 445
++ A+ K+E + LL+ M G +PN+++Y ++I CK G + + L+
Sbjct: 780 VTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK-NGALDVAHNLLE 838
Query: 446 SMLQSGHNLDATMYNCLLGGYCEDGDEEMAL 476
M Q+ Y ++ G+ ++ E + L
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGFNKEFIESLGL 869
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/503 (25%), Positives = 226/503 (44%), Gaps = 66/503 (13%)
Query: 68 PNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSD-FLASKFINAFGDRGDIRG 126
P+ + YS + + + L+ LF ++R ++D + + +++F G I
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEE----MKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 127 AIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKE----------ALVE 174
A WF++ + G P ++ A++ ++A +V+ A +++ ++ E AL++
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 175 ----------------------------------------PDVFTYTTMIRGFCKMGMVE 194
P+V TY ++ GFCK VE
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 195 SARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTL 251
ARK+ D M CEPN I Y+ +I GLCK G++D A V +E + T+++L
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE-HGFPATLYTYSSL 715
Query: 252 IDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
ID Y K A + +M E C PNVV Y +I+GLC G DEA ++M M KG
Sbjct: 716 IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC 775
Query: 312 KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVS 371
+ NV T T+M+ GF M+G+ E ++ ++ M S+G+ + Y V+++ CK G A +
Sbjct: 776 QPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHN 835
Query: 372 ILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLC 431
+L EM + + V ++ E++ LL + + +P Y ++I L
Sbjct: 836 LLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLI 893
Query: 432 KVKGRMQLVEELVSSMLQSGHNL--DATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF 489
K + R+++ L+ + L ++ YN L+ C E A + +M K +
Sbjct: 894 KAQ-RLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIP 952
Query: 490 NKDTYCTFVKELCAKGKVKEEYL 512
++C+ +K L K+ E L
Sbjct: 953 EMQSFCSLIKGLFRNSKISEALL 975
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 207/491 (42%), Gaps = 52/491 (10%)
Query: 31 LKKFSCYLTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSH 90
L++F L+ SLV +V++ P + FF WA Y H Y A+ D+++
Sbjct: 123 LRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQI----GYKHTAPVYNALVDLIVRD 178
Query: 91 SLFSTADSLLRRSNKLSDFLASKFINAFGDR----GDIRGAIHWFHKAK--ASGPCALSC 144
+ L++ + +F+N + G A+ + K P +
Sbjct: 179 DDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTY 238
Query: 145 NAVLGVLVRANRVNLAKAIYDQV------------------------VKEA--LVE---- 174
N ++ ++A+R++ A I+ ++ +EA LVE
Sbjct: 239 NCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENF 298
Query: 175 -PDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMR 230
PD YT +I G C+ + E A + MR C PN +TY+T++ G K ++ R
Sbjct: 299 VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKR 358
Query: 231 VFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGL 290
V N + C P F +L+ Y G+ A +K+M + G P V YN LI +
Sbjct: 359 VLNMMM-MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417
Query: 291 CLSGN------VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
C + +D A++ S+M G+ N +S + C G+ E+A ++EM+ +
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA 404
G D YS ++N C K A + EM + V ++ + +E+A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 405 VLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLG 464
M +GC+PN ++Y+ +I K K ++ EL +ML G + Y+ L+
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAK-KVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 465 GYCEDGDEEMA 475
G+C+ G E A
Sbjct: 597 GHCKAGQVEKA 607
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 180/409 (44%), Gaps = 33/409 (8%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVL------VRANRVNLAKAIYD 165
++A+ GD A K G P + N ++G + + + ++LA+ Y
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437
Query: 166 QVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKK 222
+++ +V + ++ R C G E A V EM + P+ TY+ +++ LC
Sbjct: 438 EMLAAGVVLNKI-NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA 496
Query: 223 GEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVT 282
+M+ A +F DV T+T ++D + K G +++A EM+E GC PNVVT
Sbjct: 497 SKMELAFLLFEEMKRG-GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555
Query: 283 YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
Y ALI + V A + M +G N+ T ++++ G C G+ E+A + + M
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLE 402
DV Y ++ +P+V ++ A+ ++E
Sbjct: 616 GSKDVPDVDMY-------------------FKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 403 EAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCL 462
EA LL M GC PN + Y +I GLCKV G++ +E+ + M + G Y+ L
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKV-GKLDEAQEVKTEMSEHGFPATLYTYSSL 715
Query: 463 LGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
+ Y + +++A K + M++ S N Y + LC GK E Y
Sbjct: 716 IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 165/422 (39%), Gaps = 60/422 (14%)
Query: 105 KLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIY 164
KLS+ L + + + W + A NA++ ++VR + + +
Sbjct: 129 KLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFL 188
Query: 165 DQVVKEALVEPDVFT--YTTMIRGFCKMGMVESARKVF---DEMRCEPNAITYNTMIHGL 219
Q+ + + +VF ++R C+ G A + + R P+ TYN +I
Sbjct: 189 QQIRDD---DKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAF 245
Query: 220 CKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPN 279
K +D A + +R + R D T K G+ +EAL + + + P+
Sbjct: 246 LKADRLDSA-SLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV---ETENFVPD 301
Query: 280 VVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM----VGRSEEAI 335
V Y LI GLC + +EA +++MR NV T +++L G C+ +GR + +
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG-CLNKKQLGRCKRVL 360
Query: 336 KHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVL 395
M + G K ++ +V+ YC G S A
Sbjct: 361 NMM---MMEGCYPSPKIFNSLVHAYCTSGDHSYAYK------------------------ 393
Query: 396 VAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRM-----QLVEELVSSMLQS 450
LLK M + G P ++ Y+I+I +C K + L E+ S ML +
Sbjct: 394 -----------LLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442
Query: 451 GHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEE 510
G L+ + C G E A + +MI + F+ + TY + LC K++
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502
Query: 511 YL 512
+L
Sbjct: 503 FL 504
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 197/380 (51%), Gaps = 9/380 (2%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ +++ NR+ A ++ +Q+V E ++PDV YTT+I CK G V A
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMV-EMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+FD+M P+ + Y ++++GLC G A + R + +PDV+TF LID +
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL-RGMTKRKIKPDVITFNALIDAF 257
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G+ +A EM PN+ TY +LI G C+ G VDEA++M M KG +V
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
TS++ GFC + ++A+K EM +G+ + Y+ ++ + ++GKP+ A +
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRM---GCSPNFLSYSIVICGLCK 432
MV++ + P++ ++N + L K+++A+++ ++M + G +PN +Y++++ GLC
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC- 436
Query: 433 VKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKD 492
G+++ + M + ++ Y ++ G C+ G + A+ + K N
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496
Query: 493 TYCTFVKELCAKGKVKEEYL 512
TY T + L +G E ++
Sbjct: 497 TYTTMISGLFREGLKHEAHV 516
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 190/383 (49%), Gaps = 43/383 (11%)
Query: 41 SLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLL 100
+++ + KN H ++AL F+ N P+ Y ++ + L + + ADSLL
Sbjct: 182 TIIDSLCKNGH-VNYALSLFDQMENYGIRPD-----VVMYTSLVNGLCNSGRWRDADSLL 235
Query: 101 RRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLA 160
R K + P ++ NA++ V+ + A
Sbjct: 236 RGMTK-----------------------------RKIKPDVITFNALIDAFVKEGKFLDA 266
Query: 161 KAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIH 217
+ +Y+++++ + + P++FTYT++I GFC G V+ AR++F M C P+ + Y ++I+
Sbjct: 267 EELYNEMIRMS-IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLIN 325
Query: 218 GLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQ 277
G CK ++D AM++F ++ K + +T+TTLI G+ + G+ A M +G
Sbjct: 326 GFCKCKKVDDAMKIFYEMSQ-KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 278 PNVVTYNALIEGLCLSGNVDEAKRM---MSKMRLKGIKDNVATNTSMLKGFCMVGRSEEA 334
PN+ TYN L+ LC +G V +A + M K + G+ N+ T +L G C G+ E+A
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Query: 335 IKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRV 394
+ ++M R MD+ + Y++I+ CK GK AV++ + +K +KP+V ++ +
Sbjct: 445 LMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
Query: 395 LVAERKLEEAVLLLKNMPRMGCS 417
L E EA +L + M G S
Sbjct: 505 LFREGLKHEAHVLFRKMKEDGVS 527
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 166/338 (49%), Gaps = 5/338 (1%)
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDE---MRCEPNAITYNTMIHGLCKKGEMDGAMRV 231
P + +T ++ KM + + D M + T N +++ C+ + A
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 232 FNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLC 291
+ + PD+VTFT+LI+G+ ++EA++ + +M E G +P+VV Y +I+ LC
Sbjct: 130 LGKMMKL-GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188
Query: 292 LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
+G+V+ A + +M GI+ +V TS++ G C GR +A ++ M R + DV
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 352 AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
++ +++ + K GK +A + EM+ + P++ ++ ++ E ++EA + M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 412 PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGD 471
GC P+ ++Y+ +I G CK K ++ ++ M Q G + Y L+ G+ + G
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCK-KVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 472 EEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+A + M+ + N TY + LC GKVK+
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 112/250 (44%), Gaps = 1/250 (0%)
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
+ EAL+ M E P+++ + L+ + D + +++ G+ ++ T
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
++ FC + A + +M+ G + D+ ++ ++N +C + EA+S++ +MV
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
+KP V + + L + A+ L M G P+ + Y+ ++ GLC GR +
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN-SGRWRD 230
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
+ L+ M + D +N L+ + ++G A + +MI S N TY + +
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 500 ELCAKGKVKE 509
C +G V E
Sbjct: 291 GFCMEGCVDE 300
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 197/365 (53%), Gaps = 11/365 (3%)
Query: 153 RANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD---EMRCEPNA 209
R ++++LA AI +++K P + T +++ GFC + A + D EM +P+
Sbjct: 122 RRSQLSLALAILGKMMKLG-YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 180
Query: 210 ITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK 269
+T+ T++HGL + + A+ + R K C+PD+VT+ +I+G KRGE ALN +
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMV-VKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 239
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG 329
+M++ + +VV YN +I+GLC ++D+A + +KM KGIK +V T ++ C G
Sbjct: 240 KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
Query: 330 RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMV-AKRMKPSVSSF 388
R +A + + +M+ + ++ D+ ++ +++ + K GK EA + EMV +K P V ++
Sbjct: 300 RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY 359
Query: 389 NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG--RMQLVEELVSS 446
N + + +++EE + + + M + G N ++Y+ +I G + + Q+V
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV---FKQ 416
Query: 447 MLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGK 506
M+ G + D YN LL G C +G+ E AL M + + TY T ++ LC GK
Sbjct: 417 MVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476
Query: 507 VKEEY 511
V++ +
Sbjct: 477 VEDGW 481
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 136/524 (25%), Positives = 224/524 (42%), Gaps = 81/524 (15%)
Query: 64 SNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGD 123
S P P+ +S S A + L SL +L N + S FIN F R
Sbjct: 69 SRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL---YTYSIFINYFCRRSQ 125
Query: 124 IRGAIHWFHKAK--ASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKE----------- 170
+ A+ K GP ++ N++L NR++ A A+ DQ+V+
Sbjct: 126 LSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTT 185
Query: 171 ---------------ALVE--------PDVFTYTTMIRGFCKMGMVESARKVFDEM---R 204
ALVE PD+ TY +I G CK G + A + ++M +
Sbjct: 186 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 245
Query: 205 CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVT----------------- 247
E + + YNT+I GLCK MD A +FN+ E+K +PDV T
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKM-ETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 248 ------------------FTTLIDGYSKRGEVQEALNCMKEM-QEQGCQPNVVTYNALIE 288
F LID + K G++ EA EM + + C P+VV YN LI+
Sbjct: 305 SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
G C V+E + +M +G+ N T T+++ GF + A K+MVS G+
Sbjct: 365 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 424
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
D+ Y+++++ C G A+ + M + MK + ++ + L K+E+ L
Sbjct: 425 DIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Query: 409 KNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCE 468
++ G PN ++Y+ ++ G C+ KG + + L M + G ++ YN L+
Sbjct: 485 CSLSLKGVKPNVVTYTTMMSGFCR-KGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLR 543
Query: 469 DGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYL 512
DGDE + + + +M F + T+ V + G++ + +L
Sbjct: 544 DGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKSFL 586
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 114/269 (42%), Gaps = 49/269 (18%)
Query: 224 EMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTY 283
++D A+ +F +S+ P +V F+ L+ +K + ++ ++MQ G N+ TY
Sbjct: 55 KLDDAIGLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY 113
Query: 284 NALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVS 343
+ I C + A ++ KM G ++ T S+L GF
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGF------------------ 155
Query: 344 RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEE 403
C + SEAV+++ +MV +P +F + L K E
Sbjct: 156 -----------------CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASE 198
Query: 404 AVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLL 463
AV L++ M GC P+ ++Y VI GLCK +G L L++ M + D +YN ++
Sbjct: 199 AVALVERMVVKGCQPDLVTYGAVINGLCK-RGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 464 GGYCEDGDEEMALKTVYDMIDKSF-LFNK 491
G C+ Y +D +F LFNK
Sbjct: 258 DGLCK-----------YKHMDDAFDLFNK 275
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 182/353 (51%), Gaps = 6/353 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ ++L NR+ A ++ +VK EP+V Y T+I G CK G + A +
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY-EPNVVVYNTLIDGLCKNGELNIALE 197
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+ +EM + +TYNT++ GLC G A R+ R +S PDVVTFT LID +
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML-RDMMKRSINPDVVTFTALIDVF 256
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K+G + EA KEM + PN VTYN++I GLC+ G + +AK+ M KG NV
Sbjct: 257 VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T +++ GFC +E +K + M G + D+ Y+ +++ YC++GK A+ I
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCW 376
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
MV++R+ P + + + L ++E A++ +M ++Y+I+I GLCK
Sbjct: 377 MVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKAD- 435
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFL 488
+++ EL + G DA Y ++ G C++G A + + M ++ +
Sbjct: 436 KVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 160/306 (52%), Gaps = 8/306 (2%)
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKE 270
++ +IH C+ + A+ V + + P +VTF +L+ G+ + +A + +
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMK-LGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166
Query: 271 MQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGR 330
M + G +PNVV YN LI+GLC +G ++ A ++++M KG+ +V T ++L G C GR
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 331 SEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNA 390
+A + +++M+ R ++ DV ++ +++ + K G EA + +EM+ + P+ ++N+
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 391 VFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEE---LVSSM 447
+ L +L +A M GC PN ++Y+ +I G CK + +V+E L M
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR----MVDEGMKLFQRM 342
Query: 448 LQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKV 507
G N D YN L+ GYC+ G +AL M+ + + T+C + LC G++
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 508 KEEYLK 513
+ +K
Sbjct: 403 ESALVK 408
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 172/346 (49%), Gaps = 5/346 (1%)
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAM 229
+ D++++T +I FC+ + A V +M EP+ +T+ +++HG C + A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
+ +S P+VV + TLIDG K GE+ AL + EM+++G +VVTYN L+ G
Sbjct: 162 SLVILMVKS-GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
LC SG +A RM+ M + I +V T T+++ F G +EA + KEM+ +D +
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
Y+ I+N C G+ +A M +K P+V ++N + R ++E + L +
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
M G + + +Y+ +I G C+V G++++ ++ M+ D + LL G C +
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQV-GKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLKRC 515
G+ E AL DM + Y + LC KV++ + C
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFC 445
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 131/250 (52%), Gaps = 10/250 (4%)
Query: 99 LLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANR 156
+++RS + I+ F +G++ A + + S P ++ N+++ L R
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296
Query: 157 VNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYN 213
+ AK +D + + P+V TY T+I GFCK MV+ K+F M CE + TYN
Sbjct: 297 LYDAKKTFDLMASKGCF-PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355
Query: 214 TMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQE 273
T+IHG C+ G++ A+ +F + S+ PD++T L+ G GE++ AL +M+E
Sbjct: 356 TLIHGYCQVGKLRVALDIFC-WMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414
Query: 274 QGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG---R 330
+V YN +I GLC + V++A + ++ ++G+K + T T M+ G C G
Sbjct: 415 SEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRRE 474
Query: 331 SEEAIKHMKE 340
++E I+ MKE
Sbjct: 475 ADELIRRMKE 484
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 215/429 (50%), Gaps = 23/429 (5%)
Query: 98 SLLRRSNKLSDFLASKFINAFGDRG------------DIRG--AIHWFHKAKASGP--CA 141
+L+ N+LS F + +AF DR DI+ AI F S P
Sbjct: 30 ALINCPNELS-FCCERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTV 88
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFC---KMGMVESARK 198
+ + + + + + +L A+ Q+ + + +++T + MI FC K+ + SA
Sbjct: 89 IDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH-NLYTLSIMINCFCRCRKLCLAFSAMG 147
Query: 199 VFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
++ EPN IT++T+I+GLC +G + A+ + +R E +PD++T TL++G
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH-KPDLITINTLVNGLCLS 206
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
G+ EA+ + +M E GCQPN VTY ++ +C SG A ++ KM + IK +
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
+ ++ G C G + A EM +G+ ++ Y++++ +C G+ + +LR+M+
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 379 KRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQ 438
+++ P+V +F+ + V E KL EA L K M G +P+ ++Y+ +I G CK + +
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK-ENHLD 385
Query: 439 LVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
++V M+ G + + +N L+ GYC+ + L+ M + + + TY T +
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 499 KELCAKGKV 507
+ C GK+
Sbjct: 446 QGFCELGKL 454
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 202/411 (49%), Gaps = 40/411 (9%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P A++ VL V+ ++ + LA + ++ +E ++ D Y+ +I G CK G +++A
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 199 VFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFN---------------------- 233
+F+EM + N ITYN +I G C G D ++
Sbjct: 285 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344
Query: 234 -----RFAES-------KSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVV 281
R AE + PD +T+T+LIDG+ K + +A + M +GC PN+
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404
Query: 282 TYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEM 341
T+N LI G C + +D+ + KM L+G+ + T ++++GFC +G+ A + +EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 342 VSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKL 401
VSR + ++ Y ++++ C G+ +A+ I ++ +M+ + +N + + K+
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524
Query: 402 EEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNC 461
++A L ++P G P +Y+I+I GLCK KG + E L M + GH D YN
Sbjct: 525 DDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK-KGPLSEAELLFRKMEEDGHAPDGWTYNI 583
Query: 462 LLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYL 512
L+ + DGD ++K + ++ F + T V ++ + G++K+ +L
Sbjct: 584 LIRAHLGDGDATKSVKLIEELKRCGFSVDASTI-KMVIDMLSDGRLKKSFL 633
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 199/425 (46%), Gaps = 8/425 (1%)
Query: 93 FSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGV 150
FS +++ + + S IN G + A+ + G P ++ N ++
Sbjct: 143 FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNG 202
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVF---DEMRCEP 207
L + + A + D++V E +P+ TY ++ CK G A ++ +E +
Sbjct: 203 LCLSGKEAEAMLLIDKMV-EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
+A+ Y+ +I GLCK G +D A +FN E K +++T+ LI G+ G +
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKL 320
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM 327
+++M ++ PNVVT++ LI+ G + EA+ + +M +GI + T TS++ GFC
Sbjct: 321 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK 380
Query: 328 VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSS 387
++A + + MVS+G D +++ +++++N YCK + + + + R+M + + +
Sbjct: 381 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 440
Query: 388 FNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM 447
+N + + KL A L + M PN ++Y I++ GLC G + E+ +
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD-NGESEKALEIFEKI 499
Query: 448 LQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKV 507
+S LD +YN ++ G C + A + K TY + LC KG +
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 508 KEEYL 512
E L
Sbjct: 560 SEAEL 564
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Query: 365 KPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYS 424
K +A+ + R+M+ R P+V F+ +F + ++ + + L K M G + N + S
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 425 IVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMID 484
I+I C+ + ++ L + +++ G+ + ++ L+ G C +G AL+ V M++
Sbjct: 128 IMINCFCRCR-KLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 485 KSFLFNKDTYCTFVKELCAKGKVKEEYL 512
+ T T V LC GK E L
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAML 214
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 195/377 (51%), Gaps = 8/377 (2%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL-VEPDVFTYTTMIRGFCKMGMVESAR 197
P + N +L +V+ + ++ ++ ++ E L + D++T+ +I FC V A
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKM--EVLGIRNDLYTFNIVINCFCCCFQVSLAL 140
Query: 198 KVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDG 254
+ +M EP+ +T ++++G C++ + A+ + ++ E +PD+V + +ID
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI-GYKPDIVAYNAIIDS 199
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
K V +A + KE++ +G +PNVVTY AL+ GLC S +A R++S M K I N
Sbjct: 200 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 259
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
V T +++L F G+ EA + +EMV +D D+ YS ++N C + EA +
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
MV+K V S+N + +++E+ + L + M + G N ++Y+ +I G +
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA- 378
Query: 435 GRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTY 494
G + +E S M G + D YN LLGG C++G+ E AL DM + + TY
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 495 CTFVKELCAKGKVKEEY 511
T ++ +C GKV+E +
Sbjct: 439 TTVIRGMCKTGKVEEAW 455
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 176/334 (52%), Gaps = 16/334 (4%)
Query: 124 IRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYT 181
+ A +F + + G P ++ A++ L ++R + A + ++K+ + P+V TY+
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK-ITPNVITYS 264
Query: 182 TMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAES 238
++ F K G V A+++F+EM +P+ +TY+++I+GLC +D A ++F+ S
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV-S 323
Query: 239 KSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDE 298
K C DVV++ TLI+G+ K V++ + +EM ++G N VTYN LI+G +G+VD+
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 299 AKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVN 358
A+ S+M GI ++ T +L G C G E+A+ ++M R MDLD+ Y+ ++
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 359 EYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSP 418
CK GK EA S+ + K +KP + ++ + L + L E L M + G
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMK 503
Query: 419 NFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGH 452
N + S G + L EL+ ML G+
Sbjct: 504 NDCTLS---------DGDITLSAELIKKMLSCGY 528
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 180/357 (50%), Gaps = 6/357 (1%)
Query: 156 RVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD---EMRCEPNAITY 212
+V+LA +I +++K EPD T +++ GFC+ V A + D E+ +P+ + Y
Sbjct: 135 QVSLALSILGKMLKLG-YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAY 193
Query: 213 NTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQ 272
N +I LCK ++ A F E K RP+VVT+T L++G +A + +M
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 273 EQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSE 332
++ PNV+TY+AL++ +G V EAK + +M I ++ T +S++ G C+ R +
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 333 EAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVF 392
EA + MVS+G DV +Y+ ++N +CK + + + + REM + + + ++N +
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 393 RVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGH 452
+ +++A M G SP+ +Y+I++ GLC G ++ + M +
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD-NGELEKALVIFEDMQKREM 431
Query: 453 NLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+LD Y ++ G C+ G E A + K + TY T + LC KG + E
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 202/438 (46%), Gaps = 43/438 (9%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
IN F R I A+ K G P ++ +++L R++ A A+ DQ+V E
Sbjct: 51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV-EM 109
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGA 228
PD T+TT+I G A + D M C+PN +TY +++GLCK+G++D A
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTY----- 283
+ N+ E+ DVV F T+ID K V +ALN KEM+ +G +PNVVTY
Sbjct: 170 FNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
Query: 284 ------------------------------NALIEGLCLSGNVDEAKRMMSKMRLKGIKD 313
NALI+ G EA+++ M + I
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 314 NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL 373
++ T S++ GFCM R ++A + + MVS+ D+ Y+ ++ +CK + + +
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 374 REMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKV 433
REM + + ++ + + L + + A + K M G P+ ++YSI++ GLC
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN- 407
Query: 434 KGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDT 493
G+++ E+ M +S LD +Y ++ G C+ G + + K N T
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 467
Query: 494 YCTFVKELCAKGKVKEEY 511
Y T + LC+K ++E Y
Sbjct: 468 YNTMISGLCSKRLLQEAY 485
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 190/370 (51%), Gaps = 6/370 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P N +L + + + +L ++ +++ + + +++TY +I FC+ + A
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG-ISHNLYTYNILINCFCRRSQISLALA 66
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+ +M EP+ +T +++++G C + A+ + ++ E RPD +TFTTLI G
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE-MGYRPDTITFTTLIHGL 125
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+ EA+ + M ++GCQPN+VTY ++ GLC G++D A +++KM I+ +V
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
+++ C ++A+ KEM ++G+ +V YS +++ C G+ S+A +L +
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
M+ K++ P++ +FNA+ V E K EA L +M + P+ +Y+ +I G C +
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC-MHD 304
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYC 495
R+ +++ M+ D YN L+ G+C+ E + +M + + + TY
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 496 TFVKELCAKG 505
T ++ L G
Sbjct: 365 TLIQGLFHDG 374
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 199/412 (48%), Gaps = 30/412 (7%)
Query: 41 SLVTQVIKNTHNPH--------HALFFFNWASNP------------QPNPNNYSHPRSCY 80
+LV Q+++ + P H LF N AS QPN Y +
Sbjct: 101 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 160
Query: 81 AAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG-- 138
D+ L+ +L + ++ ++ + + + I++ + A++ F + + G
Sbjct: 161 CKRGDIDLAFNLLNKMEAAKIEADVV---IFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ ++++ L R + A + ++ E + P++ T+ +I F K G A K
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEK 276
Query: 199 VFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+ D+M +P+ TYN++I+G C +D A ++F F SK C PD+ T+ TLI G+
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF-EFMVSKDCFPDLDTYNTLIKGF 335
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K V++ +EM +G + VTY LI+GL G+ D A+++ +M G+ ++
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T + +L G C G+ E+A++ M + LD+ Y+ ++ CK GK + +
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI 427
+ K +KP+V ++N + L ++R L+EA LLK M G P+ +Y+ +I
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 214/445 (48%), Gaps = 18/445 (4%)
Query: 82 AITDVLLSHSLF---------STADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFH 132
IT L H LF + D +++R + + +N RGDI A + +
Sbjct: 115 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 174
Query: 133 KAKASGPCA--LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKM 190
K +A+ A + N ++ L + V+ A ++ ++ + + P+V TY+++I C
Sbjct: 175 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSY 233
Query: 191 GMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVT 247
G A ++ +M + PN +T+N +I K+G+ A ++ + + +S PD+ T
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK-RSIDPDIFT 292
Query: 248 FTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR 307
+ +LI+G+ + +A + M + C P++ TYN LI+G C S V++ + +M
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Query: 308 LKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPS 367
+G+ + T T++++G G + A K K+MVS G+ D+ YS++++ C GK
Sbjct: 353 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 412
Query: 368 EAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI 427
+A+ + M +K + + + + K+++ L ++ G PN ++Y+ +I
Sbjct: 413 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 428 CGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSF 487
GLC K +Q L+ M + G D+ YN L+ + DGD+ + + + +M F
Sbjct: 473 SGLCS-KRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 531
Query: 488 LFNKDTYCTFVKELCAKGKVKEEYL 512
+ + T V + G++ + +L
Sbjct: 532 VGDAST-IGLVANMLHDGRLDKSFL 555
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 174/349 (49%), Gaps = 19/349 (5%)
Query: 67 QPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRR--SNKLSDFLAS--KFINAFGDRG 122
+PN YS SC L S+ +S A LL K++ L + I+AF G
Sbjct: 217 RPNVVTYSSLISC-------LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Query: 123 DIRGA--IHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTY 180
A +H ++ P + N+++ +R++ AK +++ +V + PD+ TY
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-PDLDTY 328
Query: 181 TTMIRGFCKMGMVESARKVFDEMRCEP---NAITYNTMIHGLCKKGEMDGAMRVFNRFAE 237
T+I+GFCK VE ++F EM + +TY T+I GL G+ D A +VF +
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV- 387
Query: 238 SKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVD 297
S PD++T++ L+DG G++++AL MQ+ + ++ Y +IEG+C +G VD
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Query: 298 EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIV 357
+ + + LKG+K NV T +M+ G C +EA +K+M G D Y+ ++
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Query: 358 NEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
+ + G + + ++REM + R S+ V +L + +L+++ L
Sbjct: 508 RAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKSFL 555
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
MV R PS+ FN + + +K + + L + M R+G S N +Y+I+I C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCR-RS 59
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYC 495
++ L L+ M++ G+ + LL GYC A+ V M++ + + T+
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 496 TFVKELCAKGKVKE 509
T + L K E
Sbjct: 120 TLIHGLFLHNKASE 133
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 219/485 (45%), Gaps = 76/485 (15%)
Query: 98 SLLRRSNKLSD-FLASKFINAFGDR--GDIRGAIHWFHKAKASGPCALSCNAVLGVLVRA 154
S LR+S+ L D F +K I+ + G + + ++ P S N+V+ + +
Sbjct: 10 SRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKL 69
Query: 155 NRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---------- 204
+V A+ I + + EPDV +Y ++I G C+ G + SA V + +R
Sbjct: 70 GQVKFAEDIVHSMPRFG-CEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPD 128
Query: 205 ------------------------------CEPNAITYNTMIHGLCKKGEMDGAMRVFNR 234
C PN +TY+T I CK GE+ A++ F+
Sbjct: 129 IVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHS 188
Query: 235 FAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSG 294
+ + P+VVTFT LIDGY K G+++ A++ KEM+ NVVTY ALI+G C G
Sbjct: 189 M-KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKG 247
Query: 295 NVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYS 354
+ A+ M S+M ++ N T+++ GF G S+ A+K + +M+++GM LD+ AY
Sbjct: 248 EMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYG 307
Query: 355 VIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRM 414
VI++ C GK EA I+ +M + P + F + +++ AV + +
Sbjct: 308 VIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER 367
Query: 415 GCSPNFLS------------------------------YSIVICGLCKVKGRMQLVEELV 444
G P+ ++ Y+++I LCK +G VE L
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCK-EGDFIEVERLF 426
Query: 445 SSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAK 504
S + ++G D MY + G C+ G+ A K M+ + L + Y T + L +K
Sbjct: 427 SKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASK 486
Query: 505 GKVKE 509
G + E
Sbjct: 487 GLMVE 491
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 180/381 (47%), Gaps = 36/381 (9%)
Query: 135 KASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVE 194
K P ++ + + ++ + LA + + ++AL P+V T+T +I G+CK G +E
Sbjct: 157 KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDAL-SPNVVTFTCLIDGYCKAGDLE 215
Query: 195 SARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTL 251
A ++ EMR N +TY +I G CKKGEM A +++R E + P+ + +TT+
Sbjct: 216 VAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDR-VEPNSLVYTTI 274
Query: 252 IDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
IDG+ +RG+ A+ + +M QG + ++ Y +I GLC +G + EA ++ M +
Sbjct: 275 IDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDL 334
Query: 312 KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKA------------------- 352
++ T+M+ + GR + A+ +++ RG + DV A
Sbjct: 335 VPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIV 394
Query: 353 -----------YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKL 401
Y+V+++ CK G E + ++ + P + + L + L
Sbjct: 395 YFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNL 454
Query: 402 EEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNC 461
+A L M + G + L+Y+ +I GL KG M ++ ML SG + D+ +++
Sbjct: 455 VDAFKLKTRMVQEGLLLDLLAYTTLIYGLAS-KGLMVEARQVFDEMLNSGISPDSAVFDL 513
Query: 462 LLGGYCEDGDEEMALKTVYDM 482
L+ Y ++G+ A + DM
Sbjct: 514 LIRAYEKEGNMAAASDLLLDM 534
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 162/373 (43%), Gaps = 70/373 (18%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAK--ASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
S +I+ F G+++ A+ FH K A P ++ ++ +A + +A ++Y ++ +
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM-R 225
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMD 226
+ +V TYT +I GFCK G ++ A +++ M R EPN++ Y T+I G ++G+ D
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 227 GAMRVFNRF----------------------------------AESKSCRPDVVTFTTLI 252
AM+ + E PD+V FTT++
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Query: 253 DGYSKRGEVQEALNCMKEMQEQGCQPNVVT------------------------------ 282
+ Y K G ++ A+N ++ E+G +P+VV
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM 405
Query: 283 YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
Y LI+ LC G+ E +R+ SK+ G+ + TS + G C G +A K MV
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV 465
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLE 402
G+ LD+ AY+ ++ G EA + EM+ + P + F+ + R E +
Sbjct: 466 QEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMA 525
Query: 403 EAVLLLKNMPRMG 415
A LL +M R G
Sbjct: 526 AASDLLLDMQRRG 538
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 158/324 (48%), Gaps = 9/324 (2%)
Query: 192 MVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTF 248
MV A + +R P+ T N IH L +++ F + S+ P +F
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLK-FLAYLVSRGYTPHRSSF 59
Query: 249 TTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRL 308
+++ K G+V+ A + + M GC+P+V++YN+LI+G C +G++ A ++ +R
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRA 119
Query: 309 KG---IKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGK 365
K ++ + S+ GF + +E +M M+ + +V YS ++ +CK G+
Sbjct: 120 SHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGE 178
Query: 366 PSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSI 425
A+ M + P+V +F + LE AV L K M R+ S N ++Y+
Sbjct: 179 LQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTA 238
Query: 426 VICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDK 485
+I G CK KG MQ EE+ S M++ ++ +Y ++ G+ + GD + A+K + M+++
Sbjct: 239 LIDGFCK-KGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297
Query: 486 SFLFNKDTYCTFVKELCAKGKVKE 509
+ Y + LC GK+KE
Sbjct: 298 GMRLDITAYGVIISGLCGNGKLKE 321
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 136/284 (47%), Gaps = 20/284 (7%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRA----NRVNLAKAIYDQV 167
+ I+ F RGD A+ + K G L A GV++ ++ A I + +
Sbjct: 272 TTIIDGFFQRGDSDNAMKFLAKMLNQG-MRLDITA-YGVIISGLCGNGKLKEATEIVEDM 329
Query: 168 VKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD---EMRCEPNAITYNTMIHGLCKKGE 224
K LV PD+ +TTM+ + K G +++A ++ E EP+ + +TMI G+ K G+
Sbjct: 330 EKSDLV-PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQ 388
Query: 225 MDGAMRVFNRFAESKSC--RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVT 282
+ A+ F C + + V +T LID K G+ E ++ E G P+
Sbjct: 389 LHEAIVYF--------CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFM 440
Query: 283 YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
Y + I GLC GN+ +A ++ ++M +G+ ++ T+++ G G EA + EM+
Sbjct: 441 YTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEML 500
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVS 386
+ G+ D + +++ Y K G + A +L +M + + +VS
Sbjct: 501 NSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVS 544
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 210/431 (48%), Gaps = 13/431 (3%)
Query: 88 LSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCAL--SCN 145
+S +F +A + S KL D S I ++ + GD + + + S
Sbjct: 59 ISEKMFKSAPKM--GSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFI 116
Query: 146 AVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD---- 201
V +A+ + A ++ ++V E + V ++ +++ G+ + +D
Sbjct: 117 VVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVN 176
Query: 202 ---EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
M PN +++N +I LCK +D A+ VF E K C PD T+ TL+DG K
Sbjct: 177 SNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERK-CLPDGYTYCTLMDGLCKE 235
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
+ EA+ + EMQ +GC P+ V YN LI+GLC G++ +++ M LKG N T
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY 295
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
+++ G C+ G+ ++A+ ++ MVS + Y ++N K + ++AV +L M
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
Query: 379 KRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQ 438
+ + ++ + L E K EEA+ L + M GC PN + YS+++ GLC+ +G+
Sbjct: 356 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR-EGKPN 414
Query: 439 LVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
+E+++ M+ SG +A Y+ L+ G+ + G E A++ +M NK Y +
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
Query: 499 KELCAKGKVKE 509
LC G+VKE
Sbjct: 475 DGLCGVGRVKE 485
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 203/421 (48%), Gaps = 69/421 (16%)
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEP 207
L + R++ A + D++ E P Y +I G CK G + K+ D M C P
Sbjct: 232 LCKEERIDEAVLLLDEMQSEG-CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVP 290
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDG------------- 254
N +TYNT+IHGLC KG++D A+ + R SK C P+ VT+ TLI+G
Sbjct: 291 NEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK-CIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 255 ---------------YS-------KRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCL 292
YS K G+ +EA++ ++M E+GC+PN+V Y+ L++GLC
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 293 SGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKA 352
G +EAK ++++M G N T +S++KGF G EEA++ KEM G +
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFC 469
Query: 353 YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM- 411
YSV+++ C +G+ EA+ + +M+ +KP +++++ + L ++ A+ L M
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Query: 412 ----PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
P+ P+ ++Y+I++ GLC K + V +L++SML G + D N L
Sbjct: 530 CQEEPK--SQPDVVTYNILLDGLCMQKDISRAV-DLLNSMLDRGCDPDVITCNTFLNTLS 586
Query: 468 EDGD---------EEMALK------------TVYDMIDKSFLFNKDTYCTFVKELCAKGK 506
E + EE+ ++ V M+ K T+ V+E+C K
Sbjct: 587 EKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKK 646
Query: 507 V 507
+
Sbjct: 647 I 647
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 176/338 (52%), Gaps = 5/338 (1%)
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFD---EMRCEPNAITYNTMIHGLCKKGEMDGAM 229
+E D++T T MI +C+ + A V ++ EP+ IT++T+++G C +G + A+
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
+ +R E K RPD+VT +TLI+G +G V EAL + M E G QP+ VTY ++
Sbjct: 161 ALVDRMVEMKQ-RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
LC SGN A + KM + IK +V + ++ C G ++A+ EM +G+ D
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
V YS ++ C GK + +LREM+ + + P V +F+A+ V V E KL EA L
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
M G +P+ ++Y+ +I G CK + + ++ M+ G D Y+ L+ YC+
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCK-ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKV 507
+ ++ ++ K + N TY T V C GK+
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 207/437 (47%), Gaps = 11/437 (2%)
Query: 78 SCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHK--AK 135
+CY +L + S+ A L + ++ S +N F G + A+ +
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTIT---FSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 136 ASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVES 195
P ++ + ++ L RV+ A + D++V+ +PD TY ++ CK G
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGF-QPDEVTYGPVLNRLCKSGNSAL 228
Query: 196 ARKVF---DEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLI 252
A +F +E + + + Y+ +I LCK G D A+ +FN E K + DVVT+++LI
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM-EMKGIKADVVTYSSLI 287
Query: 253 DGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIK 312
G G+ + ++EM + P+VVT++ALI+ G + EAK + ++M +GI
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 313 DNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSI 372
+ T S++ GFC EA + MVS+G + D+ YS+++N YCK + + + +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 373 LREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCK 432
RE+ +K + P+ ++N + KL A L + M G P+ ++Y I++ GLC
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 433 VKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKD 492
G + E+ M +S L +YN ++ G C + A + DK +
Sbjct: 468 -NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Query: 493 TYCTFVKELCAKGKVKE 509
TY + LC KG + E
Sbjct: 527 TYNVMIGGLCKKGSLSE 543
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 200/397 (50%), Gaps = 30/397 (7%)
Query: 102 RSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCA--LSCNAVLGVLVRANRVNL 159
R+ K S S I++ G A+ F++ + G A ++ ++++G L + +
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 160 AKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMI 216
+ +++ ++ PDV T++ +I F K G + A+++++EM P+ ITYN++I
Sbjct: 299 GAKMLREMIGRNII-PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 357
Query: 217 HGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGC 276
G CK+ + A ++F+ SK C PD+VT++ LI+ Y K V + + +E+ +G
Sbjct: 358 DGFCKENCLHEANQMFDLMV-SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 277 QPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIK 336
PN +TYN L+ G C SG ++ AK + +M +G+ +V T +L G C G +A++
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 337 HMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLV 396
++M M L + Y++I++ C K +A S+ + K +KP V ++N + L
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Query: 397 AERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDA 456
+ L EA +L + M GC+P+ +Y+I+I G + V EL+ M G + D+
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSV-ELIEEMKVCGFSADS 595
Query: 457 TMYNCLLGGYCEDGDEEMALKTVYDM-----IDKSFL 488
+ +K V DM +DKSFL
Sbjct: 596 S-----------------TIKMVIDMLSDRRLDKSFL 615
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 153/322 (47%), Gaps = 9/322 (2%)
Query: 193 VESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
V A +F+ M R P I +N + + + + D + F + E D+ T T
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLG-FCKGMELNGIEHDMYTMT 109
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
+I+ Y ++ ++ A + + + G +P+ +T++ L+ G CL G V EA ++ +M
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
+ ++ T ++++ G C+ GR EA+ + MV G D Y ++N CK G + A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICG 429
+ + R+M + +K SV ++ V L + ++A+ L M G + ++YS +I G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 430 LCKVKGRMQLVEELVSSMLQSGHNL--DATMYNCLLGGYCEDGDEEMALKTVYDMIDKSF 487
LC G+ +++ M+ G N+ D ++ L+ + ++G A + +MI +
Sbjct: 290 LCN-DGKWDDGAKMLREMI--GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 488 LFNKDTYCTFVKELCAKGKVKE 509
+ TY + + C + + E
Sbjct: 347 APDTITYNSLIDGFCKENCLHE 368
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 112/247 (45%), Gaps = 1/247 (0%)
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
+V +A++ + M + P + +N L + + D M L GI+ ++ T T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
M+ +C + A + G + D +S +VN +C G+ SEAV+++ MV
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
+ +P + + + + L + ++ EA++L+ M G P+ ++Y V+ LCK G L
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK-SGNSAL 228
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
+L M + Y+ ++ C+DG + AL +M K + TY + +
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 500 ELCAKGK 506
LC GK
Sbjct: 289 GLCNDGK 295
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 177/336 (52%), Gaps = 7/336 (2%)
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRV 231
PDVF+Y T+IRGFC+ +E A ++ +EM+ C + +T+ +I CK G+MD AM
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMG- 233
Query: 232 FNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLC 291
F + + D+V +T+LI G+ GE+ E+ E+G P +TYN LI G C
Sbjct: 234 FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293
Query: 292 LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
G + EA + M +G++ NV T T ++ G C VG+++EA++ + M+ + + +
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV 353
Query: 352 AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
Y++I+N+ CK G ++AV I+ M +R +P ++N + L A+ L+EA LL M
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Query: 412 PRMG--CSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
+ P+ +SY+ +I GLCK + R+ ++ +++ D N LL +
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCK-ENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKG 505
GD A++ + D + N DTY + C G
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 207/443 (46%), Gaps = 34/443 (7%)
Query: 94 STADSLLRRSNK-----LSDFLASKFINAFGD------------RGDIRGAIHWFHKAKA 136
+ A +LRR L+ + SK +NAF + ++ A+ F +A
Sbjct: 7 AAAAEILRRDEHVVRKLLNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVD 66
Query: 137 SGPC-ALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFC------- 188
SG A + N ++ LVR+ LA + Y + ++E D F + G
Sbjct: 67 SGSSLAFAGNNLMAKLVRSRNHELAFSFYRK-----MLETDTFINFVSLSGLLECYVQMR 121
Query: 189 KMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTF 248
K G + + N +N ++ GLC+ E A+ + R S PDV ++
Sbjct: 122 KTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL-REMRRNSLMPDVFSY 180
Query: 249 TTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRL 308
T+I G+ + E+++AL EM+ GC ++VT+ LI+ C +G +DEA + +M+
Sbjct: 181 NTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKF 240
Query: 309 KGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSE 368
G++ ++ TS+++GFC G + E++ RG Y+ ++ +CK+G+ E
Sbjct: 241 MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKE 300
Query: 369 AVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVIC 428
A I M+ + ++P+V ++ + L K +EA+ LL M PN ++Y+I+I
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIIN 360
Query: 429 GLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFL 488
LCK G + E+V M + D YN LLGG C GD + A K +Y M+ S
Sbjct: 361 KLCK-DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419
Query: 489 FNKD--TYCTFVKELCAKGKVKE 509
+ D +Y + LC + ++ +
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQ 442
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 195/433 (45%), Gaps = 45/433 (10%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKA--KASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
+ I F D G++ F + + PCA++ N ++ + ++ A I++ +++
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFD---EMRCEPNAITYNTMIHGLCKKGEMD 226
V P+V+TYT +I G C +G + A ++ + E EPNA+TYN +I+ LCK G +
Sbjct: 311 RG-VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQG--CQPNVVTYN 284
A+ + + + RPD +T+ L+ G +G++ EA + M + P+V++YN
Sbjct: 370 DAVEIV-ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYN 428
Query: 285 ALIEGLCL-----------------------------------SGNVDEAKRMMSKMRLK 309
ALI GLC +G+V++A + ++
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDS 488
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
I N T T+M+ GFC G A + +M + V Y+ +++ CK G +A
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICG 429
+ EM P V SFN + + ++ A LL M R G SP+ +YS +I
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR 608
Query: 430 LCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF 489
K+ G + M+ SG DA + + +L G+ + + V ++DK +
Sbjct: 609 FLKL-GYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVL 667
Query: 490 NKDTYCTFVKELC 502
+K+ CT + +C
Sbjct: 668 DKELTCTVMDYMC 680
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 191/358 (53%), Gaps = 6/358 (1%)
Query: 153 RANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD---EMRCEPNA 209
R ++++LA A+ +++K EPD+ T ++++ G+C + A + D EM +P+
Sbjct: 130 RRSQLSLALAVLAKMMKLG-YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 210 ITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK 269
T+ T+IHGL + A+ + ++ + + C+PD+VT+ T+++G KRG++ ALN +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQ-RGCQPDLVTYGTVVNGLCKRGDIDLALNLLN 247
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG 329
+M+ + NVV +N +I+ LC +V+ A + ++M KGI+ NV T S++ C G
Sbjct: 248 KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307
Query: 330 RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFN 389
R +A + + M+ + ++ +V ++ +++ + K GK EA + EM+ + + P ++N
Sbjct: 308 RWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYN 367
Query: 390 AVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
+ +L+EA + K M C PN +Y+ +I G CK K R++ EL M Q
Sbjct: 368 LLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK-RVEDGVELFREMSQ 426
Query: 450 SGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKV 507
G + Y ++ G+ + GD + A M+ + TY + LC+ GK+
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 202/406 (49%), Gaps = 18/406 (4%)
Query: 104 NKLSDFL-ASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKA 162
N+LSD + ++ FGD R P + N +L + + N+ L +
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSR-----------PFPSIVEFNKLLSAVAKMNKFELVIS 104
Query: 163 IYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGL 219
+ +Q+ + + D++TY+ I FC+ + A V +M EP+ +T +++++G
Sbjct: 105 LGEQM-QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGY 163
Query: 220 CKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPN 279
C + A+ + ++ E +PD TFTTLI G + EA+ + +M ++GCQP+
Sbjct: 164 CHSKRISDAVALVDQMVE-MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
Query: 280 VVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMK 339
+VTY ++ GLC G++D A +++KM IK NV +++ C E A+
Sbjct: 223 LVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFT 282
Query: 340 EMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAER 399
EM ++G+ +V Y+ ++N C G+ S+A +L M+ K++ P+V +FNA+ E
Sbjct: 283 EMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEG 342
Query: 400 KLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMY 459
KL EA L + M + P+ ++Y+++I G C + R+ +++ M+ + Y
Sbjct: 343 KLVEAEKLHEEMIQRSIDPDTITYNLLINGFC-MHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 460 NCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKG 505
N L+ G+C+ E ++ +M + + N TY T ++ G
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 210/470 (44%), Gaps = 50/470 (10%)
Query: 74 SHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLS---DFLA-SKFINAFGDRGDIRGAIH 129
SH Y+ + S S A ++L + KL D + S +N + I A+
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 130 WFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGF 187
+ G P + ++ L N+ + A A+ DQ+V+ +PD+ TY T++ G
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGL 233
Query: 188 CKMG-----------------------------------MVESARKVFDEMRCE---PNA 209
CK G VE A +F EM + PN
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 210 ITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK 269
+TYN++I+ LC G A R+ + E K P+VVTF LID + K G++ EA +
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKK-INPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG 329
EM ++ P+ +TYN LI G C+ +DEAK+M M K N+ T +++ GFC
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 330 RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFN 389
R E+ ++ +EM RG+ + Y+ I+ + + G A + ++MV+ R+ + +++
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYS 472
Query: 390 AVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
+ L + KL+ A+++ K + + N Y+ +I G+CK G++ +L S+
Sbjct: 473 ILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA-GKVGEAWDLFCSL-- 529
Query: 450 SGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
D YN ++ G C + A M + L N TY T ++
Sbjct: 530 -SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 165/338 (48%), Gaps = 5/338 (1%)
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDEMRC---EPNAITYNTMIHGLCKKGEMDGAMRV 231
P + + ++ KM E + ++M+ + TY+ I+ C++ ++ A+ V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 232 FNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLC 291
+ + PD+VT ++L++GY + +A+ + +M E G +P+ T+ LI GL
Sbjct: 141 LAKMMK-LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 292 LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
L EA ++ +M +G + ++ T +++ G C G + A+ + +M + + +V
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV 259
Query: 352 AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
++ I++ CK AV + EM K ++P+V ++N++ L + +A LL NM
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 412 PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGD 471
+PN ++++ +I K +G++ E+L M+Q + D YN L+ G+C
Sbjct: 320 LEKKINPNVVTFNALIDAFFK-EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 472 EEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ A + M+ K L N TY T + C +V++
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 201/443 (45%), Gaps = 62/443 (13%)
Query: 41 SLVTQVIKNTHNPH--------HALFFFNWASNP------------QPNPNNYSHPRSCY 80
+LV Q+++ + P H LF N AS QP+ Y +
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 81 AAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG-- 138
D+ L+ +L + ++ ++N + + + I++ + A+ F + + G
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVV---IFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ N+++ L R + A + ++ E + P+V T+ +I F K G + A K
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNML-EKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 199 VFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+ +EM +P+ ITYN +I+G C +D A ++F +F SK C P++ T+ TLI+G+
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF-KFMVSKDCLPNIQTYNTLINGF 408
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K V++ + +EM ++G N VTY +I+G +G+ D A+ + +M + ++
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDI 468
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA------ 369
T + +L G C G+ + A+ K + M+L++ Y+ ++ CK GK EA
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS 528
Query: 370 VSILREMVA---------------------KRMK-----PSVSSFNAVFRVLVAERKLEE 403
+SI ++V ++MK P+ ++N + R + +
Sbjct: 529 LSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAA 588
Query: 404 AVLLLKNMPRMGCSPNFLSYSIV 426
+ L+K M G + + S+V
Sbjct: 589 SAELIKEMRSSGFVGDASTISLV 611
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 155/327 (47%), Gaps = 18/327 (5%)
Query: 80 YAAITDVLLSHSLFSTADSLLRRSNKLSDFLA------SKFINAFGDRGDIRGA--IHWF 131
Y ++ + L ++ +S A LL SN L + + I+AF G + A +H
Sbjct: 296 YNSLINCLCNYGRWSDASRLL--SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 132 HKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMG 191
++ P ++ N ++ NR++ AK ++ +V + + P++ TY T+I GFCK
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL-PNIQTYNTLINGFCKCK 412
Query: 192 MVESARKVFDEMRCEP---NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTF 248
VE ++F EM N +TY T+I G + G+ D A VF + S D++T+
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV-SNRVPTDIMTY 471
Query: 249 TTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRL 308
+ L+ G G++ AL K +Q+ + N+ YN +IEG+C +G V EA + +
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL-- 529
Query: 309 KGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSE 368
IK +V T +M+ G C +EA ++M G + Y+ ++ + +
Sbjct: 530 -SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAA 588
Query: 369 AVSILREMVAKRMKPSVSSFNAVFRVL 395
+ +++EM + S+ + V +L
Sbjct: 589 SAELIKEMRSSGFVGDASTISLVTNML 615
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 11/230 (4%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASGPCA--LSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
IN F + + F + G ++ ++ +A + A+ ++ Q+V
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGA 228
V D+ TY+ ++ G C G +++A +F ++ E N YNTMI G+CK G++ A
Sbjct: 464 -VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA 522
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
+F S S +PDVVT+ T+I G + +QEA + ++M+E G PN TYN LI
Sbjct: 523 WDLFC----SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHM 338
+ + ++ +MR G + +T S++ GR +++ +M
Sbjct: 579 ANLRDCDRAASAELIKEMRSSGFVGDAST-ISLVTNMLHDGRLDKSFLNM 627
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Query: 355 VIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRM 414
++ N I K +AV + +MV R PS+ FN + + K E + L + M +
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 415 GCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEM 474
G S + +YSI I C+ + ++ L +++ M++ G+ D + LL GYC
Sbjct: 113 GISHDLYTYSIFINCFCR-RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 475 ALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
A+ V M++ + + T+ T + L K E
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 185/359 (51%), Gaps = 6/359 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ ++L + NR A ++ D + V P+V Y T+I G CK + +A +
Sbjct: 147 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV-PNVVIYNTVINGLCKNRDLNNALE 205
Query: 199 VF---DEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
VF ++ +A+TYNT+I GL G A R+ + K P+V+ FT LID +
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK-IDPNVIFFTALIDTF 264
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G + EA N KEM + PNV TYN+LI G C+ G + +AK M M KG +V
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T +++ GFC R E+ +K EM +G+ D Y+ +++ YC+ GK + A +
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
MV + P + ++N + L K+E+A+++++++ + + ++Y+I+I GLC+
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD- 443
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTY 494
+++ L S+ + G DA Y ++ G C G + A K M + F+ ++ Y
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 184/376 (48%), Gaps = 6/376 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + VL V+ + N+ ++ +Y ++ + + D++++T +I FC+ + A
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKM-ENLGISHDLYSFTILIHCFCRCSRLSLALA 135
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+ +M P+ +T ++++G C+ A+ + + + P+VV + T+I+G
Sbjct: 136 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM-DGFGFVPNVVIYNTVINGL 194
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K ++ AL M+++G + + VTYN LI GL SG +A R++ M + I NV
Sbjct: 195 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 254
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T+++ F G EA KEM+ R + +V Y+ ++N +C G +A +
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
MV+K P V ++N + +++E+ + L M G + +Y+ +I G C+ G
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA-G 373
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYC 495
++ + +++ + M+ G + D YN LL C +G E AL V D+ + TY
Sbjct: 374 KLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYN 433
Query: 496 TFVKELCAKGKVKEEY 511
++ LC K+KE +
Sbjct: 434 IIIQGLCRTDKLKEAW 449
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 134/258 (51%), Gaps = 5/258 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + A++ V+ + A+ +Y ++++ ++V P+VFTY ++I GFC G + A+
Sbjct: 252 PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV-PNVFTYNSLINGFCIHGCLGDAKY 310
Query: 199 VFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+FD M C P+ +TYNT+I G CK ++ M++F + D T+ TLI GY
Sbjct: 311 MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT-YQGLVGDAFTYNTLIHGY 369
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+ G++ A M + G P++VTYN L++ LC +G +++A M+ ++ + ++
Sbjct: 370 CQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDI 429
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T +++G C + +EA + + +G+ D AY +++ C+ G EA + R
Sbjct: 430 ITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRR 489
Query: 376 MVAKRMKPSVSSFNAVFR 393
M PS ++ R
Sbjct: 490 MKEDGFMPSERIYDETLR 507
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 111/257 (43%), Gaps = 10/257 (3%)
Query: 258 RGEVQEALNCMK---------EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRL 308
R ++ L+C+K EM + P++V + ++ + D + KM
Sbjct: 48 RERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMEN 107
Query: 309 KGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSE 368
GI ++ + T ++ FC R A+ + +M+ G + ++N +C+ + E
Sbjct: 108 LGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQE 167
Query: 369 AVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVIC 428
AVS++ M P+V +N V L R L A+ + M + G + ++Y+ +I
Sbjct: 168 AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 227
Query: 429 GLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFL 488
GL GR L+ M++ + + + L+ + ++G+ A +MI +S +
Sbjct: 228 GLSN-SGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 489 FNKDTYCTFVKELCAKG 505
N TY + + C G
Sbjct: 287 PNVFTYNSLINGFCIHG 303
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Query: 109 FLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQ 166
F + I+ + G + A F++ G P ++ N +L L ++ A + +
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 167 VVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKG 223
+ K + + D+ TY +I+G C+ ++ A +F + +P+AI Y TMI GLC+KG
Sbjct: 420 LQKSEM-DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Query: 224 EMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYS 256
A ++ R E + + TL D Y+
Sbjct: 479 LQREADKLCRRMKEDGFMPSERIYDETLRDHYT 511
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 186/349 (53%), Gaps = 10/349 (2%)
Query: 174 EPDVFTYTTMIRGFCKMGMVESARKVFD---EMRCEPNAITYNTMIHGLCKKGEMDGAMR 230
EPD+ T +++ GFC + A + D EM +P+ +T+ T+IHGL + A+
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 231 VFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGL 290
+ +R + + C+PD+VT+ +++G KRG+ ALN + +M+ + NVV Y+ +I+ L
Sbjct: 205 LIDRMVQ-RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 291 CLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDV 350
C + D+A + ++M KG++ NV T +S++ C GR +A + + +M+ R ++ ++
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 351 KAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKN 410
+S +++ + K GK +A + EM+ + + P++ +++++ +L EA +L+
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 411 MPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDG 470
M R C PN ++Y+ +I G CK K R+ EL M Q G + Y L+ G+ +
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAK-RVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 471 DEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE-----EYLKR 514
D + A M+ N TY + LC GK+ + EYL+R
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 491
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 184/374 (49%), Gaps = 39/374 (10%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ N++L NR++ A A+ DQ+V E +PD T+TT+I G A
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQMV-EMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 199 VFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFA------------------- 236
+ D M C+P+ +TY +++GLCK+G+ D A+ + N+
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 237 ---------------ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVV 281
E+K RP+V+T+++LI G +A + +M E+ PN+V
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 282 TYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEM 341
T++ALI+ G + +A+++ +M + I N+ T +S++ GFCM+ R EA + ++ M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 342 VSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKL 401
+ + +V Y+ ++N +CK + + + + REM + + + ++ + R
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 402 EEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNC 461
+ A ++ K M +G PN L+Y+I++ GLCK G++ + + +S D YN
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCK-NGKLAKAMVVFEYLQRSTMEPDIYTYNI 503
Query: 462 LLGGYCEDGDEEMA 475
++ G C+ G +M
Sbjct: 504 MIEGMCKAGKWKMG 517
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 193/364 (53%), Gaps = 8/364 (2%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL-VEPDVFTYTTMIRGFCKMGMVESAR 197
P + + +L + + N+ +L + +++ E L + +++TY +I FC+ + A
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKM--EILGISHNLYTYNILINCFCRCSRLSLAL 133
Query: 198 KVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDG 254
+ +M EP+ +T N++++G C + A+ + ++ E +PD VTFTTLI G
Sbjct: 134 ALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE-MGYKPDTVTFTTLIHG 192
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
+ EA+ + M ++GCQP++VTY A++ GLC G+ D A +++KM I+ N
Sbjct: 193 LFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEAN 252
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
V ++++ C ++A+ EM ++G+ +V YS +++ C G+ S+A +L
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
+M+ +++ P++ +F+A+ V + KL +A L + M + PN +YS +I G C +
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Query: 435 GRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTY 494
R+ ++++ M++ + YN L+ G+C+ + ++ +M + + N TY
Sbjct: 373 -RLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTY 431
Query: 495 CTFV 498
T +
Sbjct: 432 TTLI 435
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 150/311 (48%), Gaps = 2/311 (0%)
Query: 199 VFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
V + R P+ I ++ ++ + K + D + F E ++ T+ LI+ + +
Sbjct: 68 VMAQSRPFPSIIEFSKLLSAIAKMNKFDLVIS-FGEKMEILGISHNLYTYNILINCFCRC 126
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
+ AL + +M + G +P++VT N+L+ G C + +A ++ +M G K + T
Sbjct: 127 SRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTF 186
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
T+++ G + ++ EA+ + MV RG D+ Y +VN CK G A+++L +M A
Sbjct: 187 TTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA 246
Query: 379 KRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQ 438
+++ +V ++ V L R ++A+ L M G PN ++YS +I LC GR
Sbjct: 247 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY-GRWS 305
Query: 439 LVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
L+S M++ N + ++ L+ + + G A K +MI +S N TY + +
Sbjct: 306 DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 499 KELCAKGKVKE 509
C ++ E
Sbjct: 366 NGFCMLDRLGE 376
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
E+ +A+ M + P+++ ++ L+ + D KM + GI N+ T
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
++ FC R A+ + +M+ G + D+ + ++N +C + S+AV+++ +MV
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
KP +F + L K EAV L+ M + GC P+ ++Y V+ GLCK +G L
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCK-RGDTDL 236
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
L++ M + + +Y+ ++ C+ E+ AL +M +K N TY + +
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296
Query: 500 ELCAKGK 506
LC G+
Sbjct: 297 CLCNYGR 303
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 199/406 (49%), Gaps = 12/406 (2%)
Query: 109 FLASKFINAFGDRGDIRGAIHWFHKAKASGP--CALSCNAVLGVLVRANRVNLAKAIYDQ 166
F S + + A+ + A SG A +C+ +L L + ++ A+ I +
Sbjct: 320 FTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGR 379
Query: 167 VVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKG 223
+ + LV P+ Y TMI G+C+ G + AR + M +P+ + YN +I C+ G
Sbjct: 380 EMAKGLV-PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 224 EMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTY 283
EM+ A + N+ + K P V T+ LI GY ++ E + + +KEM++ G PNVV+Y
Sbjct: 439 EMENAEKEVNKM-KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Query: 284 NALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVS 343
LI LC + EA+ + M +G+ V ++ G C G+ E+A + KEM+
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557
Query: 344 RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEE 403
+G++L++ Y+ +++ GK SEA +L E+ K +KP V ++N++ ++
Sbjct: 558 KGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQR 617
Query: 404 AVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLL 463
+ L + M R G P +Y ++I LC +G ++L E L M D +YN +L
Sbjct: 618 CIALYEEMKRSGIKPTLKTYHLLI-SLCTKEG-IELTERLFGEM---SLKPDLLVYNGVL 672
Query: 464 GGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
Y GD E A MI+KS +K TY + + GK+ E
Sbjct: 673 HCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCE 718
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 201/414 (48%), Gaps = 15/414 (3%)
Query: 107 SDFLASKF-----INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNL 159
SDF SKF I A D+ + F++ K P N ++ L + R+N
Sbjct: 173 SDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMND 232
Query: 160 AKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRC---EPNAITYNTMI 216
A+ ++D+++ L+ P + TY T+I G+CK G E + KV + M+ EP+ IT+NT++
Sbjct: 233 AEQLFDEMLARRLL-PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLL 291
Query: 217 HGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGC 276
GL K G ++ A V + PD TF+ L DGYS + + AL + + G
Sbjct: 292 KGLFKAGMVEDAENVLKEMKDLGFV-PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGV 350
Query: 277 QPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIK 336
+ N T + L+ LC G +++A+ ++ + KG+ N +M+ G+C G A
Sbjct: 351 KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARM 410
Query: 337 HMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLV 396
++ M +GM D AY+ ++ +C++G+ A + +M K + PSV ++N +
Sbjct: 411 KIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYG 470
Query: 397 AERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVS-SMLQSGHNLD 455
+ + ++ +LK M G PN +SY +I LC KG L ++V M G +
Sbjct: 471 RKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLC--KGSKLLEAQIVKRDMEDRGVSPK 528
Query: 456 ATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+YN L+ G C G E A + +M+ K N TY T + L GK+ E
Sbjct: 529 VRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSE 582
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 190/422 (45%), Gaps = 39/422 (9%)
Query: 105 KLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKA 162
K++ + S +NA G I A + A G P + N ++ R + A+
Sbjct: 351 KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARM 410
Query: 163 IYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGL 219
+ + K+ + +PD Y +IR FC++G +E+A K ++M+ + P+ TYN +I G
Sbjct: 411 KIEAMEKQGM-KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469
Query: 220 CKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPN 279
+K E D + E P+VV++ TLI+ K ++ EA ++M+++G P
Sbjct: 470 GRKYEFDKCFDILKEM-EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPK 528
Query: 280 VVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMK 339
V YN LI+G C G +++A R +M KGI+ N+ T +++ G M G+ EA +
Sbjct: 529 VRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLL 588
Query: 340 EMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSF----------- 388
E+ +G+ DV Y+ +++ Y G +++ EM +KP++ ++
Sbjct: 589 EISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Query: 389 --------------------NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVIC 428
N V +E+A L K M + +Y+ +I
Sbjct: 649 IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLIL 708
Query: 429 GLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFL 488
G KV G++ V L+ M +A YN ++ G+CE D A +M +K FL
Sbjct: 709 GQLKV-GKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFL 767
Query: 489 FN 490
+
Sbjct: 768 LD 769
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 147/334 (44%), Gaps = 38/334 (11%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
I +G + + + + +G P +S ++ L + +++ L I + +++
Sbjct: 465 LIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL-LEAQIVKRDMEDR 523
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGA 228
V P V Y +I G C G +E A + EM E N +TYNT+I GL G++ A
Sbjct: 524 GVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEA 583
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI- 287
+ + K +PDV T+ +LI GY G VQ + +EM+ G +P + TY+ LI
Sbjct: 584 EDLLLEISR-KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Query: 288 ----EGLCLS--------------------------GNVDEAKRMMSKMRLKGIKDNVAT 317
EG+ L+ G++++A + +M K I + T
Sbjct: 643 LCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTT 702
Query: 318 NTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMV 377
S++ G VG+ E + EM +R M+ + Y++IV +C++ A REM
Sbjct: 703 YNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQ 762
Query: 378 AKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
K V N + L E + +EA +++ M
Sbjct: 763 EKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 159/384 (41%), Gaps = 64/384 (16%)
Query: 148 LGVLVRANRVNLAKAIYDQVVKE---------------ALVEPDV---FTYTTMIRGFCK 189
L VL++ NR+ A+ + +++ +L P + F+Y + +
Sbjct: 62 LRVLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNE 121
Query: 190 MGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVV 246
M+ A +F +R E P++ + ++ L K + + VF ES RP
Sbjct: 122 SKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES-DFRPSKF 180
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
+ I K +V + L M+ P+V YN LI+GLC +++A+++
Sbjct: 181 MYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD-- 238
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP 366
EM++R + + Y+ +++ YCK G P
Sbjct: 239 ---------------------------------EMLARRLLPSLITYNTLIDGYCKAGNP 265
Query: 367 SEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
++ + M A ++PS+ +FN + + L +E+A +LK M +G P+ ++SI+
Sbjct: 266 EKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSIL 325
Query: 427 ICGLC---KVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMI 483
G K + + + E V SG ++A + LL C++G E A + + +
Sbjct: 326 FDGYSSNEKAEAALGVYETAV----DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381
Query: 484 DKSFLFNKDTYCTFVKELCAKGKV 507
K + N+ Y T + C KG +
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDL 405
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 5/254 (1%)
Query: 93 FSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGV 150
F + +L++ +L+ + I+ G + A + G P + N+++
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISG 608
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAI 210
A V A+Y+++ K + ++P + TY +I C +E ++F EM +P+ +
Sbjct: 609 YGFAGNVQRCIALYEEM-KRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMSLKPDLL 666
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKE 270
YN ++H G+M+ A + + E KS D T+ +LI G K G++ E + + E
Sbjct: 667 VYNGVLHCYAVHGDMEKAFNLQKQMIE-KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE 725
Query: 271 MQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGR 330
M + +P TYN +++G C + A +M+ KG +V ++ G R
Sbjct: 726 MNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWR 785
Query: 331 SEEAIKHMKEMVSR 344
S+EA + EM R
Sbjct: 786 SKEAEIVISEMNGR 799
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 13/242 (5%)
Query: 80 YAAITDVLLSHSLFSTADSLL----RRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAK 135
Y + D L S A+ LL R+ K F + I+ +G G+++ I + + K
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 136 ASG-PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVE 194
SG L +L L + L + ++ ++ ++PD+ Y ++ + G +E
Sbjct: 627 RSGIKPTLKTYHLLISLCTKEGIELTERLFGEMS----LKPDLLVYNGVLHCYAVHGDME 682
Query: 195 SA---RKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTL 251
A +K E + TYN++I G K G++ + + ++ P+ T+ +
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM-NAREMEPEADTYNII 741
Query: 252 IDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
+ G+ + + A +EMQE+G +V N L+ GL EA+ ++S+M + +
Sbjct: 742 VKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRML 801
Query: 312 KD 313
D
Sbjct: 802 GD 803
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 214/466 (45%), Gaps = 29/466 (6%)
Query: 72 NYSHPRSCYAAITDVLLSHSLFSTADS----LLRRSN----KLSDFLASKF--------- 114
N+ H +A+ +L+ S A S ++RRS ++ + L S F
Sbjct: 108 NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV 167
Query: 115 ----INAFGDRGDIRGAIHWFHKAKASGPCAL--SCNAVLGVLVRANRVNLAKAIYDQVV 168
I + +R A F ++ G +CNA++G LVR V LA +Y ++
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 169 KEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEM 225
+ V +V+T M+ CK G +E +++ P+ +TYNT+I KG M
Sbjct: 228 RSG-VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 226 DGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNA 285
+ A + N K P V T+ T+I+G K G+ + A EM G P+ TY +
Sbjct: 287 EEAFELMNAMP-GKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 286 LIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG 345
L+ C G+V E +++ S MR + + ++ +SM+ F G ++A+ + + G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 346 MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAV 405
+ D Y++++ YC+ G S A+++ EM+ + V ++N + L + L EA
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 406 LLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGG 465
L M P+ + +I+I G CK+ G +Q EL M + LD YN LL G
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKL-GNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 466 YCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
+ + GD + A + DM+ K L +Y V LC+KG + E +
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAF 570
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 196/403 (48%), Gaps = 10/403 (2%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
I+A+ +G + A + G P + N V+ L + + AK ++ ++++
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGA 228
L PD TY +++ CK G V KVF +MR P+ + +++M+ + G +D A
Sbjct: 336 L-SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
+ FN E+ PD V +T LI GY ++G + A+N EM +QGC +VVTYN ++
Sbjct: 395 LMYFNSVKEA-GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
GLC + EA ++ ++M + + + T T ++ G C +G + A++ ++M + + L
Sbjct: 454 GLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL 513
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
DV Y+ +++ + K+G A I +MV+K + P+ S++ + L ++ L EA +
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 409 KNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCE 468
M P + + +I G C+ G E + M+ G D YN L+ G+
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCR-SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Query: 469 DGDEEMALKTVYDMIDKSFLFNKD--TYCTFVKELCAKGKVKE 509
+ + A V M ++ D TY + + C + ++KE
Sbjct: 633 EENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 182/380 (47%), Gaps = 53/380 (13%)
Query: 85 DVLLSHSLFSTADSLLRRSNKLSDFLA-SKFINAFGDRGDIRGAIHWFHKAKASGPCALS 143
DV+ + +FS +R + + D + S ++ F G++ A+ +F+ K +G +
Sbjct: 355 DVVETEKVFSD----MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG--LIP 408
Query: 144 CNAVLGVLV----RANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKV 199
N + +L+ R +++A + ++++++ DV TY T++ G CK M+ A K+
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA-MDVVTYNTILHGLCKRKMLGEADKL 467
Query: 200 FDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYS 256
F+EM P++ T +I G CK G + AM +F + E K R DVVT+ TL+DG+
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE-KRIRLDVVTYNTLLDGFG 526
Query: 257 KRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVA 316
K G++ A +M + P ++Y+ L+ LC G++ EA R+ +M K IK V
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 317 TNTSMLKGFCMVGRSEEAIKHMKEMVSRG------------------------------- 345
SM+KG+C G + + +++M+S G
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Query: 346 ------MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAER 399
+ DV Y+ I++ +C+ + EA +LR+M+ + + P S++ + V++
Sbjct: 647 EEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQD 706
Query: 400 KLEEAVLLLKNMPRMGCSPN 419
L EA + M + G SP+
Sbjct: 707 NLTEAFRIHDEMLQRGFSPD 726
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 131/284 (46%), Gaps = 15/284 (5%)
Query: 80 YAAITDVLLSHSLFSTADSLLRRSNKLSDFLASK----FINAFGDRGDIRGAIHWFHKAK 135
Y I L + AD L + + F S I+ G+++ A+ F K K
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 136 ASGP--CALSCNAVLGVLVRANRVNLAKAIY-DQVVKEALVEPDVFTYTTMIRGFCKMGM 192
++ N +L + ++ AK I+ D V KE L P +Y+ ++ C G
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP--ISYSILVNALCSKGH 565
Query: 193 VESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
+ A +V+DEM +P + N+MI G C+ G + S+ PD +++
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI-SEGFVPDCISYN 624
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQ--GCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR 307
TLI G+ + + +A +K+M+E+ G P+V TYN+++ G C + EA+ ++ KM
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 308 LKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
+G+ + +T T M+ GF EA + EM+ RG D K
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 177/335 (52%), Gaps = 6/335 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ ++L R +RV A ++DQ+V +P+V Y T+I G CK V++A
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG-YKPNVVIYNTIIDGLCKSKQVDNALD 207
Query: 199 VFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+ + M + P+ +TYN++I GLC G A R+ + + + PDV TF LID
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK-REIYPDVFTFNALIDAC 266
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G V EA +EM + P++VTY+ LI GLC+ +DEA+ M M KG +V
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T + ++ G+C + E +K EM RG+ + Y++++ YC+ GK + A I R
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
MV + P++ ++N + L K+E+A+++L +M + G + ++Y+I+I G+CK G
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA-G 445
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDG 470
+ ++ S+ G D Y ++ G + G
Sbjct: 446 EVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 191/370 (51%), Gaps = 6/370 (1%)
Query: 143 SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDE 202
+CN +L R ++++LA + +++K EP + T+ +++ GFC+ V A +FD+
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176
Query: 203 ---MRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRG 259
M +PN + YNT+I GLCK ++D A+ + NR E PDVVT+ +LI G G
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM-EKDGIGPDVVTYNSLISGLCSSG 235
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
+A + M ++ P+V T+NALI+ G V EA+ +M + + ++ T +
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
++ G CM R +EA + MVS+G DV YS+++N YCK K + + EM +
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
+ + ++ + + KL A + + M G PN ++Y++++ GLC G+++
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD-NGKIEK 414
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
+++ M ++G + D YN ++ G C+ G+ A + + + + TY T +
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474
Query: 500 ELCAKGKVKE 509
L KG +E
Sbjct: 475 GLYKKGLRRE 484
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 167/313 (53%), Gaps = 2/313 (0%)
Query: 206 EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL 265
EP+ +T+ ++++G C+ + A+ +F++ +P+VV + T+IDG K +V AL
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMV-GMGYKPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 266 NCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGF 325
+ + M++ G P+VVTYN+LI GLC SG +A RM+S M + I +V T +++
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 326 CMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSV 385
GR EA + +EM+ R +D D+ YS+++ C + EA + MV+K P V
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 386 SSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVS 445
+++ + +K+E + L M + G N ++Y+I+I G C+ G++ + EE+
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA-GKLNVAEEIFR 385
Query: 446 SMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKG 505
M+ G + + YN LL G C++G E AL + DM + TY ++ +C G
Sbjct: 386 RMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445
Query: 506 KVKEEYLKRCVDN 518
+V + + C N
Sbjct: 446 EVADAWDIYCSLN 458
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 150/285 (52%), Gaps = 5/285 (1%)
Query: 138 GPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESAR 197
GP ++ N+++ L + R + A + + K + PDVFT+ +I K G V A
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE-IYPDVFTFNALIDACVKEGRVSEAE 276
Query: 198 KVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDG 254
+ ++EM +P+ +TY+ +I+GLC +D A +F F SK C PDVVT++ LI+G
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG-FMVSKGCFPDVVTYSILING 335
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
Y K +V+ + EM ++G N VTY LI+G C +G ++ A+ + +M G+ N
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
+ T +L G C G+ E+A+ + +M GMD D+ Y++I+ CK G+ ++A I
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYC 455
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPN 419
+ + + P + ++ + L + EA L + M G PN
Sbjct: 456 SLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 166/342 (48%), Gaps = 7/342 (2%)
Query: 180 YTTMIR-GFCKMGMVESARKVFDEMRCEP--NAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
Y M+R G M + +S F ++C P + ++ ++ + K + D + ++ +
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM- 107
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNV 296
+ ++ T L++ + + ++ AL+ + +M + G +P++VT+ +L+ G C V
Sbjct: 108 QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRV 167
Query: 297 DEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVI 356
+A M +M G K NV +++ G C + + A+ + M G+ DV Y+ +
Sbjct: 168 YDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 357 VNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGC 416
++ C G+ S+A ++ M + + P V +FNA+ V E ++ EA + M R
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 417 SPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMAL 476
P+ ++YS++I GLC + R+ EE+ M+ G D Y+ L+ GYC+ E +
Sbjct: 288 DPDIVTYSLLIYGLC-MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 477 KTVYDMIDKSFLFNKDTYCTFVKELCAKGK--VKEEYLKRCV 516
K +M + + N TY ++ C GK V EE +R V
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 200/378 (52%), Gaps = 11/378 (2%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD--- 201
N ++ R ++++LA A+ +++K EP + T ++++ G+C + A + D
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 202 EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
EM P+ IT+ T+IHGL + A+ + +R + + C+P++VT+ +++G KRG++
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDI 241
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
A N + +M+ + NVV Y+ +I+ LC + D+A + ++M KG++ NV T +S+
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
+ C R +A + + +M+ R ++ +V ++ +++ + K GK EA + EM+ + +
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 382 KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVE 441
P + +++++ +L+EA + + M C PN ++Y+ +I G CK K R+
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK-RIDEGV 420
Query: 442 ELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKEL 501
EL M Q G + Y L+ G+ + D + A M+ N TY T + L
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Query: 502 CAKGKVKE-----EYLKR 514
C GK+++ EYL+R
Sbjct: 481 CKNGKLEKAMVVFEYLQR 498
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 179/340 (52%), Gaps = 6/340 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ V+ L + ++LA + +++ + A +E +V Y+T+I CK + A
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALN 281
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+F EM PN ITY+++I LC A R+ + E K P+VVTF LID +
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK-INPNVVTFNALIDAF 340
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G++ EA EM ++ P++ TY++LI G C+ +DEAK M M K NV
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T +++ GFC R +E ++ +EM RG+ + Y+ +++ + + A + ++
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
MV+ + P++ ++N + L KLE+A+++ + + R P +Y+I+I G+CK G
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA-G 519
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMA 475
+++ +L S+ G D +YN ++ G+C G +E A
Sbjct: 520 KVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA 559
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 198/405 (48%), Gaps = 18/405 (4%)
Query: 109 FLASKFINAFGD-RGDIRGAIHWFHKAKASG-----------PCALSCNAVLGVLVRANR 156
+ F + GD R +R +H A G P N +L + + +
Sbjct: 41 YWGRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKK 100
Query: 157 VNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYN 213
+L ++ +++ + + +++TY +I FC+ + A + +M EP+ +T +
Sbjct: 101 FDLVISLGEKMQRLG-ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLS 159
Query: 214 TMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQE 273
++++G C + A+ + ++ E RPD +TFTTLI G + EA+ + M +
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVE-MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 274 QGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEE 333
+GCQPN+VTY ++ GLC G++D A +++KM I+ NV ++++ C ++
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278
Query: 334 AIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFR 393
A+ EM ++G+ +V YS +++ C + S+A +L +M+ +++ P+V +FNA+
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 394 VLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHN 453
V E KL EA L M + P+ +YS +I G C + R+ + + M+
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC-MHDRLDEAKHMFELMISKDCF 397
Query: 454 LDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
+ YN L+ G+C+ + ++ +M + + N TY T +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 186/404 (46%), Gaps = 30/404 (7%)
Query: 41 SLVTQVIKNTHNPH--------HALFFFNWASNP------------QPNPNNYSHPRSCY 80
+LV Q+++ + P H LF N AS QPN Y +
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 81 AAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG-- 138
D+ L+ +L + ++ +N + + S I++ A++ F + + G
Sbjct: 236 CKRGDIDLAFNLLNKMEAAKIEANVV---IYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ ++++ L R + A + ++ E + P+V T+ +I F K G + A K
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMI-ERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 199 VFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
++DEM +P+ TY+++I+G C +D A +F SK C P+VVT+ TLI+G+
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTLINGF 410
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K + E + +EM ++G N VTY LI G + + D A+ + +M G+ N+
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T ++L G C G+ E+A+ + + M+ + Y++++ CK GK + +
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS 530
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPN 419
+ K +KP V +N + + EEA L + M G P+
Sbjct: 531 LSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 156/319 (48%), Gaps = 10/319 (3%)
Query: 191 GMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTT 250
GMV+S R P+ +N ++ + K + D + + + + ++ T+
Sbjct: 75 GMVKS--------RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYNI 125
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG 310
LI+ + +R ++ AL + +M + G +P++VT ++L+ G C + +A ++ +M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 311 IKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAV 370
+ + T T+++ G + ++ EA+ + MV RG ++ Y V+VN CK G A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 371 SILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGL 430
++L +M A +++ +V ++ V L R ++A+ L M G PN ++YS +I L
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 431 CKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFN 490
C + R L+S M++ N + +N L+ + ++G A K +MI +S +
Sbjct: 306 CNYE-RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 491 KDTYCTFVKELCAKGKVKE 509
TY + + C ++ E
Sbjct: 365 IFTYSSLINGFCMHDRLDE 383
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 116/243 (47%), Gaps = 1/243 (0%)
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
++ +A+ M + P++ +N L+ + D + KM+ GI N+ T
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
++ FC + A+ + +M+ G + + S ++N YC + S+AV+++ +MV
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
+P +F + L K EAV L+ M + GC PN ++Y +V+ GLCK +G + L
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK-RGDIDL 243
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
L++ M + + +Y+ ++ C+ E+ AL +M +K N TY + +
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 500 ELC 502
LC
Sbjct: 304 CLC 306
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 144/550 (26%), Positives = 247/550 (44%), Gaps = 86/550 (15%)
Query: 38 LTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAA--ITDVLLS---HSL 92
+ SLV ++KNT+NP A F + +P+ SH S A I +L+ H
Sbjct: 1 MEQSLVKALLKNTNNPRLAWRIFKRIFS---SPSEESHGISLDATPTIARILVRAKMHEE 57
Query: 93 FSTADSLLRRSN----KLSDFLASKFINAFGDRGDIRGAIHWFHKAKA----SGPCALSC 144
+L+ S+ KLS L+ ++ F I A F ++ + P
Sbjct: 58 IQELHNLILSSSIQKTKLSSLLS--VVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLY 115
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM- 203
N +L ++ RV +Y +V + P +T+ +IR C V++AR++FDEM
Sbjct: 116 NLLLESCIKERRVEFVSWLYKDMVLCG-IAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 204 --RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
C+PN T+ ++ G CK G D + + N ES P+ V + T++ + + G
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM-ESFGVLPNKVIYNTIVSSFCREGRN 233
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK---GI-KDNVAT 317
++ +++M+E+G P++VT+N+ I LC G V +A R+ S M L G+ + N T
Sbjct: 234 DDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSIT 293
Query: 318 NTSMLKGFCMVGRSEEA--------------------------IKH---------MKEMV 342
MLKGFC VG E+A ++H +K+M
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLE 402
+G+ + +Y+++++ CK+G S+A +I+ M + P ++ + + K++
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVD 413
Query: 403 EAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCL 462
A LL+ M R C PN + +I++ L K+ GR+ EEL+ M + G+ LD N +
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKM-GRISEAEELLRKMNEKGYGLDTVTCNII 472
Query: 463 LGGYCEDGDEEMALKTVYDM------------------IDKSFLFNK-----DTYCTFVK 499
+ G C G+ + A++ V M +D S + N TY T +
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532
Query: 500 ELCAKGKVKE 509
LC G+ E
Sbjct: 533 GLCKAGRFAE 542
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 212/490 (43%), Gaps = 73/490 (14%)
Query: 79 CYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG 138
C A +TD L L + +S NK+ + + +++F G + K + G
Sbjct: 193 CKAGLTDKGLE--LLNAMESFGVLPNKV---IYNTIVSSFCREGRNDDSEKMVEKMREEG 247
Query: 139 --PCALSCNAVLGVLVRANRVNLAKAIY-DQVVKE--ALVEPDVFTYTTMIRGFCKMGMV 193
P ++ N+ + L + +V A I+ D + E L P+ TY M++GFCK+G++
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLL 307
Query: 194 ESARKVFDEMR--------------------------------------CEPNAITYNTM 215
E A+ +F+ +R P+ +YN +
Sbjct: 308 EDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNIL 367
Query: 216 IHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQG 275
+ GLCK G + A + + C PD VT+ L+ GY G+V A + ++EM
Sbjct: 368 MDGLCKLGMLSDAKTIVGLMKRNGVC-PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 276 CQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAI 335
C PN T N L+ L G + EA+ ++ KM KG + T ++ G C G ++AI
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Query: 336 KHMKEMVSRGMDL-----------------------DVKAYSVIVNEYCKIGKPSEAVSI 372
+ +K M G D+ YS ++N CK G+ +EA ++
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546
Query: 373 LREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCK 432
EM+ ++++P ++N + K+ A +LK+M + GC + +Y+ +I GL
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL-G 605
Query: 433 VKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKD 492
+K ++ + L+ M + G + + YN + CE E A + +M+ K+ N
Sbjct: 606 IKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVF 665
Query: 493 TYCTFVKELC 502
++ ++ C
Sbjct: 666 SFKYLIEAFC 675
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 185/442 (41%), Gaps = 77/442 (17%)
Query: 135 KASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVE 194
K GP S N ++ L + ++ AK I ++K V PD TY ++ G+C +G V+
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVG-LMKRNGVCPDAVTYGCLLHGYCSVGKVD 413
Query: 195 SARKVFDEM---RCEPNAITYNTMIH---------------------------------- 217
+A+ + EM C PNA T N ++H
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473
Query: 218 -GLCKKGEMDGA------MRVFNRFAESK----------------SCRPDVVTFTTLIDG 254
GLC GE+D A MRV A +C PD++T++TL++G
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNG 533
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
K G EA N EM + QP+ V YN I C G + A R++ M KG +
Sbjct: 534 LCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKS 593
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
+ T S++ G + + E M EM +G+ ++ Y+ + C+ K +A ++L
Sbjct: 594 LETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLD 653
Query: 375 EMVAKRMKPSVSSFNAVFRVL-------VAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI 427
EM+ K + P+V SF + +A+ E AV + C YS++
Sbjct: 654 EMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI--------CGQKEGLYSLMF 705
Query: 428 CGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSF 487
L G++ EL+ ++L G L +Y L+ C+ + E+A ++ MID+ +
Sbjct: 706 NELL-AAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGY 764
Query: 488 LFNKDTYCTFVKELCAKGKVKE 509
F+ + L G KE
Sbjct: 765 GFDPAALMPVIDGLGKMGNKKE 786
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 195/452 (43%), Gaps = 71/452 (15%)
Query: 128 IHWFHKAK---ASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMI 184
+ W +K P + N ++ L ++ V+ A+ ++D++ ++ +P+ FT+ ++
Sbjct: 131 VSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG-CKPNEFTFGILV 189
Query: 185 RGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSC 241
RG+CK G+ + ++ + M PN + YNT++ C++G D + ++ + E +
Sbjct: 190 RGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMRE-EGL 248
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGC----QPNVVTYNALIEGLCLSGNVD 297
PD+VTF + I K G+V +A +M+ +PN +TYN +++G C G ++
Sbjct: 249 VPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLE 308
Query: 298 EAKRM-----------------------------------MSKMRLKGIKDNVATNTSML 322
+AK + + +M KGI ++ + ++
Sbjct: 309 DAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILM 368
Query: 323 KGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMK 382
G C +G +A + M G+ D Y +++ YC +GK A S+L+EM+
Sbjct: 369 DGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL 428
Query: 383 PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEE 442
P+ + N + L ++ EA LL+ M G + ++ +I++ GLC G + E
Sbjct: 429 PNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG-SGELDKAIE 487
Query: 443 LVSSMLQSGH----NL-------------------DATMYNCLLGGYCEDGDEEMALKTV 479
+V M G NL D Y+ LL G C+ G A
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLF 547
Query: 480 YDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
+M+ + + Y F+ C +GK+ +
Sbjct: 548 AEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 148/381 (38%), Gaps = 101/381 (26%)
Query: 82 AITDVLLSHSLF-----STADSLLRRSNK----LSDFLASKFINAFGDRGDIRGAIHWFH 132
A T +L HSL+ S A+ LLR+ N+ L + ++ G++ AI
Sbjct: 431 AYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 133 KAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVE----PDVFTYTTMIRGFC 188
+ G AL NL + Y +V ++L+E PD+ TY+T++ G C
Sbjct: 491 GMRVHGSAALG--------------NLGNS-YIGLVDDSLIENNCLPDLITYSTLLNGLC 535
Query: 189 KMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDV 245
K G A+ +F EM + +P+++ YN IH CK+G++ A RV E K C +
Sbjct: 536 KAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM-EKKGCHKSL 594
Query: 246 VTFTTLIDGYSKRGEVQEALNCMKEMQEQG---------------CQ------------- 277
T+ +LI G + ++ E M EM+E+G C+
Sbjct: 595 ETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDE 654
Query: 278 -------PNVVTYNALIEGLC----------------------------------LSGNV 296
PNV ++ LIE C +G +
Sbjct: 655 MMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQL 714
Query: 297 DEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVI 356
+A ++ + +G + +++ C E A + +M+ RG D A +
Sbjct: 715 LKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPV 774
Query: 357 VNEYCKIGKPSEAVSILREMV 377
++ K+G EA S +M+
Sbjct: 775 IDGLGKMGNKKEANSFADKMM 795
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 15/242 (6%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASGPCALSCNA----VLGVLVRANRVNLAKAIYDQVVK 169
FI+ F +G I A + G C S +LG+ ++ N++ + D++ K
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKG-CHKSLETYNSLILGLGIK-NQIFEIHGLMDEM-K 621
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMD 226
E + P++ TY T I+ C+ VE A + DEM PN ++ +I CK + D
Sbjct: 622 EKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFD 681
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
A VF C ++ + + G++ +A ++ + ++G + Y L
Sbjct: 682 MAQEVFE--TAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDL 739
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEA---IKHMKEMVS 343
+E LC ++ A ++ KM +G + A ++ G +G +EA M EM S
Sbjct: 740 VESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMAS 799
Query: 344 RG 345
G
Sbjct: 800 VG 801
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 193/378 (51%), Gaps = 18/378 (4%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
+ C+ +L L + R++ A ++++Q+ + L PD+ Y+ +I G CK+G + A ++D
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGL-SPDLVAYSIVIHGLCKLGKFDMALWLYD 422
Query: 202 EM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
EM R PN+ T+ ++ GLC+KG + A + + S D+V + +IDGY+K
Sbjct: 423 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL-DIVLYNIVIDGYAKS 481
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
G ++EAL K + E G P+V T+N+LI G C + N+ EA++++ ++L G+ +V +
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
T+++ + G ++ + +EM + G+ YSVI C+ K +LRE +
Sbjct: 542 TTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 379 KRMK------------PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
++ K P ++N + + L + L A + L+ M + +Y+I+
Sbjct: 602 EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNIL 661
Query: 427 ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKS 486
I LC V G ++ + + S+ + +L Y L+ +C GD EMA+K + ++ +
Sbjct: 662 IDSLC-VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Query: 487 FLFNKDTYCTFVKELCAK 504
F + Y + LC +
Sbjct: 721 FNVSIRDYSAVINRLCRR 738
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 169/335 (50%), Gaps = 6/335 (1%)
Query: 179 TYTTMIRGFCKMGMVESA---RKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRF 235
TY+T++ G C+ +E A + + P+ +++N+++ G CK G +D A F
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 236 AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
+ P V + LI+G G + EAL +M + G +P+ VTYN L +G L G
Sbjct: 249 LKC-GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD-VKAYS 354
+ A ++ M KG+ +V T T +L G C +G + + +K+M+SRG +L+ + S
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 355 VIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRM 414
V+++ CK G+ EA+S+ +M A + P + +++ V L K + A+ L M
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 415 GCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEM 474
PN ++ ++ GLC+ KG + L+ S++ SG LD +YN ++ GY + G E
Sbjct: 428 RILPNSRTHGALLLGLCQ-KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 475 ALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
AL+ +I+ + T+ + + C + E
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 172/378 (45%), Gaps = 42/378 (11%)
Query: 135 KASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVE 194
K GP +S N+++ + V++AK+ + V+K LV P V+++ +I G C +G +
Sbjct: 216 KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLV-PSVYSHNILINGLCLVGSIA 274
Query: 195 SARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTL 251
A ++ +M EP+++TYN + G G + GA V + K PDV+T+T L
Sbjct: 275 EALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD-KGLSPDVITYTIL 333
Query: 252 ------------------------------------IDGYSKRGEVQEALNCMKEMQEQG 275
+ G K G + EAL+ +M+ G
Sbjct: 334 LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADG 393
Query: 276 CQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAI 335
P++V Y+ +I GLC G D A + +M K I N T+ ++L G C G EA
Sbjct: 394 LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR 453
Query: 336 KHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVL 395
+ ++S G LD+ Y+++++ Y K G EA+ + + ++ + PSV++FN++
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 513
Query: 396 VAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLD 455
+ + EA +L + G +P+ +SY+ ++ G + ++EL M G
Sbjct: 514 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC-GNTKSIDELRREMKAEGIPPT 572
Query: 456 ATMYNCLLGGYCEDGDEE 473
Y+ + G C E
Sbjct: 573 NVTYSVIFKGLCRGWKHE 590
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 150/323 (46%), Gaps = 18/323 (5%)
Query: 56 ALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFI 115
AL+ ++ + + PN+ +H +L + S DSL+ L L + I
Sbjct: 417 ALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR-SLLDSLISSGETLDIVLYNIVI 475
Query: 116 NAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALV 173
+ + G I A+ F +G P + N+++ + + A+ I D V+K +
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD-VIKLYGL 534
Query: 174 EPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGA-- 228
P V +YTT++ + G +S ++ EM+ E P +TY+ + GLC+ + +
Sbjct: 535 APSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 594
Query: 229 ---MRVFN------RFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPN 279
R+F R ES+ PD +T+ T+I + + A ++ M+ + +
Sbjct: 595 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 654
Query: 280 VVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMK 339
TYN LI+ LC+ G + +A + ++ + + + T+++K C+ G E A+K
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 714
Query: 340 EMVSRGMDLDVKAYSVIVNEYCK 362
+++ RG ++ ++ YS ++N C+
Sbjct: 715 QLLHRGFNVSIRDYSAVINRLCR 737
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 16/278 (5%)
Query: 234 RFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
R ES D++ F + S+ V ++L +K+M++Q + +YN+++
Sbjct: 118 RKWESTGLVWDMLLFLS-----SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLY----- 167
Query: 294 GNVDEAKRMMSKMRLKGIKD-NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKA 352
+ E +M K IKD N T ++++ G C + E+A+ ++ + + V +
Sbjct: 168 -HFRETDKMWDVY--KEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS 224
Query: 353 YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
++ I++ YCK+G A S ++ + PSV S N + L + EA+ L +M
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 413 RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDE 472
+ G P+ ++Y+I+ G + G + E++ ML G + D Y LL G C+ G+
Sbjct: 285 KHGVEPDSVTYNILAKGF-HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI 343
Query: 473 EMALKTVYDMIDKSFLFNKDTYCT-FVKELCAKGKVKE 509
+M L + DM+ + F N C+ + LC G++ E
Sbjct: 344 DMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDE 381
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 193/378 (51%), Gaps = 18/378 (4%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
+ C+ +L L + R++ A ++++Q+ + L PD+ Y+ +I G CK+G + A ++D
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGL-SPDLVAYSIVIHGLCKLGKFDMALWLYD 422
Query: 202 EM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
EM R PN+ T+ ++ GLC+KG + A + + S D+V + +IDGY+K
Sbjct: 423 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL-DIVLYNIVIDGYAKS 481
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
G ++EAL K + E G P+V T+N+LI G C + N+ EA++++ ++L G+ +V +
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
T+++ + G ++ + +EM + G+ YSVI C+ K +LRE +
Sbjct: 542 TTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 379 KRMK------------PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
++ K P ++N + + L + L A + L+ M + +Y+I+
Sbjct: 602 EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNIL 661
Query: 427 ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKS 486
I LC V G ++ + + S+ + +L Y L+ +C GD EMA+K + ++ +
Sbjct: 662 IDSLC-VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Query: 487 FLFNKDTYCTFVKELCAK 504
F + Y + LC +
Sbjct: 721 FNVSIRDYSAVINRLCRR 738
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 169/335 (50%), Gaps = 6/335 (1%)
Query: 179 TYTTMIRGFCKMGMVESA---RKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRF 235
TY+T++ G C+ +E A + + P+ +++N+++ G CK G +D A F
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 236 AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
+ P V + LI+G G + EAL +M + G +P+ VTYN L +G L G
Sbjct: 249 LKC-GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD-VKAYS 354
+ A ++ M KG+ +V T T +L G C +G + + +K+M+SRG +L+ + S
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 355 VIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRM 414
V+++ CK G+ EA+S+ +M A + P + +++ V L K + A+ L M
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 415 GCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEM 474
PN ++ ++ GLC+ KG + L+ S++ SG LD +YN ++ GY + G E
Sbjct: 428 RILPNSRTHGALLLGLCQ-KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 475 ALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
AL+ +I+ + T+ + + C + E
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 172/378 (45%), Gaps = 42/378 (11%)
Query: 135 KASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVE 194
K GP +S N+++ + V++AK+ + V+K LV P V+++ +I G C +G +
Sbjct: 216 KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLV-PSVYSHNILINGLCLVGSIA 274
Query: 195 SARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTL 251
A ++ +M EP+++TYN + G G + GA V + K PDV+T+T L
Sbjct: 275 EALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD-KGLSPDVITYTIL 333
Query: 252 ------------------------------------IDGYSKRGEVQEALNCMKEMQEQG 275
+ G K G + EAL+ +M+ G
Sbjct: 334 LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADG 393
Query: 276 CQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAI 335
P++V Y+ +I GLC G D A + +M K I N T+ ++L G C G EA
Sbjct: 394 LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR 453
Query: 336 KHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVL 395
+ ++S G LD+ Y+++++ Y K G EA+ + + ++ + PSV++FN++
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 513
Query: 396 VAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLD 455
+ + EA +L + G +P+ +SY+ ++ G + ++EL M G
Sbjct: 514 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC-GNTKSIDELRREMKAEGIPPT 572
Query: 456 ATMYNCLLGGYCEDGDEE 473
Y+ + G C E
Sbjct: 573 NVTYSVIFKGLCRGWKHE 590
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 150/323 (46%), Gaps = 18/323 (5%)
Query: 56 ALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFI 115
AL+ ++ + + PN+ +H +L + S DSL+ L L + I
Sbjct: 417 ALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR-SLLDSLISSGETLDIVLYNIVI 475
Query: 116 NAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALV 173
+ + G I A+ F +G P + N+++ + + A+ I D V+K +
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD-VIKLYGL 534
Query: 174 EPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGA-- 228
P V +YTT++ + G +S ++ EM+ E P +TY+ + GLC+ + +
Sbjct: 535 APSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 594
Query: 229 ---MRVFN------RFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPN 279
R+F R ES+ PD +T+ T+I + + A ++ M+ + +
Sbjct: 595 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 654
Query: 280 VVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMK 339
TYN LI+ LC+ G + +A + ++ + + + T+++K C+ G E A+K
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 714
Query: 340 EMVSRGMDLDVKAYSVIVNEYCK 362
+++ RG ++ ++ YS ++N C+
Sbjct: 715 QLLHRGFNVSIRDYSAVINRLCR 737
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 16/278 (5%)
Query: 234 RFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
R ES D++ F + S+ V ++L +K+M++Q + +YN+++
Sbjct: 118 RKWESTGLVWDMLLFLS-----SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLY----- 167
Query: 294 GNVDEAKRMMSKMRLKGIKD-NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKA 352
+ E +M K IKD N T ++++ G C + E+A+ ++ + + V +
Sbjct: 168 -HFRETDKMWDVY--KEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS 224
Query: 353 YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
++ I++ YCK+G A S ++ + PSV S N + L + EA+ L +M
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 413 RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDE 472
+ G P+ ++Y+I+ G + G + E++ ML G + D Y LL G C+ G+
Sbjct: 285 KHGVEPDSVTYNILAKGF-HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI 343
Query: 473 EMALKTVYDMIDKSFLFNKDTYCT-FVKELCAKGKVKE 509
+M L + DM+ + F N C+ + LC G++ E
Sbjct: 344 DMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDE 381
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 197/426 (46%), Gaps = 43/426 (10%)
Query: 121 RGDIRGAIHWFHKAKASGPCALSC--NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVF 178
+G + AI K+ G A C N ++ L R+NR+ + + K ++ P+
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR-MIHPNEV 339
Query: 179 TYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRF 235
TY T+I GF G V A ++ +EM PN +T+N +I G +G A+++F
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF-YM 398
Query: 236 AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
E+K P V++ L+DG K E A M+ G +TY +I+GLC +G
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRS------------------------ 331
+DEA ++++M GI ++ T ++++ GFC VGR
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 332 -----------EEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKR 380
+EAI+ + M+ G D ++V+V CK GK +EA +R M +
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Query: 381 MKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLV 440
+ P+ SF+ + + +A + M ++G P F +Y ++ GLCK G ++
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK-GGHLREA 637
Query: 441 EELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKE 500
E+ + S+ +D MYN LL C+ G+ A+ +M+ +S L + TY + +
Sbjct: 638 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 697
Query: 501 LCAKGK 506
LC KGK
Sbjct: 698 LCRKGK 703
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 193/409 (47%), Gaps = 9/409 (2%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
I + G I+ ++ F G P +CNA+LG +V++ + +++K
Sbjct: 169 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 228
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGA 228
+ PDV T+ +I C G E + + +M P +TYNT++H CKKG A
Sbjct: 229 IC-PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 287
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
+ + + +SK DV T+ LI + + + +++M+++ PN VTYN LI
Sbjct: 288 IELLDHM-KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 346
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
G G V A +++++M G+ N T +++ G G +EA+K M ++G+
Sbjct: 347 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 406
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
+Y V+++ CK + A M + ++ + L L+EAV+LL
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 466
Query: 409 KNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCE 468
M + G P+ ++YS +I G CKV GR + +E+V + + G + + +Y+ L+ C
Sbjct: 467 NEMSKDGIDPDIVTYSALINGFCKV-GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 525
Query: 469 DGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE-EYLKRCV 516
G + A++ MI + + T+ V LC GKV E E RC+
Sbjct: 526 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 574
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 181/389 (46%), Gaps = 9/389 (2%)
Query: 130 WFHKAKASGPCA--LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGF 187
++ + K +G C ++ ++ L + ++ A + +++ K+ ++PD+ TY+ +I GF
Sbjct: 430 FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG-IDPDIVTYSALINGF 488
Query: 188 CKMGMVESARKV---FDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPD 244
CK+G ++A+++ + PN I Y+T+I+ C+ G + A+R++ R D
Sbjct: 489 CKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR-D 547
Query: 245 VVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMS 304
TF L+ K G+V EA M+ M G PN V+++ LI G SG +A +
Sbjct: 548 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 607
Query: 305 KMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIG 364
+M G T S+LKG C G EA K +K + + +D Y+ ++ CK G
Sbjct: 608 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 667
Query: 365 KPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMG-CSPNFLSY 423
++AVS+ EMV + + P ++ ++ L + K A+L K G PN + Y
Sbjct: 668 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 727
Query: 424 SIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMI 483
+ + G+ K G+ + M GH D N ++ GY G E + +M
Sbjct: 728 TCFVDGMFKA-GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 786
Query: 484 DKSFLFNKDTYCTFVKELCAKGKVKEEYL 512
+++ N TY + + V +L
Sbjct: 787 NQNGGPNLTTYNILLHGYSKRKDVSTSFL 815
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 158/333 (47%), Gaps = 5/333 (1%)
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRV 231
PD+ T MI G+ +MG +E + EM + PN TYN ++HG K+ ++ + +
Sbjct: 757 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 816
Query: 232 FNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLC 291
+ R PD +T +L+ G + ++ L +K +G + + T+N LI C
Sbjct: 817 Y-RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 875
Query: 292 LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
+G ++ A ++ M GI + T +M+ R +E+ + EM +G+ + +
Sbjct: 876 ANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 935
Query: 352 AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
Y ++N C++G A + EM+A ++ P + +A+ R L K +EA LLL+ M
Sbjct: 936 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM 995
Query: 412 PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGD 471
+M P S++ ++ CK G + EL M G LD YN L+ G C GD
Sbjct: 996 LKMKLVPTIASFTTLMHLCCK-NGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGD 1054
Query: 472 EEMALKTVYDMIDKSFLFNKDTYCTFVKELCAK 504
+A + +M FL N TY ++ L A+
Sbjct: 1055 MALAFELYEEMKGDGFLANATTYKALIRGLLAR 1087
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 200/434 (46%), Gaps = 17/434 (3%)
Query: 93 FSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSC---NAVLG 149
FS D + + + + F + G +R A F K+ + P A+ N +L
Sbjct: 603 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA-EKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 150 VLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE--- 206
+ ++ + A +++ ++V+ +++ PD +TYT++I G C+ G A E
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSIL-PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 720
Query: 207 -PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL 265
PN + Y + G+ K G+ + F ++ PD+VT +IDGYS+ G++++
Sbjct: 721 LPNKVMYTCFVDGMFKAGQWKAGI-YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 779
Query: 266 NCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGF 325
+ + EM Q PN+ TYN L+ G +V + + + L GI + T S++ G
Sbjct: 780 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 839
Query: 326 CMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSV 385
C E +K +K + RG+++D +++++++ C G+ + A +++ M + +
Sbjct: 840 CESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK 899
Query: 386 SSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKV---KGRMQLVEE 442
+ +A+ VL + +E+ ++L M + G SP Y +I GLC+V K + EE
Sbjct: 900 DTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEE 959
Query: 443 LVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELC 502
+++ + + ++ M L C DE L + M+ + ++ T + C
Sbjct: 960 MIAHKICPPNVAESAMVRAL--AKCGKADEATLL--LRFMLKMKLVPTIASFTTLMHLCC 1015
Query: 503 AKGKVKEEYLKRCV 516
G V E R V
Sbjct: 1016 KNGNVIEALELRVV 1029
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 143/305 (46%), Gaps = 2/305 (0%)
Query: 205 CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEA 264
C N Y+ +I ++G + ++ +F R P V T ++ K GE
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIF-RLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 217
Query: 265 LNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKG 324
+ +KEM ++ P+V T+N LI LC G+ +++ +M KM G + T ++L
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 325 FCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPS 384
+C GR + AI+ + M S+G+D DV Y++++++ C+ + ++ +LR+M + + P+
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 385 VSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELV 444
++N + E K+ A LL M G SPN ++++ +I G +G + ++
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS-EGNFKEALKMF 396
Query: 445 SSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAK 504
M G Y LL G C++ + ++A M + TY + LC
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456
Query: 505 GKVKE 509
G + E
Sbjct: 457 GFLDE 461
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 138/332 (41%), Gaps = 41/332 (12%)
Query: 137 SGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESA 196
GP + N +L + V+ + +Y ++ ++ PD T +++ G C+ M+E
Sbjct: 790 GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL-PDKLTCHSLVLGICESNMLEIG 848
Query: 197 RKVFDEMRC---EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLID 253
K+ C E + T+N +I C GE++ A + + S D T ++
Sbjct: 849 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLV-KVMTSLGISLDKDTCDAMVS 907
Query: 254 GYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKD 313
++ QE+ + EM +QG P Y LI GLC G++ A + +M I
Sbjct: 908 VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 967
Query: 314 NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL 373
++M++ G+++EA ++ M+ + + +++ +++ CK G EA+ +
Sbjct: 968 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL- 1026
Query: 374 REMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKV 433
RV+ M G + +SY+++I GLC
Sbjct: 1027 -------------------RVV---------------MSNCGLKLDLVSYNVLITGLC-A 1051
Query: 434 KGRMQLVEELVSSMLQSGHNLDATMYNCLLGG 465
KG M L EL M G +AT Y L+ G
Sbjct: 1052 KGDMALAFELYEEMKGDGFLANATTYKALIRG 1083
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 353 YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
Y +++ Y + G +++ I R M PSV + NA+ +V + LK M
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225
Query: 413 RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDE 472
+ P+ +++I+I LC +G + L+ M +SG+ YN +L YC+ G
Sbjct: 226 KRKICPDVATFNILINVLC-AEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284
Query: 473 EMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYL 512
+ A++ + M K + TY + +LC ++ + YL
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 324
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 201/407 (49%), Gaps = 11/407 (2%)
Query: 64 SNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGD 123
S+P P+ ++S A + SLF + +L S+ L F + I+ F
Sbjct: 73 SHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE-MLGISHDLYSF--TTLIDCFCRCAR 129
Query: 124 IRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYT 181
+ A+ K G P ++ +++ NR A ++ DQ+V EP+V Y
Sbjct: 130 LSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG-YEPNVVIYN 188
Query: 182 TMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAES 238
T+I C+ G V +A V M+ P+ +TYN++I L G + R+ +
Sbjct: 189 TIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMR- 247
Query: 239 KSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDE 298
PDV+TF+ LID Y K G++ EA EM ++ PN+VTYN+LI GLC+ G +DE
Sbjct: 248 MGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDE 307
Query: 299 AKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVN 358
AK++++ + KG N T +++ G+C R ++ +K + M G+D D Y+ +
Sbjct: 308 AKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQ 367
Query: 359 EYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSP 418
YC+ GK S A +L MV+ + P + +FN + L K+ +A++ L+++ +
Sbjct: 368 GYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVV 427
Query: 419 NFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGG 465
++Y+I+I GLCK +++ L S+ G + D Y ++ G
Sbjct: 428 GIITYNIIIKGLCKAD-KVEDAWYLFCSLALKGVSPDVITYITMMIG 473
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 204/416 (49%), Gaps = 19/416 (4%)
Query: 117 AFGDRGDIRGAIH-WFHKAKASGPCALSCNAV----LGVLVRANRVNLAKAI---YDQVV 168
AF R D R + H K + L C+ L +V +R+ +A A Y+ V+
Sbjct: 40 AFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVI 99
Query: 169 K-----EAL-VEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGL 219
E L + D++++TT+I FC+ + A +M EP+ +T+ ++++G
Sbjct: 100 SLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGF 159
Query: 220 CKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPN 279
C AM + ++ P+VV + T+ID ++G+V AL+ +K M++ G +P+
Sbjct: 160 CHVNRFYEAMSLVDQIV-GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPD 218
Query: 280 VVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMK 339
VVTYN+LI L SG + R++S M GI +V T ++++ + G+ EA K
Sbjct: 219 VVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYN 278
Query: 340 EMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAER 399
EM+ R ++ ++ Y+ ++N C G EA +L +V+K P+ ++N + +
Sbjct: 279 EMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAK 338
Query: 400 KLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMY 459
++++ + +L M R G + +Y+ + G C+ G+ E+++ M+ G + D +
Sbjct: 339 RVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQA-GKFSAAEKVLGRMVSCGVHPDMYTF 397
Query: 460 NCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLKRC 515
N LL G C+ G AL + D+ + TY +K LC KV++ + C
Sbjct: 398 NILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFC 453
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 151/305 (49%), Gaps = 7/305 (2%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
I++ ++G + A+ K G P ++ N+++ L + ++ I +++
Sbjct: 190 IIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMG 249
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGA 228
+ PDV T++ +I + K G + A+K ++EM PN +TYN++I+GLC G +D A
Sbjct: 250 -ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEA 308
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
+V N SK P+ VT+ TLI+GY K V + + + M G + TYN L +
Sbjct: 309 KKVLNVLV-SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQ 367
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
G C +G A++++ +M G+ ++ T +L G C G+ +A+ ++++ +
Sbjct: 368 GYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVV 427
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
+ Y++I+ CK K +A + + K + P V ++ + L +R EA L
Sbjct: 428 GIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELY 487
Query: 409 KNMPR 413
+ M +
Sbjct: 488 RKMQK 492
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 152/312 (48%), Gaps = 4/312 (1%)
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALN 266
P+ + ++ ++ + K + + + +F R E D+ +FTTLID + + + AL+
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLF-RHLEMLGISHDLYSFTTLIDCFCRCARLSLALS 135
Query: 267 CMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC 326
C+ +M + G +P++VT+ +L+ G C EA ++ ++ G + NV +++ C
Sbjct: 136 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195
Query: 327 MVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVS 386
G+ A+ +K M G+ DV Y+ ++ G + IL +M+ + P V
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVI 255
Query: 387 SFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSS 446
+F+A+ V E +L EA M + +PN ++Y+ +I GLC + G + +++++
Sbjct: 256 TFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC-IHGLLDEAKKVLNV 314
Query: 447 MLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGK 506
++ G +A YN L+ GYC+ + +K + M + TY T + C GK
Sbjct: 315 LVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGK 374
Query: 507 VK--EEYLKRCV 516
E+ L R V
Sbjct: 375 FSAAEKVLGRMV 386
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNA---ITYNTMIHGLCKKGEMDGAM 229
V PD++T+ ++ G C G + A ++++ ITYN +I GLCK +++ A
Sbjct: 390 VHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAW 449
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQ-EQGCQP 278
+F A K PDV+T+ T++ G ++ +EA ++MQ E G P
Sbjct: 450 YLFCSLA-LKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 190/370 (51%), Gaps = 6/370 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + N +L + + + ++ ++ +++ + +V ++TY +I FC+ + A
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHG-LYTYNILINCFCRRSQISLALA 141
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+ +M EP+ +T +++++G C + A+ + ++ E RPD +TFTTLI G
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE-MGYRPDTITFTTLIHGL 200
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+ EA+ + M ++GCQPN+VTY ++ GLC G+ D A +++KM I+ +V
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
+++ C ++A+ KEM ++G+ +V YS +++ C G+ S+A +L +
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
M+ K++ P++ +FNA+ V E K EA L +M + P+ +Y+ ++ G C +
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC-MHD 379
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYC 495
R+ +++ M+ D YN L+ G+C+ E + +M + + + TY
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 496 TFVKELCAKG 505
T ++ L G
Sbjct: 440 TLIQGLFHDG 449
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 200/412 (48%), Gaps = 30/412 (7%)
Query: 41 SLVTQVIKNTHNPH--------HALFFFNWASNP------------QPNPNNYSHPRSCY 80
+LV Q+++ + P H LF N AS QPN Y +
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 81 AAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG-- 138
D L+ +L + ++ ++ + + + I++ + A++ F + + G
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVV---IFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ ++++ L R + A + ++ E + P++ T+ +I F K G A K
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 199 VFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
++D+M +P+ TYN++++G C +D A ++F F SK C PDVVT+ TLI G+
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF-EFMVSKDCFPDVVTYNTLIKGF 410
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K V++ +EM +G + VTY LI+GL G+ D A+++ +M G+ ++
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T + +L G C G+ E+A++ M + LD+ Y+ ++ CK GK + +
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI 427
+ K +KP+V ++N + L ++R L+EA LLK M G PN +Y+ +I
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 216/445 (48%), Gaps = 18/445 (4%)
Query: 82 AITDVLLSHSLF---------STADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFH 132
IT L H LF + D +++R + + +N RGD A++ +
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLN 249
Query: 133 KAKASGPCA--LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKM 190
K +A+ A + N ++ L + V+ A ++ ++ + + P+V TY+++I C
Sbjct: 250 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSY 308
Query: 191 GMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVT 247
G A ++ +M + PN +T+N +I K+G+ A ++++ + +S PD+ T
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK-RSIDPDIFT 367
Query: 248 FTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR 307
+ +L++G+ + +A + M + C P+VVTYN LI+G C S V++ + +M
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 308 LKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPS 367
+G+ + T T++++G G + A K K+MVS G+ D+ YS++++ C GK
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 368 EAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI 427
+A+ + M +K + + + + K+++ L ++ G PN ++Y+ +I
Sbjct: 488 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 428 CGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSF 487
GLC K +Q L+ M + G ++ YN L+ + DGD+ + + + +M F
Sbjct: 548 SGLCS-KRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 606
Query: 488 LFNKDTYCTFVKELCAKGKVKEEYL 512
+ + T V + G++ + +L
Sbjct: 607 VGDAST-IGLVANMLHDGRLDKSFL 630
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
++ +A+ M + P++V +N L+ + D + KM+ I + T
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
++ FC + A+ + +M+ G + + S ++N YC + S+AV+++ +MV
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
+P +F + L K EAV L+ M + GC PN ++Y +V+ GLCK +G L
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK-RGDTDL 243
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
L++ M + D ++N ++ C+ + AL +M K N TY + +
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 500 ELCAKGK 506
LC+ G+
Sbjct: 304 CLCSYGR 310
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 200/423 (47%), Gaps = 9/423 (2%)
Query: 88 LSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAV 147
+SH LF+ + + +S K S + S I F + G A+ W + P + +C ++
Sbjct: 114 MSHRLFNALEDI--QSPKFSIGVFSLLIMEFLEMGLFEEAL-WVSREMKCSPDSKACLSI 170
Query: 148 LGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR--- 204
L LVR R + Y ++ LV PDV Y + + K G+ K+ DEM
Sbjct: 171 LNGLVRRRRFDSVWVDYQLMISRGLV-PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229
Query: 205 CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEA 264
+PN Y I LC+ +M+ A ++F + P++ T++ +IDGY K G V++A
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMF-ELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 265 LNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKG 324
KE+ PNVV + L++G C + + A+ + M G+ N+ ++ G
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG 348
Query: 325 FCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPS 384
C G EA+ + EM S + DV Y++++N C + +EA + ++M +R+ PS
Sbjct: 349 HCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPS 408
Query: 385 VSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELV 444
+++N++ E +E+A+ L M G PN +++S +I G C V+ ++ L
Sbjct: 409 SATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD-IKAAMGLY 467
Query: 445 SSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAK 504
M G D Y L+ + ++ + + AL+ DM++ N T+ V +
Sbjct: 468 FEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKE 527
Query: 505 GKV 507
G++
Sbjct: 528 GRL 530
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 180/378 (47%), Gaps = 11/378 (2%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + +A++ + V A +Y +++ L+ P+V + T++ GFCK + +AR
Sbjct: 267 PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELL-PNVVVFGTLVDGFCKARELVTARS 325
Query: 199 VFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+F M +PN YN +IHG CK G M A+ + + ES + PDV T+T LI+G
Sbjct: 326 LFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM-ESLNLSPDVFTYTILINGL 384
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+V EA ++M+ + P+ TYN+LI G C N+++A + S+M G++ N+
Sbjct: 385 CIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNI 444
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T ++++ G+C V + A+ EM +G+ DV Y+ +++ + K EA+ + +
Sbjct: 445 ITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSD 504
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
M+ + P+ +F + E +L A+ + + N + ++ +I GLC+ G
Sbjct: 505 MLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQ-NG 563
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYC 495
+ S M G D Y +L G+ ++ + DMI L N
Sbjct: 564 YILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN----- 618
Query: 496 TFVKELCAKGKVKEEYLK 513
V +L A+ Y+K
Sbjct: 619 LLVNQLLARFYQANGYVK 636
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 98/210 (46%), Gaps = 11/210 (5%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
S I+ + + DI+ A+ + + G P ++ A++ + + A +Y ++
Sbjct: 448 STLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML- 506
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDE---MRCEPNAITYNTMIHGLCKKGEMD 226
EA + P+ T+ ++ GF K G + A + E R N + + +I GLC+ G +
Sbjct: 507 EAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYIL 566
Query: 227 GAMRVFNRFAESKSC--RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
A R F ++ +SC PD+ ++ +++ G+ + + + + +M + G PN++
Sbjct: 567 RASRFF---SDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQ 623
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
L +G V A + + RLK + ++
Sbjct: 624 LLARFYQANGYVKSACFLTNSSRLKTVSNS 653
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 193/395 (48%), Gaps = 25/395 (6%)
Query: 127 AIHWFHKAKASGP--CALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMI 184
AI +F S P A+ CN V+GV VR NR ++A ++Y ++ + + +++++ +I
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKM-EIRRIPLNIYSFNILI 148
Query: 185 RGFC---KMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESK-- 239
+ FC K+ S ++ +P+ +T+NT++HGLC + + A+ +F E+
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 240 ------------SCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
P V+TF TLI+G G V EA + +M +G +VVTY ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMD 347
G+C G+ A ++SKM IK +V ++++ C G +A EM+ +G+
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
+V Y+ +++ +C G+ S+A +LR+M+ + + P V +FNA+ V E KL EA L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 408 LKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
M P+ ++Y+ +I G CK R + + M D +N ++ YC
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCK-HNRFDDAKHMFDLMASP----DVVTFNTIIDVYC 443
Query: 468 EDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELC 502
+ ++ + ++ + + N TY T + C
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC 478
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 181/382 (47%), Gaps = 47/382 (12%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
+N GD + A++ K + + P + +A++ L + + A+ ++ +++++
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG- 326
Query: 173 VEPDVFTYTTMIRGFCKMG-----------MVE------------------------SAR 197
+ P+VFTY MI GFC G M+E A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 198 KVFDEM--RC-EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDG 254
K+ DEM RC P+ +TYN+MI+G CK D A +F+ A PDVVTF T+ID
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-----PDVVTFNTIIDV 441
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
Y + V E + ++E+ +G N TYN LI G C N++ A+ + +M G+ +
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
T +L GFC + EEA++ + + +DLD AY++I++ CK K EA +
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
+ ++P V ++N + + + +A +L M G P+ +Y+ +I G C
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG-CLKA 620
Query: 435 GRMQLVEELVSSMLQSGHNLDA 456
G + EL+S M +G + DA
Sbjct: 621 GEIDKSIELISEMRSNGFSGDA 642
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 147/289 (50%), Gaps = 5/289 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P L+ NA++ V+ ++ A+ + D+++ + PD TY +MI GFCK + A+
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF-PDTVTYNSMIYGFCKHNRFDDAKH 422
Query: 199 VFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
+FD M P+ +T+NT+I C+ +D M++ + + + T+ TLI G+ +
Sbjct: 423 MFDLM-ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR-RGLVANTTTYNTLIHGFCEV 480
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIK-DNVAT 317
+ A + +EM G P+ +T N L+ G C + ++EA + +++ I D VA
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 318 NTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMV 377
N ++ G C + +EA + G++ DV+ Y+V+++ +C S+A + +M
Sbjct: 541 NI-IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 378 AKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
+P S++N + R + ++++++ L+ M G S + + +V
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 149/348 (42%), Gaps = 61/348 (17%)
Query: 193 VESARKVFDEM-RCEP--NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
++ A FD M R P A+ N +I + D A+ ++ R E + ++ +F
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLY-RKMEIRRIPLNIYSFN 145
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
LI + ++ +L+ ++ + G QP+VVT+N L+ GLCL + EA + M
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 310 GIKDNVA---------------TNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYS 354
G + VA T +++ G C+ GR EA + +MV +G+ +DV Y
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 355 VIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRM 414
IVN CK+G A+++L +M +KP V
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDV----------------------------- 296
Query: 415 GCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEM 474
+ YS +I LCK G + L S ML+ G + YNC++ G+C G
Sbjct: 297 ------VIYSAIIDRLCK-DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 475 ALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE------EYLKRCV 516
A + + DMI++ + T+ + +GK+ E E L RC+
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 397
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 216/468 (46%), Gaps = 25/468 (5%)
Query: 56 ALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASK-- 113
AL FF +N N + H + + L + LL++ KL F S+
Sbjct: 59 ALHFFKSIANS----NLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQM-KLQGFHCSEDL 113
Query: 114 ---FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVV 168
I+ + G A+ F++ K G P N VL L+ NR+ + +Y +
Sbjct: 114 FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK 173
Query: 169 KEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEM 225
++ EP+VFTY +++ CK V+ A+K+ EM C P+A++Y T+I +C+ G +
Sbjct: 174 RDGF-EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLV 232
Query: 226 DGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNA 285
+ RF P V + LI+G K + + A M+EM E+G PNV++Y+
Sbjct: 233 KEGRELAERF------EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286
Query: 286 LIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV-SR 344
LI LC SG ++ A +++M +G N+ T +S++KG + G + +A+ +M+
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA 404
G+ +V AY+ +V +C G +AVS+ M P++ ++ ++ L+ A
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 405 VLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLG 464
V + M GC PN + Y+ ++ LC+ + + E L+ M + +N +
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCR-HSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 465 GYCEDGDEEMALKTVYDMIDKSFL-FNKDTYCTFVKELCAKGKVKEEY 511
G C+ G + A K M + N TY + L +++E Y
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 188/364 (51%), Gaps = 14/364 (3%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVL-GVLVRANRVNLAKAIYDQVV 168
S IN + G I A + + G P + ++++ G +R + A +++Q++
Sbjct: 285 STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD-ALDLWNQMI 343
Query: 169 KEALVEPDVFTYTTMIRGFCKMGMVESARKVF---DEMRCEPNAITYNTMIHGLCKKGEM 225
+ ++P+V Y T+++GFC G + A VF +E+ C PN TY ++I+G K+G +
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL 403
Query: 226 DGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNA 285
DGA+ ++N+ S C P+VV +T +++ + + +EA + ++ M ++ C P+V T+NA
Sbjct: 404 DGAVYIWNKMLTSGCC-PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNA 462
Query: 286 LIEGLCLSGNVDEAKRMMSKMRLKG-IKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
I+GLC +G +D A+++ +M + N+ T +L G R EEA +E+ R
Sbjct: 463 FIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR 522
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA 404
G++ Y+ +++ C G P A+ ++ +M+ P + N + + K E A
Sbjct: 523 GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Query: 405 VLLLK--NMPRMGCSPNFLSYSIVICGLCKVKGR---MQLVEELVSSMLQSGHNLDATMY 459
+L + R P+ +SY+ VI GLC+ R + L+E ++S+ + + +
Sbjct: 583 AQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Query: 460 NCLL 463
NC +
Sbjct: 643 NCFI 646
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 162/335 (48%), Gaps = 6/335 (1%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR 204
NA++ L + + A + ++V++ + P+V +Y+T+I C G +E A +M
Sbjct: 250 NALINGLCKEHDYKGAFELMREMVEKG-ISPNVISYSTLINVLCNSGQIELAFSFLTQML 308
Query: 205 ---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
C PN T ++++ G +G A+ ++N+ +P+VV + TL+ G+ G +
Sbjct: 309 KRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNI 368
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
+A++ M+E GC PN+ TY +LI G G++D A + +KM G NV T+M
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNM 428
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK-R 380
++ C + +EA ++ M V ++ + C G+ A + R+M + R
Sbjct: 429 VEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHR 488
Query: 381 MKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLV 440
P++ ++N + L ++EEA L + + G + +Y+ ++ G C G +
Sbjct: 489 CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA-GLPGIA 547
Query: 441 EELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMA 475
+LV M+ G + D N ++ YC+ G E A
Sbjct: 548 LQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 144/304 (47%), Gaps = 21/304 (6%)
Query: 67 QPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRG 126
QPN Y+ + + +++ + S+FS + + N + IN F RG + G
Sbjct: 349 QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT---YGSLINGFAKRGSLDG 405
Query: 127 AIHWFHKAKASGPC--ALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMI 184
A++ ++K SG C + ++ L R ++ A+++ + + KE P V T+ I
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCA-PSVPTFNAFI 464
Query: 185 RGFCKMGMVESARKVFDEM----RCEPNAITYNTMIHGLCKKGEMDGAM----RVFNRFA 236
+G C G ++ A KVF +M RC PN +TYN ++ GL K ++ A +F R
Sbjct: 465 KGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGV 524
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNV 296
E S T+ TL+ G G AL + +M G P+ +T N +I C G
Sbjct: 525 EWSSS-----TYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKA 579
Query: 297 DEAKRMMSKMRL--KGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYS 354
+ A +M+ + + + +V + T+++ G C E+ + ++ M+S G+ + +S
Sbjct: 580 ERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWS 639
Query: 355 VIVN 358
V++N
Sbjct: 640 VLIN 643
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 127/268 (47%), Gaps = 24/268 (8%)
Query: 258 RGEVQEALNCMKEMQEQGCQP-----------------NVVTYNALIEGLCLSGNVDEAK 300
E++E L+ +K ++++ C P +T+ +I L + G VD +
Sbjct: 38 HAEIKE-LDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQ 96
Query: 301 RMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEY 360
++ +M+L+G + S++ + VG +E A++ + G D VK Y+ +++
Sbjct: 97 YLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTL 156
Query: 361 CKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNF 420
+ + R+M +P+V ++N + + L K++ A LL M GC P+
Sbjct: 157 LGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDA 216
Query: 421 LSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVY 480
+SY+ VI +C+V LV+E L ++YN L+ G C++ D + A + +
Sbjct: 217 VSYTTVISSMCEVG----LVKE--GRELAERFEPVVSVYNALINGLCKEHDYKGAFELMR 270
Query: 481 DMIDKSFLFNKDTYCTFVKELCAKGKVK 508
+M++K N +Y T + LC G+++
Sbjct: 271 EMVEKGISPNVISYSTLINVLCNSGQIE 298
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 193/395 (48%), Gaps = 25/395 (6%)
Query: 127 AIHWFHKAKASGP--CALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMI 184
AI +F S P A+ CN V+GV VR NR ++A ++Y ++ + + +++++ +I
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKM-EIRRIPLNIYSFNILI 148
Query: 185 RGFC---KMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESK-- 239
+ FC K+ S ++ +P+ +T+NT++HGLC + + A+ +F E+
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 240 ------------SCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
P V+TF TLI+G G V EA + +M +G +VVTY ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMD 347
G+C G+ A ++SKM IK +V ++++ C G +A EM+ +G+
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
+V Y+ +++ +C G+ S+A +LR+M+ + + P V +FNA+ V E KL EA L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 408 LKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
M P+ ++Y+ +I G CK R + + M D +N ++ YC
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCK-HNRFDDAKHMFDLMASP----DVVTFNTIIDVYC 443
Query: 468 EDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELC 502
+ ++ + ++ + + N TY T + C
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC 478
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 186/400 (46%), Gaps = 47/400 (11%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
+N GD + A++ K + + P + +A++ L + + A+ ++ +++++
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG- 326
Query: 173 VEPDVFTYTTMIRGFCKMG-----------MVE------------------------SAR 197
+ P+VFTY MI GFC G M+E A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 198 KVFDEM--RC-EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDG 254
K+ DEM RC P+ +TYN+MI+G CK D A +F+ A PDVVTF T+ID
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-----PDVVTFNTIIDV 441
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
Y + V E + ++E+ +G N TYN LI G C N++ A+ + +M G+ +
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
T +L GFC + EEA++ + + +DLD AY++I++ CK K EA +
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
+ ++P V ++N + + + +A +L M G P+ +Y+ +I G C
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG-CLKA 620
Query: 435 GRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEM 474
G + EL+S M +G + DA C DEE+
Sbjct: 621 GEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEI 660
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 149/348 (42%), Gaps = 61/348 (17%)
Query: 193 VESARKVFDEM-RCEP--NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
++ A FD M R P A+ N +I + D A+ ++ R E + ++ +F
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLY-RKMEIRRIPLNIYSFN 145
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
LI + ++ +L+ ++ + G QP+VVT+N L+ GLCL + EA + M
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 310 GIKDNVA---------------TNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYS 354
G + VA T +++ G C+ GR EA + +MV +G+ +DV Y
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 355 VIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRM 414
IVN CK+G A+++L +M +KP V
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDV----------------------------- 296
Query: 415 GCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEM 474
+ YS +I LCK G + L S ML+ G + YNC++ G+C G
Sbjct: 297 ------VIYSAIIDRLCK-DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 475 ALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE------EYLKRCV 516
A + + DMI++ + T+ + +GK+ E E L RC+
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 397
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 124/254 (48%), Gaps = 13/254 (5%)
Query: 137 SGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESA 196
+ P ++ N ++ V RA RV+ + ++ + LV + TY T+I GFC++ + +A
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV-ANTTTYNTLIHGFCEVDNLNAA 486
Query: 197 RKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLID 253
+ +F EM P+ IT N +++G C+ +++ A+ +F SK D V + +I
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK-IDLDTVAYNIIIH 545
Query: 254 GYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKD 313
G K +V EA + + G +P+V TYN +I G C + +A + KM+ G +
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 314 NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL 373
+ +T ++++G G +++I+ + EM S G D + C++
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSD-------- 657
Query: 374 REMVAKRMKPSVSS 387
E++ ++P ++
Sbjct: 658 EEIIENYLRPKING 671
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/441 (29%), Positives = 208/441 (47%), Gaps = 49/441 (11%)
Query: 77 RSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKA 136
R AI D + S SL D +RR K+SD L + F R A+ F
Sbjct: 165 RDSRVAIADAMASLSL--CFDEEIRR--KMSDLLIEVYCTQF-KRDGCYLALDVFPVLAN 219
Query: 137 SG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVE 194
G P +CN +L LVRAN +D V K V PDV+ +TT I FCK G VE
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKG--VSPDVYLFTTAINAFCKGGKVE 277
Query: 195 SARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTL 251
A K+F +M PN +T+NT+I GL G D A + E + P ++T++ L
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE-RGMEPTLITYSIL 336
Query: 252 IDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
+ G ++ + +A +KEM ++G PNV+ YN LI+ +G++++A + M KG+
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 312 KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVS 371
+T +++KG+C G+++ A + +KEM+S G +++ +++ ++ C
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC---------- 446
Query: 372 ILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLC 431
S F++ R V E +LL+NM SP + +I GLC
Sbjct: 447 ------------SHLMFDSALR-FVGE-------MLLRNM-----SPGGGLLTTLISGLC 481
Query: 432 KVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNK 491
K G+ EL L G +D N LL G CE G + A + +++ + + ++
Sbjct: 482 K-HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 492 DTYCTFVKELCAKGKVKEEYL 512
+Y T + C K K+ E ++
Sbjct: 541 VSYNTLISGCCGKKKLDEAFM 561
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 198/444 (44%), Gaps = 43/444 (9%)
Query: 109 FLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQ 166
+L + INAF G + A+ F K + +G P ++ N V+ L R + A ++
Sbjct: 261 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 167 VVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKG 223
+V+ + EP + TY+ +++G + + A V EM + PN I YN +I + G
Sbjct: 321 MVERGM-EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 379
Query: 224 EMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTY 283
++ A+ + + SK T+ TLI GY K G+ A +KEM G N ++
Sbjct: 380 SLNKAIEIKDLMV-SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 284 NA-----------------------------------LIEGLCLSGNVDEAKRMMSKMRL 308
+ LI GLC G +A + +
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 309 KGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSE 368
KG + T+ ++L G C G+ +EA + KE++ RG +D +Y+ +++ C K E
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Query: 369 AVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVIC 428
A L EMV + +KP +++ + L K+EEA+ + R G P+ +YS++I
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 429 GLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFL 488
G CK + R + +E M+ + +YN L+ YC G MAL+ DM K
Sbjct: 619 GCCKAE-RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 489 FNKDTYCTFVKELCAKGKVKEEYL 512
N TY + +K + +V+E L
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKL 701
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 172/334 (51%), Gaps = 5/334 (1%)
Query: 181 TTMIRGFCKMGMVESARKVFDEMRCEPNAI---TYNTMIHGLCKKGEMDGAMRVFNRFAE 237
TT+I G CK G A +++ + + + T N ++HGLC+ G++D A R+
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL- 532
Query: 238 SKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVD 297
+ C D V++ TLI G + ++ EA + EM ++G +P+ TY+ LI GL V+
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 298 EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIV 357
EA + + G+ +V T + M+ G C R+EE + EM+S+ + + Y+ ++
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 358 NEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCS 417
YC+ G+ S A+ + +M K + P+ +++ ++ + + ++EEA LL + M G
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712
Query: 418 PNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALK 477
PN Y+ +I G K+ G+M VE L+ M + + Y ++GGY DG+ A +
Sbjct: 713 PNVFHYTALIDGYGKL-GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 478 TVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
+ +M +K + + TY F+ +G V E +
Sbjct: 772 LLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 184/379 (48%), Gaps = 26/379 (6%)
Query: 147 VLGVLVRANRVNLAKAI------YDQVVKEALVEPDVFTYTTMI-RGFCKMGM----VES 195
VL +R +RV +A A+ +D+ ++ + + + Y T R C + + V +
Sbjct: 159 VLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLA 218
Query: 196 ARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+ +F P+ T N ++ L + E F+ K PDV FTT I+ +
Sbjct: 219 NKGMF------PSKTTCNILLTSLVRANEFQKCCEAFD--VVCKGVSPDVYLFTTAINAF 270
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G+V+EA+ +M+E G PNVVT+N +I+GL + G DEA KM +G++ +
Sbjct: 271 CKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL 330
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T + ++KG R +A +KEM +G +V Y+ +++ + + G ++A+ I
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 390
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCK--- 432
MV+K + + S++N + + + + A LLK M +G + N S++ VIC LC
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 450
Query: 433 VKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKD 492
++ V E++ + G L T L+ G C+ G AL+ + ++K F+ +
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTT----LISGLCKHGKHSKALELWFQFLNKGFVVDTR 506
Query: 493 TYCTFVKELCAKGKVKEEY 511
T + LC GK+ E +
Sbjct: 507 TSNALLHGLCEAGKLDEAF 525
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 175/368 (47%), Gaps = 11/368 (2%)
Query: 80 YAAITDVLLSHSLFSTA----DSLLRRSNKLSDFLASKFINAFGDRGDIRGAIH-WFH-K 133
+ ++ +L SH +F +A +L R+ L + I+ G A+ WF
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 134 AKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMV 193
K + NA+L L A +++ A I +++ V D +Y T+I G C +
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV-MDRVSYNTLISGCCGKKKL 556
Query: 194 ESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTT 250
+ A DEM +P+ TY+ +I GL +++ A++ ++ + PDV T++
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD-CKRNGMLPDVYTYSV 615
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG 310
+IDG K +E EM + QPN V YN LI C SG + A + M+ KG
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 311 IKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAV 370
I N AT TS++KG ++ R EEA +EM G++ +V Y+ +++ Y K+G+ +
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 371 SILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGL 430
+LREM +K + P+ ++ + + + EA LL M G P+ ++Y I G
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795
Query: 431 CKVKGRMQ 438
K G ++
Sbjct: 796 LKQGGVLE 803
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 5/222 (2%)
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEP 207
L N+V A +D + ++ PDV+TY+ MI G CK E ++ FDEM +P
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGML-PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
N + YN +I C+ G + A+ + + K P+ T+T+LI G S V+EA
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALEL-REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM 327
+EM+ +G +PNV Y ALI+G G + + + ++ +M K + N T T M+ G+
Sbjct: 703 FEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762
Query: 328 VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
G EA + + EM +G+ D Y + Y K G EA
Sbjct: 763 DGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 124/253 (49%), Gaps = 7/253 (2%)
Query: 93 FSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGV 150
F D +++R K ++ S I + + AI ++ K +G P + + ++
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEP 207
+A R + +D+++ + V+P+ Y +IR +C+ G + A ++ ++M+ P
Sbjct: 620 CCKAERTEEGQEFFDEMMSKN-VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
N+ TY ++I G+ ++ A +F + P+V +T LIDGY K G++ +
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM 327
++EM + PN +TY +I G GNV EA R++++MR KGI + T + G+
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Query: 328 VGRSEEAIKHMKE 340
G EA K E
Sbjct: 798 QGGVLEAFKGSDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/441 (29%), Positives = 208/441 (47%), Gaps = 49/441 (11%)
Query: 77 RSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKA 136
R AI D + S SL D +RR K+SD L + F R A+ F
Sbjct: 165 RDSRVAIADAMASLSL--CFDEEIRR--KMSDLLIEVYCTQF-KRDGCYLALDVFPVLAN 219
Query: 137 SG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVE 194
G P +CN +L LVRAN +D V K V PDV+ +TT I FCK G VE
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKG--VSPDVYLFTTAINAFCKGGKVE 277
Query: 195 SARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTL 251
A K+F +M PN +T+NT+I GL G D A + E + P ++T++ L
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE-RGMEPTLITYSIL 336
Query: 252 IDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
+ G ++ + +A +KEM ++G PNV+ YN LI+ +G++++A + M KG+
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 312 KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVS 371
+T +++KG+C G+++ A + +KEM+S G +++ +++ ++ C
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC---------- 446
Query: 372 ILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLC 431
S F++ R V E +LL+NM SP + +I GLC
Sbjct: 447 ------------SHLMFDSALR-FVGE-------MLLRNM-----SPGGGLLTTLISGLC 481
Query: 432 KVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNK 491
K G+ EL L G +D N LL G CE G + A + +++ + + ++
Sbjct: 482 K-HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 492 DTYCTFVKELCAKGKVKEEYL 512
+Y T + C K K+ E ++
Sbjct: 541 VSYNTLISGCCGKKKLDEAFM 561
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 198/444 (44%), Gaps = 43/444 (9%)
Query: 109 FLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQ 166
+L + INAF G + A+ F K + +G P ++ N V+ L R + A ++
Sbjct: 261 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 167 VVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKG 223
+V+ + EP + TY+ +++G + + A V EM + PN I YN +I + G
Sbjct: 321 MVERGM-EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 379
Query: 224 EMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTY 283
++ A+ + + SK T+ TLI GY K G+ A +KEM G N ++
Sbjct: 380 SLNKAIEIKDLMV-SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 284 NA-----------------------------------LIEGLCLSGNVDEAKRMMSKMRL 308
+ LI GLC G +A + +
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 309 KGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSE 368
KG + T+ ++L G C G+ +EA + KE++ RG +D +Y+ +++ C K E
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Query: 369 AVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVIC 428
A L EMV + +KP +++ + L K+EEA+ + R G P+ +YS++I
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 429 GLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFL 488
G CK + R + +E M+ + +YN L+ YC G MAL+ DM K
Sbjct: 619 GCCKAE-RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 489 FNKDTYCTFVKELCAKGKVKEEYL 512
N TY + +K + +V+E L
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKL 701
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 172/334 (51%), Gaps = 5/334 (1%)
Query: 181 TTMIRGFCKMGMVESARKVFDEMRCEPNAI---TYNTMIHGLCKKGEMDGAMRVFNRFAE 237
TT+I G CK G A +++ + + + T N ++HGLC+ G++D A R+
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL- 532
Query: 238 SKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVD 297
+ C D V++ TLI G + ++ EA + EM ++G +P+ TY+ LI GL V+
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 298 EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIV 357
EA + + G+ +V T + M+ G C R+EE + EM+S+ + + Y+ ++
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 358 NEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCS 417
YC+ G+ S A+ + +M K + P+ +++ ++ + + ++EEA LL + M G
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712
Query: 418 PNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALK 477
PN Y+ +I G K+ G+M VE L+ M + + Y ++GGY DG+ A +
Sbjct: 713 PNVFHYTALIDGYGKL-GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 478 TVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
+ +M +K + + TY F+ +G V E +
Sbjct: 772 LLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 184/379 (48%), Gaps = 26/379 (6%)
Query: 147 VLGVLVRANRVNLAKAI------YDQVVKEALVEPDVFTYTTMI-RGFCKMGM----VES 195
VL +R +RV +A A+ +D+ ++ + + + Y T R C + + V +
Sbjct: 159 VLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLA 218
Query: 196 ARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+ +F P+ T N ++ L + E F+ K PDV FTT I+ +
Sbjct: 219 NKGMF------PSKTTCNILLTSLVRANEFQKCCEAFD--VVCKGVSPDVYLFTTAINAF 270
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G+V+EA+ +M+E G PNVVT+N +I+GL + G DEA KM +G++ +
Sbjct: 271 CKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL 330
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T + ++KG R +A +KEM +G +V Y+ +++ + + G ++A+ I
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 390
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCK--- 432
MV+K + + S++N + + + + A LLK M +G + N S++ VIC LC
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 450
Query: 433 VKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKD 492
++ V E++ + G L T L+ G C+ G AL+ + ++K F+ +
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTT----LISGLCKHGKHSKALELWFQFLNKGFVVDTR 506
Query: 493 TYCTFVKELCAKGKVKEEY 511
T + LC GK+ E +
Sbjct: 507 TSNALLHGLCEAGKLDEAF 525
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 175/368 (47%), Gaps = 11/368 (2%)
Query: 80 YAAITDVLLSHSLFSTA----DSLLRRSNKLSDFLASKFINAFGDRGDIRGAIH-WFH-K 133
+ ++ +L SH +F +A +L R+ L + I+ G A+ WF
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 134 AKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMV 193
K + NA+L L A +++ A I +++ V D +Y T+I G C +
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV-MDRVSYNTLISGCCGKKKL 556
Query: 194 ESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTT 250
+ A DEM +P+ TY+ +I GL +++ A++ ++ + PDV T++
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD-CKRNGMLPDVYTYSV 615
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG 310
+IDG K +E EM + QPN V YN LI C SG + A + M+ KG
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 311 IKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAV 370
I N AT TS++KG ++ R EEA +EM G++ +V Y+ +++ Y K+G+ +
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 371 SILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGL 430
+LREM +K + P+ ++ + + + EA LL M G P+ ++Y I G
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795
Query: 431 CKVKGRMQ 438
K G ++
Sbjct: 796 LKQGGVLE 803
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 5/222 (2%)
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEP 207
L N+V A +D + ++ PDV+TY+ MI G CK E ++ FDEM +P
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGML-PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
N + YN +I C+ G + A+ + + K P+ T+T+LI G S V+EA
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALEL-REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM 327
+EM+ +G +PNV Y ALI+G G + + + ++ +M K + N T T M+ G+
Sbjct: 703 FEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762
Query: 328 VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
G EA + + EM +G+ D Y + Y K G EA
Sbjct: 763 DGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 124/253 (49%), Gaps = 7/253 (2%)
Query: 93 FSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGV 150
F D +++R K ++ S I + + AI ++ K +G P + + ++
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEP 207
+A R + +D+++ + V+P+ Y +IR +C+ G + A ++ ++M+ P
Sbjct: 620 CCKAERTEEGQEFFDEMMSKN-VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
N+ TY ++I G+ ++ A +F + P+V +T LIDGY K G++ +
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM 327
++EM + PN +TY +I G GNV EA R++++MR KGI + T + G+
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Query: 328 VGRSEEAIKHMKE 340
G EA K E
Sbjct: 798 QGGVLEAFKGSDE 810
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 172/310 (55%), Gaps = 6/310 (1%)
Query: 202 EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
E C P+ +T+ T+++GLC +G + A+ + +R E +P + T+I+G K G+
Sbjct: 3 ETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH-QP----YGTIINGLCKMGDT 57
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
+ ALN + +M+E + +VV YNA+I+ LC G+ A+ + ++M KGI +V T + M
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
+ FC GR +A + +++M+ R ++ DV +S ++N K GK SEA I +M+ + +
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 382 KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVE 441
P+ ++N++ + +L +A +L +M CSP+ +++S +I G CK K R+
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAK-RVDNGM 236
Query: 442 ELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKEL 501
E+ M + G + Y L+ G+C+ GD + A + MI N T+ + + L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 502 CAKGKVKEEY 511
C+K ++++ +
Sbjct: 297 CSKKELRKAF 306
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 160/323 (49%), Gaps = 15/323 (4%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ ++ L RV A A+ D++V+E +P Y T+I G CKMG ESA
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH-QP----YGTIINGLCKMGDTESALN 62
Query: 199 VF---DEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+ +E + + + YN +I LCK G A +F + K PDV+T++ +ID +
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHD-KGIFPDVITYSGMIDSF 121
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+ G +A +++M E+ P+VVT++ALI L G V EA+ + M +GI
Sbjct: 122 CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T SM+ GFC R +A + + M S+ DV +S ++N YCK + + I E
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLC---K 432
M + + + ++ + L+ A LL M G +PN++++ ++ LC +
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKE 301
Query: 433 VKGRMQLVEELVSSMLQSGHNLD 455
++ ++E+L S GH+L+
Sbjct: 302 LRKAFAILEDLQKS---EGHHLE 321
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 126/268 (47%), Gaps = 32/268 (11%)
Query: 271 MQEQGCQPNVVT-------------------------------YNALIEGLCLSGNVDEA 299
M E GC+P+VVT Y +I GLC G+ + A
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60
Query: 300 KRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNE 359
++SKM IK +V +++ C G A EM +G+ DV YS +++
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 360 YCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPN 419
+C+ G+ ++A +LR+M+ +++ P V +F+A+ LV E K+ EA + +M R G P
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 420 FLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTV 479
++Y+ +I G CK + R+ + ++ SM + D ++ L+ GYC+ + ++
Sbjct: 181 TITYNSMIDGFCK-QDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIF 239
Query: 480 YDMIDKSFLFNKDTYCTFVKELCAKGKV 507
+M + + N TY T + C G +
Sbjct: 240 CEMHRRGIVANTVTYTTLIHGFCQVGDL 267
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 172/342 (50%), Gaps = 6/342 (1%)
Query: 125 RGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMI 184
R F K P + N ++G L+ A+ + +A+ ++ QV + PDV TY ++
Sbjct: 769 RTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI-PDVATYNFLL 827
Query: 185 RGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSC 241
+ K G ++ +++ EM CE N IT+N +I GL K G +D A+ ++ +
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKR 301
P T+ LIDG SK G + EA + M + GC+PN YN LI G +G D A
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 302 MMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYC 361
+ +M +G++ ++ T + ++ CMVGR +E + + KE+ G++ DV Y++I+N
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLG 1007
Query: 362 KIGKPSEAVSILREMVAKR-MKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNF 420
K + EA+ + EM R + P + ++N++ L +EEA + + R G PN
Sbjct: 1008 KSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067
Query: 421 LSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCL 462
+++ +I G + G+ + + +M+ G + + Y L
Sbjct: 1068 FTFNALIRGY-SLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 194/401 (48%), Gaps = 12/401 (2%)
Query: 103 SNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVR----ANRVN 158
+++ ++ I + I A+ + + A+G C +++L ++R N V+
Sbjct: 708 ADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICR-DGDSILVPIIRYSCKHNNVS 766
Query: 159 LAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTM 215
A+ ++++ K+ V+P + TY +I G + M+E A+ VF +++ C P+ TYN +
Sbjct: 767 GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFL 826
Query: 216 IHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKE-MQEQ 274
+ K G++D ++ + + C + +T +I G K G V +AL+ + M ++
Sbjct: 827 LDAYGKSGKIDELFELYKEMS-THECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 275 GCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEA 334
P TY LI+GL SG + EAK++ M G + N A ++ GF G ++ A
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 335 IKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRV 394
K MV G+ D+K YSV+V+ C +G+ E + +E+ + P V +N +
Sbjct: 946 CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING 1005
Query: 395 LVAERKLEEAVLLLKNM-PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHN 453
L +LEEA++L M G +P+ +Y+ +I L + G ++ ++ + + ++G
Sbjct: 1006 LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL-GIAGMVEEAGKIYNEIQRAGLE 1064
Query: 454 LDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTY 494
+ +N L+ GY G E A M+ F N TY
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 163/319 (51%), Gaps = 6/319 (1%)
Query: 161 KAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIH 217
K + ++ K+ V PDV T+T ++ CK G A D MR + PN TYNT+I
Sbjct: 348 KQFWSEMEKDGHV-PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 406
Query: 218 GLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQ 277
GL + +D A+ +F ES +P T+ ID Y K G+ AL ++M+ +G
Sbjct: 407 GLLRVHRLDDALELFGNM-ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 465
Query: 278 PNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKH 337
PN+V NA + L +G EAK++ ++ G+ + T M+K + VG +EAIK
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 338 MKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVA 397
+ EM+ G + DV + ++N K + EA + M ++KP+V ++N + L
Sbjct: 526 LSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 585
Query: 398 ERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDAT 457
K++EA+ L + M + GC PN ++++ + LCK + L +++ M+ G D
Sbjct: 586 NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK-NDEVTLALKMLFKMMDMGCVPDVF 644
Query: 458 MYNCLLGGYCEDGDEEMAL 476
YN ++ G ++G + A+
Sbjct: 645 TYNTIIFGLVKNGQVKEAM 663
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 186/399 (46%), Gaps = 45/399 (11%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
FI+ +G GD A+ F K K G P ++CNA L L +A R AK I+ +
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGA 228
LV PD TY M++ + K+G ++ A K+ EM CEP+ I N++I+ L K +D A
Sbjct: 499 LV-PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
++F R E K +P VVT+ TL+ G K G++QEA+ + M ++GC PN +T+N L +
Sbjct: 558 WKMFMRMKEMK-LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAI---KHMKEMVSRG 345
LC + V A +M+ KM G +V T +++ G G+ +EA+ MK++V
Sbjct: 617 CLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPD 676
Query: 346 M-------------DLDVKAYSVIVN-EYCKIGKPS------------------EAVSIL 373
L AY +I N Y +P+ AVS
Sbjct: 677 FVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFS 736
Query: 374 REMVAKRM-KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPR-MGCSPNFLSYSIVICGLC 431
+VA + + S + R + A L + + +G P +Y+++I GL
Sbjct: 737 ERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLL 796
Query: 432 KVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDG 470
+ +++ +++ + +G D YN LL Y + G
Sbjct: 797 EAD-MIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSG 834
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 166/340 (48%), Gaps = 5/340 (1%)
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVF---DEMRCEPNAITYNTMIHGLCKKGEMDGAM 229
++P+V+T+T IR + G + A ++ D+ C P+ +TY +I LC ++D A
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK 313
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
VF + + +PD VT+ TL+D +S ++ EM++ G P+VVT+ L++
Sbjct: 314 EVFEKMKTGRH-KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
LC +GN EA + MR +GI N+ T +++ G V R ++A++ M S G+
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
Y V ++ Y K G A+ +M K + P++ + NA L + EA +
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 492
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
+ +G P+ ++Y++++ KV G + +L+S M+++G D + N L+ +
Sbjct: 493 GLKDIGLVPDSVTYNMMMKCYSKV-GEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ A K M + TY T + L GK++E
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 130/256 (50%), Gaps = 6/256 (2%)
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVF 232
+ ++Y +I K A +V+ M E P+ TY++++ GL K+ ++D M +
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 233 NRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCL 292
E+ +P+V TFT I + G++ EA +K M ++GC P+VVTY LI+ LC
Sbjct: 247 KEM-ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 305
Query: 293 SGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHM-KEMVSRGMDLDVK 351
+ +D AK + KM+ K + T ++L F R +++K EM G DV
Sbjct: 306 ARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFS-DNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 352 AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
++++V+ CK G EA L M + + P++ ++N + L+ +L++A+ L NM
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 412 PRMGCSPNFLSYSIVI 427
+G P +Y + I
Sbjct: 425 ESLGVKPTAYTYIVFI 440
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 136/287 (47%), Gaps = 44/287 (15%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASGPC---ALSCNAVLGVLVRANRVNLAKAIYDQVVKE 170
++A+G G I + +K ++ C ++ N V+ LV+A V+ A +Y ++ +
Sbjct: 826 LLDAYGKSGKID-ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD 884
Query: 171 ALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDG 227
P TY +I G K G + A+++F+ M C PN YN +I+G K GE D
Sbjct: 885 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADA 944
Query: 228 AMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVV------ 281
A +F R + + RPD+ T++ L+D G V E L+ KE++E G P+VV
Sbjct: 945 ACALFKRMVK-EGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1003
Query: 282 ------------------------------TYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
TYN+LI L ++G V+EA ++ ++++ G+
Sbjct: 1004 NGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1063
Query: 312 KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVN 358
+ NV T ++++G+ + G+ E A + MV+ G + Y + N
Sbjct: 1064 EPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 177/413 (42%), Gaps = 45/413 (10%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + N ++ LV+ +V A + Q+ K LV PD T T++ G K ++E A K
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK--LVYPDFVTLCTLLPGVVKASLIEDAYK 698
Query: 199 VFDEM--RC--EP-------------------NAITYNTMI--HGLCKKGE--------- 224
+ C +P NA++++ + +G+C+ G+
Sbjct: 699 IITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 758
Query: 225 ------MDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQP 278
+ GA +F +F + +P + T+ LI G + ++ A + +++ GC P
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 279 NVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHM 338
+V TYN L++ SG +DE + +M + N T+ ++ G G ++A+
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 339 KEMVS-RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVA 397
+++S R Y +++ K G+ EA + M+ +P+ + +N +
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 398 ERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDAT 457
+ + A L K M + G P+ +YS+++ LC V GR+ + +SG N D
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV-GRVDEGLHYFKELKESGLNPDVV 997
Query: 458 MYNCLLGGYCEDGDEEMALKTVYDM-IDKSFLFNKDTYCTFVKELCAKGKVKE 509
YN ++ G + E AL +M + + TY + + L G V+E
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 150/329 (45%), Gaps = 6/329 (1%)
Query: 174 EPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAI----TYNTMIHGLCKKGEMDGAM 229
+PD+ + + RG +S+ F + N + T N M+ L G+++
Sbjct: 79 KPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMA 138
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
VF+ + + + D T+ T+ S +G +++A +++M+E G N +YN LI
Sbjct: 139 YVFD-LMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHL 197
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
L S EA + +M L+G + ++ T +S++ G + + +KEM + G+ +
Sbjct: 198 LLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPN 257
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
V +++ + + GK +EA IL+ M + P V ++ + L RKL+ A + +
Sbjct: 258 VYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFE 317
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
M P+ ++Y I + + V++ S M + GH D + L+ C+
Sbjct: 318 KMKTGRHKPDRVTY-ITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKA 376
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
G+ A T+ M D+ L N TY T +
Sbjct: 377 GNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 129/505 (25%), Positives = 220/505 (43%), Gaps = 78/505 (15%)
Query: 35 SCYLTPSLVTQVIKNTH------NPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLL 88
S L ++ TQVI P + FF W + P++ +S + I +L
Sbjct: 36 SGLLKSAITTQVISELSLFSGYGGPSLSWSFFIWTDSL---PSSKHSLQSSWKMIL-ILT 91
Query: 89 SHSLFSTADSLLRRSNKLSDFLASKFI------NAFGDRGDIRGAIHW------------ 130
H F TA LL + + + L+S + D D+ W
Sbjct: 92 KHKHFKTAHQLLDKLAQ-RELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMIN 150
Query: 131 -----FHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVK-------------- 169
F + ++ G P +C +L LV+ + I+ ++VK
Sbjct: 151 DSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLV 210
Query: 170 --------------------EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CE 206
E V PD+FTY T+I +CK M A V D M
Sbjct: 211 HACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVA 270
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALN 266
PN +TYN+ IHG ++G M A R+F + + VT+TTLIDGY + ++ EAL
Sbjct: 271 PNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANH--VTYTTLIDGYCRMNDIDEALR 328
Query: 267 CMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIK-DNVATNTSMLKGF 325
+ M+ +G P VVTYN+++ LC G + EA R++++M K I+ DN+ NT ++ +
Sbjct: 329 LREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT-LINAY 387
Query: 326 CMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSV 385
C + A+K K+M+ G+ LD+ +Y +++ +CK+ + A L M+ K P
Sbjct: 388 CKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGY 447
Query: 386 SSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVS 445
++++ + + K +E LL+ + G + Y +I +CK++ ++ + L
Sbjct: 448 ATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLE-QVDYAKVLFE 506
Query: 446 SMLQSGHNLDATMYNCLLGGYCEDG 470
SM + G D+ ++ + Y G
Sbjct: 507 SMEKKGLVGDSVIFTTMAYAYWRTG 531
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 172/359 (47%), Gaps = 24/359 (6%)
Query: 177 VFTYTTMIRGFCKMGMVESARKVFDEMRC---EPNAITYNTMIHGLCKKGEMDGAMRVFN 233
VF++ + + K GM+ + VF+++R +P+ +++ L K+ D ++F
Sbjct: 135 VFSWLMIY--YAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFK 192
Query: 234 RFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
+ + ++ + L+ SK G+ ++A + EM+E+G P++ TYN LI C
Sbjct: 193 KMVKL-GVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKK 251
Query: 294 GNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKA- 352
EA + +M G+ N+ T S + GF GR EA + +E+ DV A
Sbjct: 252 SMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-----DVTAN 306
Query: 353 ---YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
Y+ +++ YC++ EA+ + M ++ P V ++N++ R L + ++ EA LL
Sbjct: 307 HVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLT 366
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
M P+ ++ + +I CK++ + V ++ M++SG LD Y L+ G+C+
Sbjct: 367 EMSGKKIEPDNITCNTLINAYCKIEDMVSAV-KVKKKMIESGLKLDMYSYKALIHGFCKV 425
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKG------KVKEEYLKR--CVDNTL 520
+ E A + ++ MI+K F TY V + K+ EE+ KR C D L
Sbjct: 426 LELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVAL 484
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 138/282 (48%), Gaps = 6/282 (2%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASGPC-ALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
FI+ F G +R A F + K ++ ++ R N ++ A + +V++
Sbjct: 279 FIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRL-REVMESRG 337
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAM 229
P V TY +++R C+ G + A ++ EM + EP+ IT NT+I+ CK +M A+
Sbjct: 338 FSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAV 397
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
+V + ES + D+ ++ LI G+ K E++ A + M E+G P TY+ L++G
Sbjct: 398 KVKKKMIES-GLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDG 456
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
DE +++ + +G+ +VA +++ C + + + A + M +G+ D
Sbjct: 457 FYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGD 516
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAV 391
++ + Y + GK +EA ++ M +R+ ++ + ++
Sbjct: 517 SVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSI 558
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 27/264 (10%)
Query: 133 KAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGM 192
+++ P ++ N++L L R+ A + ++ + +EPD T T+I +CK+
Sbjct: 334 ESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKK-IEPDNITCNTLINAYCKIED 392
Query: 193 VESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
+ SA KV +M + + +Y +IHG CK E++ A E K P T++
Sbjct: 393 MVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIE-KGFSPGYATYS 451
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
L+DG+ + + E ++E +++G +V Y LI +C VD AK + M K
Sbjct: 452 WLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKK 511
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVI------------- 356
G+ + T+M + G+ EA M +R + +++K Y I
Sbjct: 512 GLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDVLRF 571
Query: 357 ----VNEYCKIGKPSEAVSILREM 376
V + C I K SILREM
Sbjct: 572 FWSHVGDRCLISK-----SILREM 590
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 190/395 (48%), Gaps = 8/395 (2%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
I F D G I+ A W G P +C +L L VN A + +++
Sbjct: 225 IGCFRD-GKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGF 283
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAM 229
+P++ +T++I G CK G ++ A ++ +EM +PN T+ +I GLCK+G + A
Sbjct: 284 -KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 342
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
R+F + S + +P+V T+T++I GY K ++ A M+EQG PNV TY LI G
Sbjct: 343 RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 402
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
C +G+ A +M+ M +G N+ T + + C R+ EA + + + S G++ D
Sbjct: 403 HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEAD 462
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
Y++++ E CK ++A++ M + + N + ++K++E+ L +
Sbjct: 463 GVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ 522
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
+ +G P +Y+ +I CK +G + L + +M + G D+ Y L+ G C+
Sbjct: 523 LVVSLGLIPTKETYTSMISCYCK-EGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 581
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAK 504
+ A K MID+ + T T E C +
Sbjct: 582 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKR 616
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/497 (25%), Positives = 222/497 (44%), Gaps = 63/497 (12%)
Query: 56 ALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFI 115
AL FF WA + + H Y D LL++ A ++R +
Sbjct: 110 ALCFFYWAVGFE----KFRHFMRLYLVTADSLLANGNLQKAHEVMR-----------CML 154
Query: 116 NAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALV 173
F + G + A+ + G P +++ N VL + V + A+ ++D++ +V
Sbjct: 155 RNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVV 214
Query: 174 EPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMR 230
PD +Y M+ G + G ++ A + M P+ T ++ LC+ G ++ A+
Sbjct: 215 -PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIW 273
Query: 231 VFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGL 290
F + + +P+++ FT+LIDG K+G +++A ++EM G +PNV T+ ALI+GL
Sbjct: 274 YFRKMID-LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 291 CLSGNVDEAKRMMSKM-RLKGIKDNVATNTSMLKGFCM---VGRSEEAIKHMKEMVSRGM 346
C G ++A R+ K+ R K NV T TSM+ G+C + R+E MKE +G+
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE---QGL 389
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
+V Y+ ++N +CK G A ++ M + P++ ++NA L + + EA
Sbjct: 390 FPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYE 449
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCKV--------------------------------- 433
LL G + ++Y+I+I CK
Sbjct: 450 LLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFC 509
Query: 434 -KGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKD 492
+ +M+ E L ++ G Y ++ YC++GD ++ALK ++M + +
Sbjct: 510 RQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSF 569
Query: 493 TYCTFVKELCAKGKVKE 509
TY + + LC K V E
Sbjct: 570 TYGSLISGLCKKSMVDE 586
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 2/276 (0%)
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNV 296
+++ P +T +++ + G ++ A N EM +G P+ +Y ++ G G +
Sbjct: 174 QNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKI 233
Query: 297 DEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVI 356
EA R ++ M +G + AT T +L C G AI + ++M+ G ++ ++ +
Sbjct: 234 QEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSL 293
Query: 357 VNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGC 416
++ CK G +A +L EMV KP+V + A+ L E+A L + R
Sbjct: 294 IDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDT 353
Query: 417 -SPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMA 475
PN +Y+ +I G CK + ++ E L S M + G + Y L+ G+C+ G A
Sbjct: 354 YKPNVHTYTSMIGGYCK-EDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412
Query: 476 LKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
+ + M D+ F+ N TY + LC K + E Y
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 131/262 (50%), Gaps = 2/262 (0%)
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG 310
++ +S+ G + EA+ + +MQ QG P+ +T N ++E G ++ A+ + +M ++G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 311 IKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAV 370
+ + ++ M+ G G+ +EA + + M+ RG D ++I+ C+ G + A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 371 SILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGL 430
R+M+ KP++ +F ++ L + +++A +L+ M R G PN +++ +I GL
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 431 CKVKGRMQLVEELVSSMLQSG-HNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF 489
CK +G + L +++S + + Y ++GGYC++ A M ++
Sbjct: 333 CK-RGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 391
Query: 490 NKDTYCTFVKELCAKGKVKEEY 511
N +TY T + C G Y
Sbjct: 392 NVNTYTTLINGHCKAGSFGRAY 413
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 116/272 (42%), Gaps = 22/272 (8%)
Query: 111 ASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKE 170
A + +N GD G + P + NA + L + +R A + ++
Sbjct: 412 AYELMNLMGDEGFM--------------PNIYTYNAAIDSLCKKSRAPEAYELLNKAFSC 457
Query: 171 ALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDG 227
L E D TYT +I+ CK + A F M E + N +I C++ +M
Sbjct: 458 GL-EADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKE 516
Query: 228 AMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
+ R+F + S P T+T++I Y K G++ AL M+ GC P+ TY +LI
Sbjct: 517 SERLF-QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLI 575
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMD 347
GLC VDEA ++ M +G+ T ++ +C S A+ ++ + +
Sbjct: 576 SGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK--- 632
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
L ++ +V + C K A ++++ K
Sbjct: 633 LWIRTVRTLVRKLCSEKKVGVAALFFQKLLEK 664
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 137/532 (25%), Positives = 249/532 (46%), Gaps = 32/532 (6%)
Query: 9 TVKPSSIVTTITS--LLQTPDSEP---LKKFSCYLTPSLV-TQVIKNTHNPHHALFFFN- 61
T P S++ ITS LL++ S ++ + LTPSLV T ++ P+ A F N
Sbjct: 35 TSTPESVLPPITSEILLESIRSSQWHIVEHVADKLTPSLVSTTLLSLVKTPNLAFNFVNH 94
Query: 62 ---WASNPQPN------PNNYSHPRSCYAAITDVLLS--HSLFSTADSLLRRSNKL---S 107
+ + Q + S P+ + +V+ S +S+ + D L+ ++L S
Sbjct: 95 IDLYRLDFQTQCLAIAVISKLSSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKS 154
Query: 108 DFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYD 165
L + + AI F+ K G P +CN +L +L R NR+ A Y
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214
Query: 166 QVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRC---EPNAITYNTMIHGLCKK 222
+ + ++ +V+T+ MI CK G ++ A+ M +P +TYNT++ G +
Sbjct: 215 DMYRME-IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 223 GEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVT 282
G ++GA + + +SK +PD+ T+ ++ G E L +EM+E G P+ V+
Sbjct: 274 GRIEGARLIISEM-KSKGFQPDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSVS 329
Query: 283 YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
YN LI G +G+++ A +M +G+ T +++ G M + E A ++E+
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIR 389
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLE 402
+G+ LD Y++++N YC+ G +A ++ EM+ ++P+ ++ ++ VL + K
Sbjct: 390 EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTR 449
Query: 403 EAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCL 462
EA L + + G P+ + + ++ G C + G M L+ M N D YNCL
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAI-GNMDRAFSLLKEMDMMSINPDDVTYNCL 508
Query: 463 LGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLKR 514
+ G C +G E A + + +M + + +Y T + KG K ++ R
Sbjct: 509 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVR 560
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 194/396 (48%), Gaps = 34/396 (8%)
Query: 37 YLTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTA 96
+ TPS V+ + +P AL F +W S N+ H + YA++ +L S +
Sbjct: 24 FYTPSHVSSLFSLNLDPQTALSFSDWISRIP----NFKHNVTSYASLVTLLCSQEIPYEV 79
Query: 97 DS----LLRRSNKLSDFLASKFINAF------GDRGDIRGAIHWFHKAKASGPCALSCNA 146
+++ N + D L F+ F GD +I K K + C N
Sbjct: 80 PKITILMIKSCNSVRDAL---FVVDFCRTMRKGDSFEI--------KYKLTPKCY---NN 125
Query: 147 VLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD---EM 203
+L L R V K +Y +++ E LV PD++T+ T++ G+CK+G V A++ +
Sbjct: 126 LLSSLARFGLVEEMKRLYTEML-EDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQA 184
Query: 204 RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQE 263
C+P+ TY + I G C++ E+D A +VF ++ C + V++T LI G + ++ E
Sbjct: 185 GCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQN-GCHRNEVSYTQLIYGLFEAKKIDE 243
Query: 264 ALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLK 323
AL+ + +M++ C PNV TY LI+ LC SG EA + +M GIK + T +++
Sbjct: 244 ALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQ 303
Query: 324 GFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKP 383
FC +EA ++ M+ G+ +V Y+ ++ +CK +A+ +L +M+ + + P
Sbjct: 304 SFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVP 362
Query: 384 SVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPN 419
+ ++N + + L+ A LL M G PN
Sbjct: 363 DLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 139/282 (49%), Gaps = 3/282 (1%)
Query: 212 YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM 271
YN ++ L + G ++ R++ E PD+ TF TL++GY K G V EA + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDL-VSPDIYTFNTLVNGYCKLGYVVEAKQYVTWL 181
Query: 272 QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRS 331
+ GC P+ TY + I G C VD A ++ +M G N + T ++ G +
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 332 EEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAV 391
+EA+ + +M +V+ Y+V+++ C G+ SEA+++ ++M +KP + +
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 392 FRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSG 451
+ + L+EA LL++M G PN ++Y+ +I G C K + L+S ML+
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC--KKNVHKAMGLLSKMLEQN 359
Query: 452 HNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDT 493
D YN L+ G C G+ + A + + M + + N+ T
Sbjct: 360 LVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
Query: 283 YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
YN L+ L G V+E KR+ ++M + ++ T +++ G+C +G EA +++ ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLE 402
G D D Y+ + +C+ + A + +EM + S+ + L +K++
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 403 EAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCL 462
EA+ LL M C PN +Y+++I LC G+ L M +SG D MY L
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCG-SGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 463 LGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAK 504
+ +C + A + M++ + N TY +K C K
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK 343
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 96/232 (41%), Gaps = 13/232 (5%)
Query: 279 NVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKD-NVATNTSMLKGFCMVGRSEEAIKH 337
NV +Y +L+ LC E + K+ + IK N + + FC R ++ +
Sbjct: 59 NVTSYASLVTLLC----SQEIPYEVPKITILMIKSCNSVRDALFVVDFCRTMRKGDSFEI 114
Query: 338 MKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVA 397
++ K Y+ +++ + G E + EM+ + P + +FN +
Sbjct: 115 KYKLTP-------KCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCK 167
Query: 398 ERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDAT 457
+ EA + + + GC P++ +Y+ I G C+ K + ++ M Q+G + +
Sbjct: 168 LGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRK-EVDAAFKVFKEMTQNGCHRNEV 226
Query: 458 MYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
Y L+ G E + AL + M D + N TY + LC G+ E
Sbjct: 227 SYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSE 278
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 224/487 (45%), Gaps = 44/487 (9%)
Query: 27 DSEPLKKFSCYLTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDV 86
++ P KF ++ ++K +P L FN AS + ++H + Y+ + D
Sbjct: 46 ETNPKTKF---ISHESAVSLMKRERDPQGVLDIFNKASQQK----GFNHNNATYSVLLDN 98
Query: 87 LLSHSLFSTADSLLRRSN-KLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCN 145
L+ H F D++L + + F S F+N R R +H +
Sbjct: 99 LVRHKKFLAVDAILHQMKYETCRFQESLFLNLM--RHFSRSDLH---------------D 141
Query: 146 AVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVF----D 201
V+ + NL + I A V+P + +T + G V +RK+
Sbjct: 142 KVMEMF------NLIQVI-------ARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKH 188
Query: 202 EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
+ +PN +N ++ CK G+++ A V S P+ +T++TL+D
Sbjct: 189 NLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRS 248
Query: 262 QEALNCMKEM-QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTS 320
+EA+ ++M ++G P+ VT+N +I G C +G V+ AK+++ M+ G NV ++
Sbjct: 249 KEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSA 308
Query: 321 MLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKR 380
++ GFC VG+ +EA + E+ G+ LD Y+ ++N +C+ G+ EA+ +L EM A R
Sbjct: 309 LMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR 368
Query: 381 MKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLV 440
+ ++N + R L +E + EEA+ +L G N SY I++ LC G ++
Sbjct: 369 CRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALC-CNGELEKA 427
Query: 441 EELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKE 500
+ +S M + G +N L+ CE G E+ ++ + + + ++ V+
Sbjct: 428 VKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVES 487
Query: 501 LCAKGKV 507
+C + K+
Sbjct: 488 ICKERKL 494
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 126/243 (51%), Gaps = 5/243 (2%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ N ++ RA V AK I D +K+ P+V+ Y+ ++ GFCK+G ++ A++
Sbjct: 266 PDPVTFNVMINGFCRAGEVERAKKILD-FMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQ 324
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
FDE++ + + + Y T+++ C+ GE D AM++ S+ CR D +T+ ++ G
Sbjct: 325 TFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR-CRADTLTYNVILRGL 383
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
S G +EAL + + +G N +Y ++ LC +G +++A + +S M +GI +
Sbjct: 384 SSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHH 443
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
AT ++ C G +E ++ + + G+ K++ +V CK K +L
Sbjct: 444 ATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDS 503
Query: 376 MVA 378
+V+
Sbjct: 504 LVS 506
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 159/354 (44%), Gaps = 9/354 (2%)
Query: 163 IYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE----PNAITYNTMIHG 218
I+++ ++ + TY+ ++ + + + +M+ E ++ N M H
Sbjct: 75 IFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRH- 133
Query: 219 LCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQ-GCQ 277
+ D M +FN +P + +T ++ GEV + + + G Q
Sbjct: 134 FSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQ 193
Query: 278 PNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIK-DNVATNTSMLKGFCMVGRSEEAIK 336
PN +N L++ C +G+++ A ++ +M+ GI N T ++++ RS+EA++
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVE 253
Query: 337 HMKEMVSR-GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVL 395
++M+S+ G+ D ++V++N +C+ G+ A IL M P+V +++A+
Sbjct: 254 LFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGF 313
Query: 396 VAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLD 455
K++EA + + G + + Y+ ++ C+ G +L+ M S D
Sbjct: 314 CKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCR-NGETDEAMKLLGEMKASRCRAD 372
Query: 456 ATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
YN +L G +G E AL+ + + NK +Y + LC G++++
Sbjct: 373 TLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEK 426
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 192/403 (47%), Gaps = 41/403 (10%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR 204
++ + V V++ + A +Y +++ + + P+V TYT +I+G C+ G + A ++ ++
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQG-ISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL 418
Query: 205 ---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
EP+ +TY+++I G CK G + ++ + PDVV + L+DG SK+G +
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPDVVIYGVLVDGLSKQGLM 477
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
A+ +M Q + NVV +N+LI+G C DEA ++ M + GIK +VAT T++
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
++ M GR EEA+ M G++ D AY +++ +CK KP+ + + M ++
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKI 597
Query: 382 KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVE 441
++ N V +L ++E+A N+ P+ ++Y+ +ICG C ++ R+ E
Sbjct: 598 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR-RLDEAE 656
Query: 442 -----------------------------------ELVSSMLQSGHNLDATMYNCLLGGY 466
+ S M + G +A Y CL+ +
Sbjct: 657 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 716
Query: 467 CEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ D E + K +M +K + +Y + LC +G+V E
Sbjct: 717 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE 759
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 223/482 (46%), Gaps = 40/482 (8%)
Query: 53 PHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRR--SNKLSDFL 110
P+ AL +F WA +P+ Y+ I VL+ + +F AD + +N+ DF
Sbjct: 83 PNSALKYFRWAEISGKDPSFYT--------IAHVLIRNGMFDVADKVFDEMITNRGKDF- 133
Query: 111 ASKFINAFGDR-----------------GDIRGAIHWFHKAKASGPCAL--SCNAVLGVL 151
+ + DR G + A+ F + G S +L L
Sbjct: 134 --NVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSL 191
Query: 152 VRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRG-FCKMGMVESA---RKVFDEMRCEP 207
+ ++RV+L +D++ + + V + ++ FCK G V A ++ E
Sbjct: 192 IGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGFRV 250
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
++ N ++ GL +++ A R+ + + P+VVTF TLI+G+ KRGE+ A +
Sbjct: 251 GIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPA-PNVVTFCTLINGFCKRGEMDRAFDL 308
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM 327
K M+++G +P+++ Y+ LI+G +G + ++ S+ KG+K +V +S + +
Sbjct: 309 FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVK 368
Query: 328 VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSS 387
G A K M+ +G+ +V Y++++ C+ G+ EA + +++ + M+PS+ +
Sbjct: 369 SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428
Query: 388 FNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM 447
++++ L L ++M +MG P+ + Y +++ GL K +G M M
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK-QGLMLHAMRFSVKM 487
Query: 448 LQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKV 507
L L+ ++N L+ G+C + ALK M + T+ T ++ +G++
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRL 547
Query: 508 KE 509
+E
Sbjct: 548 EE 549
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 136/284 (47%), Gaps = 5/284 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + V+ V + R+ A ++ ++ K L EPD Y T+I FCK +
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL-EPDALAYCTLIDAFCKHMKPTIGLQ 587
Query: 199 VFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+FD M + + N +IH L K ++ A + FN E K PD+VT+ T+I GY
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK-MEPDIVTYNTMICGY 646
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+ EA + ++ PN VT LI LC + ++D A RM S M KG K N
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T ++ F E + K +EM +G+ + +YS+I++ CK G+ EA +I +
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPN 419
+ ++ P V ++ + R +L EA LL ++M R G P+
Sbjct: 767 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 151/321 (47%), Gaps = 6/321 (1%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD--- 201
N+++ R NR + A ++ +++ ++PDV T+TT++R G +E A +F
Sbjct: 500 NSLIDGWCRLNRFDEALKVF-RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF 558
Query: 202 EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
+M EP+A+ Y T+I CK + +++F+ +K D+ +I K +
Sbjct: 559 KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK-ISADIAVCNVVIHLLFKCHRI 617
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
++A + E +P++VTYN +I G C +DEA+R+ +++ N T T +
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
+ C + AI+ M +G + Y +++ + K + + EM K +
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Query: 382 KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVE 441
PS+ S++ + L +++EA + P+ ++Y+I+I G CKV GR+
Sbjct: 738 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV-GRLVEAA 796
Query: 442 ELVSSMLQSGHNLDATMYNCL 462
L ML++G D + L
Sbjct: 797 LLYEHMLRNGVKPDDLLQRAL 817
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 5/159 (3%)
Query: 133 KAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGM 192
K GP ++ ++ VL + N ++ A ++ ++ E +P+ TY ++ F K
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF-SIMAEKGSKPNAVTYGCLMDWFSKSVD 721
Query: 193 VESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
+E + K+F+EM+ P+ ++Y+ +I GLCK+G +D A +F++ ++K PDVV +
Sbjct: 722 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK-LLPDVVAYA 780
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
LI GY K G + EA + M G +P+ + AL E
Sbjct: 781 ILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSE 819
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 132/331 (39%), Gaps = 18/331 (5%)
Query: 195 SARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFA-------------ESKSC 241
SA K F ++ T+ H L + G D A +VF+ +S
Sbjct: 85 SALKYFRWAEISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSL 144
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKR 301
DV F L++ + G V +AL + G + ++ L S VD
Sbjct: 145 DADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIAD 202
Query: 302 MMSKMRLKGIK-DNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEY 360
K+ GI+ V+ + +L G +A+ + ++ RG + + + + ++
Sbjct: 203 HFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG- 261
Query: 361 CKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNF 420
+ + A +L ++ P+V +F + +++ A L K M + G P+
Sbjct: 262 LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 421 LSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVY 480
++YS +I G K G + + +L S L G LD +++ + Y + GD A
Sbjct: 322 IAYSTLIDGYFKA-GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYK 380
Query: 481 DMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
M+ + N TY +K LC G++ E +
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 196/403 (48%), Gaps = 9/403 (2%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
I++FG G + A +FH+ +A+G P ++ +++GVL +ANR++ A +++ + K
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAM 229
V P + Y TMI G+ G + A + + R + P+ I YN ++ L K G++D A+
Sbjct: 305 V-PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
+VF K P++ T+ LID + G++ A MQ+ G PNV T N +++
Sbjct: 364 KVFEEM--KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDR 421
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
LC S +DEA M +M K + T S++ G VGR ++A K ++M+ +
Sbjct: 422 LCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTN 481
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
Y+ ++ + G+ + I ++M+ + P + N + + E+ + +
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
+ P+ SYSI+I GL K G EL SM + G LD YN ++ G+C+
Sbjct: 542 EIKARRFVPDARSYSILIHGLIKA-GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYL 512
G A + + +M K F TY + + L ++ E Y+
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 197/403 (48%), Gaps = 12/403 (2%)
Query: 78 SCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDR----GDIRGAIHWFHK 133
S Y + D+L TA L K F + +N DR + A F +
Sbjct: 378 STYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEE 437
Query: 134 A--KASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMG 191
K P ++ +++ L + RV+ A +Y++++ ++ + YT++I+ F G
Sbjct: 438 MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML-DSDCRTNSIVYTSLIKNFFNHG 496
Query: 192 MVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTF 248
E K++ +M C P+ NT + + K GE + +F +++ PD ++
Sbjct: 497 RKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI-KARRFVPDARSY 555
Query: 249 TTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRL 308
+ LI G K G E M+EQGC + YN +I+G C G V++A +++ +M+
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKT 615
Query: 309 KGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSE 368
KG + V T S++ G + R +EA +E S+ ++L+V YS +++ + K+G+ E
Sbjct: 616 KGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDE 675
Query: 369 AVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVIC 428
A IL E++ K + P++ ++N++ LV ++ EA++ ++M + C+PN ++Y I+I
Sbjct: 676 AYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILIN 735
Query: 429 GLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGD 471
GLCKV+ + M + G Y ++ G + G+
Sbjct: 736 GLCKVR-KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 191/395 (48%), Gaps = 7/395 (1%)
Query: 122 GDIRGAIHWFHKAKASGPCALSC-NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTY 180
G + A+ F + K LS N ++ +L RA +++ A + D + K L P+V T
Sbjct: 357 GKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF-PNVRTV 415
Query: 181 TTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAE 237
M+ CK ++ A +F+EM C P+ IT+ ++I GL K G +D A +V+ + +
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Query: 238 SKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVD 297
S CR + + +T+LI + G ++ K+M Q C P++ N ++ + +G +
Sbjct: 476 S-DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 298 EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIV 357
+ + M +++ + + + + ++ G G + E + M +G LD +AY++++
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 358 NEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCS 417
+ +CK GK ++A +L EM K +P+V ++ +V L +L+EA +L +
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 418 PNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALK 477
N + YS +I G KV GR+ ++ ++Q G + +N LL + + AL
Sbjct: 655 LNVVIYSSLIDGFGKV-GRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 478 TVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYL 512
M + N+ TY + LC K + ++
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFV 748
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 142/286 (49%), Gaps = 5/286 (1%)
Query: 133 KAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGM 192
KA+ P A S + ++ L++A N ++ + ++ V D Y +I GFCK G
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV-LDTRAYNIVIDGFCKCGK 602
Query: 193 VESARKVFDEMRC---EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
V A ++ +EM+ EP +TY ++I GL K +D A +F A+SK +VV ++
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE-AKSKRIELNVVIYS 661
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
+LIDG+ K G + EA ++E+ ++G PN+ T+N+L++ L + ++EA M+
Sbjct: 662 SLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKEL 721
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
N T ++ G C V + +A +EM +GM +Y+ +++ K G +EA
Sbjct: 722 KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMG 415
++ A P + +NA+ L + +A L + R G
Sbjct: 782 GALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 138/289 (47%), Gaps = 5/289 (1%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR 204
N + + +A +A+++++ V PD +Y+ +I G K G ++F M+
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFV-PDARSYSILIHGLIKAGFANETYELFYSMK 579
Query: 205 ---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
C + YN +I G CK G+++ A ++ ++K P VVT+ ++IDG +K +
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM-KTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
EA +E + + + NVV Y++LI+G G +DEA ++ ++ KG+ N+ T S+
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
L EA+ + M + Y +++N CK+ K ++A +EM + M
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Query: 382 KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGL 430
KPS S+ + L + EA L G P+ Y+ +I GL
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 130/249 (52%), Gaps = 7/249 (2%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
I+ F G + A + K G P ++ +V+ L + +R++ A ++++ K
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA-KSKR 652
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAM 229
+E +V Y+++I GF K+G ++ A + +E+ + PN T+N+++ L K E++ A+
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEAL 712
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
F E K C P+ VT+ LI+G K + +A +EMQ+QG +P+ ++Y +I G
Sbjct: 713 VCFQSMKELK-CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
L +GN+ EA + + + G + A +M++G R+ +A +E RG+ +
Sbjct: 772 LAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIH 831
Query: 350 VKAYSVIVN 358
K V+++
Sbjct: 832 NKTCVVLLD 840
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 165/403 (40%), Gaps = 41/403 (10%)
Query: 147 VLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE 206
V+GVL R VN A + + + +Y +++ + ++ ++ EM
Sbjct: 68 VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA 127
Query: 207 PNAITYNT---MIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQE 263
+ NT M+ G K ++ V + K RP +TTLI +S
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFK-FRPAFSAYTTLIGAFSAVNHSDM 186
Query: 264 ALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR---------------- 307
L ++MQE G +P V + LI G G VD A ++ +M+
Sbjct: 187 MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCID 246
Query: 308 -------------------LKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
G+K + T TSM+ C R +EA++ + +
Sbjct: 247 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
AY+ ++ Y GK EA S+L AK PSV ++N + L K++EA+ +
Sbjct: 307 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF 366
Query: 409 KNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCE 468
+ M + +PN +Y+I+I LC+ G++ EL SM ++G + N ++ C+
Sbjct: 367 EEMKK-DAAPNLSTYNILIDMLCRA-GKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCK 424
Query: 469 DGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
+ A +M K ++ T+C+ + L G+V + Y
Sbjct: 425 SQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 10/214 (4%)
Query: 67 QPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRG 126
+P Y A I + ++ LF A S + +L+ + S I+ FG G I
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS---KRIELNVVIYSSLIDGFGKVGRIDE 675
Query: 127 AIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMI 184
A + G P + N++L LV+A +N A + Q +KE P+ TY +I
Sbjct: 676 AYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCF-QSMKELKCTPNQVTYGILI 734
Query: 185 RGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSC 241
G CK+ A + EM+ +P+ I+Y TMI GL K G + A +F+RF +
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQG 275
PD + +I+G S +A + +E + +G
Sbjct: 795 -PDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 131/504 (25%), Positives = 237/504 (47%), Gaps = 34/504 (6%)
Query: 8 ATVKPSSIVTTIT-SLLQTPDSEPLKKFSCYLTPSLVTQVIKNTHNPHHALFFFNWASNP 66
ATV P+ + S LQTP S+ FS + V+++ A + A +
Sbjct: 109 ATVAPAQLSQPPNFSPLQTPKSDLSSDFSGRRSTRFVSKMHFGRQKTTMATRHSSAAEDA 168
Query: 67 QPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRG 126
N ++S D + HSL + +S L S+ + I G+R +
Sbjct: 169 LQNAIDFS---------GDDEMFHSLMLSFESKLCGSDD-----CTYIIRELGNRNECDK 214
Query: 127 AIHWFH----KAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTT 182
A+ ++ + + +A++ L R +V +AK I++ V+ ++
Sbjct: 215 AVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNT-VYAFSA 273
Query: 183 MIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMD--GAMRVFNRFAE 237
+I + + G+ E A VF+ M+ PN +TYN +I C KG M+ + F+ +
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEM-Q 331
Query: 238 SKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVD 297
+PD +TF +L+ S+ G + A N EM + + +V +YN L++ +C G +D
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 298 EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIV 357
A ++++M +K I NV + ++++ GF GR +EA+ EM G+ LD +Y+ ++
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 358 NEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCS 417
+ Y K+G+ EA+ ILREM + +K V ++NA+ + K +E + M R
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL 511
Query: 418 PNFLSYSIVICGLCK---VKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEM 474
PN L+YS +I G K K M++ E S+ L++ D +Y+ L+ C++G
Sbjct: 512 PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA----DVVLYSALIDALCKNGLVGS 567
Query: 475 ALKTVYDMIDKSFLFNKDTYCTFV 498
A+ + +M + N TY + +
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSII 591
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 151/300 (50%), Gaps = 7/300 (2%)
Query: 213 NTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQ 272
+ MI L + G++ A R+F A + V F+ LI Y + G +EA++ M+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFET-AFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK 295
Query: 273 EQGCQPNVVTYNALIEGLCLSGNVD--EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGR 330
E G +PN+VTYNA+I+ C G ++ + + +M+ G++ + T S+L C G
Sbjct: 296 EYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGG 353
Query: 331 SEEAIKHM-KEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFN 389
EA +++ EM +R ++ DV +Y+ +++ CK G+ A IL +M KR+ P+V S++
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 390 AVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
V + +EA+ L M +G + + +SY+ ++ KV GR + +++ M
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKV-GRSEEALDILREMAS 472
Query: 450 SGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
G D YN LLGGY + G + K +M + L N TY T + G KE
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 132/288 (45%), Gaps = 41/288 (14%)
Query: 115 INAFGDRG-DIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
I+A G G + + +F + + +G P ++ N++L V R A+ ++D++
Sbjct: 310 IDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR 369
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGA 228
+E DVF+Y T++ CK G ++ A ++ +M R PN ++Y+T+I G K G D A
Sbjct: 370 -IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEA 428
Query: 229 MRVFN----------------------------------RFAESKSCRPDVVTFTTLIDG 254
+ +F R S + DVVT+ L+ G
Sbjct: 429 LNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
Y K+G+ E EM+ + PN++TY+ LI+G G EA + + + G++ +
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRAD 548
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCK 362
V ++++ C G A+ + EM G+ +V Y+ I++ + +
Sbjct: 549 VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 147/332 (44%), Gaps = 67/332 (20%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
S N +L + + +++LA I Q+ + ++ P+V +Y+T+I GF K G + A +F
Sbjct: 375 FSYNTLLDAICKGGQMDLAFEILAQMPVKRIM-PNVVSYSTVIDGFAKAGRFDEALNLFG 433
Query: 202 EMR--------------------------------------CEPNAITYNTMIHGLCKKG 223
EMR + + +TYN ++ G K+G
Sbjct: 434 EMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQG 493
Query: 224 EMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTY 283
+ D +VF + + P+++T++TLIDGYSK G +EA+ +E + G + +VV Y
Sbjct: 494 KYDEVKKVFTEM-KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLY 552
Query: 284 NALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVS 343
+ALI+ LC +G V A ++ +M +GI NV T S++ F GRS +
Sbjct: 553 SALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF---GRSATMDRSADYSNG 609
Query: 344 RGMDLDVKAYSVI----------------------VNEYCKIG--KPSEAVSILREMVAK 379
+ A S + + C+ G + S + + R+M
Sbjct: 610 GSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQL 669
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
+KP+V +F+A+ E+A +LL+ +
Sbjct: 670 EIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 99/226 (43%), Gaps = 61/226 (26%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
++ NA+LG + + + K ++ ++ +E ++ P++ TY+T+I G+ K G+ + A ++F
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFTEMKREHVL-PNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 202 EMRC---EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
E + + + Y+ +I LCK G + A+ + + + + P+VVT+ ++ID + +
Sbjct: 539 EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTK-EGISPNVVTYNSIIDAFGRS 597
Query: 259 GEVQEALN-------------------------------------------CMKEMQEQG 275
+ + + C + MQE
Sbjct: 598 ATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELS 657
Query: 276 C-------------QPNVVTYNALIEGLCLSGNVDEAKRMMSKMRL 308
C +PNVVT++A++ + ++A ++ ++RL
Sbjct: 658 CILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 703
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 142/573 (24%), Positives = 239/573 (41%), Gaps = 95/573 (16%)
Query: 33 KFSCYLT-PSLVTQVIKNTH-NPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSH 90
+F LT P+L+ +V+ P A FFNW ++ R +AA+ ++L +
Sbjct: 77 QFRLLLTDPNLLIRVLNMIRVKPEIAFRFFNWIQRQ----SDVKQSRQAFAAMLEILAEN 132
Query: 91 SLFSTADSLLRRS-----NKLSDFLASKFIN-------------AFGDRGDIRGAIHWFH 132
L S A + RS +++ D L + + + + F
Sbjct: 133 DLMSEAYLVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFE 192
Query: 133 KAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL------------------ 172
K G P +CN VL VL + +N A A+Y+ +++ +
Sbjct: 193 KMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAG 252
Query: 173 ----------------VEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAIT---YN 213
+E TY +I GF K G +E AR+ +MR A+T +N
Sbjct: 253 DLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFN 312
Query: 214 TMIHGLCKKGEMDGAMRV-------------------------FNRFAESKS-----CRP 243
+I G CK+G D A V F R +++ P
Sbjct: 313 PLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP 372
Query: 244 DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMM 303
DVV++ TL+ GY K G+ EA +++ P++VTYN LI+GLC SGN++ A+R+
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432
Query: 304 SKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKI 363
+M + I +V T T+++KGF G A + EM+ +G+ D AY+ ++
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 492
Query: 364 GKPSEAVSILREMVA-KRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLS 422
G +A + EMVA P ++ +N L L +A+ + + R+G P+ ++
Sbjct: 493 GDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 552
Query: 423 YSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDM 482
Y+ VI G + G+ ++ L ML+ Y L+ G+ + G E A + +M
Sbjct: 553 YTTVIRGYLE-NGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM 611
Query: 483 IDKSFLFNKDTYCTFVKELCAKGKVKEEYLKRC 515
+ N T+ + +C G + E Y C
Sbjct: 612 KKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLC 644
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 149/273 (54%), Gaps = 6/273 (2%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ ++ V+ +++A +YD+++++ ++PD + YTT G ++G + A +
Sbjct: 442 PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG-IKPDGYAYTTRAVGELRLGDSDKAFR 500
Query: 199 VFDEM----RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDG 254
+ +EM P+ YN I GLCK G + A+ F R PD VT+TT+I G
Sbjct: 501 LHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIE-FQRKIFRVGLVPDHVTYTTVIRG 559
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
Y + G+ + A N EM + P+V+TY LI G +G +++A + ++M+ +G++ N
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
V T+ ++L G C G +EA +++ +M G+ + +Y++++++ C K E V + +
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYK 679
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
EM+ K ++P + A+F+ L + + E L
Sbjct: 680 EMLDKEIEPDGYTHRALFKHLEKDHESREVEFL 712
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 164/364 (45%), Gaps = 46/364 (12%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + N + L R++ A+ + ++ PDV +Y T++ G+ KMG A
Sbjct: 341 PTTSTYNIYICALCDFGRIDDARELL-----SSMAAPDVVSYNTLMHGYIKMGKFVEASL 395
Query: 199 VFDEMRC---EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+FD++R P+ +TYNT+I GLC+ G ++GA R+ ++ PDV+T+TTL+ G+
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMT-TQLIFPDVITYTTLVKGF 454
Query: 256 SKRGEVQEALNCMKEMQEQGCQPN------------------------------------ 279
K G + A EM +G +P+
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD 514
Query: 280 VVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMK 339
+ YN I+GLC GN+ +A K+ G+ + T T++++G+ G+ + A
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574
Query: 340 EMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAER 399
EM+ + + V Y V++ + K G+ +A EM + ++P+V + NA+ +
Sbjct: 575 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAG 634
Query: 400 KLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMY 459
++EA L M G PN SY+++I C + + + V +L ML D +
Sbjct: 635 NIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFE-KWEEVVKLYKEMLDKEIEPDGYTH 693
Query: 460 NCLL 463
L
Sbjct: 694 RALF 697
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 146/311 (46%), Gaps = 14/311 (4%)
Query: 113 KFINAFGDRGDIR-GAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
KF+ A D+R G IH P ++ N ++ L + + A+ + +++ +
Sbjct: 389 KFVEASLLFDDLRAGDIH---------PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQ- 438
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGA 228
L+ PDV TYTT+++GF K G + A +V+DEM +P+ Y T G + G+ D A
Sbjct: 439 LIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKA 498
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
R+ + PD+ + IDG K G + +A+ +++ G P+ VTY +I
Sbjct: 499 FRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIR 558
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
G +G A+ + +M K + +V T ++ G GR E+A ++ EM RG+
Sbjct: 559 GYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRP 618
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
+V ++ ++ CK G EA L +M + + P+ S+ + K EE V L
Sbjct: 619 NVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLY 678
Query: 409 KNMPRMGCSPN 419
K M P+
Sbjct: 679 KEMLDKEIEPD 689
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 224/461 (48%), Gaps = 15/461 (3%)
Query: 59 FFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLL---RRSN-KLSDFLASKF 114
F+W S+ + + +S+ +C ++ +L + +F+ + +L R N KL+ S
Sbjct: 83 LFDWLSSEKKD-EFFSNGFAC-SSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHV 140
Query: 115 INAFGDRGDIRGAIHWFH---KAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
++A+ + G + A+ + + S P ++CN++L +LV++ R+ A+ +YD++
Sbjct: 141 LHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRG 200
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGA 228
D ++ +++G C G VE RK+ + C PN + YNT+I G CK G+++ A
Sbjct: 201 -DSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
VF + K P + TF T+I+G+ K G+ + + E++E+G + +V N +I+
Sbjct: 260 YLVFKEL-KLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIID 318
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
G + + + K +VAT ++ C G+ E A+ + E +G+
Sbjct: 319 AKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIP 378
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
+ +Y+ ++ YCK + A +L +M + KP + ++ + LV +++AV +
Sbjct: 379 NNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMK 438
Query: 409 KNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCE 468
+ G SP+ Y++++ GLCK GR + L S ML DA +Y L+ G+
Sbjct: 439 VKLIDRGVSPDAAIYNMLMSGLCKT-GRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497
Query: 469 DGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
GD + A K ++K + + +K C G + E
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDE 538
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/533 (24%), Positives = 229/533 (42%), Gaps = 75/533 (14%)
Query: 41 SLVTQVIKNTHNP-HHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSL 99
+L + +K TH H L + + + Y + Y ++ DV+ +SL S L
Sbjct: 124 NLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLS----L 179
Query: 100 LRRSNKLSDFLASKFINAFGDRGD----------IRGAIH--------------WFHKAK 135
L +S +L D A K + DRGD ++G + W K
Sbjct: 180 LVKSRRLGD--ARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRW---GK 234
Query: 136 ASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVES 195
P + N ++G + + A ++ ++ + + P + T+ TMI GFCK G +
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFM-PTLETFGTMINGFCKEGDFVA 293
Query: 196 ARKVFDEMR--------------------------------------CEPNAITYNTMIH 217
+ ++ E++ C+P+ TYN +I+
Sbjct: 294 SDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILIN 353
Query: 218 GLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQ 277
LCK+G+ + A+ + A K P+ +++ LI Y K E A + +M E+GC+
Sbjct: 354 RLCKEGKKEVAVGFLDE-ASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCK 412
Query: 278 PNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKH 337
P++VTY LI GL +SG++D+A M K+ +G+ + A ++ G C GR A
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472
Query: 338 MKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVA 397
EM+ R + D Y+ +++ + + G EA + V K +K V NA+ +
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532
Query: 398 ERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDAT 457
L+EA+ + M P+ +YS +I G K + M ++ M ++ +
Sbjct: 533 SGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK-QQDMATAIKIFRYMEKNKCKPNVV 591
Query: 458 MYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEE 510
Y L+ G+C GD +MA +T +M + + N TY T ++ L + E+
Sbjct: 592 TYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEK 644
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 177/384 (46%), Gaps = 13/384 (3%)
Query: 93 FSTADSLL----RRSNKLSDFLASKFINA---FGDRGDIRGAIHWFHKAKASGPCALSCN 145
F +D LL R ++S + + I+A G + D +I W A P + N
Sbjct: 291 FVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWI-IANDCKPDVATYN 349
Query: 146 AVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR- 204
++ L + + +A D+ K+ L+ P+ +Y +I+ +CK + A K+ +M
Sbjct: 350 ILINRLCKEGKKEVAVGFLDEASKKGLI-PNNLSYAPLIQAYCKSKEYDIASKLLLQMAE 408
Query: 205 --CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQ 262
C+P+ +TY +IHGL G MD A+ + + + + PD + L+ G K G
Sbjct: 409 RGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLID-RGVSPDAAIYNMLMSGLCKTGRFL 467
Query: 263 EALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSML 322
A EM ++ P+ Y LI+G SG+ DEA+++ S KG+K +V + +M+
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527
Query: 323 KGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMK 382
KGFC G +EA+ M M + D YS I++ Y K + A+ I R M + K
Sbjct: 528 KGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCK 587
Query: 383 PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEE 442
P+V ++ ++ + + A K M PN ++Y+ +I L K ++
Sbjct: 588 PNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVY 647
Query: 443 LVSSMLQSGHNLDATMYNCLLGGY 466
M+ + + +NCLL G+
Sbjct: 648 YWELMMTNKCVPNEVTFNCLLQGF 671
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 182/407 (44%), Gaps = 31/407 (7%)
Query: 56 ALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLL----RRSNKLSDFLA 111
A+ F + AS PNN S YA + + A LL R K
Sbjct: 364 AVGFLDEASKKGLIPNNLS-----YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTY 418
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
I+ G + A++ K G P A N ++ L + R AK ++ +++
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD 478
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFD---EMRCEPNAITYNTMIHGLCKKGEMD 226
++ PD + Y T+I GF + G + ARKVF E + + + +N MI G C+ G +D
Sbjct: 479 RNIL-PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLD 537
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
A+ NR E + PD T++T+IDGY K+ ++ A+ + M++ C+PNVVTY +L
Sbjct: 538 EALACMNRMNE-EHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSL 596
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRS-EEAIKHMKEMVSRG 345
I G C G+ A+ +M+L+ + NV T T++++ + E+A+ + + M++
Sbjct: 597 INGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNK 656
Query: 346 MDLDVKAYSVIVNEYCKI--------------GKPSEAVSILREMVAKRMKPSVSSFNAV 391
+ ++ ++ + K G+ S M + +++N+
Sbjct: 657 CVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSA 716
Query: 392 FRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQ 438
L ++ A + M + G SP+ +S++ ++ G C V Q
Sbjct: 717 LVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQ 763
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 152/334 (45%), Gaps = 62/334 (18%)
Query: 104 NKLSD-FLASKFINAFGDRGDIRGAIHWFHKAKASGP--CALSCNAVLGVLVRANRVNLA 160
N L D ++ + I+ F GD A F + G + NA++ R+ ++ A
Sbjct: 480 NILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEA 539
Query: 161 KAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIH 217
A +++ +E LV PD FTY+T+I G+ K + +A K+F M +C+PN +TY ++I+
Sbjct: 540 LACMNRMNEEHLV-PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLIN 598
Query: 218 GLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGE-VQEALNCMKEMQEQGC 276
G C +G+ A F + + P+VVT+TTLI +K +++A+ + M C
Sbjct: 599 GFCCQGDFKMAEETFKEM-QLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKC 657
Query: 277 QPNVVTYNALIEG----------------------------------------------- 289
PN VT+N L++G
Sbjct: 658 VPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSAL 717
Query: 290 --LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMK--EMVSRG 345
LC+ G V A KM KG + + ++L GFC+VG S++ ++M + +G
Sbjct: 718 VCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQW-RNMDFCNLGEKG 776
Query: 346 MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
+++ V+ YS ++ ++ EA +IL MV K
Sbjct: 777 LEVAVR-YSQVLEQHLPQPVICEASTILHAMVEK 809
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 234/524 (44%), Gaps = 63/524 (12%)
Query: 41 SLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLL 100
SLV V+ HAL FF W H R + + +L S + A +L
Sbjct: 118 SLVYNVLHGAKKLEHALQFFRWTE----RSGLIRHDRDTHMKMIKMLGEVSKLNHARCIL 173
Query: 101 ----RRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRA 154
+ + + I ++G G ++ ++ F K K G S N++ V++R
Sbjct: 174 LDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRR 233
Query: 155 NRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAIT 211
R +AK ++++V E VEP TY M+ GF +E+A + F++M+ P+ T
Sbjct: 234 GRYMMAKRYFNKMVSEG-VEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDAT 292
Query: 212 YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM 271
+NTMI+G C+ +MD A ++F +K P VV++TT+I GY V + L +EM
Sbjct: 293 FNTMINGFCRFKKMDEAEKLFVEMKGNK-IGPSVVSYTTMIKGYLAVDRVDDGLRIFEEM 351
Query: 272 QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI--KDN--------------- 314
+ G +PN TY+ L+ GLC +G + EAK ++ M K I KDN
Sbjct: 352 RSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGD 411
Query: 315 VATNTSMLKGF-------------------CMVGRSEEAIKHM-----KEMVSRGMD--- 347
+A T +LK C AIK + KE++ R D
Sbjct: 412 MAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLE 471
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
++ AY+ I+ C G+ ++A + R+++ KR + N + R E + + +
Sbjct: 472 MEPSAYNPIIEYLCNNGQTAKAEVLFRQLM-KRGVQDQDALNNLIRGHAKEGNPDSSYEI 530
Query: 408 LKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
LK M R G +Y ++I KG + + SM++ GH D++++ ++
Sbjct: 531 LKIMSRRGVPRESNAYELLIKSYMS-KGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLF 589
Query: 468 EDGDEEMALKTVYDMIDKSFLF--NKDTYCTFVKELCAKGKVKE 509
EDG + A + + MIDK+ N D ++ L +G V+E
Sbjct: 590 EDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEE 633
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 186/439 (42%), Gaps = 56/439 (12%)
Query: 127 AIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMI 184
A+ +F K G P + N ++ R +++ A+ ++ ++ K + P V +YTTMI
Sbjct: 274 ALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEM-KGNKIGPSVVSYTTMI 332
Query: 185 RGFCKMGMVESARKVFDEMRC---EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSC 241
+G+ + V+ ++F+EMR EPNA TY+T++ GLC G+M A +
Sbjct: 333 KGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIA 392
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQ---------------EQGCQPNVV----- 281
D F L+ SK G++ A +K M E C+ +
Sbjct: 393 PKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIK 452
Query: 282 -----------------------TYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
YN +IE LC +G +A+ + ++ +G++D A N
Sbjct: 453 LLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALN 512
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
++++G G + + + +K M RG+ + AY +++ Y G+P +A + L MV
Sbjct: 513 -NLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVE 571
Query: 379 KRMKPSVSSFNAVFRVLVAERKLEEA--VLLLKNMPRMGCSPNFLSYSIVICGLCKVKGR 436
P S F +V L + +++ A V+++ +G N + ++ L ++G
Sbjct: 572 DGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALL-MRGH 630
Query: 437 MQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCT 496
++ + + Q+GH D + LL E G ALK + +++ +Y
Sbjct: 631 VEEALGRIDLLNQNGHTAD---LDSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDK 687
Query: 497 FVKELCAKGKVKEEYLKRC 515
+ L GK Y C
Sbjct: 688 VLDALLGAGKTLNAYSVLC 706
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 168/380 (44%), Gaps = 13/380 (3%)
Query: 147 VLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM--R 204
V VL A ++ A + + L+ D T+ MI+ ++ + AR + +M +
Sbjct: 120 VYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEK 179
Query: 205 CEP-NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQE 263
P + + +I K G + ++++F + + R + ++ +L +RG
Sbjct: 180 GVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERT-IKSYNSLFKVILRRGRYMM 238
Query: 264 ALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLK 323
A +M +G +P TYN ++ G LS ++ A R M+ +GI + AT +M+
Sbjct: 239 AKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMIN 298
Query: 324 GFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKP 383
GFC + +EA K EM + V +Y+ ++ Y + + + + I EM + ++P
Sbjct: 299 GFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEP 358
Query: 384 SVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEEL 443
+ ++++ + L K+ EA +LKNM +P S + + G M E+
Sbjct: 359 NATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEV 418
Query: 444 VSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF-NKDT-------YC 495
+ +M +A Y L+ C+ A+K + +I+K + ++DT Y
Sbjct: 419 LKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYN 478
Query: 496 TFVKELCAKGKV-KEEYLKR 514
++ LC G+ K E L R
Sbjct: 479 PIIEYLCNNGQTAKAEVLFR 498
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 118/270 (43%), Gaps = 15/270 (5%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR 204
N ++ L + A+ ++ Q++K + + D +IRG K G +S+ ++ M
Sbjct: 478 NPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALN--NLIRGHAKEGNPDSSYEILKIMS 535
Query: 205 C-----EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRG 259
E NA Y +I KGE A + E PD F ++I+ + G
Sbjct: 536 RRGVPRESNA--YELLIKSYMSKGEPGDAKTALDSMVEDGHV-PDSSLFRSVIESLFEDG 592
Query: 260 EVQEALNCMKEMQEQ--GCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVAT 317
VQ A M M ++ G + N+ ++E L + G+V+EA + ++ L + A
Sbjct: 593 RVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEA---LGRIDLLNQNGHTAD 649
Query: 318 NTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMV 377
S+L G++ A+K + + R + L+ +Y +++ GK A S+L +++
Sbjct: 650 LDSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIM 709
Query: 378 AKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
K S + + + L E ++A +L
Sbjct: 710 EKGSSTDWKSSDELIKSLNQEGNTKQADVL 739
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 147/266 (55%), Gaps = 7/266 (2%)
Query: 119 GDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPD 176
G+ G + A+ F K+K P S NA+L L+ + L + +Y Q++++ PD
Sbjct: 195 GEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGF-SPD 253
Query: 177 VFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFN 233
V TY ++ ++G ++ ++FDEM + P++ TYN ++H L K + A+ N
Sbjct: 254 VLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLN 313
Query: 234 RFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
E P V+ +TTLIDG S+ G ++ + EM + GC+P+VV Y +I G +S
Sbjct: 314 HMKEV-GIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVS 372
Query: 294 GNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAY 353
G +D+AK M +M +KG NV T SM++G CM G EA +KEM SRG + + Y
Sbjct: 373 GELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVY 432
Query: 354 SVIVNEYCKIGKPSEAVSILREMVAK 379
S +V+ K GK SEA ++REMV K
Sbjct: 433 STLVSYLRKAGKLSEARKVIREMVKK 458
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 115/246 (46%), Gaps = 2/246 (0%)
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALN 266
P +YN +++ L + V+ + E PDV+T+ L+ + G++
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWVYKQMLED-GFSPDVLTYNILLWTNYRLGKMDRFDR 275
Query: 267 CMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC 326
EM G P+ TYN L+ L A ++ M+ GI +V T+++ G
Sbjct: 276 LFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLS 335
Query: 327 MVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVS 386
G E + EMV G DV Y+V++ Y G+ +A + REM K P+V
Sbjct: 336 RAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVF 395
Query: 387 SFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSS 446
++N++ R L + EA LLK M GC+PNF+ YS ++ L K G++ +++
Sbjct: 396 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKA-GKLSEARKVIRE 454
Query: 447 MLQSGH 452
M++ GH
Sbjct: 455 MVKKGH 460
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 137/322 (42%), Gaps = 8/322 (2%)
Query: 195 SARKVFDEMRCEPNAITYNTMIHGLCKKGEMDG-------AMRVFNRFAESKSCRPDVVT 247
+++ V DE+ + + ++ G+ + D A R F E + R V +
Sbjct: 92 NSKSVLDELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNS 151
Query: 248 FTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR 307
+ L+ +++ GE + + EM + G T+N LI +G +A K +
Sbjct: 152 YHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSK 211
Query: 308 LKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPS 367
+ + ++L V + + K+M+ G DV Y++++ ++GK
Sbjct: 212 TFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMD 271
Query: 368 EAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI 427
+ EM P ++N + +L K A+ L +M +G P+ L Y+ +I
Sbjct: 272 RFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLI 331
Query: 428 CGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSF 487
GL + G ++ + + M+++G D Y ++ GY G+ + A + +M K
Sbjct: 332 DGLSRA-GNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 488 LFNKDTYCTFVKELCAKGKVKE 509
L N TY + ++ LC G+ +E
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFRE 412
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 131/335 (39%), Gaps = 38/335 (11%)
Query: 177 VFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
V +Y +++ F + G ++ ++ DEM + T T +C GE A + +F
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFM 208
Query: 237 ESKSC--RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSG 294
+SK+ RP ++ +++ + + K+M E G P+V+TYN L+ G
Sbjct: 209 KSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLG 268
Query: 295 NVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYS 354
+D R+ EM G D Y+
Sbjct: 269 KMDRFDRLFD-----------------------------------EMARDGFSPDSYTYN 293
Query: 355 VIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRM 414
++++ K KP A++ L M + PSV + + L LE L M +
Sbjct: 294 ILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKA 353
Query: 415 GCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEM 474
GC P+ + Y+++I G V G + +E+ M G + YN ++ G C G+
Sbjct: 354 GCRPDVVCYTVMITGYV-VSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFRE 412
Query: 475 ALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
A + +M + N Y T V L GK+ E
Sbjct: 413 ACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSE 447
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 193/369 (52%), Gaps = 5/369 (1%)
Query: 133 KAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGM 192
+++ GP +S N V+ R ++LA+ ++ ++++ L +P+ +TY+ +I G +
Sbjct: 470 ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGL-KPNNYTYSILIDGCFRNHD 528
Query: 193 VESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
++A +V + M E N + Y T+I+GLCK G+ A + E K +++
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN 588
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
++IDG+ K GE+ A+ +EM G PNV+TY +L+ GLC + +D+A M +M+ K
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
G+K ++ +++ GFC E A E++ G++ Y+ +++ + +G A
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAA 708
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICG 429
+ + ++M+ ++ + ++ + L+ + L A L M +G P+ + Y++++ G
Sbjct: 709 LDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNG 768
Query: 430 LCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF 489
L K KG+ V ++ M ++ + +YN ++ G+ +G+ + A + +M+DK L
Sbjct: 769 LSK-KGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILP 827
Query: 490 NKDTYCTFV 498
+ T+ V
Sbjct: 828 DGATFDILV 836
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 190/399 (47%), Gaps = 43/399 (10%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + +V+ V+ ++ A + D+++ + + +V T++I G CK + SA
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDG-ISMNVVAATSLITGHCKNNDLVSALV 360
Query: 199 VFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+FD+M E PN++T++ +I K GEM+ A+ + + E P V T+I G+
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKM-EVLGLTPSVFHVHTIIQGW 419
Query: 256 ----------------------------------SKRGEVQEALNCMKEMQEQGCQPNVV 281
K+G+ EA + +M+ +G PNVV
Sbjct: 420 LKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 282 TYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEE-AIKHMKE 340
+YN ++ G C N+D A+ + S + KG+K N T + ++ G C E+ A++ +
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG-CFRNHDEQNALEVVNH 538
Query: 341 MVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMV-AKRMKPSVSSFNAVFRVLVAER 399
M S ++++ Y I+N CK+G+ S+A +L M+ KR+ S S+N++ E
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEG 598
Query: 400 KLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMY 459
+++ AV + M G SPN ++Y+ ++ GLCK RM E+ M G LD Y
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCK-NNRMDQALEMRDEMKNKGVKLDIPAY 657
Query: 460 NCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
L+ G+C+ + E A +++++ ++ Y + +
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI 696
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 129/513 (25%), Positives = 230/513 (44%), Gaps = 71/513 (13%)
Query: 41 SLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLL 100
S++ ++ +NP AL F+NWA +P ++ + I ++ S + A LL
Sbjct: 74 SVIDVLLNRRNNPEAALRFYNWA---RPWRGSFEDGDVFWVLIHILVSSPETYGRASDLL 130
Query: 101 RR----SN--KLSDFLASKFIN---AFGDRGDIRG---AIHWFHKAKASG---------- 138
R SN ++ L SK ++ +FG + R ++ + K + +
Sbjct: 131 IRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQML 190
Query: 139 -----PCALSCNAVLGVLVRANRVNLAKAIYDQVV------------------------K 169
P N L LV+ N + AK +Y ++V
Sbjct: 191 ELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPA 250
Query: 170 EAL----------VEPDVFTYTTMIRGFCKMGMVESARKVFDEMR----CEPNAITYNTM 215
EAL EPD Y+ ++ CK + A + EM+ C P+ TY ++
Sbjct: 251 EALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSV 310
Query: 216 IHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQG 275
I K+G MD A+R+ + S +VV T+LI G+ K ++ AL +M+++G
Sbjct: 311 ILASVKQGNMDDAIRLKDEML-SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEG 369
Query: 276 CQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAI 335
PN VT++ LIE +G +++A KM + G+ +V ++++G+ + EEA+
Sbjct: 370 PSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEAL 429
Query: 336 KHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVL 395
K E G+ +V + I++ CK GK EA +L +M ++ + P+V S+N V
Sbjct: 430 KLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGH 488
Query: 396 VAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLD 455
++ ++ A ++ N+ G PN +YSI+I G C Q E+V+ M S ++
Sbjct: 489 CRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG-CFRNHDEQNALEVVNHMTSSNIEVN 547
Query: 456 ATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFL 488
+Y ++ G C+ G A + + +MI++ L
Sbjct: 548 GVVYQTIINGLCKVGQTSKARELLANMIEEKRL 580
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 184/401 (45%), Gaps = 10/401 (2%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
S I F G++ A+ ++ K + G P + ++ ++ + A ++D+ +
Sbjct: 378 SVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE 437
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMD 226
L +VF T++ CK G + A ++ +M PN ++YN ++ G C++ MD
Sbjct: 438 TGLA--NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMD 495
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
A VF+ E K +P+ T++ LIDG + + Q AL + M + N V Y +
Sbjct: 496 LARIVFSNILE-KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTI 554
Query: 287 IEGLCLSGNVDEAKRMMSKM-RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG 345
I GLC G +A+ +++ M K + + + S++ GF G + A+ +EM G
Sbjct: 555 INGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNG 614
Query: 346 MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAV 405
+ +V Y+ ++N CK + +A+ + EM K +K + ++ A+ +E A
Sbjct: 615 ISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESAS 674
Query: 406 LLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGG 465
L + G +P+ Y+ +I G + G M +L ML+ G D Y L+ G
Sbjct: 675 ALFSELLEEGLNPSQPIYNSLISGFRNL-GNMVAALDLYKKMLKDGLRCDLGTYTTLIDG 733
Query: 466 YCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGK 506
+DG+ +A + +M + ++ Y V L KG+
Sbjct: 734 LLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 197/418 (47%), Gaps = 12/418 (2%)
Query: 97 DSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAV-LGVLVRAN 155
D +L ++ A+ I D+ A+ F K + GP S N+V VL+
Sbjct: 328 DEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP---SPNSVTFSVLIEWF 384
Query: 156 RVN--LAKAIYDQVVKEAL-VEPDVFTYTTMIRGFCKMGMVESARKVFDEM--RCEPNAI 210
R N + KA+ E L + P VF T+I+G+ K E A K+FDE N
Sbjct: 385 RKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVF 444
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKE 270
NT++ LCK+G+ D A + ++ ES+ P+VV++ ++ G+ ++ + A
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKM-ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSN 503
Query: 271 MQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGR 330
+ E+G +PN TY+ LI+G + + A +++ M I+ N +++ G C VG+
Sbjct: 504 ILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQ 563
Query: 331 SEEAIKHMKEMVS-RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFN 389
+ +A + + M+ + + + +Y+ I++ + K G+ AV+ EM + P+V ++
Sbjct: 564 TSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYT 623
Query: 390 AVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
++ L ++++A+ + M G + +Y +I G CK + M+ L S +L+
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCK-RSNMESASALFSELLE 682
Query: 450 SGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKV 507
G N +YN L+ G+ G+ AL M+ + TY T + L G +
Sbjct: 683 EGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNL 740
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 145/286 (50%), Gaps = 4/286 (1%)
Query: 147 VLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM--- 203
++ L + + + A+ + +++E + +Y ++I GF K G ++SA ++EM
Sbjct: 554 IINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN 613
Query: 204 RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQE 263
PN ITY ++++GLCK MD A+ + + ++K + D+ + LIDG+ KR ++
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEM-KNKGVKLDIPAYGALIDGFCKRSNMES 672
Query: 264 ALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLK 323
A E+ E+G P+ YN+LI G GN+ A + KM G++ ++ T T+++
Sbjct: 673 ASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLID 732
Query: 324 GFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKP 383
G G A + EM + G+ D Y+VIVN K G+ + V + EM + P
Sbjct: 733 GLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTP 792
Query: 384 SVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICG 429
+V +NAV E L+EA L M G P+ ++ I++ G
Sbjct: 793 NVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 129/264 (48%), Gaps = 7/264 (2%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
I+ F G++ A+ + + +G P ++ +++ L + NR++ A + D++ K
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM-KNK 648
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGA 228
V+ D+ Y +I GFCK +ESA +F E+ E P+ YN++I G G M A
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAA 708
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
+ ++ + + R D+ T+TTLIDG K G + A EMQ G P+ + Y ++
Sbjct: 709 LDLYKKMLKD-GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVN 767
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
GL G + +M +M+ + NV +++ G G +EA + EM+ +G+
Sbjct: 768 GLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILP 827
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSI 372
D + ++V+ +P A S+
Sbjct: 828 DGATFDILVSGQVGNLQPVRAASL 851
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 7/269 (2%)
Query: 248 FTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR 307
F L++ YSK + A++ + +M E P N + L ++ EAK + S+M
Sbjct: 166 FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMV 225
Query: 308 LKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPS 367
G+ + T +++ + EA++ + + RG + D YS+ V CK +
Sbjct: 226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLA 285
Query: 368 EAVSILREMVAKRM-KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
A S+LREM K++ PS ++ +V V + +++A+ L M G S N ++ + +
Sbjct: 286 MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSL 345
Query: 427 ICGLCKVKGRMQLVEELV--SSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMID 484
I G CK LV LV M + G + ++ ++ L+ + ++G+ E AL+ Y ++
Sbjct: 346 ITGHCK---NNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALE-FYKKME 401
Query: 485 KSFLFNKDTYCTFVKELCAKGKVKEEYLK 513
L + + + KG+ EE LK
Sbjct: 402 VLGLTPSVFHVHTIIQGWLKGQKHEEALK 430
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 134/535 (25%), Positives = 234/535 (43%), Gaps = 60/535 (11%)
Query: 26 PDSEPLKKFSCYLTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITD 85
P EPL F L+ +++T VIK+ N FF WAS R + + D
Sbjct: 49 PALEPLVPF---LSKNIITSVIKDEVNRQLGFRFFIWASR-----RERLRSRESFGLVID 100
Query: 86 VLLSHS----LFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--P 139
+L + + T + L + + I+A+ G A+ F + K P
Sbjct: 101 MLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRP 160
Query: 140 CALSCNAVLGVLVRAN-RVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
+ N +L V++R LA A+Y++++K P+++T+ ++ G K G A+K
Sbjct: 161 DVFTYNVILRVMMREEVFFMLAFAVYNEMLK-CNCSPNLYTFGILMDGLYKKGRTSDAQK 219
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+FD+M PN +TY +I GLC++G D A ++F S + PD V L+DG+
Sbjct: 220 MFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGN-YPDSVAHNALLDGF 278
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G + EA ++ ++ G + Y++LI+GL + +A + + M K IK ++
Sbjct: 279 CKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDI 338
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T +++G G+ E+A+K + M S+G+ D Y+ ++ C G E S+ E
Sbjct: 339 ILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLE 398
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
M P + + + + EA + + + GCSP+ +++ +I GLCK G
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCK-SG 457
Query: 436 RMQLVEELV-----------------------SSMLQSGHNL----------------DA 456
++ L+ +M++SG L D
Sbjct: 458 ELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDI 517
Query: 457 TMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
YN L+ G+C GD + ALK + + K + TY T + L G+ +E +
Sbjct: 518 VSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAF 572
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 176/350 (50%), Gaps = 8/350 (2%)
Query: 168 VKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGE 224
+K V D + + +I + KMGM E A + F M+ C P+ TYN ++ + ++
Sbjct: 118 LKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEV 177
Query: 225 MDG-AMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTY 283
A V+N + +C P++ TF L+DG K+G +A +M +G PN VTY
Sbjct: 178 FFMLAFAVYNEMLKC-NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTY 236
Query: 284 NALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVS 343
LI GLC G+ D+A+++ +M+ G + + ++L GFC +GR EA + ++
Sbjct: 237 TILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK 296
Query: 344 RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEE 403
G L ++ YS +++ + + ++A + M+ K +KP + + + + L K+E+
Sbjct: 297 DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIED 356
Query: 404 AVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLL 463
A+ LL +MP G SP+ Y+ VI LC +G ++ L M ++ DA + L+
Sbjct: 357 ALKLLSSMPSKGISPDTYCYNAVIKALCG-RGLLEEGRSLQLEMSETESFPDACTHTILI 415
Query: 464 GGYCEDGDEEMALKTVYDMIDKSFLF-NKDTYCTFVKELCAKGKVKEEYL 512
C +G A + ++ I+KS + T+ + LC G++KE L
Sbjct: 416 CSMCRNGLVREA-EEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARL 464
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 131/276 (47%), Gaps = 27/276 (9%)
Query: 80 YAAITDVLLSHSLFSTADSL----LRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAK 135
Y+++ D L ++ A L L+++ K L + I G I A+
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 136 ASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMV 193
+ G P NAV+ L + +++ ++ E PD T+T +I C+ G+V
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEM-SETESFPDACTHTILICSMCRNGLV 424
Query: 194 ESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVV---- 246
A ++F E+ C P+ T+N +I GLCK GE+ A + ++ + RP +
Sbjct: 425 REAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM---EVGRPASLFLRL 481
Query: 247 ------TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAK 300
+F T+++ G + +A + + G P++V+YN LI G C +G++D A
Sbjct: 482 SHSGNRSFDTMVES----GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGAL 537
Query: 301 RMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIK 336
++++ ++LKG+ + T +++ G VGR EEA K
Sbjct: 538 KLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFK 573
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 43/264 (16%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASGPCAL------SCNAVLGVLVRANRVNLAKAIYDQV 167
I+ G+++ A HK + P +L S N +V + ++ KA D
Sbjct: 449 LIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESG--SILKAYRDLA 506
Query: 168 -VKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKG 223
+ PD+ +Y +I GFC+ G ++ A K+ + ++ + P+++TYNT+I+GL + G
Sbjct: 507 HFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVG 566
Query: 224 EMDGAMRVF---NRFAESK---------SCRPD--VVTFTTL-----------------I 252
+ A ++F + F S SCR +V F I
Sbjct: 567 REEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEI 626
Query: 253 DGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIK 312
+ K GE + AL + E+ + + + Y + GLC SG EA + S +R K I
Sbjct: 627 EQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKIL 686
Query: 313 DNVATNTSMLKGFCMVGRSEEAIK 336
+ ++ G C + + AI+
Sbjct: 687 VTPPSCVKLIHGLCKREQLDAAIE 710
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 140/567 (24%), Positives = 233/567 (41%), Gaps = 91/567 (16%)
Query: 26 PDSE-PLKKFSCYLTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAIT 84
PD+E L+ + LV +++ + + FF WA + N+ H S Y +
Sbjct: 78 PDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRR----NFQHDCSTYMTLI 133
Query: 85 DVL----LSHSLFSTADSLLRRSN-KLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG- 138
L L ++ T ++R + +S + S+ + A G + A+ F++AK
Sbjct: 134 RCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKC 193
Query: 139 -PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESAR 197
P + + N+V+ +L++ + +Y ++ E PD TY+ +I + K+G +SA
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253
Query: 198 KVFDEMR--------------------------------------CEPNAITYNTMIHGL 219
++FDEM+ C P TY +I GL
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313
Query: 220 CKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPN 279
K G +D A + PDVV L++ K G V+E N EM C P
Sbjct: 314 GKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPT 372
Query: 280 VVTYNA------------------------------------LIEGLCLSGNVDEAKRMM 303
VV+YN LI+G C + V++A ++
Sbjct: 373 VVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLL 432
Query: 304 SKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKI 363
+M KG A S++ R E A + KE+ ++ + Y+V++ + K
Sbjct: 433 EEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKC 492
Query: 364 GKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSY 423
GK SEAV + EM + P V ++NA+ +V + EA LL+ M GC + S+
Sbjct: 493 GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSH 552
Query: 424 SIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMI 483
+I++ G + G + E+ ++ SG D YN LLG + G E A + + +M
Sbjct: 553 NIILNGFART-GVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMK 611
Query: 484 DKSFLFNKDTYCTFVKELCAKGKVKEE 510
DK F ++ TY + L A G V E
Sbjct: 612 DKGFEYDAITYSSI---LDAVGNVDHE 635
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 123/259 (47%), Gaps = 7/259 (2%)
Query: 118 FGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEP 175
F + + WF K KA P + + ++ + NRV A + +++ ++ P
Sbjct: 384 FESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGF-PP 442
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAIT---YNTMIHGLCKKGEMDGAMRVF 232
Y ++I K E+A ++F E++ ++ Y MI K G++ A+ +F
Sbjct: 443 CPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLF 502
Query: 233 NRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCL 292
N +++ PDV + L+ G K G + EA + +++M+E GC+ ++ ++N ++ G
Sbjct: 503 NEM-KNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFAR 561
Query: 293 SGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKA 352
+G A M ++ GIK + T ++L F G EEA + M+EM +G + D
Sbjct: 562 TGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAIT 621
Query: 353 YSVIVNEYCKIGKPSEAVS 371
YS I++ + + VS
Sbjct: 622 YSSILDAVGNVDHEKDDVS 640
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 186/387 (48%), Gaps = 8/387 (2%)
Query: 131 FHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFC 188
F + K G P ++ ++ + + +++ A + +V+KE V+ ++ TY+ MI GF
Sbjct: 472 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV-SRVMKEEGVKHNLKTYSMMINGFV 530
Query: 189 KMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDV 245
K+ +A VF++M E P+ I YN +I C G MD A++ + + RP
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH-RPTT 589
Query: 246 VTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSK 305
TF +I GY+K G+++ +L M+ GC P V T+N LI GL +++A ++ +
Sbjct: 590 RTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDE 649
Query: 306 MRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGK 365
M L G+ N T T +++G+ VG + +A ++ + + G+D+D+ Y ++ CK G+
Sbjct: 650 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGR 709
Query: 366 PSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSI 425
A+++ +EM A+ + + +N + + EA L++ M + G P+ +Y+
Sbjct: 710 MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTS 769
Query: 426 VICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDK 485
I C G M + + M G + Y L+ G+ E AL +M
Sbjct: 770 FISA-CSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAM 828
Query: 486 SFLFNKDTYCTFVKELCAKGKVKEEYL 512
+K Y + L ++ + E Y+
Sbjct: 829 GIKPDKAVYHCLLTSLLSRASIAEAYI 855
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 188/400 (47%), Gaps = 10/400 (2%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRV--NLAKAIY-DQVVKEA 171
+ +G RGD+ A F + +A G S + L+ A V ++ +A+ + +KE
Sbjct: 316 VKFYGRRGDMHRARETFERMRARGITPTS--RIYTSLIHAYAVGRDMDEALSCVRKMKEE 373
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDE---MRCEPNAITYNTMIHGLCKKGEMDGA 228
+E + TY+ ++ GF K G E+A FDE + NA Y +I+ C+ M+ A
Sbjct: 374 GIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERA 433
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
R E + + + T++DGY+ + ++ L K ++E G P VVTY LI
Sbjct: 434 -EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLIN 492
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
G + +A + M+ +G+K N+ T + M+ GF + A ++MV GM
Sbjct: 493 LYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKP 552
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
DV Y+ I++ +C +G A+ ++EM R +P+ +F + + ++ +
Sbjct: 553 DVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF 612
Query: 409 KNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCE 468
M R GC P +++ +I GL + K +M+ E++ M +G + + Y ++ GY
Sbjct: 613 DMMRRCGCVPTVHTFNGLINGLVE-KRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 671
Query: 469 DGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
GD A + + ++ + TY +K C G+++
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQ 711
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 121/282 (42%), Gaps = 36/282 (12%)
Query: 236 AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
A K +P F ++ Y +RG++ A + M+ +G P Y +LI + +
Sbjct: 300 AFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRD 359
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSV 355
+DEA + KM+ +GI+ ++ T + ++ GF G +E A E L+ Y
Sbjct: 360 MDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGK 419
Query: 356 IVNEYCKIGKPSEAVSILREM------------------------------VAKRMK--- 382
I+ +C+ A +++REM V KR+K
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECG 479
Query: 383 --PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLV 440
P+V ++ + + K+ +A+ + + M G N +YS++I G K+K
Sbjct: 480 FTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 539
Query: 441 EELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDM 482
+ M++ G D +YN ++ +C G+ + A++TV +M
Sbjct: 540 -AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 190/399 (47%), Gaps = 18/399 (4%)
Query: 47 IKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLR----R 102
+K +P AL F+ Q + H Y+++ L F D +LR R
Sbjct: 56 LKEIEDPEEALSLFH-----QYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYR 110
Query: 103 SNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCA---LSCNAVLGVLVRANRVNL 159
+ + + L I +G G + AI FHK S C S N ++ VLV +
Sbjct: 111 NVRCRESLFMGLIQHYGKAGSVDKAIDVFHKI-TSFDCVRTIQSLNTLINVLVDNGELEK 169
Query: 160 AKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD---EMRCEPNAITYNTMI 216
AK+ +D K+ + P+ ++ +I+GF E+A KVFD EM +P+ +TYN++I
Sbjct: 170 AKSFFDGA-KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLI 228
Query: 217 HGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGC 276
LC+ +M A + + K RP+ VTF L+ G +GE EA M +M+ +GC
Sbjct: 229 GFLCRNDDMGKAKSLLEDMIK-KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGC 287
Query: 277 QPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIK 336
+P +V Y L+ L G +DEAK ++ +M+ + IK +V ++ C R EA +
Sbjct: 288 KPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYR 347
Query: 337 HMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLV 396
+ EM +G + Y ++++ +C+I +++L M+A R P+ ++F + L+
Sbjct: 348 VLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLI 407
Query: 397 AERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
L+ A +L+ M + S ++ ++ LC G
Sbjct: 408 KGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDG 446
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 166/328 (50%), Gaps = 5/328 (1%)
Query: 180 YTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
+ +I+ + K G V+ A VF ++ C + NT+I+ L GE++ A F+ A
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG-A 177
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNV 296
+ RP+ V+F LI G+ + + + A EM E QP+VVTYN+LI LC + ++
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 297 DEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVI 356
+AK ++ M K I+ N T ++KG C G EA K M +M RG + Y ++
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 357 VNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGC 416
+++ K G+ EA +L EM +R+KP V +N + L E ++ EA +L M GC
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC 357
Query: 417 SPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMAL 476
PN +Y ++I G C+++ ++++ML S H + C++ G + G+ + A
Sbjct: 358 KPNAATYRMMIDGFCRIED-FDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHAC 416
Query: 477 KTVYDMIDKSFLFNKDTYCTFVKELCAK 504
+ M K+ F + + +LC K
Sbjct: 417 FVLEVMGKKNLSFGSGAWQNLLSDLCIK 444
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 137/303 (45%), Gaps = 2/303 (0%)
Query: 200 FDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRG 259
+ EM + +Y+++I+ L K D ++ R ++ R F LI Y K G
Sbjct: 72 YQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQIL-RLVRYRNVRCRESLFMGLIQHYGKAG 130
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
V +A++ ++ C + + N LI L +G +++AK + ++ N +
Sbjct: 131 SVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFN 190
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
++KGF E A K EM+ + V Y+ ++ C+ +A S+L +M+ K
Sbjct: 191 ILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKK 250
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
R++P+ +F + + L + + EA L+ +M GC P ++Y I++ L K +GR+
Sbjct: 251 RIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK-RGRIDE 309
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
+ L+ M + D +YN L+ C + A + + +M K N TY +
Sbjct: 310 AKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMID 369
Query: 500 ELC 502
C
Sbjct: 370 GFC 372
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 115/251 (45%), Gaps = 1/251 (0%)
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
+EAL+ + QE G + + +Y++LI L S N D +++ +R + ++ + +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
++ + G ++AI ++ S +++ + ++N G+ +A S R+
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 382 KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVE 441
+P+ SFN + + + + E A + M M P+ ++Y+ +I LC+ M +
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCR-NDDMGKAK 241
Query: 442 ELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKEL 501
L+ M++ +A + L+ G C G+ A K ++DM + Y + +L
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 502 CAKGKVKEEYL 512
+G++ E L
Sbjct: 302 GKRGRIDEAKL 312
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 199/408 (48%), Gaps = 17/408 (4%)
Query: 54 HHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTA----DSLLRRSNKLSDF 109
H +L FFNWA++ + HP Y + D+ F A D + R+ ++S
Sbjct: 131 HQSLAFFNWATSRDDYDHKSPHP---YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIE 187
Query: 110 LASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQV 167
+ I + G A+H F++ + G P ++ + V+ L R R + A++ +D +
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL 247
Query: 168 VKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGE 224
+ EPDV YT ++RG+C+ G + A KVF EM+ EPN TY+ +I LC+ G+
Sbjct: 248 --KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQ 305
Query: 225 MDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
+ A VF +S C P+ +TF L+ + K G ++ L +M++ GC+P+ +TYN
Sbjct: 306 ISRAHDVFADMLDS-GCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
LIE C N++ A ++++ M K + N +T ++ + A + +M+
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEA 424
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA 404
+ + Y++++ + + + +EM K ++P+V+++ + + A
Sbjct: 425 KCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNA 484
Query: 405 VLLLKNMPRMGC-SPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSG 451
L K M C +P+ Y +V+ L + G+++ EELV M+Q G
Sbjct: 485 YKLFKEMVEEKCLTPSLSLYEMVLAQLRRA-GQLKKHEELVEKMIQKG 531
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 182/382 (47%), Gaps = 10/382 (2%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR 204
N ++ + + + +LA + D ++K VE + T+T +IR + + G+ A F+ M
Sbjct: 155 NEMIDLSGKVRQFDLAWHLID-LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 205 ---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
C P+ I ++ +I L +K A F+ + PDV+ +T L+ G+ + GE+
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR--FEPDVIVYTNLVRGWCRAGEI 271
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
EA KEM+ G +PNV TY+ +I+ LC G + A + + M G N T ++
Sbjct: 272 SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
++ GR+E+ ++ +M G + D Y+ ++ +C+ AV +L M+ K+
Sbjct: 332 MRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKC 391
Query: 382 KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVE 441
+ + S+FN +FR + +R + A + M C PN ++Y+I++ K +V
Sbjct: 392 EVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKS-TDMVL 450
Query: 442 ELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF-NKDTYCTFVKE 500
++ M + Y L+ +C G A K +M+++ L + Y + +
Sbjct: 451 KMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQ 510
Query: 501 LCAKGKVK--EEYLKRCVDNTL 520
L G++K EE +++ + L
Sbjct: 511 LRRAGQLKKHEELVEKMIQKGL 532
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 214/492 (43%), Gaps = 53/492 (10%)
Query: 27 DSEPLKKFSCYLTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDV 86
+ P+K + L P + +I N AL F +A P ++H Y +I
Sbjct: 36 EKPPIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPG---FTHNYDTYHSILFK 92
Query: 87 LLSHSLFSTADSL---LRRSN---KLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG-- 138
L F +SL LR S K + L + +G G ++ F + G
Sbjct: 93 LSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVK 152
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
S N +L VL++ R +L A++ + + P++FT +++ CK +ESA K
Sbjct: 153 RSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYK 212
Query: 199 VFDE---MRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
V DE M PN +TY T++ G +G+M+ A RV + + PD T+T L+DGY
Sbjct: 213 VLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLD-RGWYPDATTYTVLMDGY 271
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM--------- 306
K G EA M +M++ +PN VTY +I LC EA+ M +M
Sbjct: 272 CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDS 331
Query: 307 ----------------------RLKGIKDNVATNTSMLK----GFCMVGRSEEAIKHMKE 340
K +K+N + ++L C GR EA K E
Sbjct: 332 SLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE 391
Query: 341 MVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERK 400
+G + Y+ ++ C+ G+ +EA + +M ++ KP+ ++N + L
Sbjct: 392 F-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGN 450
Query: 401 LEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYN 460
++E V +L+ M +GC PN ++ I+ GL K+ G+ + ++VS + +G +D +
Sbjct: 451 VKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKL-GKEEDAMKIVSMAVMNG-KVDKESWE 508
Query: 461 CLLGGYCEDGDE 472
L + + D+
Sbjct: 509 LFLKKFAGELDK 520
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 156/333 (46%), Gaps = 5/333 (1%)
Query: 180 YTTMIRGFCKMGMVESARKVF---DEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
+ ++R + G ES+ ++F + + + + NT+++ L + D +F
Sbjct: 123 FIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSK 182
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNV 296
ES P++ T L+ K+ +++ A + E+ G PN+VTY ++ G G++
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 297 DEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVI 356
+ AKR++ +M +G + T T ++ G+C +GR EA M +M ++ + Y V+
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 357 VNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGC 416
+ CK K EA ++ EM+ + P S V L + K++EA L + M + C
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 417 SPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMAL 476
P+ S +I LCK +GR+ +L + G YN L+ G CE G+ A
Sbjct: 363 MPDNALLSTLIHWLCK-EGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAG 420
Query: 477 KTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ DM ++ N TY ++ L G VKE
Sbjct: 421 RLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKE 453
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 139/306 (45%), Gaps = 46/306 (15%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
+ + + RGD+ A + G P A + ++ + R + A + D + K
Sbjct: 230 TTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEK 289
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM-------------------------- 203
+EP+ TY MIR CK AR +FDEM
Sbjct: 290 NE-IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVD 348
Query: 204 ------------RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTL 251
C P+ +T+IH LCK+G + A ++F+ F K P ++T+ TL
Sbjct: 349 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF--EKGSIPSLLTYNTL 406
Query: 252 IDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
I G ++GE+ EA +M E+ C+PN TYN LIEGL +GNV E R++ +M G
Sbjct: 407 IAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGC 466
Query: 312 KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVS 371
N T + +G +G+ E+A+K + V G +D +++ + + ++ G+ + V
Sbjct: 467 FPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG-KVDKESWELFLKKFA--GELDKGVL 523
Query: 372 ILREMV 377
L+E++
Sbjct: 524 PLKELL 529
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 188/389 (48%), Gaps = 14/389 (3%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA-----LVEPDVFTYTTMIRGFCKMGMV 193
P ++ ++ L ++ RV+ A +++Q+ + +++ D + T+I G CK+G +
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 194 ESARKVFDEM----RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
+ A ++ M RC PNA+TYN +I G C+ G+++ A V +R E + +P+VVT
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE-IKPNVVTVN 445
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
T++ G + + A+ +M+++G + NVVTY LI C NV++A KM
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
G + +++ G C V R +AI+ ++++ G LD+ AY++++ +C +
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKV 565
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICG 429
+L +M + KP ++N + + E +++ M G P +Y VI
Sbjct: 566 YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
Query: 430 LCKVKGRMQLVEELVSSM-LQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFL 488
C V G + +L M L S N + +YN L+ + + G+ AL +M K
Sbjct: 626 YCSV-GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVR 684
Query: 489 FNKDTYCTFVKELCAKGKVKEEYLKRCVD 517
N +TY K C K + E L + +D
Sbjct: 685 PNVETYNALFK--CLNEKTQGETLLKLMD 711
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 166/329 (50%), Gaps = 12/329 (3%)
Query: 165 DQVVK--EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---------CEPNAITYN 213
D V+K E + PDV T +I CK V+ A +VF++MR + ++I +N
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFN 374
Query: 214 TMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQE 273
T+I GLCK G + A + R + C P+ VT+ LIDGY + G+++ A + M+E
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 274 QGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEE 333
+PNVVT N ++ G+C ++ A M +G+K NV T +++ C V E+
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 334 AIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFR 393
A+ ++M+ G D K Y +++ C++ + +A+ ++ ++ + ++N +
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 394 VLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHN 453
+ + E+ +L +M + G P+ ++Y+ +I K K + VE ++ M + G +
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD-FESVERMMEQMREDGLD 613
Query: 454 LDATMYNCLLGGYCEDGDEEMALKTVYDM 482
T Y ++ YC G+ + ALK DM
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 149/277 (53%), Gaps = 6/277 (2%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ N ++G + R + +N+A + + KE V+ +V TY T+I C + VE A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG-VKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+++M C P+A Y +I GLC+ A+RV + E D++ + LI +
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG-GFSLDLLAYNMLIGLF 556
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+ ++ + +M+++G +P+ +TYN LI + + +RMM +MR G+ V
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEM-VSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
T +++ +C VG +EA+K K+M + ++ + Y++++N + K+G +A+S+
Sbjct: 617 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
EM K ++P+V ++NA+F+ L + + E + L+ M
Sbjct: 677 EMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 189/420 (45%), Gaps = 33/420 (7%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVV-KEAL 172
I FG G + ++ + + ++ + N V+ VL+R V+ A + D+++ KE++
Sbjct: 158 LIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESV 217
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKV-----FDEMRCEPNAITYNTMIHGLCKKGEMDG 227
P+ T ++ K ++ + + F PN++ I LCK +
Sbjct: 218 FPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANT 277
Query: 228 AMRVFNRFAESKSCRP-DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
A + + ++K+ P + F L+ + ++ + + +M E +P+VVT L
Sbjct: 278 AWDILSDLMKNKT--PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGIL 335
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKD-NVATNTS-----MLKGFCMVGRSEEAIKHMKE 340
I LC S VDEA + +MR K D NV S ++ G C VGR +EA +E
Sbjct: 336 INTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEA----EE 391
Query: 341 MVSRGMDLDVK------AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRV 394
++ R M L+ + Y+ +++ YC+ GK A ++ M +KP+V + N +
Sbjct: 392 LLVR-MKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 395 LVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI---CGLCKVKGRMQLVEELVSSMLQSG 451
+ L AV+ +M + G N ++Y +I C + V+ M E+ ML++G
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK----MLEAG 506
Query: 452 HNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
+ DA +Y L+ G C+ + A++ V + + F + Y + C K ++ Y
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVY 566
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 8/227 (3%)
Query: 122 GDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFT 179
++ A++W+ K +G P A A++ L + R + A + +++ KE D+
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL-KEGGFSLDLLA 548
Query: 180 YTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
Y +I FC E ++ +M E P++ITYNT+I K + + R+ +
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQ-EQGCQPNVVTYNALIEGLCLSGN 295
E P V T+ +ID Y GE+ EAL K+M PN V YN LI GN
Sbjct: 609 ED-GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
+A + +M++K ++ NV T ++ K + E +K M EMV
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 152/358 (42%), Gaps = 18/358 (5%)
Query: 166 QVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE-PNAITYNTMIHGLCKKGE 224
++ KE + + +IR F +MGMV + V++ + N+ N ++ L + G
Sbjct: 141 EIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGL 200
Query: 225 MDGAMRVFNRFAESKSCRPD--VVTFTTLIDGYSKRGEVQEALNCM-KEMQEQGCQPNVV 281
+D A +V + + +S P + L + + +R +E + + G PN V
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 282 TYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLK--GFCM-VGRSEEAIKHM 338
I LC + + A ++S + ++L G M + R + + M
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 339 KEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKR------MKPSVSSFNAVF 392
E+ R DV +++N CK + EA+ + +M KR +K FN +
Sbjct: 321 DEVKIRP---DVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLI 377
Query: 393 RVLVAERKLEEAVLLLKNMP-RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSG 451
L +L+EA LL M C PN ++Y+ +I G C+ G+++ +E+VS M +
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA-GKLETAKEVVSRMKEDE 436
Query: 452 HNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ N ++GG C MA+ DM + N TY T + C+ V++
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 147/263 (55%), Gaps = 4/263 (1%)
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAM 229
++ DV T +I CK +V A +V M+ PN +TY+++I GLCK G + A
Sbjct: 44 IKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAE 103
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
R + +SK P+V+TF+ LID Y+KRG++ + + K M + PNV TY++LI G
Sbjct: 104 RRLHEM-DSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYG 162
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
LC+ VDEA +M+ M KG NV T +++ GF R ++ IK + +M RG+ +
Sbjct: 163 LCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAAN 222
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
+ + ++ Y + GK A+ + M + + P++ S+N V L A ++E+A+ +
Sbjct: 223 TVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFE 282
Query: 410 NMPRMGCSPNFLSYSIVICGLCK 432
+M + + ++Y+I+I G+CK
Sbjct: 283 HMQKTRNDLDIITYTIMIHGMCK 305
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 160/332 (48%), Gaps = 5/332 (1%)
Query: 111 ASKFINAFGDRGDIRGAIHWFHKAKASG-PCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
AS +N F I+ A++ + + G + + +L + NR+ + + +K
Sbjct: 16 ASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMK 75
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMD 226
+ + P+V TY+++I G CK G + A + EM + PN IT++ +I K+G++
Sbjct: 76 DRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLS 135
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
V+ + S P+V T+++LI G V EA+ + M +GC PNVVTY+ L
Sbjct: 136 KVDSVYKMMIQM-SIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 194
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
G S VD+ +++ M +G+ N + +++KG+ G+ + A+ M S G+
Sbjct: 195 ANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGL 254
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
++++Y++++ G+ +A+S M R + ++ + + ++EA
Sbjct: 255 IPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYD 314
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQ 438
L + P+F +Y+I+I L + R +
Sbjct: 315 LFYKLKFKRVEPDFKAYTIMIAELNRAGMRTE 346
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 135/268 (50%), Gaps = 7/268 (2%)
Query: 112 SKFINAFGDRGDIRGAIHWFHK--AKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
S I G + A H+ +K P ++ +A++ + +++ ++Y +++
Sbjct: 87 SSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQ 146
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMD 226
+ ++P+VFTY+++I G C V+ A K+ D M C PN +TY+T+ +G K +D
Sbjct: 147 MS-IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 205
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
+++ + + + + V+ TLI GY + G++ AL M G PN+ +YN +
Sbjct: 206 DGIKLLDDMPQ-RGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIV 264
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
+ GL +G V++A M+ ++ T T M+ G C +EA ++ + +
Sbjct: 265 LAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRV 324
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILR 374
+ D KAY++++ E + G +EA ++ R
Sbjct: 325 EPDFKAYTIMIAELNRAGMRTEADALNR 352
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 138/282 (48%), Gaps = 37/282 (13%)
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEA------------KR-------------- 301
M +M + G +P++VT ++L+ G CLS ++ +A KR
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 302 ---------MMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKA 352
++ +M+ +GI NV T +S++ G C GR +A + + EM S+ ++ +V
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 353 YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
+S +++ Y K GK S+ S+ + M+ + P+V +++++ L +++EA+ +L M
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 413 RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDE 472
GC+PN ++YS + G K R+ +L+ M Q G + N L+ GY + G
Sbjct: 181 SKGCTPNVVTYSTLANGFFK-SSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKI 239
Query: 473 EMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLKR 514
++AL M + N +Y + L A G+V E+ L R
Sbjct: 240 DLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV-EKALSR 280
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 202/442 (45%), Gaps = 49/442 (11%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
IN F RG++ A F + G P ++ + ++ +A + + ++ Q + +
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGA 228
V+ DV +++ I + K G + +A V+ M C+ PN +TY +I GLC+ G + A
Sbjct: 352 -VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
++ + + + P +VT+++LIDG+ K G ++ ++M + G P+VV Y L++
Sbjct: 411 FGMYGQILK-RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
GL G + A R KM + I+ NV S++ G+C + R +EA+K + M G+
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 349 DVKAY------SVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLE 402
DV + S++ + +CK KP+ + + M ++ ++ N V +L ++E
Sbjct: 530 DVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 589
Query: 403 EAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELV------------------ 444
+A N+ P+ ++Y+ +ICG C ++ R+ E +
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLR-RLDEAERIFELLKVTPFGPNTVTLTIL 648
Query: 445 -----------------SSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSF 487
S M + G +A Y CL+ + + D E + K +M +K
Sbjct: 649 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 708
Query: 488 LFNKDTYCTFVKELCAKGKVKE 509
+ +Y + LC +G+V E
Sbjct: 709 SPSIVSYSIIIDGLCKRGRVDE 730
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 210/451 (46%), Gaps = 40/451 (8%)
Query: 53 PHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRR--SNKLSDFL 110
P+ AL +F WA +P+ Y+ I VL+ + +F AD + +N+ DF
Sbjct: 83 PNSALKYFRWAEISGKDPSFYT--------IAHVLIRNGMFDVADKVFDEMITNRGKDF- 133
Query: 111 ASKFINAFGDR-----------------GDIRGAIHWFHKAKASGPCAL--SCNAVLGVL 151
+ + DR G + A+ F + G S +L L
Sbjct: 134 --NVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSL 191
Query: 152 VRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRG-FCKMGMVESA---RKVFDEMRCEP 207
+ ++RV+L +D++ + + V + ++ FCK G V A ++ E
Sbjct: 192 IGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGFRV 250
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
++ N ++ GL +++ A R+ + + P+VVTF TLI+G+ KRGE+ A +
Sbjct: 251 GIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPA-PNVVTFCTLINGFCKRGEMDRAFDL 308
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM 327
K M+++G +P+++ Y+ LI+G +G + ++ S+ KG+K +V +S + +
Sbjct: 309 FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVK 368
Query: 328 VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSS 387
G A K M+ +G+ +V Y++++ C+ G+ EA + +++ + M+PS+ +
Sbjct: 369 SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428
Query: 388 FNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM 447
++++ L L ++M +MG P+ + Y +++ GL K +G M M
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK-QGLMLHAMRFSVKM 487
Query: 448 LQSGHNLDATMYNCLLGGYCEDGDEEMALKT 478
L L+ ++N L+ G+C + ALK
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 11/286 (3%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIR------GFCKMGMVESARK 198
N+++ R NR + A ++ +++ ++PDV T+TT++R FCK +
Sbjct: 500 NSLIDGWCRLNRFDEALKVF-RLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQ 558
Query: 199 VFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+FD M + + N +IH L K ++ A + FN E K PD+VT+ T+I GY
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK-MEPDIVTYNTMICGY 617
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+ EA + ++ PN VT LI LC + ++D A RM S M KG K N
Sbjct: 618 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 677
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T ++ F E + K +EM +G+ + +YS+I++ CK G+ EA +I +
Sbjct: 678 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFL 421
+ ++ P V ++ + R +L EA LL ++M R G P+ L
Sbjct: 738 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 192/476 (40%), Gaps = 85/476 (17%)
Query: 67 QPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRG 126
+P+ YS Y + + H LFS A L + KL + S I+ + GD+
Sbjct: 318 EPDLIAYSTLIDGYFKAGMLGMGHKLFSQA---LHKGVKLDVVVFSSTIDVYVKSGDLAT 374
Query: 127 AIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMI 184
A + + G P ++ ++ L + R+ A +Y Q++K + EP + TY+++I
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM-EPSIVTYSSLI 433
Query: 185 RGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRV---------- 231
GFCK G + S ++++M P+ + Y ++ GL K+G M AMR
Sbjct: 434 DGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIR 493
Query: 232 ---------------FNRFAES---------KSCRPDVVTFTTLI------DGYSKRGEV 261
NRF E+ +PDV TFTT++ D + K +
Sbjct: 494 LNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP 553
Query: 262 QEALNCMKEMQ-----------------------------------EQGCQPNVVTYNAL 286
L MQ E +P++VTYN +
Sbjct: 554 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 613
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
I G C +DEA+R+ +++ N T T ++ C + AI+ M +G
Sbjct: 614 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 673
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
+ Y +++ + K + + EM K + PS+ S++ + L +++EA
Sbjct: 674 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 733
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCL 462
+ P+ ++Y+I+I G CKV GR+ L ML++G D + L
Sbjct: 734 IFHQAIDAKLLPDVVAYAILIRGYCKV-GRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 5/159 (3%)
Query: 133 KAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGM 192
K GP ++ ++ VL + N ++ A ++ ++ E +P+ TY ++ F K
Sbjct: 634 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF-SIMAEKGSKPNAVTYGCLMDWFSKSVD 692
Query: 193 VESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
+E + K+F+EM+ P+ ++Y+ +I GLCK+G +D A +F++ ++K PDVV +
Sbjct: 693 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK-LLPDVVAYA 751
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
LI GY K G + EA + M G +P+ + AL E
Sbjct: 752 ILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSE 790
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 132/331 (39%), Gaps = 18/331 (5%)
Query: 195 SARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFA-------------ESKSC 241
SA K F ++ T+ H L + G D A +VF+ +S
Sbjct: 85 SALKYFRWAEISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSL 144
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKR 301
DV F L++ + G V +AL + G + ++ L S VD
Sbjct: 145 DADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIAD 202
Query: 302 MMSKMRLKGIK-DNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEY 360
K+ GI+ V+ + +L G +A+ + ++ RG + + + + ++
Sbjct: 203 HFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG- 261
Query: 361 CKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNF 420
+ + A +L ++ P+V +F + +++ A L K M + G P+
Sbjct: 262 LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 421 LSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVY 480
++YS +I G K G + + +L S L G LD +++ + Y + GD A
Sbjct: 322 IAYSTLIDGYFKA-GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYK 380
Query: 481 DMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
M+ + N TY +K LC G++ E +
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 140/541 (25%), Positives = 242/541 (44%), Gaps = 43/541 (7%)
Query: 3 VAVRKATVKPSSIVTTITSL-LQTPDSEPLKKFSCYLTPSLVTQVIKNTHN-PHHALFFF 60
VA + + +P I+ + L L+ L +FS LT L+++V++ + P AL F+
Sbjct: 19 VAKKFSNPEPEDILFSALCLNLRQRRWNTLHQFSSSLTNPLISRVLREFRSSPKLALEFY 78
Query: 61 NWA--SNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLR-----RSNKLSDF---- 109
NW SN N SC + +L+ F A S++ KLS
Sbjct: 79 NWVLRSNTVAKSEN-RFEASC--VMIHLLVGSRRFDDALSIMANLMSVEGEKLSPLHVLS 135
Query: 110 --------------LASKFINAFGDRGDIRGAIHWFHKAKASGPCA--LSCNAVLGVLVR 153
+ + A GD +GA + +A G C + N +G L+
Sbjct: 136 GLIRSYQACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLN 195
Query: 154 ANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM-RC--EPNAI 210
N ++ +Y ++ VE +V T+ +I FCK + A VF M +C PN +
Sbjct: 196 VNEIDRFWKVYKEMDSLGYVE-NVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVV 254
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFA--ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM 268
++N MI G CK G+M A+++ + P+ VT+ ++I+G+ K G + A
Sbjct: 255 SFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIR 314
Query: 269 KEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMV 328
+M + G N TY AL++ +G+ DEA R+ +M KG+ N S++ M
Sbjct: 315 GDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFME 374
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSF 388
G E A+ +++M S+ M +D +++V C+ G EAV R++ K++ +
Sbjct: 375 GDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCH 434
Query: 389 NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
N + V ++KL A +L +M G S + +S+ +I G K +G+++ E+ M+
Sbjct: 435 NTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLK-EGKLERALEIYDGMI 493
Query: 449 QSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
+ + +YN ++ G + G A V M K + TY T + E G V+
Sbjct: 494 KMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIV----TYNTLLNESLKTGNVE 549
Query: 509 E 509
E
Sbjct: 550 E 550
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 170/361 (47%), Gaps = 43/361 (11%)
Query: 122 GDIRGAIHWFHK-AKASG----PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPD 176
GD+R A+ K SG P A++ N+V+ +A R++LA+ I +VK V+ +
Sbjct: 267 GDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSG-VDCN 325
Query: 177 VFTYTTMIRGFCKMGMVESARKVFDEMRCEP---NAITYNTMIHGLCKKGEMDGAMRVFN 233
TY ++ + + G + A ++ DEM + N + YN++++ L +G+++GAM V
Sbjct: 326 ERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVL- 384
Query: 234 RFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
R SK+ + D T ++ G + G V+EA+ +++ E+ ++V +N L+
Sbjct: 385 RDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRD 444
Query: 294 GNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVS---------- 343
+ A +++ M ++G+ + + +++ G+ G+ E A++ M+
Sbjct: 445 KKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIY 504
Query: 344 ---------RGMD------------LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMK 382
RGM D+ Y+ ++NE K G EA IL +M + +
Sbjct: 505 NSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGE 564
Query: 383 PSVS--SFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLV 440
SVS +FN + L E+A +LK M G P+ ++Y +I K + + ++V
Sbjct: 565 KSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVV 624
Query: 441 E 441
E
Sbjct: 625 E 625
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 165 DQVVKEALVEP---DVFTYTTMIRGFCKMGMVESARKVFD---EMRCEPNAITYNTMIHG 218
DQ++ LV+ D ++ T+I G+ K G +E A +++D +M N + YN++++G
Sbjct: 451 DQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNG 510
Query: 219 LCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQP 278
L K+G M GA E K D+VT+ TL++ K G V+EA + + +MQ+Q +
Sbjct: 511 LSKRG-MAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEK 565
Query: 279 NV--VTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIK 336
+V VT+N +I LC G+ ++AK ++ M +G+ + T +++ F E+ ++
Sbjct: 566 SVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVE 625
Query: 337 HMKEMVSRGMDLDVKAYSVIV 357
++ +G+ Y IV
Sbjct: 626 LHDYLILQGVTPHEHIYLSIV 646
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 85/172 (49%), Gaps = 3/172 (1%)
Query: 141 ALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVF 200
A+S ++ ++ ++ A IYD ++K ++ Y +++ G K GM +A V
Sbjct: 466 AISFGTLIDGYLKEGKLERALEIYDGMIKMNKT-SNLVIYNSIVNGLSKRGMAGAAEAVV 524
Query: 201 DEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRP-DVVTFTTLIDGYSKRG 259
+ M + + +TYNT+++ K G ++ A + ++ + + +VTF +I+ K G
Sbjct: 525 NAMEIK-DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFG 583
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
++A +K M E+G P+ +TY LI + ++ + + L+G+
Sbjct: 584 SYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGV 635
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 166 QVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEP-----NAITYNTMIHGLC 220
+ V A+ D+ TY T++ K G VE A + +M+ + + +T+N MI+ LC
Sbjct: 521 EAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLC 580
Query: 221 KKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNV 280
K G + A V +F + PD +T+ TLI +SK ++ + + QG P+
Sbjct: 581 KFGSYEKAKEVL-KFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHE 639
Query: 281 VTYNALIEGL 290
Y +++ L
Sbjct: 640 HIYLSIVRPL 649
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 188/389 (48%), Gaps = 14/389 (3%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA-----LVEPDVFTYTTMIRGFCKMGMV 193
P ++ ++ L ++ RV+ A +++Q+ + +++ D + T+I G CK+G +
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 194 ESARKVFDEM----RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
+ A ++ M RC PNA+TYN +I G C+ G+++ A V +R E + +P+VVT
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE-IKPNVVTVN 445
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
T++ G + + A+ +M+++G + NVVTY LI C NV++A KM
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
G + +++ G C V R +AI+ ++++ G LD+ AY++++ +C +
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKV 565
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICG 429
+L +M + KP ++N + + E +++ M G P +Y VI
Sbjct: 566 YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
Query: 430 LCKVKGRMQLVEELVSSM-LQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFL 488
C V G + +L M L S N + +YN L+ + + G+ AL +M K
Sbjct: 626 YCSV-GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVR 684
Query: 489 FNKDTYCTFVKELCAKGKVKEEYLKRCVD 517
N +TY K C K + E L + +D
Sbjct: 685 PNVETYNALFK--CLNEKTQGETLLKLMD 711
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 175/349 (50%), Gaps = 15/349 (4%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVK--EALVEPDVFTYTTMIRGFCKMGMVESARKVFDE 202
NA+L L R ++ + D V+K E + PDV T +I CK V+ A +VF++
Sbjct: 298 NALLSCLGRNMDIS---RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQ 354
Query: 203 MR---------CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLID 253
MR + ++I +NT+I GLCK G + A + R + C P+ VT+ LID
Sbjct: 355 MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLID 414
Query: 254 GYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKD 313
GY + G+++ A + M+E +PNVVT N ++ G+C ++ A M +G+K
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 314 NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL 373
NV T +++ C V E+A+ ++M+ G D K Y +++ C++ + +A+ ++
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 374 REMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKV 433
++ + ++N + + + E+ +L +M + G P+ ++Y+ +I K
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 434 KGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDM 482
K + VE ++ M + G + T Y ++ YC G+ + ALK DM
Sbjct: 595 KD-FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 157/293 (53%), Gaps = 6/293 (2%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ N ++G + R + +N+A + + KE V+ +V TY T+I C + VE A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG-VKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+++M C P+A Y +I GLC+ A+RV + E D++ + LI +
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG-GFSLDLLAYNMLIGLF 556
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+ ++ + +M+++G +P+ +TYN LI + + +RMM +MR G+ V
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEM-VSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
T +++ +C VG +EA+K K+M + ++ + Y++++N + K+G +A+S+
Sbjct: 617 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI 427
EM K ++P+V ++NA+F+ L + + E + L+ M C PN ++ I++
Sbjct: 677 EMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 188/419 (44%), Gaps = 31/419 (7%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVV-KEAL 172
I FG G + ++ + + ++ + N V+ VL+R V+ A + D+++ KE++
Sbjct: 158 LIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESV 217
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKV-----FDEMRCEPNAITYNTMIHGLCKKGEMDG 227
P+ T ++ K ++ + + F PN++ I LCK +
Sbjct: 218 FPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANT 277
Query: 228 AMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
A + + ++K+ + F L+ + ++ + + +M E +P+VVT LI
Sbjct: 278 AWDILSDLMKNKTPL-EAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILI 336
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKD-NVATNTS-----MLKGFCMVGRSEEAIKHMKEM 341
LC S VDEA + +MR K D NV S ++ G C VGR +EA +E+
Sbjct: 337 NTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEA----EEL 392
Query: 342 VSRGMDLDVK------AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVL 395
+ R M L+ + Y+ +++ YC+ GK A ++ M +KP+V + N + +
Sbjct: 393 LVR-MKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGM 451
Query: 396 VAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI---CGLCKVKGRMQLVEELVSSMLQSGH 452
L AV+ +M + G N ++Y +I C + V+ M E+ ML++G
Sbjct: 452 CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK----MLEAGC 507
Query: 453 NLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
+ DA +Y L+ G C+ + A++ V + + F + Y + C K ++ Y
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVY 566
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 152/360 (42%), Gaps = 22/360 (6%)
Query: 166 QVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE-PNAITYNTMIHGLCKKGE 224
++ KE + + +IR F +MGMV + V++ + N+ N ++ L + G
Sbjct: 141 EIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGL 200
Query: 225 MDGAMRVFNRFAESKSCRPD--VVTFTTLIDGYSKRGEVQEALNCM-KEMQEQGCQPNVV 281
+D A +V + + +S P + L + + +R +E + + G PN V
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 282 TYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM-----VGRSEEAIK 336
I LC + + A ++S + ++L C+ + R + +
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLS--CLGRNMDISRMNDLVL 318
Query: 337 HMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKR------MKPSVSSFNA 390
M E+ R DV +++N CK + EA+ + +M KR +K FN
Sbjct: 319 KMDEVKIRP---DVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNT 375
Query: 391 VFRVLVAERKLEEAVLLLKNMP-RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
+ L +L+EA LL M C PN ++Y+ +I G C+ G+++ +E+VS M +
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA-GKLETAKEVVSRMKE 434
Query: 450 SGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ N ++GG C MA+ DM + N TY T + C+ V++
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 6/185 (3%)
Query: 127 AIHWFHKAKASGPCA--LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMI 184
AI K K G L+ N ++G+ N + + KE +PD TY T+I
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG-KKPDSITYNTLI 588
Query: 185 RGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSC 241
F K ES ++ ++MR +P TY +I C GE+D A+++F
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKR 301
P+ V + LI+ +SK G +AL+ +EM+ + +PNV TYNAL + L + +
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK 708
Query: 302 MMSKM 306
+M +M
Sbjct: 709 LMDEM 713
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 188/389 (48%), Gaps = 14/389 (3%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA-----LVEPDVFTYTTMIRGFCKMGMV 193
P ++ ++ L ++ RV+ A +++++ + +++ D + T+I G CK+G +
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 194 ESARKVFDEM----RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
+ A ++ M RC PNA+TYN +I G C+ G+++ A V +R E + +P+VVT
Sbjct: 387 KEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE-IKPNVVTVN 445
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
T++ G + + A+ +M+++G + NVVTY LI C NV++A KM
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
G + +++ G C V R +AI+ ++++ G LD+ AY++++ +C +
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKV 565
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICG 429
+L +M + KP ++N + + E +++ M G P +Y VI
Sbjct: 566 YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
Query: 430 LCKVKGRMQLVEELVSSM-LQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFL 488
C V G + +L M L S N + +YN L+ + + G+ AL +M K
Sbjct: 626 YCSV-GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVR 684
Query: 489 FNKDTYCTFVKELCAKGKVKEEYLKRCVD 517
N +TY K C K + E L + +D
Sbjct: 685 PNVETYNALFK--CLNEKTQGETLLKLMD 711
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 175/349 (50%), Gaps = 15/349 (4%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVK--EALVEPDVFTYTTMIRGFCKMGMVESARKVFDE 202
NA+L L R ++ + D V+K E + PDV T +I CK V+ A +VF++
Sbjct: 298 NALLSCLGRNMDIS---RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEK 354
Query: 203 MR---------CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLID 253
MR + ++I +NT+I GLCK G + A + R + C P+ VT+ LID
Sbjct: 355 MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLID 414
Query: 254 GYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKD 313
GY + G+++ A + M+E +PNVVT N ++ G+C ++ A M +G+K
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 314 NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL 373
NV T +++ C V E+A+ ++M+ G D K Y +++ C++ + +A+ ++
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 374 REMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKV 433
++ + ++N + + + E+ +L +M + G P+ ++Y+ +I K
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 434 KGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDM 482
K + VE ++ M + G + T Y ++ YC G+ + ALK DM
Sbjct: 595 KD-FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 157/293 (53%), Gaps = 6/293 (2%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ N ++G + R + +N+A + + KE V+ +V TY T+I C + VE A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG-VKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+++M C P+A Y +I GLC+ A+RV + E D++ + LI +
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG-GFSLDLLAYNMLIGLF 556
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+ ++ + +M+++G +P+ +TYN LI + + +RMM +MR G+ V
Sbjct: 557 CDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEM-VSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
T +++ +C VG +EA+K K+M + ++ + Y++++N + K+G +A+S+
Sbjct: 617 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI 427
EM K ++P+V ++NA+F+ L + + E + L+ M C PN ++ I++
Sbjct: 677 EMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 188/419 (44%), Gaps = 31/419 (7%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVV-KEAL 172
I FG G + ++ + + ++ + N V+ VL+R V+ A + D+++ KE++
Sbjct: 158 LIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESV 217
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKV-----FDEMRCEPNAITYNTMIHGLCKKGEMDG 227
P+ T ++ K ++ + + F PN++ I LCK +
Sbjct: 218 FPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANA 277
Query: 228 AMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
A + + ++K+ + F L+ + ++ + + +M E +P+VVT LI
Sbjct: 278 AWDILSDLMKNKTPL-EAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILI 336
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKD-NVATNTS-----MLKGFCMVGRSEEAIKHMKEM 341
LC S VDEA + KMR K D NV S ++ G C VGR +EA +E+
Sbjct: 337 NTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEA----EEL 392
Query: 342 VSRGMDLDVK------AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVL 395
+ R M L+ + Y+ +++ YC+ GK A ++ M +KP+V + N + +
Sbjct: 393 LVR-MKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGM 451
Query: 396 VAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI---CGLCKVKGRMQLVEELVSSMLQSGH 452
L AV+ +M + G N ++Y +I C + V+ M E+ ML++G
Sbjct: 452 CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK----MLEAGC 507
Query: 453 NLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
+ DA +Y L+ G C+ + A++ V + + F + Y + C K ++ Y
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVY 566
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 152/360 (42%), Gaps = 22/360 (6%)
Query: 166 QVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE-PNAITYNTMIHGLCKKGE 224
++ KE + V +IR F +MGMV + V++ + N+ N ++ L + G
Sbjct: 141 EIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGL 200
Query: 225 MDGAMRVFNRFAESKSCRPD--VVTFTTLIDGYSKRGEVQEALNCM-KEMQEQGCQPNVV 281
+D A +V + + +S P + L + + R +E + + G PN V
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSV 260
Query: 282 TYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM-----VGRSEEAIK 336
I LC + + A ++S + ++L C+ + R + +
Sbjct: 261 WLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLS--CLGRNMDISRMNDLVL 318
Query: 337 HMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKR------MKPSVSSFNA 390
M E+ R DV +++N CK + EA+ + +M KR +K FN
Sbjct: 319 KMDEVKIRP---DVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNT 375
Query: 391 VFRVLVAERKLEEAVLLLKNMP-RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
+ L +L+EA LL M C+PN ++Y+ +I G C+ G+++ +E+VS M +
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRA-GKLETAKEVVSRMKE 434
Query: 450 SGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ N ++GG C MA+ DM + N TY T + C+ V++
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 6/185 (3%)
Query: 127 AIHWFHKAKASGPCA--LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMI 184
AI K K G L+ N ++G+ N + + KE +PD TY T+I
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEG-KKPDSITYNTLI 588
Query: 185 RGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSC 241
F K ES ++ ++MR +P TY +I C GE+D A+++F
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKR 301
P+ V + LI+ +SK G +AL+ +EM+ + +PNV TYNAL + L + +
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK 708
Query: 302 MMSKM 306
+M +M
Sbjct: 709 LMDEM 713
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 199/437 (45%), Gaps = 8/437 (1%)
Query: 79 CYAAITDVLLSHSL---FSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAK 135
C + + ++L H L + +L R L+ + S FI + G K
Sbjct: 239 CISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMK 298
Query: 136 ASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMV 193
G P ++ + L +A + A ++ ++ K + D + +++I GFCK+G
Sbjct: 299 HYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKL-KLFGISQDSVSVSSVIDGFCKVGKP 357
Query: 194 ESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLID 253
E A K+ R PN Y++ + +C G+M A +F E PD V +TT+ID
Sbjct: 358 EEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFE-LGLLPDCVCYTTMID 416
Query: 254 GYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKD 313
GY G +A + + G P++ T LI G++ +A+ + M+ +G+K
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 314 NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL 373
+V T +++ G+ + + + + EM S G+ DV Y+++++ G EA I+
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 374 REMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKV 433
E++ + PS +F V +EA +L M + P+ ++ S ++ G CK
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 434 KGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDT 493
+ RM+ L + +L +G D +YN L+ GYC GD E A + + M+ + L N+ T
Sbjct: 597 Q-RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNEST 655
Query: 494 YCTFVKELCAKGKVKEE 510
+ V L K V E
Sbjct: 656 HHALVLGLEGKRFVNSE 672
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 149/292 (51%), Gaps = 8/292 (2%)
Query: 160 AKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM--RCEPNAITYNTMIH 217
A I+ ++ + L+ PD YTTMI G+C +G + A + F + P ++T +T++
Sbjct: 392 ASTIFQEIFELGLL-PDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI 450
Query: 218 GLCKK-GEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGC 276
G C + G + A VF R +++ + DVVT+ L+ GY K ++ + + EM+ G
Sbjct: 451 GACSRFGSISDAESVF-RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGI 509
Query: 277 QPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIK 336
P+V TYN LI + + G +DEA ++S++ +G + T ++ GF G +EA
Sbjct: 510 SPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFI 569
Query: 337 HMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLV 396
M M DV S +++ YCK + +A+ + +++ +KP V +N +
Sbjct: 570 LWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYC 629
Query: 397 AERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
+ +E+A L+ M + G PN ++ ++ GL +G+ + E +SML
Sbjct: 630 SVGDIEKACELIGLMVQRGMLPNESTHHALVLGL---EGKRFVNSETHASML 678
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 162/364 (44%), Gaps = 9/364 (2%)
Query: 152 VRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEP---N 208
+R +VN+A + +V + + P ++++ ++ +E AR+ + M N
Sbjct: 212 IRERKVNMALKLTYKVDQFGIF-PSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLN 270
Query: 209 AITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM 268
A + I C G D + + RPD+V FT ID K G ++EA + +
Sbjct: 271 AAVLSLFIRKYCSDGYFDKGWELLMGM-KHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL 329
Query: 269 KEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMV 328
+++ G + V+ +++I+G C G +EA +++ RL+ N+ +S L C
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICST 386
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSF 388
G A +E+ G+ D Y+ +++ YC +G+ +A ++ PS+++
Sbjct: 387 GDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTS 446
Query: 389 NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
+ + +A + +NM G + ++Y+ ++ G K ++ V EL+ M
Sbjct: 447 TILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH-QLNKVFELIDEMR 505
Query: 449 QSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
+G + D YN L+ G + A + + ++I + F+ + + + +G +
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQ 565
Query: 509 EEYL 512
E ++
Sbjct: 566 EAFI 569
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
F+ LID + +V AL ++ + G P+ +L++ + ++ A+ + M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP 366
+G N A + ++ +C G ++ + + M G+ D+ A++V +++ CK G
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 367 SEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
EA S+L ++ + S ++V K EEA+ L+ + PN YS
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSF 379
Query: 427 ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALK 477
+ +C G M + + + G D Y ++ GYC G + A +
Sbjct: 380 LSNICST-GDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 6/255 (2%)
Query: 259 GEVQEALNCMKEMQEQGCQPNVV--TYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVA 316
GE + MK++ E V+ ++ LI+ V+ A ++ K+ GI +
Sbjct: 178 GEERSLCLVMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRG 237
Query: 317 TNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREM 376
S+LK V E A + ++ M+SRG L+ S+ + +YC G + +L M
Sbjct: 238 VCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGM 297
Query: 377 VAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGR 436
++P + +F L L+EA +L + G S + +S S VI G CKV
Sbjct: 298 KHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKP 357
Query: 437 MQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCT 496
+ ++ + S L+ + +Y+ L C GD A ++ + L + Y T
Sbjct: 358 EEAIKLIHSFRLRP----NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 497 FVKELCAKGKVKEEY 511
+ C G+ + +
Sbjct: 414 MIDGYCNLGRTDKAF 428
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 199/437 (45%), Gaps = 8/437 (1%)
Query: 79 CYAAITDVLLSHSL---FSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAK 135
C + + ++L H L + +L R L+ + S FI + G K
Sbjct: 239 CISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMK 298
Query: 136 ASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMV 193
G P ++ + L +A + A ++ ++ K + D + +++I GFCK+G
Sbjct: 299 HYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKL-KLFGISQDSVSVSSVIDGFCKVGKP 357
Query: 194 ESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLID 253
E A K+ R PN Y++ + +C G+M A +F E PD V +TT+ID
Sbjct: 358 EEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFE-LGLLPDCVCYTTMID 416
Query: 254 GYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKD 313
GY G +A + + G P++ T LI G++ +A+ + M+ +G+K
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 314 NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL 373
+V T +++ G+ + + + + EM S G+ DV Y+++++ G EA I+
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 374 REMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKV 433
E++ + PS +F V +EA +L M + P+ ++ S ++ G CK
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 434 KGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDT 493
+ RM+ L + +L +G D +YN L+ GYC GD E A + + M+ + L N+ T
Sbjct: 597 Q-RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNEST 655
Query: 494 YCTFVKELCAKGKVKEE 510
+ V L K V E
Sbjct: 656 HHALVLGLEGKRFVNSE 672
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 149/292 (51%), Gaps = 8/292 (2%)
Query: 160 AKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM--RCEPNAITYNTMIH 217
A I+ ++ + L+ PD YTTMI G+C +G + A + F + P ++T +T++
Sbjct: 392 ASTIFQEIFELGLL-PDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI 450
Query: 218 GLCKK-GEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGC 276
G C + G + A VF R +++ + DVVT+ L+ GY K ++ + + EM+ G
Sbjct: 451 GACSRFGSISDAESVF-RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGI 509
Query: 277 QPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIK 336
P+V TYN LI + + G +DEA ++S++ +G + T ++ GF G +EA
Sbjct: 510 SPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFI 569
Query: 337 HMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLV 396
M M DV S +++ YCK + +A+ + +++ +KP V +N +
Sbjct: 570 LWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYC 629
Query: 397 AERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
+ +E+A L+ M + G PN ++ ++ GL +G+ + E +SML
Sbjct: 630 SVGDIEKACELIGLMVQRGMLPNESTHHALVLGL---EGKRFVNSETHASML 678
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 162/364 (44%), Gaps = 9/364 (2%)
Query: 152 VRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEP---N 208
+R +VN+A + +V + + P ++++ ++ +E AR+ + M N
Sbjct: 212 IRERKVNMALKLTYKVDQFGIF-PSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLN 270
Query: 209 AITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM 268
A + I C G D + + RPD+V FT ID K G ++EA + +
Sbjct: 271 AAVLSLFIRKYCSDGYFDKGWELLMGM-KHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL 329
Query: 269 KEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMV 328
+++ G + V+ +++I+G C G +EA +++ RL+ N+ +S L C
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICST 386
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSF 388
G A +E+ G+ D Y+ +++ YC +G+ +A ++ PS+++
Sbjct: 387 GDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTS 446
Query: 389 NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
+ + +A + +NM G + ++Y+ ++ G K ++ V EL+ M
Sbjct: 447 TILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH-QLNKVFELIDEMR 505
Query: 449 QSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
+G + D YN L+ G + A + + ++I + F+ + + + +G +
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQ 565
Query: 509 EEYL 512
E ++
Sbjct: 566 EAFI 569
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
F+ LID + +V AL ++ + G P+ +L++ + ++ A+ + M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP 366
+G N A + ++ +C G ++ + + M G+ D+ A++V +++ CK G
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 367 SEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
EA S+L ++ + S ++V K EEA+ L+ + PN YS
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSF 379
Query: 427 ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALK 477
+ +C G M + + + G D Y ++ GYC G + A +
Sbjct: 380 LSNICST-GDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 6/255 (2%)
Query: 259 GEVQEALNCMKEMQEQGCQPNVV--TYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVA 316
GE + MK++ E V+ ++ LI+ V+ A ++ K+ GI +
Sbjct: 178 GEERSLCLVMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRG 237
Query: 317 TNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREM 376
S+LK V E A + ++ M+SRG L+ S+ + +YC G + +L M
Sbjct: 238 VCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGM 297
Query: 377 VAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGR 436
++P + +F L L+EA +L + G S + +S S VI G CKV
Sbjct: 298 KHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKP 357
Query: 437 MQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCT 496
+ ++ + S L+ + +Y+ L C GD A ++ + L + Y T
Sbjct: 358 EEAIKLIHSFRLRP----NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 497 FVKELCAKGKVKEEY 511
+ C G+ + +
Sbjct: 414 MIDGYCNLGRTDKAF 428
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/521 (24%), Positives = 243/521 (46%), Gaps = 37/521 (7%)
Query: 8 ATVKP--SSIVTTITSLLQTPDSEPLKKFSCYLTPSLVTQVIKN--------THNPHHAL 57
AT+KP S ++ T+TS+L + + L+ + Y+ +TQ + P +
Sbjct: 2 ATLKPPESQLLKTLTSILTSEKTHFLETLNPYIPQ--ITQPLLTSLLSSPSLAKKPETLV 59
Query: 58 FFFNWA--SNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFI 115
FF WA S P+ P++ P ++ LLSH F+ A SLL + SD S
Sbjct: 60 SFFQWAQTSIPEAFPSDSPLP---LISVVRSLLSHHKFADAKSLLVSYIRTSDASLS-LC 115
Query: 116 NAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEP 175
N+ + +H + P + L + + ++A I+ ++++ L +P
Sbjct: 116 NSL-----LHPNLHL-----SPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKL-KP 164
Query: 176 DVFTYTTMIRGFCKMGM---VESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAM 229
++ T T++ G + + SAR+VFD+M N T+N +++G C +G+++ A+
Sbjct: 165 NLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDAL 224
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
+ R PD VT+ T++ SK+G + + + +M++ G PN VTYN L+ G
Sbjct: 225 GMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYG 284
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
C G++ EA +++ M+ + ++ T ++ G C G E ++ M M S + D
Sbjct: 285 YCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPD 344
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
V Y+ +++ ++G EA ++ +M +K + + N + L E K E +K
Sbjct: 345 VVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVK 404
Query: 410 NMPRM-GCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCE 468
+ M G SP+ ++Y +I KV G + E++ M Q G ++ N +L C+
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKV-GDLSGALEMMREMGQKGIKMNTITLNTILDALCK 463
Query: 469 DGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ + A + + F+ ++ TY T + + KV++
Sbjct: 464 ERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK 504
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 174/347 (50%), Gaps = 7/347 (2%)
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAM 229
++PDV TY T+I G ++G+ ARK+ ++M + N +T+N + LCK+ + +
Sbjct: 341 LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVT 400
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
R + PD+VT+ TLI Y K G++ AL M+EM ++G + N +T N +++
Sbjct: 401 RKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
LC +DEA +++ +G + T +++ GF + E+A++ EM +
Sbjct: 461 LCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPT 520
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
V ++ ++ C GK A+ E+ + P S+FN++ E ++E+A
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN 580
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
+ P+ + +I++ GLCK +G + +++++ +D YN ++ +C+D
Sbjct: 581 ESIKHSFKPDNYTCNILLNGLCK-EGMTEKALNFFNTLIEE-REVDTVTYNTMISAFCKD 638
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE--EYLKR 514
+ A + +M +K ++ TY +F+ L GK+ E E LK+
Sbjct: 639 KKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 161/338 (47%), Gaps = 18/338 (5%)
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRV 231
PD+ TY T+I+ + K+G + A ++ EM + N IT NT++ LCK+ ++D A +
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Query: 232 FNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLC 291
N A + D VT+ TLI G+ + +V++AL EM++ P V T+N+LI GLC
Sbjct: 474 LNS-AHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLC 532
Query: 292 LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
G + A ++ G+ + +T S++ G+C GR E+A + E + D
Sbjct: 533 HHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNY 592
Query: 352 AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
++++N CK G +A++ ++ +R +V+ +N + ++KL+EA LL M
Sbjct: 593 TCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVT-YNTMISAFCKDKKLKEAYDLLSEM 651
Query: 412 PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGD 471
G P+ +Y+ I L + G++ +EL+ ++ G D
Sbjct: 652 EEKGLEPDRFTYNSFISLLME-DGKLSETDELLKK------------FSGKFGSMKRDLQ 698
Query: 472 EEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
E + Y + ELC++G++KE
Sbjct: 699 VETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 22/194 (11%)
Query: 114 FINAFGDRGDIRGAIHWFHKA--KASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
I + G + A +++++ + P +CN +L L + A ++ +++E
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER 621
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGA 228
E D TY TMI FCK ++ A + EM EP+ TYN+ I L + G++
Sbjct: 622 --EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSET 679
Query: 229 MRVFNRFA-ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
+ +F+ + S + D+ T + E +E LN + Y+ +I
Sbjct: 680 DELLKKFSGKFGSMKRDLQVET---EKNPATSESKEELNT-----------EAIAYSDVI 725
Query: 288 EGLCLSGNVDEAKR 301
+ LC G + E R
Sbjct: 726 DELCSRGRLKEHSR 739
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 174/360 (48%), Gaps = 8/360 (2%)
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---P 207
L +ANR+ A + + +V ++ PD YT ++ CK G V A ++ ++M
Sbjct: 116 LCKANRLKKAIRVIELMVSSGII-PDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPS 174
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
N +TYN ++ GLC G ++ +++ R + K P+ T++ L++ K EA+
Sbjct: 175 NTVTYNALVRGLCMLGSLNQSLQFVERLMQ-KGLAPNAFTYSFLLEAAYKERGTDEAVKL 233
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM 327
+ E+ +G +PN+V+YN L+ G C G D+A + ++ KG K NV + +L+ C
Sbjct: 234 LDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCC 293
Query: 328 VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA--KRMKPSV 385
GR EEA + EM V Y++++N G+ +A+ +L+EM + + +
Sbjct: 294 DGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTA 353
Query: 386 SSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVS 445
+S+N V L E K++ V L M C PN +Y+ I LC+ ++Q ++
Sbjct: 354 TSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYN-AIGSLCEHNSKVQEAFYIIQ 412
Query: 446 SMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKG 505
S+ Y ++ C G+ A + +Y+M F + TY ++ LC +G
Sbjct: 413 SLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEG 472
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 171/309 (55%), Gaps = 6/309 (1%)
Query: 206 EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL 265
+PN +++ LCK + A+RV S PD +T L++ KRG V A+
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMV-SSGIIPDASAYTYLVNQLCKRGNVGYAM 161
Query: 266 NCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGF 325
+++M++ G N VTYNAL+ GLC+ G+++++ + + ++ KG+ N T + +L+
Sbjct: 162 QLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAA 221
Query: 326 CMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSV 385
++EA+K + E++ +G + ++ +Y+V++ +CK G+ +A+++ RE+ AK K +V
Sbjct: 222 YKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANV 281
Query: 386 SSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVS 445
S+N + R L + + EEA LL M +P+ ++Y+I+I L GR + +++
Sbjct: 282 VSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLA-FHGRTEQALQVLK 340
Query: 446 SMLQSGHN--LDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCA 503
M + H + AT YN ++ C++G ++ +K + +MI + N+ TY + LC
Sbjct: 341 EMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTY-NAIGSLCE 399
Query: 504 -KGKVKEEY 511
KV+E +
Sbjct: 400 HNSKVQEAF 408
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 172/411 (41%), Gaps = 79/411 (19%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
+N RG++ A+ K + G ++ NA++ L +N + ++++++
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRC---EPNAITYNTMIHGLCKKGEMDGA 228
L P+ FTY+ ++ K + A K+ DE+ EPN ++YN ++ G CK+G D A
Sbjct: 207 LA-PNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 229 MRVF-------------------------NRFAESKSC---------RPDVVTFTTLIDG 254
M +F R+ E+ S P VVT+ LI+
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVV--TYNALIEGLCLSGNVDEAKRMMSKMRLKGIK 312
+ G ++AL +KEM + Q V +YN +I LC G VD + + +M + K
Sbjct: 326 LAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCK 385
Query: 313 DNVATNT-----------------------------------SMLKGFCMVGRSEEAIKH 337
N T S++ C G + A +
Sbjct: 386 PNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQL 445
Query: 338 MKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMV-AKRMKPSVSSFNAVFRVLV 396
+ EM G D D YS ++ C G + A+ +L M ++ KP+V +FNA+ L
Sbjct: 446 LYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLC 505
Query: 397 AERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM 447
R+ + A+ + + M PN +Y+I++ G+ + ++L +E++ +
Sbjct: 506 KIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAH-EDELELAKEVLDEL 555
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 123/270 (45%), Gaps = 1/270 (0%)
Query: 240 SCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEA 299
S +PD+ + + D S + ++ + ++ + G +PNV L+ LC + + +A
Sbjct: 66 SWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKA 125
Query: 300 KRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNE 359
R++ M GI + + T ++ C G A++ +++M G + Y+ +V
Sbjct: 126 IRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRG 185
Query: 360 YCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPN 419
C +G ++++ + ++ K + P+ +++ + ER +EAV LL + G PN
Sbjct: 186 LCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPN 245
Query: 420 FLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTV 479
+SY++++ G CK +GR L + G + YN LL C DG E A +
Sbjct: 246 LVSYNVLLTGFCK-EGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLL 304
Query: 480 YDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+M + TY + L G+ ++
Sbjct: 305 AEMDGGDRAPSVVTYNILINSLAFHGRTEQ 334
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 180 YTTMIRGFCKMGMVESARKVFDEM-RC--EPNAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
Y ++I C+ G +A ++ EM RC +P+A TY+ +I GLC +G GAM V +
Sbjct: 426 YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIME 485
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNV 296
ES++C+P V F +I G K A+ + M E+ PN TY L+EG+ +
Sbjct: 486 ESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDEL 545
Query: 297 DEAKRMMSKMRLKGI 311
+ AK ++ ++RL+ +
Sbjct: 546 ELAKEVLDELRLRKV 560
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 13/224 (5%)
Query: 179 TYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCK-KGEMDGAMRVFNR 234
+Y +I CK G V+ K DEM RC+PN TYN I LC+ ++ A +
Sbjct: 355 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQS 413
Query: 235 FA-ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
+ + K C D + ++I ++G A + EM G P+ TY+ALI GLCL
Sbjct: 414 LSNKQKCCTHDF--YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLE 471
Query: 294 GNVDEAKRMMSKMR-LKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKA 352
G A ++S M + K V +M+ G C + R++ A++ + MV + +
Sbjct: 472 GMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETT 531
Query: 353 YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLV 396
Y+++V + A +L E+ R++ + NAV R+++
Sbjct: 532 YAILVEGIAHEDELELAKEVLDEL---RLRKVIGQ-NAVDRIVM 571
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 174 EPDVFTYTTMIRGFCKMGMVESARKVFDEMR----CEPNAITYNTMIHGLCKKGEMDGAM 229
+PD TY+ +IRG C GM A +V M C+P +N MI GLCK D AM
Sbjct: 455 DPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAM 514
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQ 272
VF E K P+ T+ L++G + E++ A + E++
Sbjct: 515 EVFEMMVEKKR-MPNETTYAILVEGIAHEDELELAKEVLDELR 556
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 179/383 (46%), Gaps = 8/383 (2%)
Query: 121 RGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVF 178
RG++ + + G P A + N ++ V+ + + + + K+ +V V
Sbjct: 237 RGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKV- 295
Query: 179 TYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRF 235
TYT ++ K G + A K+FDEMR E + Y ++I C+KG M A +F+
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL 355
Query: 236 AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
E K P T+ LIDG K GE+ A M EMQ +G V +N LI+G C G
Sbjct: 356 TE-KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSV 355
VDEA + M KG + +V T ++ F + R +EA + + M+ G+ L +Y+
Sbjct: 415 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 474
Query: 356 IVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMG 415
+++ YCK G EA + EM +K ++P+ ++N + + K++EA L NM G
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Query: 416 CSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMA 475
P+ +Y+ +I G C + + L S M G + ++ Y ++ G + G + A
Sbjct: 535 MDPDSYTYTSLIHGEC-IADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Query: 476 LKTVYDMIDKSFLFNKDTYCTFV 498
+M K + + Y +
Sbjct: 594 FGLYDEMKRKGYTIDNKVYTALI 616
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 186/407 (45%), Gaps = 41/407 (10%)
Query: 143 SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDE 202
SC L + R++L I+ ++V V+ V++ T ++ G C+ G VE ++K+ E
Sbjct: 191 SCIVFLVAAKKRRRIDLCLEIFRRMVDSG-VKITVYSLTIVVEGLCRRGEVEKSKKLIKE 249
Query: 203 MRCE---PNAITYNTMIHGLCKK-----------------------------------GE 224
+ P A TYNT+I+ K+ G+
Sbjct: 250 FSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGK 309
Query: 225 MDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
M A ++F+ E + DV +T+LI ++G ++ A E+ E+G P+ TY
Sbjct: 310 MSDAEKLFDEMRE-RGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYG 368
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
ALI+G+C G + A+ +M++M+ KG+ +++ G+C G +EA M +
Sbjct: 369 ALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQK 428
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA 404
G DV + I + + ++ + EA L M+ +K S S+ + V E +EEA
Sbjct: 429 GFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 405 VLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLG 464
L M G PN ++Y+++I CK +G+++ +L ++M +G + D+ Y L+
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCK-QGKIKEARKLRANMEANGMDPDSYTYTSLIH 547
Query: 465 GYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
G C + + A++ +M K N TY + L GK E +
Sbjct: 548 GECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 594
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 212/505 (41%), Gaps = 76/505 (15%)
Query: 15 IVTTITSLLQTPDSEPLKKFSCYLTPSLVTQVIKNTHNPHH-ALFFFNWASNPQPNPNNY 73
V S L D + L K S +L V V+ + +L FFNWA P
Sbjct: 56 FVNVAHSHLIQSDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPG---- 111
Query: 74 SHPRSCYAAITDVLLSHSLFSTADSLLRR--SNKLSDFLASKF----------------- 114
SH +A + L + F +A+S+LR N D A F
Sbjct: 112 SHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVF 171
Query: 115 ---INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
F R A F + K G P SCNA + L+ RV++A Y + ++
Sbjct: 172 DSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE-MR 230
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMD 226
+ P+ +T ++ G+C+ G ++ ++ +M ++YNT+I G C+KG +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
A+++ N +S +P+VVTF TLI G+ + ++QEA EM+ PN VTYN L
Sbjct: 291 SALKLKNMMGKS-GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
I G G+ + A R M GI+ ++ T +++ G C
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC-------------------- 389
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
K K +A ++E+ + + P+ S+F+A+ + +
Sbjct: 390 ---------------KQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFE 434
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCK---VKGRMQLVEELVSSMLQSGHNLDATMYNCLL 463
L K+M R GC PN ++++++ C+ G Q++ E+V + LD+ + +
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP----LDSRTVHQVC 490
Query: 464 GGYCEDGDEEMALKTVYDMIDKSFL 488
G G +++ K + +M K FL
Sbjct: 491 NGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 184/447 (41%), Gaps = 62/447 (13%)
Query: 63 ASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFIN--AFGD 120
A+ P P+ N P+ +V SH + S D L NKLSD L S +
Sbjct: 37 ANTPIPHRRN-PEPKGQDLDFVNVAHSHLIQSDWDKL----NKLSDHLDSFRVKNVLLKI 91
Query: 121 RGDIRGAIHWFHKAKASGPCALSCNA---VLGVLVRANRVNLAKAIYDQVVKEALVEPDV 177
+ D ++ +F+ AK P + S VL L + + A++I +++ LV
Sbjct: 92 QKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESI----LRDVLVN--- 144
Query: 178 FTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAE 237
G V+ KVFD + L E D RVF+
Sbjct: 145 -------------GGVDLPAKVFDAL---------------LYSYRECDSTPRVFD---- 172
Query: 238 SKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVD 297
+L ++ + + A + +M++ G P V + NA + L G VD
Sbjct: 173 ------------SLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVD 220
Query: 298 EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIV 357
A R +MR I N T ++ G+C G+ ++ I+ +++M G +Y+ ++
Sbjct: 221 IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLI 280
Query: 358 NEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCS 417
+C+ G S A+ + M ++P+V +FN + KL+EA + M + +
Sbjct: 281 AGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVA 340
Query: 418 PNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALK 477
PN ++Y+ +I G + +G ++ M+ +G D YN L+ G C+ A +
Sbjct: 341 PNTVTYNTLINGYSQ-QGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ 399
Query: 478 TVYDMIDKSFLFNKDTYCTFVKELCAK 504
V ++ ++ + N T+ + C +
Sbjct: 400 FVKELDKENLVPNSSTFSALIMGQCVR 426
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 212/505 (41%), Gaps = 76/505 (15%)
Query: 15 IVTTITSLLQTPDSEPLKKFSCYLTPSLVTQVIKNTHNPHH-ALFFFNWASNPQPNPNNY 73
V S L D + L K S +L V V+ + +L FFNWA P
Sbjct: 56 FVNVAHSHLIQSDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPG---- 111
Query: 74 SHPRSCYAAITDVLLSHSLFSTADSLLRR--SNKLSDFLASKF----------------- 114
SH +A + L + F +A+S+LR N D A F
Sbjct: 112 SHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVF 171
Query: 115 ---INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
F R A F + K G P SCNA + L+ RV++A Y + ++
Sbjct: 172 DSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE-MR 230
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMD 226
+ P+ +T ++ G+C+ G ++ ++ +M ++YNT+I G C+KG +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
A+++ N +S +P+VVTF TLI G+ + ++QEA EM+ PN VTYN L
Sbjct: 291 SALKLKNMMGKS-GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
I G G+ + A R M GI+ ++ T +++ G C
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC-------------------- 389
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
K K +A ++E+ + + P+ S+F+A+ + +
Sbjct: 390 ---------------KQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFE 434
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCK---VKGRMQLVEELVSSMLQSGHNLDATMYNCLL 463
L K+M R GC PN ++++++ C+ G Q++ E+V + LD+ + +
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP----LDSRTVHQVC 490
Query: 464 GGYCEDGDEEMALKTVYDMIDKSFL 488
G G +++ K + +M K FL
Sbjct: 491 NGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 184/447 (41%), Gaps = 62/447 (13%)
Query: 63 ASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFIN--AFGD 120
A+ P P+ N P+ +V SH + S D L NKLSD L S +
Sbjct: 37 ANTPIPHRRN-PEPKGQDLDFVNVAHSHLIQSDWDKL----NKLSDHLDSFRVKNVLLKI 91
Query: 121 RGDIRGAIHWFHKAKASGPCALSCNA---VLGVLVRANRVNLAKAIYDQVVKEALVEPDV 177
+ D ++ +F+ AK P + S VL L + + A++I +++ LV
Sbjct: 92 QKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESI----LRDVLVN--- 144
Query: 178 FTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAE 237
G V+ KVFD + L E D RVF+
Sbjct: 145 -------------GGVDLPAKVFDAL---------------LYSYRECDSTPRVFD---- 172
Query: 238 SKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVD 297
+L ++ + + A + +M++ G P V + NA + L G VD
Sbjct: 173 ------------SLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVD 220
Query: 298 EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIV 357
A R +MR I N T ++ G+C G+ ++ I+ +++M G +Y+ ++
Sbjct: 221 IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLI 280
Query: 358 NEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCS 417
+C+ G S A+ + M ++P+V +FN + KL+EA + M + +
Sbjct: 281 AGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVA 340
Query: 418 PNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALK 477
PN ++Y+ +I G + +G ++ M+ +G D YN L+ G C+ A +
Sbjct: 341 PNTVTYNTLINGYSQ-QGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ 399
Query: 478 TVYDMIDKSFLFNKDTYCTFVKELCAK 504
V ++ ++ + N T+ + C +
Sbjct: 400 FVKELDKENLVPNSSTFSALIMGQCVR 426
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 213/451 (47%), Gaps = 38/451 (8%)
Query: 88 LSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDI-------RGAIHWFH-------- 132
++H ++S N+ D A KFIN + I IH F
Sbjct: 59 INHRIYSIVSWAFLNLNRYED--AEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSK 116
Query: 133 ---------KAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEP-DVFTYTT 182
+ + P +L+ +++ V ++ A + + + + + P D F +
Sbjct: 117 GLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSA 176
Query: 183 MIRGFCKMGMVESARKVF----DEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAES 238
+I GFCK+G E A F D PN +TY T++ LC+ G++D +R R E
Sbjct: 177 VISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVD-EVRDLVRRLED 235
Query: 239 KSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDE 298
+ D V ++ I GY K G + +AL +EM E+G +VV+Y+ LI+GL GNV+E
Sbjct: 236 EGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEE 295
Query: 299 AKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVN 358
A ++ KM +G++ N+ T T++++G C +G+ EEA ++S G+++D Y +++
Sbjct: 296 ALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLID 355
Query: 359 EYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSP 418
C+ G + A S+L +M + ++PS+ ++N V L ++ EA + K G
Sbjct: 356 GICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK-----GVVG 410
Query: 419 NFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKT 478
+ ++YS ++ KV+ + V E+ L++ +D M N LL + G A
Sbjct: 411 DVITYSTLLDSYIKVQ-NIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADAL 469
Query: 479 VYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
M + + TY T +K C G+++E
Sbjct: 470 YRAMPEMDLTPDTATYATMIKGYCKTGQIEE 500
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 184/392 (46%), Gaps = 36/392 (9%)
Query: 121 RGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTY 180
RG AI + + G + +L LV R A + + L DV Y
Sbjct: 599 RGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDY 658
Query: 181 TTMIRGFCKMGMVESARKV--FDEMR-CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAE 237
T +I G CK G + A + F + R N ITYN++I+GLC++G + A+R+F+ E
Sbjct: 659 TIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSL-E 717
Query: 238 SKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVD 297
+ P VT+ LID K G +A + M +G PN++ YN++++G C G +
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTE 777
Query: 298 EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIV 357
+A R++S+ + + + T +SM+KG+C G EEA+ E + + D + ++
Sbjct: 778 DAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLI 837
Query: 358 NEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCS 417
+C G+ EA +LREM+ S S + RV + +L E S
Sbjct: 838 KGFCTKGRMEEARGLLREMLV-----SESVVKLINRV---DAELAE-------------S 876
Query: 418 PNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALK 477
+ + + +C +V +++++E+ S++ SG NL + Y L + D +EE
Sbjct: 877 ESIRGFLVELCEQGRVPQAIKILDEISSTIYPSGKNLGS--YQRL--QFLNDVNEE---- 928
Query: 478 TVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
++ K ++ + + + V LC GK+++
Sbjct: 929 ---EIKKKDYVHDFHSLHSTVSSLCTSGKLEQ 957
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 174/402 (43%), Gaps = 39/402 (9%)
Query: 144 CNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM 203
CN +L + A A+Y + + E + PD TY TMI+G+CK G +E A ++F+E+
Sbjct: 450 CNILLKAFLLMGAYGEADALY-RAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL 508
Query: 204 R--CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
R A+ YN +I LCKKG +D A V E K D+ T TL+ G
Sbjct: 509 RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWE-KGLYLDIHTSRTLLHSIHANGGD 567
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIK--------- 312
+ L + +++ + N I LC G+ + A + MR KG+
Sbjct: 568 KGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILK 627
Query: 313 ---DN----------------------VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMD 347
DN V T ++ G C G +A+ SRG+
Sbjct: 628 TLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVT 687
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
L+ Y+ ++N C+ G EA+ + + + PS ++ + L E +A L
Sbjct: 688 LNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKL 747
Query: 408 LKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
L +M G PN + Y+ ++ G CK+ G+ + +VS + DA + ++ GYC
Sbjct: 748 LDSMVSKGLVPNIIIYNSIVDGYCKL-GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYC 806
Query: 468 EDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ GD E AL + DK+ + + +K C KG+++E
Sbjct: 807 KKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEE 848
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 134/266 (50%), Gaps = 4/266 (1%)
Query: 187 FCKMGMVESARKVFDEMRCEPNAITY-NTMIHGLCKK-GEMDGAMRVFNRFAESKSCRPD 244
CK G E+A +V+ MR + +T+ +T++ L +D + V N E+ D
Sbjct: 596 LCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNA-GETTLSSMD 654
Query: 245 VVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMS 304
V+ +T +I+G K G + +ALN + +G N +TYN+LI GLC G + EA R+
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 305 KMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIG 364
+ G+ + T ++ C G +A K + MVS+G+ ++ Y+ IV+ YCK+G
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 365 KPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYS 424
+ +A+ ++ + R+ P + +++ + + +EEA+ + S +F +
Sbjct: 775 QTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFL 834
Query: 425 IVICGLCKVKGRMQLVEELVSSMLQS 450
+I G C KGRM+ L+ ML S
Sbjct: 835 FLIKGFC-TKGRMEEARGLLREMLVS 859
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 180/433 (41%), Gaps = 48/433 (11%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
S I+ G++ A+ K G P ++ A++ L + ++ A ++++++
Sbjct: 281 SILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILS 340
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMD 226
+E D F Y T+I G C+ G + A + +M +P+ +TYNT+I+GLC G +
Sbjct: 341 VG-IEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVS 399
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
A V SK DV+T++TL+D Y K + L + E ++V N L
Sbjct: 400 EADEV------SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNIL 453
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
++ L G EA + M + + AT +M+KG+C G+ EEA++ E+ +
Sbjct: 454 LKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSV 513
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
V Y+ I++ CK G A +L E+ K + + + + + A + +
Sbjct: 514 SAAV-CYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILG 572
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSG--------------- 451
L+ + ++ + I LCK +G + E+ M + G
Sbjct: 573 LVYGLEQLNSDVCLGMLNDAILLLCK-RGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVD 631
Query: 452 --HNLDATM-----------------YNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKD 492
+LDA + Y ++ G C++G AL + N
Sbjct: 632 NLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTI 691
Query: 493 TYCTFVKELCAKG 505
TY + + LC +G
Sbjct: 692 TYNSLINGLCQQG 704
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 153/381 (40%), Gaps = 45/381 (11%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P S + L L R + N Y Q+ + + + Y+ + F + E A K
Sbjct: 24 PTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQ-ININHRIYSIVSWAFLNLNRYEDAEK 82
Query: 199 VFD----EMRCEPNAITYNTMIHGL-CKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLID 253
+ + P +++IHG + + + + + P +TF +LI
Sbjct: 83 FINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIY 142
Query: 254 GYSKRGEVQEALNCMKEMQEQGCQPNVVTY--NALIEGLCLSGNVDEAKRMMSKMRLKGI 311
+ ++GE+ A+ ++ M + + +A+I G C G + A G+
Sbjct: 143 RFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGV 202
Query: 312 -KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAV 370
N+ T T+++ C +G+ +E ++ + G + D YS ++ Y K G +A+
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDAL 262
Query: 371 SILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGL 430
REMV K M V S++ + L E +EEA+ LL M + G PN ++Y+ +I GL
Sbjct: 263 MQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGL 322
Query: 431 CKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFN 490
CK+ G+++ L + +L G +D +Y
Sbjct: 323 CKM-GKLEEAFVLFNRILSVGIEVDEFLY------------------------------- 350
Query: 491 KDTYCTFVKELCAKGKVKEEY 511
T + +C KG + +
Sbjct: 351 ----VTLIDGICRKGNLNRAF 367
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 137/321 (42%), Gaps = 47/321 (14%)
Query: 200 FDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYS-KR 258
D + N Y+ + + A + N S P +LI G+S R
Sbjct: 52 LDSKQININHRIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITR 111
Query: 259 GEVQEALNCMKE-MQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIK---DN 314
+ + L +++ ++ G P+ +T+ +LI G +D A ++ M K + DN
Sbjct: 112 DDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDN 171
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL-DVKAYSVIVNEYCKIGKPSEAVSIL 373
++++ GFC +G+ E A+ + V G+ + ++ Y+ +V+ C++GK E +
Sbjct: 172 FVC-SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDE----V 226
Query: 374 REMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKV 433
R++V +R++ F+ VF YS I G K
Sbjct: 227 RDLV-RRLEDEGFEFDCVF------------------------------YSNWIHGYFKG 255
Query: 434 KGRMQLVEELVSS--MLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNK 491
LV+ L+ M++ G N D Y+ L+ G ++G+ E AL + MI + N
Sbjct: 256 GA---LVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNL 312
Query: 492 DTYCTFVKELCAKGKVKEEYL 512
TY ++ LC GK++E ++
Sbjct: 313 ITYTAIIRGLCKMGKLEEAFV 333
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 161/330 (48%), Gaps = 15/330 (4%)
Query: 59 FFNWASNPQPNPNNYSHPRSCYAAITDVLLS----HSLFSTADSLLRRSNKLSDFLASKF 114
FF W + N+ H +CY + + ++ D +++ + +
Sbjct: 138 FFVWCGGQE----NFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLL 193
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
I G+ G R + F K+K P S NA+L L+ + L +Y+Q++++
Sbjct: 194 ICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGF 253
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAM 229
PDV TY ++ ++G + ++ DEM + P+ TYN ++H L + A+
Sbjct: 254 T-PDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAAL 312
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
+ N E P V+ FTTLIDG S+ G+++ M E + GC P+VV Y +I G
Sbjct: 313 NLLNHMREV-GVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITG 371
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
G +++A+ M +M KG NV T SM++GFCM G+ +EA +KEM SRG + +
Sbjct: 372 YISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPN 431
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
YS +VN GK EA ++++MV K
Sbjct: 432 FVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 125/271 (46%), Gaps = 8/271 (2%)
Query: 188 CKMGMVESARKVFDEM------RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSC 241
C G AR V ++ P +YN ++H L + V+ + E
Sbjct: 195 CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLED-GF 253
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKR 301
PDV+T+ ++ + G+ + EM + G P++ TYN L+ L A
Sbjct: 254 TPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALN 313
Query: 302 MMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYC 361
+++ MR G++ V T+++ G G+ E M E V G DV Y+V++ Y
Sbjct: 314 LLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYI 373
Query: 362 KIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFL 421
G+ +A + +EM K P+V ++N++ R K +EA LLK M GC+PNF+
Sbjct: 374 SGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFV 433
Query: 422 SYSIVICGLCKVKGRMQLVEELVSSMLQSGH 452
YS ++ L K G++ E+V M++ GH
Sbjct: 434 VYSTLVNNL-KNAGKVLEAHEVVKDMVEKGH 463
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 142/337 (42%), Gaps = 44/337 (13%)
Query: 180 YTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
Y +++ F + G ++ ++ DEM + A T+N +I C GE A V +F
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFI 211
Query: 237 ESKSC--RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSG 294
+SK+ RP ++ ++ + + ++M E G P+V+TYN +
Sbjct: 212 KSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIV-------- 263
Query: 295 NVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYS 354
M + RL G+++ + + EMV G D+ Y+
Sbjct: 264 -------MFANFRL--------------------GKTDRLYRLLDEMVKDGFSPDLYTYN 296
Query: 355 VIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRM 414
++++ KP A+++L M ++P V F + L KLE + ++
Sbjct: 297 ILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKV 356
Query: 415 GCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEM 474
GC+P+ + Y+++I G G ++ EE+ M + G + YN ++ G+C G +
Sbjct: 357 GCTPDVVCYTVMITGYIS-GGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKE 415
Query: 475 ALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
A + +M + N Y T V L GKV E +
Sbjct: 416 ACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAH 452
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 177/377 (46%), Gaps = 43/377 (11%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
I+A D G A F + + SG P + NA+L V+ + A+++ ++ K
Sbjct: 311 ISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG- 369
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMRC---EPNAITYNTMIHGLCKKGE----- 224
V PD TY+ +I + G ESAR V EM +PN+ ++ ++ G +GE
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 225 ------------------------------MDGAMRVFNRFAESKSCRPDVVTFTTLIDG 254
+D AM F+R S+ PD VT+ TLID
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRML-SEGIEPDRVTWNTLIDC 488
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
+ K G A + M+ +GC P TYN +I D+ KR++ KM+ +GI N
Sbjct: 489 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
V T+T+++ + GR +AI+ ++EM S G+ Y+ ++N Y + G +AV+ R
Sbjct: 549 VVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 608
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
M + +KPS+ + N++ +R+ EA +L+ M G P+ ++Y+ ++ L +V
Sbjct: 609 VMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVD 668
Query: 435 GRMQLVEELVSSMLQSG 451
+ Q V + M+ SG
Sbjct: 669 -KFQKVPVVYEEMIMSG 684
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 136/275 (49%), Gaps = 7/275 (2%)
Query: 166 QVVKEAL---VEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGL 219
QV+KE V+PD Y +I F K ++ A FD M E P+ +T+NT+I
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 220 CKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPN 279
CK G A +F E + C P T+ +I+ Y + + + +M+ QG PN
Sbjct: 490 CKHGRHIVAEEMFEAM-ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548
Query: 280 VVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMK 339
VVT+ L++ SG ++A + +M+ G+K + +++ + G SE+A+ +
Sbjct: 549 VVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 608
Query: 340 EMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAER 399
M S G+ + A + ++N + + + +EA ++L+ M +KP V ++ + + L+
Sbjct: 609 VMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVD 668
Query: 400 KLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
K ++ ++ + M GC P+ + S++ L +K
Sbjct: 669 KFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMK 703
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 183/407 (44%), Gaps = 11/407 (2%)
Query: 108 DFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQV 167
+ L S I+A G + A F ++ L+ NA++G R N + A + ++
Sbjct: 167 ELLYSILIHALGRSEKLYEA---FLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKM 223
Query: 168 VKEALVEPDVFTYTTMIRGFCKMGMVESAR--KVFDEM---RCEPNAITYNTMIHGLCKK 222
++ + D Y+ +I+ + ++S +++ E+ + E + N +I G K
Sbjct: 224 RQDG-YQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 223 GEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVT 282
G+ A+++ A++ T ++I + G EA +E+++ G +P
Sbjct: 283 GDPSKALQLLG-MAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRA 341
Query: 283 YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
YNAL++G +G + +A+ M+S+M +G+ + T + ++ + GR E A +KEM
Sbjct: 342 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME 401
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLE 402
+ + + +S ++ + G+ + +L+EM + +KP +N V L+
Sbjct: 402 AGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLD 461
Query: 403 EAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCL 462
A+ M G P+ ++++ +I CK GR + EE+ +M + G AT YN +
Sbjct: 462 HAMTTFDRMLSEGIEPDRVTWNTLIDCHCK-HGRHIVAEEMFEAMERRGCLPCATTYNIM 520
Query: 463 LGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ Y + + + + M + L N T+ T V G+ +
Sbjct: 521 INSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 178/420 (42%), Gaps = 45/420 (10%)
Query: 99 LLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCA--LSCNAVLGVLVRANR 156
LL + L+ + I A DI A++ K + G + ++ + V+ L R+N+
Sbjct: 188 LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNK 247
Query: 157 VN--LAKAIYDQVVKEALVEPDVFTYTTMIRGFCK----------MGMVES--------- 195
++ + +Y ++ ++ L E DV +I GF K +GM ++
Sbjct: 248 IDSVMLLRLYKEIERDKL-ELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTAT 306
Query: 196 ----------------ARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
A +F+E+R +P YN ++ G K G + A + +
Sbjct: 307 LVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM- 365
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNV 296
E + PD T++ LID Y G + A +KEM+ QPN ++ L+ G G
Sbjct: 366 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEW 425
Query: 297 DEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVI 356
+ +++ +M+ G+K + ++ F + A+ M+S G++ D ++ +
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 485
Query: 357 VNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGC 416
++ +CK G+ A + M + P +++N + + + ++ LL M G
Sbjct: 486 IDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545
Query: 417 SPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMAL 476
PN ++++ ++ K GR E + M G +TMYN L+ Y + G E A+
Sbjct: 546 LPNVVTHTTLVDVYGK-SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAV 604
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 144/345 (41%), Gaps = 46/345 (13%)
Query: 205 CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEA 264
C + Y+ +IH L + + +++ F S+ +T+ LI ++ ++++A
Sbjct: 163 CFSYELLYSILIHALGR------SEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKA 216
Query: 265 LNCMKEMQEQGCQPNVVTY-------------------------------------NALI 287
LN + +M++ G Q + V Y N +I
Sbjct: 217 LNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDII 276
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMD 347
G SG+ +A +++ + G+ AT S++ GR+ EA +E+ G+
Sbjct: 277 MGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIK 336
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
+AY+ ++ Y K G +A S++ EM + + P +++ + V + E A ++
Sbjct: 337 PRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIV 396
Query: 408 LKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
LK M PN +S ++ G + +G Q +++ M G D YN ++ +
Sbjct: 397 LKEMEAGDVQPNSFVFSRLLAGF-RDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 455
Query: 468 EDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGK--VKEE 510
+ + A+ T M+ + ++ T+ T + C G+ V EE
Sbjct: 456 KFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEE 500
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 195/395 (49%), Gaps = 7/395 (1%)
Query: 109 FLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQ 166
F+ +K F +G + A + + G P + N ++ R ++LA++I+ +
Sbjct: 450 FMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSE 509
Query: 167 VVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRC---EPNAITYNTMIHGLCKKG 223
++++ L EP+ FTY+ +I GF K ++A V ++M E N + YNT+I+GLCK G
Sbjct: 510 MLEKGL-EPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVG 568
Query: 224 EMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTY 283
+ A + + K ++ ++IDG+ K G+ A+ +EM E G PNVVT+
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTF 628
Query: 284 NALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVS 343
+LI G C S +D A M +M+ +K ++ +++ GFC + A E+
Sbjct: 629 TSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPE 688
Query: 344 RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEE 403
G+ +V Y+ +++ + +GK A+ + ++MV + + ++ + L+ + +
Sbjct: 689 LGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINL 748
Query: 404 AVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLL 463
A L + +G P+ + + +++ GL K KG+ +++ M + + +Y+ ++
Sbjct: 749 ASDLYSELLDLGIVPDEILHMVLVNGLSK-KGQFLKASKMLEEMKKKDVTPNVLLYSTVI 807
Query: 464 GGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
G+ +G+ A + +M++K + + + V
Sbjct: 808 AGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 184/391 (47%), Gaps = 9/391 (2%)
Query: 67 QPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRG 126
+PN Y++ + + ++ L+ S+FS +L + + ++F S I+ F D +
Sbjct: 481 EPNVVFYNNMMLAHCRMKNMDLARSIFS---EMLEKGLEPNNFTYSILIDGFFKNKDEQN 537
Query: 127 AIHWFHKAKASGPCA--LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMI 184
A ++ AS A + N ++ L + + + AK + ++KE +Y ++I
Sbjct: 538 AWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSII 597
Query: 185 RGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSC 241
GF K+G +SA + + EM PN +T+ ++I+G CK MD A+ + + +S
Sbjct: 598 DGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM-KSMEL 656
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKR 301
+ D+ + LIDG+ K+ +++ A E+ E G PNV YN+LI G G +D A
Sbjct: 657 KLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAID 716
Query: 302 MMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYC 361
+ KM GI ++ T T+M+ G G A E++ G+ D + V+VN
Sbjct: 717 LYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLS 776
Query: 362 KIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFL 421
K G+ +A +L EM K + P+V ++ V E L EA L M G +
Sbjct: 777 KKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDT 836
Query: 422 SYSIVICGLCKVKGRMQLVEELVSSMLQSGH 452
+++++ G + + L S ++S +
Sbjct: 837 VFNLLVSGRVEKPPAASKISSLASPEMRSSY 867
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 182/402 (45%), Gaps = 43/402 (10%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG-PCA-LSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
I AF G++ A+ + G P + ++ +++ + N + A +++++ +E L
Sbjct: 317 IVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGL 376
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAM 229
PD ++ M+ FCK +E A + + M R P+++ +TMI G K + A+
Sbjct: 377 A-PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAAL 435
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
+FN ES + L+ + K+G+V A + +K M+++G +PNVV YN ++
Sbjct: 436 EIFNDSFESWIAHGFMCNKIFLL--FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLA 493
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
C N+D A+ + S+M KG++ N T + ++ GF + A + +M + + +
Sbjct: 494 HCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEAN 553
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
Y+ I+N CK+G+ S+A +L+ L+ E++
Sbjct: 554 EVIYNTIINGLCKVGQTSKAKEMLQN-------------------LIKEKRYS------- 587
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
M C+ SY+ +I G KV G E M ++G + + + L+ G+C+
Sbjct: 588 ----MSCT----SYNSIIDGFVKV-GDTDSAVETYREMSENGKSPNVVTFTSLINGFCKS 638
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
++AL+ ++M + Y + C K +K Y
Sbjct: 639 NRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAY 680
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 169/375 (45%), Gaps = 14/375 (3%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P N VL LVR+N ++ AK IY+++V V D T ++R + E A K
Sbjct: 202 PFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIG-VAGDNVTTQLLMRASLRERKPEEAVK 260
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+F + EP+ + ++ + CK ++ A+ + T+T++I +
Sbjct: 261 IFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAF 320
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G ++EA+ M EM G +V+ +L+ G C + +A + ++M +G+ +
Sbjct: 321 VKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDK 380
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYC----KIGKPSEAVS 371
+ M++ FC E+AI+ M S + + SV+V+ K P A+
Sbjct: 381 VMFSVMVEWFCKNMEMEKAIEFYMRMKS----VRIAPSSVLVHTMIQGCLKAESPEAALE 436
Query: 372 ILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLC 431
I + + N +F + + K++ A LK M + G PN + Y+ ++ C
Sbjct: 437 IFNDSFESWIAHGFMC-NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHC 495
Query: 432 KVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNK 491
++K M L + S ML+ G + Y+ L+ G+ ++ DE+ A + M +F N+
Sbjct: 496 RMKN-MDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANE 554
Query: 492 DTYCTFVKELCAKGK 506
Y T + LC G+
Sbjct: 555 VIYNTIINGLCKVGQ 569
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 2/231 (0%)
Query: 248 FTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR 307
F L++ Y + + A++C M ++ P V N ++ L S +DEAK + +KM
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 308 LKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPS 367
L G+ + T +++ + EEA+K + ++SRG + D +S+ V CK
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLV 291
Query: 368 EAVSILREMVAKRMKP-SVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
A+ +LREM K P S ++ +V V E +EEAV ++ M G + ++ + +
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351
Query: 427 ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALK 477
+ G CK + +L + M + G D M++ ++ +C++ + E A++
Sbjct: 352 VNGYCK-GNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIE 401
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 175/343 (51%), Gaps = 16/343 (4%)
Query: 180 YTTMIRGFCKMGMVESARKVFDEMR----CEPNAITYNTMIHGLCKKGEMDGAMRVFNRF 235
+ + I +C+ ++ A FD M+ +PN YNT+++G K G+MD A+R + R
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 236 AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
+ ++ +PDV TF LI+GY + + AL+ +EM+E+GC+PNVV++N LI G SG
Sbjct: 220 GKERA-KPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSV 355
++E +M +M G + + AT ++ G C GR ++A + +++++ + Y
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 356 IVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMG 415
+V + C K A+ ++ E+ K P + + L + E+A ++ M G
Sbjct: 339 LVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAG 398
Query: 416 CSPNFLSYSIVICGLCKVK-----GRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDG 470
P+ +++++++ LC R++L L SS G+ D T Y+ L+ G+ ++G
Sbjct: 399 ILPDSVTFNLLLRDLCSSDHSTDANRLRL---LASS---KGYEPDETTYHVLVSGFTKEG 452
Query: 471 DEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLK 513
+ V +M+DK L + TY + L GK + ++
Sbjct: 453 RRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQVR 495
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 218/483 (45%), Gaps = 34/483 (7%)
Query: 5 VRKATVKPSSIVTTITSLLQTPDSEPLKKFSCYLTPSLVTQVIKNTHNPHHALFFFNWAS 64
V K+ P+ I + + + P+ P K + P+L + +P H+ F N+
Sbjct: 12 VSKSHHLPAPITPPLPEIYRIPNPPP-KLPEISIPPTLTL-----SPSPKHS-NFVNFLE 64
Query: 65 NPQPNPNNYSHPRSCYAAITDVLLSHSLFSTAD-SLLRRSNKLSDFLASKFINAFGDRGD 123
N P+ + P++ + + +H L++ D ++ + L F ++F
Sbjct: 65 NNLPHHQTLT-PQTLLGFLRSKIRNHPLYAHYDFAVFNWAATLDTFRHDH--DSFLWMSR 121
Query: 124 IRGAIHWFHKAK------ASGPCA-----LSC-------NAVLGVLVRANRVNLAKAIYD 165
A H F A+ PC SC + + RA +++ A +D
Sbjct: 122 SLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEPIFRSAIDAYCRARKMDYALLAFD 181
Query: 166 QVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKK 222
+ + +P+V Y T++ G+ K G ++ A + + M R +P+ T+N +I+G C+
Sbjct: 182 TMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRS 241
Query: 223 GEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVT 282
+ D A+ +F E K C P+VV+F TLI G+ G+++E + EM E GC+ + T
Sbjct: 242 SKFDLALDLFREMKE-KGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEAT 300
Query: 283 YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
L++GLC G VD+A ++ + K + + S+++ C ++ A++ M+E+
Sbjct: 301 CEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELW 360
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLE 402
+G A + +V K G+ +A + +M+ + P +FN + R L +
Sbjct: 361 KKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHST 420
Query: 403 EAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCL 462
+A L G P+ +Y +++ G K +GR + E LV+ ML D YN L
Sbjct: 421 DANRLRLLASSKGYEPDETTYHVLVSGFTK-EGRRKEGEVLVNEMLDKDMLPDIFTYNRL 479
Query: 463 LGG 465
+ G
Sbjct: 480 MDG 482
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 143/289 (49%), Gaps = 5/289 (1%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR 204
N V+ V++ ++ A Y ++ KE +PDV T+ +I G+C+ + A +F EM+
Sbjct: 197 NTVVNGYVKSGDMDKALRFYQRMGKER-AKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 205 ---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
CEPN +++NT+I G G+++ +++ E CR T L+DG + G V
Sbjct: 256 EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIEL-GCRFSEATCEILVDGLCREGRV 314
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
+A + ++ + P+ Y +L+E LC A MM ++ KG T++
Sbjct: 315 DDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTL 374
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
++G GR+E+A M++M++ G+ D +++++ + C ++A + +K
Sbjct: 375 VEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGY 434
Query: 382 KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGL 430
+P ++++ + E + +E +L+ M P+ +Y+ ++ GL
Sbjct: 435 EPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 135/290 (46%), Gaps = 40/290 (13%)
Query: 115 INAFGDRGDIRGAIHWFHK--AKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
+N + GD+ A+ ++ + + + P + N ++ R+++ +LA ++ ++ KE
Sbjct: 200 VNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREM-KEKG 258
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGA- 228
EP+V ++ T+IRGF G +E K+ EM C + T ++ GLC++G +D A
Sbjct: 259 CEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDAC 318
Query: 229 ---MRVFNRF----------------AESKSCR--------------PDVVTFTTLIDGY 255
+ + N+ E+K+ R P + TTL++G
Sbjct: 319 GLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGL 378
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G ++A M++M G P+ VT+N L+ LC S + +A R+ KG + +
Sbjct: 379 RKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDE 438
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGK 365
T ++ GF GR +E + EM+ + M D+ Y+ +++ GK
Sbjct: 439 TTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 176/357 (49%), Gaps = 7/357 (1%)
Query: 166 QVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD---EMRCEPNAITYNTMIHGLCKK 222
+++KE + D Y ++ G+C+ G + A +V D E+ N N++I+G CK
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 223 GEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVT 282
G++ A ++F+R + S +PD T+ TL+DGY + G V EAL +M ++ P V+T
Sbjct: 380 GQLVEAEQIFSRMNDW-SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMT 438
Query: 283 YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
YN L++G G + + M +G+ + + +++L+ +G EA+K + ++
Sbjct: 439 YNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVL 498
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLE 402
+RG+ D +V+++ CK+ K +EA IL + R KP+V ++ A+ L+
Sbjct: 499 ARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLK 558
Query: 403 EAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCL 462
EA + + M R G P Y+ +I G K + + V +LV + G Y L
Sbjct: 559 EAFAVKEYMERKGIFPTIEMYNTLISGAFKYR-HLNKVADLVIELRARGLTPTVATYGAL 617
Query: 463 LGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEE--YLKRCVD 517
+ G+C G + A T ++MI+K N + L K+ E L++ VD
Sbjct: 618 ITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD 674
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 134/532 (25%), Positives = 231/532 (43%), Gaps = 62/532 (11%)
Query: 10 VKPSSIVTTITSLLQTPDSEPLKKFSCYLTPSLVTQVIKNTH-NPHHALFFFNWASNPQ- 67
++P ++ ++ LL E L S + L+ +++ NP L FN AS Q
Sbjct: 41 IRPE-LLERVSRLLVLGRYEALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQK 99
Query: 68 ---------------PNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLR--RSNKLSDFL 110
NY +S + V L+HS F L+R + S +
Sbjct: 100 FRPDYKAYCKMVHILSRARNYQQTKSYLCEL--VALNHSGFVVWGELVRVFKEFSFSPTV 157
Query: 111 ASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVV 168
+ + ++G ++ A+H F G P LSCN++L LVR +A +YDQ++
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMI 217
Query: 169 KEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGA 228
V PDVFT + ++ + C+ G +D A
Sbjct: 218 SFE-VSPDVFTCSIVVNAY--------------------------------CRSGNVDKA 244
Query: 229 MRVFNRFAESK-SCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
M VF + ES +VVT+ +LI+GY+ G+V+ ++ M E+G NVVTY +LI
Sbjct: 245 M-VFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLI 303
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMD 347
+G C G ++EA+ + ++ K + + ++ G+C G+ +A++ M+ G+
Sbjct: 304 KGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVR 363
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
+ + ++N YCK G+ EA I M +KP ++N + ++EA+ L
Sbjct: 364 TNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKL 423
Query: 408 LKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
M + P ++Y+I++ G ++ G V L ML+ G N D + LL
Sbjct: 424 CDQMCQKEVVPTVMTYNILLKGYSRI-GAFHDVLSLWKMMLKRGVNADEISCSTLLEALF 482
Query: 468 EDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLKRCVDNT 519
+ GD A+K +++ + L + T + LC KV E K +DN
Sbjct: 483 KLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEA--KEILDNV 532
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 202/457 (44%), Gaps = 51/457 (11%)
Query: 97 DSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAK--ASGPCALSCNAVLGVLVRA 154
D+++ + + + + IN + G + A F + + P + N ++ RA
Sbjct: 355 DNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRA 414
Query: 155 NRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVF----------DEMR 204
V+ A + DQ+ ++ +V P V TY +++G+ ++G ++ DE+
Sbjct: 415 GYVDEALKLCDQMCQKEVV-PTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEIS 473
Query: 205 CEP----------------------------NAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
C + IT N MI GLCK +++ A + +
Sbjct: 474 CSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVN 533
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNV 296
+ C+P V T+ L GY K G ++EA + M+ +G P + YN LI G ++
Sbjct: 534 IFR-CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHL 592
Query: 297 DEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVI 356
++ ++ ++R +G+ VAT +++ G+C +G ++A EM+ +G+ L+V S I
Sbjct: 593 NKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKI 652
Query: 357 VNEYCKIGKPSEAVSILREMVA-KRMKPSVSSFNAVFR----VLVAERKLEEAVLLLKNM 411
N ++ K EA +L+++V + P S + +K+ E+V +
Sbjct: 653 ANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESV--ENST 710
Query: 412 PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNL-DATMYNCLLGGYCEDG 470
P+ PN + Y++ I GLCK G+++ +L S +L S + D Y L+ G G
Sbjct: 711 PKKLLVPNNIVYNVAIAGLCKA-GKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAG 769
Query: 471 DEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKV 507
D A +M K + N TY +K LC G V
Sbjct: 770 DINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNV 806
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 167/393 (42%), Gaps = 45/393 (11%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
+SC+ +L L + N A +++ V+ L+ D T MI G CKM V A+++ D
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLL-TDTITLNVMISGLCKMEKVNEAKEILD 530
Query: 202 EM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
+ RC+P TY + HG K G + A V + E K P + + TLI G K
Sbjct: 531 NVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAV-KEYMERKGIFPTIEMYNTLISGAFKY 589
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
+ + + + E++ +G P V TY ALI G C G +D+A +M KGI NV
Sbjct: 590 RHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNIC 649
Query: 319 TSMLKGFCMVGRSEEA----------------IKHMKEMVSRGMDLDVKA---------- 352
+ + + + +EA + +KE + +K
Sbjct: 650 SKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENS 709
Query: 353 ------------YSVIVNEYCKIGKPSEAVSILREMVAK-RMKPSVSSFNAVFRVLVAER 399
Y+V + CK GK +A + ++++ R P ++ +
Sbjct: 710 TPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAG 769
Query: 400 KLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMY 459
+ +A L M G PN ++Y+ +I GLCK+ G + + L+ + Q G +A Y
Sbjct: 770 DINKAFTLRDEMALKGIIPNIVTYNALIKGLCKL-GNVDRAQRLLHKLPQKGITPNAITY 828
Query: 460 NCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKD 492
N L+ G + G+ A++ MI+K + D
Sbjct: 829 NTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGSD 861
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 9/166 (5%)
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALN 266
PN I YN I GLCK G+++ A ++F+ S PD T+T LI G + G++ +A
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 267 CMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC 326
EM +G PN+VTYNALI+GLC GNVD A+R++ K+ KGI N T +++ G
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 327 MVGRSEEAIKHMKEMVSRGM--------DLDVKAYSVIVNEYCKIG 364
G EA++ ++M+ +G+ D+D+ V+++ K+G
Sbjct: 837 KSGNVAEAMRLKEKMIEKGLVRGSDKQGDVDIPK-EVVLDPEVKLG 881
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 194/410 (47%), Gaps = 44/410 (10%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ ++ L +AN A A+Y Q+V + D+ YT ++ G K G + A K
Sbjct: 292 PNHVTYTTLVDSLFKANIYRHALALYSQMVVRG-IPVDLVVYTVLMDGLFKAGDLREAEK 350
Query: 199 VFDEMRCE----PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDG 254
F +M E PN +TY ++ GLCK G++ A + + E KS P+VVT++++I+G
Sbjct: 351 TF-KMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLE-KSVIPNVVTYSSMING 408
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
Y K+G ++EA++ +++M++Q PN TY +I+GL +G + A + +MRL G+++N
Sbjct: 409 YVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEEN 468
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVS------------------------------- 343
+++ +GR +E +K+MVS
Sbjct: 469 NYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAE 528
Query: 344 ----RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAER 399
RGM DV +Y+V+++ K GK A + M K ++P +++FN + +
Sbjct: 529 EMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQG 587
Query: 400 KLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMY 459
E + L M G P+ +S +IV+ LC+ G+M+ +++ M+ + + T Y
Sbjct: 588 DSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCE-NGKMEEAIHILNQMMLMEIHPNLTTY 646
Query: 460 NCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
L + + KT ++ ++ Y T + LC G K+
Sbjct: 647 RIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKK 696
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 207/471 (43%), Gaps = 75/471 (15%)
Query: 112 SKFINAFGDRGDIRGAIH-----WFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIY 164
S+ N+ + ++ G +H + K A G P + N ++ + R++ A ++
Sbjct: 93 SRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL- 151
Query: 165 DQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCK 221
++ ++ D TY T+I G C+ G+ + A + EM P+ ++YNT+I G CK
Sbjct: 152 ---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCK 208
Query: 222 KGEMDGAMRV-------------------FNRFAESKSCR--------PDVVTFTTLIDG 254
G A + +N A ++ R PDVVTF+++I+
Sbjct: 209 VGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINR 268
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
K G+V E ++EM+E PN VTY L++ L + A + S+M ++GI +
Sbjct: 269 LCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVD 328
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
+ T ++ G G EA K K ++ +V Y+ +V+ CK G S A I+
Sbjct: 329 LVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIIT 388
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
+M+ K + P+V +++++ V + LEEAV LL+ M PN +Y VI GL K
Sbjct: 389 QMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAG 448
Query: 435 ----------------------------------GRMQLVEELVSSMLQSGHNLDATMYN 460
GR++ V+ LV M+ G LD Y
Sbjct: 449 KEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYT 508
Query: 461 CLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
L+ + + GDEE AL +M ++ ++ +Y + + GKV ++
Sbjct: 509 SLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADW 559
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 160/341 (46%), Gaps = 16/341 (4%)
Query: 173 VEPDVFTYTTMIRGFCKMGMV-ESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGA 228
V PD + ++I F G+V + ++ +M P+ N +IH CK G + A
Sbjct: 89 VVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFA 148
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
+ + ++ D VT+ T+I G + G EA + EM + G P+ V+YN LI+
Sbjct: 149 ISLL----RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLID 204
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
G C GN AK ++ ++ + N+ T+T +L + + EEA ++MV G D
Sbjct: 205 GFCKVGNFVRAKALVDEIS----ELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDP 257
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
DV +S I+N CK GK E +LREM + P+ ++ + L A+ L
Sbjct: 258 DVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY 317
Query: 409 KNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCE 468
M G + + Y++++ GL K G ++ E+ +L+ + Y L+ G C+
Sbjct: 318 SQMVVRGIPVDLVVYTVLMDGLFKA-GDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCK 376
Query: 469 DGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
GD A + M++KS + N TY + + KG ++E
Sbjct: 377 AGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEE 417
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 147/303 (48%), Gaps = 37/303 (12%)
Query: 168 VKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGE 224
++E +EPD+ T+ M+ K G E K++D+M+ +P+ ++ N ++ LC+ G+
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623
Query: 225 MDGAMRVFNRF-----------------AESKSCRPDVV-----------------TFTT 250
M+ A+ + N+ SK R D + + T
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG 310
LI K G ++A M +M+ +G P+ VT+N+L+ G + +V +A S M G
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743
Query: 311 IKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAV 370
I NVAT ++++G G +E K + EM SRGM D Y+ +++ KIG ++
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSM 803
Query: 371 SILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGL 430
+I EM+A + P S++N + K+ +A LLK M + G SPN +Y +I GL
Sbjct: 804 TIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGL 863
Query: 431 CKV 433
CK+
Sbjct: 864 CKL 866
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 178/366 (48%), Gaps = 7/366 (1%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM- 203
+A++ L R R+ K + +V + V D YT++I F K G E+A +EM
Sbjct: 473 DALVNHLKRIGRIKEVKGLVKDMVSKG-VTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ 531
Query: 204 -RCEP-NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
R P + ++YN +I G+ K G++ GA + E K PD+ TF +++ K+G+
Sbjct: 532 ERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMRE-KGIEPDIATFNIMMNSQRKQGDS 589
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
+ L +M+ G +P++++ N ++ LC +G ++EA ++++M L I N+ T
Sbjct: 590 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIF 649
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
L R++ K + ++S G+ L + Y+ ++ CK+G +A ++ +M A+
Sbjct: 650 LDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 709
Query: 382 KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVE 441
P +FN++ + +A+ M G SPN +Y+ +I GL G ++ V+
Sbjct: 710 IPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDA-GLIKEVD 768
Query: 442 ELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKEL 501
+ +S M G D YN L+ G + G+ + ++ +MI + TY + E
Sbjct: 769 KWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEF 828
Query: 502 CAKGKV 507
GK+
Sbjct: 829 ANVGKM 834
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 183/375 (48%), Gaps = 9/375 (2%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ ++++ L + +V L + + ++E V P+ TYTT++ K + A
Sbjct: 257 PDVVTFSSIINRLCKGGKV-LEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALA 315
Query: 199 VFDEM--RCEP-NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
++ +M R P + + Y ++ GL K G++ A + F E P+VVT+T L+DG
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQV-PNVVTYTALVDGL 374
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G++ A + +M E+ PNVVTY+++I G G ++EA ++ KM + + N
Sbjct: 375 CKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNG 434
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T +++ G G+ E AI+ KEM G++ + +VN +IG+ E ++++
Sbjct: 435 FTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKD 494
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
MV+K + ++ ++ V E A+ + M G + +SY+++I G+ K G
Sbjct: 495 MVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKF-G 553
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYC 495
++ + M + G D +N ++ + GD E LK ++D + + C
Sbjct: 554 KVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILK-LWDKMKSCGIKPSLMSC 611
Query: 496 TF-VKELCAKGKVKE 509
V LC GK++E
Sbjct: 612 NIVVGMLCENGKMEE 626
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 175/361 (48%), Gaps = 11/361 (3%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
IN G + A+ ++ SG P +C A++ L A +V+LA + + +K A
Sbjct: 155 LINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSA 214
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESA---RKVFDEMRCEPNAITYNTMIHGLCKKGEMDGA 228
V+ Y +I GFCK G +E A + ++ CEP+ +TYN +++ + A
Sbjct: 215 RVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRA 274
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM-KEMQEQG-CQPNVVTYNAL 286
V S + D ++ L+ + + + N M KEM+ +G C +VV+Y+ L
Sbjct: 275 EGVMAEMVRS-GIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC--DVVSYSTL 331
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
IE C + N +A R+ +MR KG+ NV T TS++K F G S A K + +M G+
Sbjct: 332 IETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGL 391
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
D Y+ I++ CK G +A + +M+ + P S+N++ L ++ EA+
Sbjct: 392 SPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIK 451
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGY 466
L ++M C P+ L++ +I GL + K ++ ++ M+ G LD + + L+
Sbjct: 452 LFEDMKGKECCPDELTFKFIIGGLIRGK-KLSAAYKVWDQMMDKGFTLDRDVSDTLIKAS 510
Query: 467 C 467
C
Sbjct: 511 C 511
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 167/351 (47%), Gaps = 7/351 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + N L +L R N+V A + +V+ EPDV +YT +I G + G V A +
Sbjct: 112 PDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGR-EPDVVSYTILINGLFRAGKVTDAVE 170
Query: 199 VFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+++ M P+ ++ GLC ++D A + +S + V + LI G+
Sbjct: 171 IWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGF 230
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G +++A M + GC+P++VTYN L+ + + A+ +M++M GI+ +
Sbjct: 231 CKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDA 290
Query: 316 ATNTSMLKGFCMVGRSEEAIKHM-KEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
+ +LK C V ++ M KEM RG DV +YS ++ +C+ +A +
Sbjct: 291 YSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFE 349
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
EM K M +V ++ ++ + + E A LL M +G SP+ + Y+ ++ LCK
Sbjct: 350 EMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK-S 408
Query: 435 GRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDK 485
G + + + M++ DA YN L+ G C G A+K DM K
Sbjct: 409 GNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 190/429 (44%), Gaps = 44/429 (10%)
Query: 122 GDIRGAIHWFHKAKASGPCALSC--NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFT 179
G I A+ F + + S S N +GVLVR +R LA+AIY + K FT
Sbjct: 23 GMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM-KPMGFSLIPFT 81
Query: 180 YTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
Y+ I G CK+ + + +M P+ +N + LC++ ++ A++ F
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNV 296
+ + PDVV++T LI+G + G+V +A+ M G P+ AL+ GLC + V
Sbjct: 142 Q-RGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200
Query: 297 DEAKRMMSK-MRLKGIKDNVATNTSMLKGFCMVGRSE--EAIKH---------------- 337
D A M+++ ++ +K + +++ GFC GR E EA+K
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNV 260
Query: 338 -----------------MKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKR 380
M EMV G+ LD +Y+ ++ +C++ P + + + + + R
Sbjct: 261 LLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPR 320
Query: 381 MKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLV 440
V S++ + +A L + M + G N ++Y+ +I + +G +
Sbjct: 321 GFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLR-EGNSSVA 379
Query: 441 EELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKE 500
++L+ M + G + D Y +L C+ G+ + A DMI+ + +Y + +
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISG 439
Query: 501 LCAKGKVKE 509
LC G+V E
Sbjct: 440 LCRSGRVTE 448
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 109/221 (49%), Gaps = 10/221 (4%)
Query: 150 VLVRANRVNLAKAIYDQVVKEALVEP----DVFTYTTMIRGFCKMGMVESARKVFDEMRC 205
+L R RV+ Y+ +VKE +EP DV +Y+T+I FC+ A ++F+EMR
Sbjct: 296 LLKRHCRVSHPDKCYNFMVKE--MEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQ 353
Query: 206 EP---NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQ 262
+ N +TY ++I ++G A ++ ++ E PD + +TT++D K G V
Sbjct: 354 KGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTEL-GLSPDRIFYTTILDHLCKSGNVD 412
Query: 263 EALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSML 322
+A +M E P+ ++YN+LI GLC SG V EA ++ M+ K + T ++
Sbjct: 413 KAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFII 472
Query: 323 KGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKI 363
G + A K +M+ +G LD ++ C +
Sbjct: 473 GGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSM 513
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 2/231 (0%)
Query: 246 VTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSK 305
+ + + I K G + A+ EM+ + YN I L + A+ +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 306 MRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGK 365
M+ G T + + G C V + + + +M + G D+ A++V ++ C+ K
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 366 PSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSI 425
AV MV + +P V S+ + L K+ +AV + M R G SP+ + +
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 426 VICGLCKVKGRMQLVEELVSSMLQSGH-NLDATMYNCLLGGYCEDGDEEMA 475
++ GLC + ++ L E+V+ ++S L +YN L+ G+C+ G E A
Sbjct: 190 LVVGLCHAR-KVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKA 239
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 206/441 (46%), Gaps = 21/441 (4%)
Query: 43 VTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRS----CYAAITDVLLSHSLFSTADS 98
+ +++ ++P A+ F NP P N P CY I L +F D
Sbjct: 12 LASLLRRENDPSAAMKLFR---NPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQ 68
Query: 99 LL---RRSNKL--SDFLASKFINAFGDRGDIRG-AIHWFHKAKASGPCALSCNAVLGVLV 152
+L + ++ ++ + IN FG RG + A+H F + C + ++ +L
Sbjct: 69 VLLHLKTDTRIVPTEIIFCNVINFFG-RGKLPSRALHMFDEMPQYR-CQRTVKSLNSLLS 126
Query: 153 RANRVNLAKAIYDQVVK-EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPN 208
+ + + +++ + +PD TY +I G + G + A K+FDEM + +P
Sbjct: 127 ALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPT 186
Query: 209 AITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM 268
+T+ T+IHGLCK + A+++ + + RP V + +LI + GE+ A
Sbjct: 187 GVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLK 246
Query: 269 KEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMV 328
E E + + Y+ LI L +G +E ++ +M KG K + T ++ GFC+
Sbjct: 247 DEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVE 306
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSF 388
SE A + + EMV +G+ DV +Y++I+ + +I K EA + +M + P S+
Sbjct: 307 NDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSY 366
Query: 389 NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
VF L + EEA ++L M G P + LC+ G+++++ +++SS L
Sbjct: 367 RIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCE-SGKLEILSKVISS-L 424
Query: 449 QSGHNLDATMYNCLLGGYCED 469
G DA +++ ++ C++
Sbjct: 425 HRGIAGDADVWSVMIPTMCKE 445
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 38/304 (12%)
Query: 206 EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL 265
+P+A TYN +IHG + G D A+++F+ + K +P VTF TLI G K V+EAL
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKK-VKPTGVTFGTLIHGLCKDSRVKEAL 207
Query: 266 NCMKEM-QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKG 324
+M + G +P V Y +LI+ LC G + A ++ + IK + A ++++
Sbjct: 208 KMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISS 267
Query: 325 FCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPS 384
GRS E ++EM +G D Y+V++N +C A +L EMV K +KP
Sbjct: 268 LIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD 327
Query: 385 VSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELV 444
V S+N + V +K EEA L ++MPR GCSP+ LSY IV
Sbjct: 328 VISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIV------------------ 369
Query: 445 SSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAK 504
G CE E A + +M+ K + +D F+++LC
Sbjct: 370 ------------------FDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCES 411
Query: 505 GKVK 508
GK++
Sbjct: 412 GKLE 415
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 116/235 (49%), Gaps = 6/235 (2%)
Query: 146 AVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR- 204
+++ L + ++ A + D+ E ++ D Y+T+I K G + +EM
Sbjct: 228 SLIKALCQIGELSFAFKLKDEAY-EGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSE 286
Query: 205 --CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQ 262
C+P+ +TYN +I+G C + + + A RV + E K +PDV+++ ++ + + + +
Sbjct: 287 KGCKPDTVTYNVLINGFCVENDSESANRVLDEMVE-KGLKPDVISYNMILGVFFRIKKWE 345
Query: 263 EALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSML 322
EA ++M +GC P+ ++Y + +GLC +EA ++ +M KG K L
Sbjct: 346 EATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFL 405
Query: 323 KGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMV 377
+ C G+ E K + + RG+ D +SV++ CK S+++ +L V
Sbjct: 406 QKLCESGKLEILSKVISSL-HRGIAGDADVWSVMIPTMCKEPVISDSIDLLLNTV 459
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 120/279 (43%), Gaps = 3/279 (1%)
Query: 210 ITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK 269
+ Y+ +I L D +V P + F +I+ + + AL+
Sbjct: 48 LCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFD 107
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG 329
EM + CQ V + N+L+ L G +++ K +S + G K + T ++ G G
Sbjct: 108 EMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSG 166
Query: 330 RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMV-AKRMKPSVSSF 388
++A+K EMV + + + +++ CK + EA+ + +M+ ++P+V +
Sbjct: 167 CFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIY 226
Query: 389 NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
++ + L +L A L + YS +I L K GR V ++ M
Sbjct: 227 ASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKA-GRSNEVSMILEEMS 285
Query: 449 QSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSF 487
+ G D YN L+ G+C + D E A + + +M++K
Sbjct: 286 EKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/512 (23%), Positives = 222/512 (43%), Gaps = 60/512 (11%)
Query: 43 VTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRR 102
+ ++I + + AL F WAS + H RS Y A+ L F T LL
Sbjct: 46 IVRLILDQKSASGALETFRWASTFP----GFIHSRSTYRALFHKLCVFRRFDTVYQLLDE 101
Query: 103 ---SNKL--SDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRAN 155
S L D + I FG I+ I G P N++L VLV+ +
Sbjct: 102 MPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED 161
Query: 156 RVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITY 212
+++A+ + + + + + DV+TY +++G + K+ M+ PNA+ Y
Sbjct: 162 -IDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVY 220
Query: 213 NTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQ 272
NT++H LCK G++ A + + E P+ VTF LI Y ++ +++ +++
Sbjct: 221 NTLLHALCKNGKVGRARSLMSEMKE-----PNDVTFNILISAYCNEQKLIQSMVLLEKCF 275
Query: 273 EQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSE 332
G P+VVT ++E LC G V EA ++ ++ KG K +V +++KG+C +G+
Sbjct: 276 SLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMR 335
Query: 333 EAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVF 392
A + EM +G +V+ Y++++ YC +G A+ +M ++ + ++FN +
Sbjct: 336 VAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLI 395
Query: 393 RVL-------------------------------------VAERKLEEAVLLLKNMPRMG 415
R L E + E+A+ L M ++
Sbjct: 396 RGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKL- 454
Query: 416 CSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMA 475
P + S + LC+ KG M ++ M+ G + +CL+ Y + G E +
Sbjct: 455 -FPRAVDRSFKLISLCE-KGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEES 512
Query: 476 LKTVYDMIDKSFLFNKDTYCTFVKELCAKGKV 507
L+ + DM+ + +L T+ + C + KV
Sbjct: 513 LELINDMVTRGYLPRSSTFNAVIIGFCKQDKV 544
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 161/380 (42%), Gaps = 42/380 (11%)
Query: 80 YAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG- 138
Y + L + A SL+ + +D + I+A+ + + ++ K + G
Sbjct: 220 YNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGF 279
Query: 139 -PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESAR 197
P ++ V+ VL RV+ A + ++V + + DV T+++G+C +G + A+
Sbjct: 280 VPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG-GKVDVVACNTLVKGYCALGKMRVAQ 338
Query: 198 KVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDG 254
+ F EM + PN TYN +I G C G +D A+ FN ++ + R + TF TLI G
Sbjct: 339 RFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDM-KTDAIRWNFATFNTLIRG 397
Query: 255 YSKRGEVQEALNCMKEMQEQGC--QPNVVTYNALIEG----------------------- 289
S G + L ++ MQ+ + YN +I G
Sbjct: 398 LSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPR 457
Query: 290 ----------LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMK 339
LC G +D+ K +M +G ++ + ++ + G+ EE+++ +
Sbjct: 458 AVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELIN 517
Query: 340 EMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAER 399
+MV+RG ++ ++ +CK K + + +M + P S+N + L +
Sbjct: 518 DMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKG 577
Query: 400 KLEEAVLLLKNMPRMGCSPN 419
+++A LL M P+
Sbjct: 578 DIQKAWLLFSRMVEKSIVPD 597
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 145/320 (45%), Gaps = 40/320 (12%)
Query: 111 ASKFINAFGDRGDIRGAIHWFHKAKASGPCA--LSCNAVLGVLVRANRVNLAKAIYDQVV 168
+K + + G + A+ + ++ G ++CN ++ ++ +A+ + ++
Sbjct: 286 VTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEME 345
Query: 169 KEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEP---NAITYNTMIHGLCKKGEM 225
++ + P+V TY +I G+C +GM++SA F++M+ + N T+NT+I GL G
Sbjct: 346 RKGYL-PNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRT 404
Query: 226 DGAMRVFNRFAESKSCR-PDVVTFTTLIDGYSKRGEVQEALNCMKEMQE----------- 273
D +++ +S + + + +I G+ K ++AL + +M++
Sbjct: 405 DDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFK 464
Query: 274 ----------------------QGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
+G P+++ + LI G ++E+ +++ M +G
Sbjct: 465 LISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGY 524
Query: 312 KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVS 371
+T +++ GFC + IK +++M RG D ++Y+ ++ E C G +A
Sbjct: 525 LPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWL 584
Query: 372 ILREMVAKRMKPSVSSFNAV 391
+ MV K + P S ++++
Sbjct: 585 LFSRMVEKSIVPDPSMWSSL 604
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 80/144 (55%), Gaps = 6/144 (4%)
Query: 187 FCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRP 243
C+ G ++ + +D+M E P+ I + +IH + G+++ ++ + N ++ P
Sbjct: 468 LCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMV-TRGYLP 526
Query: 244 DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMM 303
TF +I G+ K+ +V + +++M E+GC P+ +YN L+E LC+ G++ +A +
Sbjct: 527 RSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLF 586
Query: 304 SKMRLKGIKDNVATNTSMLKGFCM 327
S+M K I + + +S++ FC+
Sbjct: 587 SRMVEKSIVPDPSMWSSLM--FCL 608
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 183/383 (47%), Gaps = 48/383 (12%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVR-ANRVNLAKAIYDQVV 168
+ I+AF + G R A++ F K + G P ++ N +L V + N ++ +++
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 169 KEALVEPDVFTYTTMIRGFCKMGMV-ESARKVFDEMRC---------------------- 205
+ + PD +TY T+I CK G + + A +VF+EM+
Sbjct: 272 SDGIA-PDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 206 ----------------EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
P+ +TYN++I + G +D AM + N+ AE K +PDV T+T
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE-KGTKPDVFTYT 388
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
TL+ G+ + G+V+ A++ +EM+ GC+PN+ T+NA I+ G E ++ ++ +
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
G+ ++ T ++L F G E KEM G + + ++ +++ Y + G +A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICG 429
+++ R M+ + P +S++N V L E++ +L M C PN L+Y ++
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 430 LCKVK--GRMQ-LVEELVSSMLQ 449
K G M L EE+ S +++
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIE 591
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 191/449 (42%), Gaps = 80/449 (17%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ N+++ R ++ A + +Q+ ++ +PDVFTYTT++ GF + G VESA
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKG-TKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNR--------------------- 234
+F+EMR C+PN T+N I +G+ M++F+
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 235 -----------FAESKSCR--PDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVV 281
F E K P+ TF TLI YS+ G ++A+ + M + G P++
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 282 TYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC--------------- 326
TYN ++ L G +++++++++M K N T S+L +
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 327 -----------------------MVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKI 363
++ +E A +KE RG D+ + +V+ Y +
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE---RGFSPDITTLNSMVSIYGRR 642
Query: 364 GKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSY 423
++A +L M + PS++++N++ + ++ +L+ + G P+ +SY
Sbjct: 643 QMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISY 702
Query: 424 SIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMI 483
+ VI C+ RM+ + S M SG D YN +G Y D E A+ V MI
Sbjct: 703 NTVIYAYCR-NTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMI 761
Query: 484 DKSFLFNKDTYCTFVKELCAKGKVKEEYL 512
N++TY + V C + E L
Sbjct: 762 KHGCRPNQNTYNSIVDGYCKLNRKDEAKL 790
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 192/410 (46%), Gaps = 22/410 (5%)
Query: 127 AIHWFHKAKASGPCALSCNAVLGVLV----RANRVNLAKAIYDQVVKEALVEPDVFTYTT 182
A WF K K ++ N+V+ +++ + RV+ A +++ + ++ DV++YT+
Sbjct: 157 AFDWFMKQKDYQ--SMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGF-SLDVYSYTS 213
Query: 183 MIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESK 239
+I F G A VF +M C+P ITYN +++ K G + +S
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 240 SCRPDVVTFTTLIDGYSKRGEV-QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDE 298
PD T+ TLI KRG + QEA +EM+ G + VTYNAL++ S E
Sbjct: 274 GIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 299 AKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVN 358
A +++++M L G ++ T S++ + G +EA++ +M +G DV Y+ +++
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 359 EYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSP 418
+ + GK A+SI EM KP++ +FNA ++ K E + + + G SP
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 419 NFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKT 478
+ ++++ ++ + G V + M ++G + +N L+ Y G E A+
Sbjct: 453 DIVTWNTLLAVFGQ-NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 479 VYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLK--------RCVDNTL 520
M+D + TY T + L A+G + E+ K RC N L
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAAL-ARGGMWEQSEKVLAEMEDGRCKPNEL 560
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 163/337 (48%), Gaps = 16/337 (4%)
Query: 118 FGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEP 175
FG G F + K +G P + N ++ R A +Y +++ +A V P
Sbjct: 464 FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML-DAGVTP 522
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVF 232
D+ TY T++ + GM E + KV EM RC+PN +TY +++H E+ G M
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI-GLMHSL 581
Query: 233 NRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCL 292
S P V TL+ SK + EA E++E+G P++ T N+++
Sbjct: 582 AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGR 641
Query: 293 SGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM---VGRSEEAIKHMKEMVSRGMDLD 349
V +A ++ M+ +G ++AT S++ G+SEE ++E++++G+ D
Sbjct: 642 RQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI---LREILAKGIKPD 698
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
+ +Y+ ++ YC+ + +A I EM + P V ++N A+ EEA+ +++
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQ---LVEEL 443
M + GC PN +Y+ ++ G CK+ + + VE+L
Sbjct: 759 YMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 212/490 (43%), Gaps = 54/490 (11%)
Query: 38 LTPSLVTQVIKNTHNPHHALFFFNWA--SNPQPNPNNYSHPRSCYAAITDVLLSHSLFST 95
+T + + V +H P A+ N + P+ Y+ S YA D +L ++
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA--RDGMLDEAM-EL 371
Query: 96 ADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVR 153
+ + + K F + ++ F G + A+ F + + +G P + NA + +
Sbjct: 372 KNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGN 431
Query: 154 ANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAI 210
+ I+D++ L PD+ T+ T++ F + GM VF EM+ P
Sbjct: 432 RGKFTEMMKIFDEINVCGL-SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE 490
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKE 270
T+NT+I + G + AM V+ R ++ PD+ T+ T++ ++ G +++ + E
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549
Query: 271 MQEQGCQPNVVTYNALIEGLC---------------LSGNVD------------------ 297
M++ C+PN +TY +L+ SG ++
Sbjct: 550 MEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDL 609
Query: 298 --EAKRMMSKMRLKGIKDNVATNTSMLKGFC---MVGRSEEAIKHMKEMVSRGMDLDVKA 352
EA+R S+++ +G ++ T SM+ + MV ++ + +MKE RG +
Sbjct: 610 LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKE---RGFTPSMAT 666
Query: 353 YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
Y+ ++ + + ++ ILRE++AK +KP + S+N V ++ +A + M
Sbjct: 667 YNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR 726
Query: 413 RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDE 472
G P+ ++Y+ I G + +V M++ G + YN ++ GYC+ +
Sbjct: 727 NSGIVPDVITYNTFI-GSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRK 785
Query: 473 EMALKTVYDM 482
+ A V D+
Sbjct: 786 DEAKLFVEDL 795
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 5/178 (2%)
Query: 133 KAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGM 192
K + P + N+++ + R V A + D +KE P + TY +++ +
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLD-YMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 193 VESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
+ ++ E+ + P+ I+YNT+I+ C+ M A R+F+ S PDV+T+
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS-GIVPDVITYN 738
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR 307
T I Y+ +EA+ ++ M + GC+PN TYN++++G C DEAK + +R
Sbjct: 739 TFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 11/232 (4%)
Query: 285 ALIEGLCLSGNVDEAKR----MMSKMRLKGIKDN--VATNTSMLKGFCMVGRSEEAIKHM 338
A ++GL D A R M + + + DN VA SML GR A
Sbjct: 140 AFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLG---KEGRVSSAANMF 196
Query: 339 KEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVA- 397
+ G LDV +Y+ +++ + G+ EAV++ ++M KP++ ++N + V
Sbjct: 197 NGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKM 256
Query: 398 ERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDAT 457
+ L++ M G +P+ +Y+ +I CK Q ++ M +G + D
Sbjct: 257 GTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKV 315
Query: 458 MYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
YN LL Y + + A+K + +M+ F + TY + + G + E
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDE 367
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 179/369 (48%), Gaps = 6/369 (1%)
Query: 143 SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDE 202
SC+ ++ L R ++++ A I +V V PD TY +I CK G + +A + ++
Sbjct: 141 SCSNLVRGLARIDQLDKAMCILRVMVMSGGV-PDTITYNMIIGNLCKKGHIRTALVLLED 199
Query: 203 MRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRG 259
M P+ ITYNT+I + G + A+R F + C P ++T+T L++ +
Sbjct: 200 MSLSGSPPDVITYNTVIRCMFDYGNAEQAIR-FWKDQLQNGCPPFMITYTVLVELVCRYC 258
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
A+ +++M +GC P++VTYN+L+ C GN++E ++ + G++ N T
Sbjct: 259 GSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYN 318
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
++L C +E + + M V Y++++N CK S A+ +M+ +
Sbjct: 319 TLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQ 378
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
+ P + ++N V + E +++A+ LL + C P ++Y+ VI GL K KG M+
Sbjct: 379 KCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAK-KGLMKK 437
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
EL ML +G D L+ G+C E A + + + ++ TY ++
Sbjct: 438 ALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQ 497
Query: 500 ELCAKGKVK 508
LC K +++
Sbjct: 498 GLCKKKEIE 506
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 127/258 (49%), Gaps = 5/258 (1%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ N+++ R + ++ ++ L E + TY T++ C + +
Sbjct: 277 PDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGL-ELNTVTYNTLLHSLCSHEYWDEVEE 335
Query: 199 VFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+ + M P ITYN +I+GLCK + A+ F + E K C PD+VT+ T++
Sbjct: 336 ILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK-CLPDIVTYNTVLGAM 394
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
SK G V +A+ + ++ C P ++TYN++I+GL G + +A + +M GI +
Sbjct: 395 SKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDD 454
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T S++ GFC EEA + +KE +RG + Y +++ CK + A+ ++
Sbjct: 455 ITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEI 514
Query: 376 MVAKRMKPSVSSFNAVFR 393
M+ KP + + A+ +
Sbjct: 515 MLTGGCKPDETIYTAIVK 532
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 147/304 (48%), Gaps = 2/304 (0%)
Query: 206 EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL 265
E + T N ++H LC G++ A ++ A P + + L+ G ++ ++ +A+
Sbjct: 101 ENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQV-PHFPSCSNLVRGLARIDQLDKAM 159
Query: 266 NCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGF 325
++ M G P+ +TYN +I LC G++ A ++ M L G +V T ++++
Sbjct: 160 CILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCM 219
Query: 326 CMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSV 385
G +E+AI+ K+ + G + Y+V+V C+ + A+ +L +M + P +
Sbjct: 220 FDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDI 279
Query: 386 SSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVS 445
++N++ LEE +++++ G N ++Y+ ++ LC + VEE+++
Sbjct: 280 VTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHE-YWDEVEEILN 338
Query: 446 SMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKG 505
M Q+ + YN L+ G C+ A+ Y M+++ L + TY T + + +G
Sbjct: 339 IMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEG 398
Query: 506 KVKE 509
V +
Sbjct: 399 MVDD 402
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 92/189 (48%), Gaps = 38/189 (20%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ N ++ L +A ++ A + Q++++ + PD+ TY T++ K GMV+ A +
Sbjct: 347 PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCL-PDIVTYNTVLGAMSKEGMVDDAIE 405
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKS--------------C 241
+ ++ C P ITYN++I GL KKG M A+ ++++ ++ C
Sbjct: 406 LLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFC 465
Query: 242 RPDVV--------------------TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVV 281
R ++V T+ +I G K+ E++ A+ ++ M GC+P+
Sbjct: 466 RANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDET 525
Query: 282 TYNALIEGL 290
Y A+++G+
Sbjct: 526 IYTAIVKGV 534
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ N+V+ L + + A +Y Q++ +A + PD T ++I GFC+ +VE A +
Sbjct: 417 PGLITYNSVIDGLAKKGLMKKALELYHQML-DAGIFPDDITRRSLIYGFCRANLVEEAGQ 475
Query: 199 VFDEMRCEPNAI---TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
V E N I TY +I GLCKK E++ A+ V + C+PD +T ++ G
Sbjct: 476 VLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVV-EIMLTGGCKPDETIYTAIVKGV 534
Query: 256 SKRGEVQEAL 265
+ G EA+
Sbjct: 535 EEMGMGSEAV 544
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 185/375 (49%), Gaps = 15/375 (4%)
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEP 207
L+ R A +I++ +++E +P + TYTT++ + S + ++ +P
Sbjct: 329 LIERGRPQEAHSIFNTLIEEGH-KPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKP 387
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
+ I +N +I+ + G +D AM++F + ES C+P TF TLI GY K G+++E+
Sbjct: 388 DTILFNAIINASSESGNLDQAMKIFEKMKES-GCKPTASTFNTLIKGYGKIGKLEESSRL 446
Query: 268 MKEM-QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC 326
+ M +++ QPN T N L++ C ++EA ++ KM+ G+K +V T ++ K +
Sbjct: 447 LDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYA 506
Query: 327 MVGRS---EEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKP 383
+G + E+ I + M+ + +V+ IVN YC+ GK EA+ M + P
Sbjct: 507 RIGSTCTAEDMI--IPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHP 564
Query: 384 SVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEEL 443
++ FN++ + + ++ ++ M G P+ +++S ++ V G M+ EE+
Sbjct: 565 NLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV-GDMKRCEEI 623
Query: 444 VSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCA 503
+ ML+ G + D ++ L GY G+ E A + + M N Y + C+
Sbjct: 624 YTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCS 683
Query: 504 KGKVKEE---YLKRC 515
G++K+ Y K C
Sbjct: 684 AGEMKKAMQVYKKMC 698
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 202/412 (49%), Gaps = 12/412 (2%)
Query: 53 PHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLAS 112
P A FN P+ ++ + A+T HSL S + + K L +
Sbjct: 335 PQEAHSIFNTLIEEGHKPSLITY-TTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFN 393
Query: 113 KFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKE 170
INA + G++ A+ F K K SG P A + N ++ + ++ + + D ++++
Sbjct: 394 AIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRD 453
Query: 171 ALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDG 227
+++P+ T +++ +C +E A + +M+ +P+ +T+NT+ + G
Sbjct: 454 EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCT 513
Query: 228 AMR-VFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
A + R +K +P+V T T+++GY + G+++EAL M+E G PN+ +N+L
Sbjct: 514 AEDMIIPRMLHNK-VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSL 572
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
I+G ++D ++ M G+K +V T ++++ + VG + + +M+ G+
Sbjct: 573 IKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGI 632
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
D D+ A+S++ Y + G+P +A IL +M ++P+V + + + ++++A+
Sbjct: 633 DPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQ 692
Query: 407 LLKNM-PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDAT 457
+ K M +G SPN +Y +I G + K + EEL+ M G N+ T
Sbjct: 693 VYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWK-AEELLKDM--EGKNVVPT 741
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 121/253 (47%), Gaps = 6/253 (2%)
Query: 244 DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMM 303
DV + T L++G +RG QEA + + E+G +P+++TY L+ L + ++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 304 SKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKI 363
SK+ G+K + +++ G ++A+K ++M G ++ ++ Y KI
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 364 GKPSEAVSILREMVAKRM-KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLS 422
GK E+ +L M+ M +P+ + N + + +RK+EEA ++ M G P+ ++
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 423 YSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDM 482
++ + ++ + ++ ML + + ++ GYCE+G E AL+ Y M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 483 IDKS-----FLFN 490
+ F+FN
Sbjct: 558 KELGVHPNLFVFN 570
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 113/224 (50%), Gaps = 8/224 (3%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
+N + + G + A+ +F++ K G P N+++ + N ++ + D +++E
Sbjct: 537 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVD-LMEEF 595
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGA 228
V+PDV T++T++ + +G ++ +++ +M +P+ ++ + G + GE + A
Sbjct: 596 GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKA 655
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM-QEQGCQPNVVTYNALI 287
++ N+ + RP+VV +T +I G+ GE+++A+ K+M G PN+ TY LI
Sbjct: 656 EQILNQMRKF-GVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLI 714
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRS 331
G + +A+ ++ M K + T + G+ +G S
Sbjct: 715 WGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVS 758
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 10/165 (6%)
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMD 226
E ++PD+ ++ + +G+ + G E A ++ ++MR PN + Y +I G C GEM
Sbjct: 629 EGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMK 688
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
AM+V+ + P++ T+ TLI G+ + + +A +K+M+ + P T +
Sbjct: 689 KAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLI 748
Query: 287 IEGLCLSG--NVDEAKRMMSKMRLKG---IKDNVATNTS--MLKG 324
+G G N ++A + S I +N+A++ S LKG
Sbjct: 749 ADGWKSIGVSNSNDANTLGSSFSTSSKLNIPNNIASSRSPLFLKG 793
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 166/361 (45%), Gaps = 8/361 (2%)
Query: 128 IHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGF 187
W + P A A+LGVL R N+ +LA I+ + E V V Y M+ +
Sbjct: 178 FEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRA--EPTVGDRVQVYNAMMGVY 235
Query: 188 CKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRV-FNRFAESKSCRP 243
+ G A+++ D MR C P+ I++NT+I+ K G + + V + RP
Sbjct: 236 SRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRP 295
Query: 244 DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMM 303
D +T+ TL+ S+ + A+ ++M+ CQP++ TYNA+I G EA+R+
Sbjct: 296 DAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLF 355
Query: 304 SKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKI 363
++ LKG + T S+L F +E+ + ++M G D Y+ I++ Y K
Sbjct: 356 MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQ 415
Query: 364 GKPSEAVSILREMVAKRMK-PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLS 422
G+ A+ + ++M + P ++ + L + EA L+ M +G P +
Sbjct: 416 GQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQT 475
Query: 423 YSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDM 482
YS +ICG K G+ + E+ S ML+SG D Y+ +L + A DM
Sbjct: 476 YSALICGYAKA-GKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Query: 483 I 483
I
Sbjct: 535 I 535
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 182/363 (50%), Gaps = 10/363 (2%)
Query: 127 AIHWFHKAKAS-GPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIR 185
A+ F +A+ + G NA++GV R+ + + A+ + D + + V PD+ ++ T+I
Sbjct: 210 AVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCV-PDLISFNTLIN 268
Query: 186 GFCKMGMVES--ARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKS 240
K G + A ++ D +R P+AITYNT++ + +DGA++VF E+
Sbjct: 269 ARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDM-EAHR 327
Query: 241 CRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAK 300
C+PD+ T+ +I Y + G EA E++ +G P+ VTYN+L+ N ++ K
Sbjct: 328 CQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVK 387
Query: 301 RMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVS-RGMDLDVKAYSVIVNE 359
+ +M+ G + T +++ + G+ + A++ K+M G + D Y+V+++
Sbjct: 388 EVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDS 447
Query: 360 YCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPN 419
K + EA +++ EM+ +KP++ +++A+ K EEA M R G P+
Sbjct: 448 LGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPD 507
Query: 420 FLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTV 479
L+YS+++ L + + L M+ GH T+Y ++ G ++ + KT+
Sbjct: 508 NLAYSVMLDVLLR-GNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTI 566
Query: 480 YDM 482
DM
Sbjct: 567 RDM 569
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 195/411 (47%), Gaps = 21/411 (5%)
Query: 80 YAAITDVLLSHSLFSTADSL---LRRSNKLSDFLA-SKFINAFGDRGDIRG--AIHWFHK 133
Y A+ V FS A L +R+ + D ++ + INA G + A+
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 134 AKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMG 191
+ SG P A++ N +L R + ++ A +++ + + +PD++TY MI + + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDM-EAHRCQPDLWTYNAMISVYGRCG 346
Query: 192 MVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTF 248
+ A ++F E+ + P+A+TYN++++ ++ + V+ + + D +T+
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM-QKMGFGKDEMTY 405
Query: 249 TTLIDGYSKRGEVQEALNCMKEMQE-QGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR 307
T+I Y K+G++ AL K+M+ G P+ +TY LI+ L + EA +MS+M
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Query: 308 LKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPS 367
GIK + T ++++ G+ G+ EEA M+ G D AYSV+++ + +
Sbjct: 466 DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETR 525
Query: 368 EAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI 427
+A + R+M++ PS + + + L+ E + ++ +++M + C N L S V+
Sbjct: 526 KAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEEL-CGMNPLEISSVL 584
Query: 428 CGLCKVKGR-MQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALK 477
VKG L + + +G+ L+ +LG Y G A +
Sbjct: 585 -----VKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFE 630
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 138/306 (45%), Gaps = 6/306 (1%)
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALN 266
PNA ++ L + + A+ +F R + R V + ++ YS+ G+ +A
Sbjct: 189 PNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDR--VQVYNAMMGVYSRSGKFSKAQE 246
Query: 267 CMKEMQEQGCQPNVVTYNALIEGLCLSGNV--DEAKRMMSKMRLKGIKDNVATNTSMLKG 324
+ M+++GC P+++++N LI SG + + A ++ +R G++ + T ++L
Sbjct: 247 LVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSA 306
Query: 325 FCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPS 384
+ A+K ++M + D+ Y+ +++ Y + G +EA + E+ K P
Sbjct: 307 CSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPD 366
Query: 385 VSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELV 444
++N++ ER E+ + + M +MG + ++Y+ +I K +G++ L +L
Sbjct: 367 AVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGK-QGQLDLALQLY 425
Query: 445 SSMLQ-SGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCA 503
M SG N DA Y L+ + A + +M+D TY +
Sbjct: 426 KDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAK 485
Query: 504 KGKVKE 509
GK +E
Sbjct: 486 AGKREE 491
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 142/343 (41%), Gaps = 47/343 (13%)
Query: 182 TMIRGFCKMGMVESARKVFDEMR-------CEPNAITYNTMIHGLCKKGEMDGAMRVFNR 234
+M+ +CK+G E+A +V ++ C P Y +I K+ A V
Sbjct: 721 SMVVVYCKLGFPETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGN 777
Query: 235 FAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSG 294
+S PD+ T+ +L+ Y++ G + A M G P V + N L+ LC+ G
Sbjct: 778 LRQSGRT-PDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDG 836
Query: 295 NVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYS 354
++E ++ +++ G K + ++ ML F G E K M + G ++ Y
Sbjct: 837 RLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYR 896
Query: 355 VIVNEYCKIGKPSEAVSILREM------------------------------VAKRMK-- 382
+++ CK + +A ++ EM V +R+K
Sbjct: 897 MMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKET 956
Query: 383 ---PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
P +++N + + +R+ EE LL++ M +G P +Y +I K K ++
Sbjct: 957 GLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKC-LEQ 1015
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDM 482
E+L +L G LD + Y+ ++ + G + A K + M
Sbjct: 1016 AEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMM 1058
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 175/398 (43%), Gaps = 15/398 (3%)
Query: 78 SCYAAITDVLLSHS---LFSTADSL---LRRSNKLSDF-LASKFINAFGDRGDIRGAIHW 130
+C TD++ ++ L+ A+S+ LR+S + D + ++A+ G A
Sbjct: 750 ACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAI 809
Query: 131 FHKAKASGPCAL--SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFC 188
F+ GP S N +L L R+ + +++ ++ + + M+ F
Sbjct: 810 FNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEEL-QDMGFKISKSSILLMLDAFA 868
Query: 189 KMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDV 245
+ G + +K++ M+ P Y MI LCK + A + + E+ + + ++
Sbjct: 869 RAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEA-NFKVEL 927
Query: 246 VTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSK 305
+ +++ Y+ + ++ + + ++E G +P+ TYN LI C +E +M +
Sbjct: 928 AIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQ 987
Query: 306 MRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGK 365
MR G+ + T S++ F E+A + +E++S+G+ LD Y ++ G
Sbjct: 988 MRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGS 1047
Query: 366 PSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSI 425
S+A +L+ M ++P++++ + + + +EA +L N+ L YS
Sbjct: 1048 DSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSS 1107
Query: 426 VICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLL 463
VI + K +E L+ M + G D ++ C +
Sbjct: 1108 VIDAYLRSKDYNSGIERLL-EMKKEGLEPDHRIWTCFV 1144
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 144/306 (47%), Gaps = 7/306 (2%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
++AF G+I + KA+G P ++ +L + RV A+ + ++ +EA
Sbjct: 864 LDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEM-EEAN 922
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAM 229
+ ++ + +M++ + + + +V+ ++ EP+ TYNT+I C+ +
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGY 982
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
+ + + P + T+ +LI + K+ +++A +E+ +G + + Y+ +++
Sbjct: 983 LLMQQM-RNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKI 1041
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
SG+ +A++++ M+ GI+ +AT ++ + G +EA K + + ++L
Sbjct: 1042 SRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELT 1101
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
YS +++ Y + + + L EM + ++P + R ++ E +LLLK
Sbjct: 1102 TLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLK 1161
Query: 410 NMPRMG 415
+ +G
Sbjct: 1162 ALEDIG 1167
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 157/412 (38%), Gaps = 48/412 (11%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P L+ + +L VL+R N A +Y ++ + P Y MI G K + +K
Sbjct: 506 PDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHT-PSYTLYELMILGLMKENRSDDIQK 564
Query: 199 VFDEMR--CEPNAITYNTMIHGLCKKGE-MDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+M C N + I + KGE D A R + A + + T +++ Y
Sbjct: 565 TIRDMEELCGMNPLE----ISSVLVKGECFDLAARQL-KVAITNGYELENDTLLSILGSY 619
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLC----LSGNVD-------------- 297
S G EA ++ ++E + ALI C LS +D
Sbjct: 620 SSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFG 679
Query: 298 -------------------EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHM 338
EA ++ S +RL G + + + SM+ +C +G E A + +
Sbjct: 680 SSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVV 739
Query: 339 KEMVSRGMDLDVKA-YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVA 397
+ ++G Y+ I+ Y K +A S++ + P + ++N++
Sbjct: 740 NQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQ 799
Query: 398 ERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDAT 457
E A + M R G SP S +I++ LC V GR++ + +V + G + +
Sbjct: 800 CGCYERARAIFNTMMRDGPSPTVESINILLHALC-VDGRLEELYVVVEELQDMGFKISKS 858
Query: 458 MYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+L + G+ K M +L Y ++ LC +V++
Sbjct: 859 SILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRD 910
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/234 (18%), Positives = 100/234 (42%), Gaps = 7/234 (2%)
Query: 123 DIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTY 180
D + + + + K +G P + N ++ + R R + Q+ L +P + TY
Sbjct: 942 DYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL-DPKLDTY 1000
Query: 181 TTMIRGFCKMGMVESARKVFDEMRCEPNAIT---YNTMIHGLCKKGEMDGAMRVFNRFAE 237
++I F K +E A ++F+E+ + + Y+TM+ + + D + +
Sbjct: 1001 KSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMK-ISRDSGSDSKAEKLLQMMK 1059
Query: 238 SKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVD 297
+ P + T L+ YS G QEA + +++ + + Y+++I+ S + +
Sbjct: 1060 NAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYN 1119
Query: 298 EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
+ +M+ +G++ + T ++ E + +K + G DL ++
Sbjct: 1120 SGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGFDLPIR 1173
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 133/247 (53%), Gaps = 4/247 (1%)
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMD 226
++ ++ DV T ++ CK G +A+ +F EM + PN +TYN MI C G
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
A ++ E K PD+VTF+ LI+ + K +V EA KEM P +TYN++
Sbjct: 63 DADQLLRHMIE-KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSM 121
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
I+G C VD+AKRM+ M KG +V T ++++ G+C R + ++ EM RG+
Sbjct: 122 IDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 181
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
+ Y+ +++ +C++G A +L EM++ + P +F+ + L ++++L +A
Sbjct: 182 VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFA 241
Query: 407 LLKNMPR 413
+L+++ +
Sbjct: 242 ILEDLQK 248
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 129/241 (53%), Gaps = 1/241 (0%)
Query: 271 MQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGR 330
M + + +VV A+++ LC GN A+ + ++M KGI NV T M+ FC GR
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 331 SEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNA 390
+A + ++ M+ + ++ D+ +S ++N + K K SEA I +EM+ + P+ ++N+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 391 VFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS 450
+ + ++++A +L +M GCSP+ +++S +I G CK K R+ E+ M +
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAK-RVDNGMEIFCEMHRR 179
Query: 451 GHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEE 510
G + Y L+ G+C+ GD + A + +MI + T+ + LC+K ++++
Sbjct: 180 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
Query: 511 Y 511
+
Sbjct: 240 F 240
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 120/241 (49%), Gaps = 1/241 (0%)
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKR 301
+ DVV T ++D K G A N EM E+G PNV+TYN +I+ C SG +A +
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 302 MMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYC 361
++ M K I ++ T ++++ F + EA + KEM+ + Y+ +++ +C
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 362 KIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFL 421
K + +A +L M +K P V +F+ + ++++ + + M R G N +
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 422 SYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYD 481
+Y+ +I G C+V G + ++L++ M+ G D ++C+L G C + A + D
Sbjct: 187 TYTTLIHGFCQV-GDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 482 M 482
+
Sbjct: 246 L 246
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 1/229 (0%)
Query: 206 EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL 265
+ + + ++ LCK G A +F E K P+V+T+ +ID + G +A
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHE-KGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 266 NCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGF 325
++ M E+ P++VT++ALI V EA+ + +M I T SM+ GF
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 326 CMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSV 385
C R ++A + + M S+G DV +S ++N YCK + + I EM + + +
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 386 SSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
++ + L+ A LL M G +P+++++ ++ GLC K
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 234
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 134 AKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMV 193
+K P ++ + ++ +A RV+ I+ ++ + +V V TYTT+I GFC++G +
Sbjct: 143 SKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV-TYTTLIHGFCQVGDL 201
Query: 194 ESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKS 240
++A+ + +EM P+ IT++ M+ GLC K E+ A + +S+
Sbjct: 202 DAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSED 251
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 208/455 (45%), Gaps = 21/455 (4%)
Query: 3 VAVRKATVKPSSIVTTITSLLQTPDSEPLKKFSCYLTPSLVTQVIKNTHNPH-HALFFFN 61
V+ A+ I +T + L + S L+P+L+ +V+K N AL F
Sbjct: 57 VSANDASQDAERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFK 116
Query: 62 WASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSL---LRRSNKLSDFLASKFINAF 118
WA N + + H S Y A+ + L F SL ++ LS + +
Sbjct: 117 WAENQK----GFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRY 172
Query: 119 GDRGDIRGAIHWFHKAKASGPCALSC--NAVLGVLVRANRVNLAKAIYDQVVKEALVEPD 176
++ AI FHK + G S N +L L ++ V A+ ++D++ K+ EPD
Sbjct: 173 ARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRF-EPD 231
Query: 177 VFTYTTMIRGFCK----MGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVF 232
+ +YT ++ G+ + + + E R++ DE EP+ + Y +I+ CK + + A+R F
Sbjct: 232 IKSYTILLEGWGQELNLLRVDEVNREMKDE-GFEPDVVAYGIIINAHCKAKKYEEAIRFF 290
Query: 233 NRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCL 292
N E ++C+P F +LI+G ++ +AL + + G TYNAL+ C
Sbjct: 291 NEM-EQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCW 349
Query: 293 SGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKA 352
S +++A + + +MRLKG+ N T +L + RS+EA + + M + V
Sbjct: 350 SQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVST 406
Query: 353 YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
Y ++V +C + A+ I EM K + P + F+++ L E KL+EA M
Sbjct: 407 YEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEML 466
Query: 413 RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM 447
+G P +S + L +GR V +LV M
Sbjct: 467 DVGIRPPGHMFSRLKQTLLD-EGRKDKVTDLVVKM 500
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 179/396 (45%), Gaps = 12/396 (3%)
Query: 94 STADSLLRRSN-KLSDFLASKFINAFGDRGDIRGAI-HWFHKAKASGPCALSCNAVLGVL 151
S ++LL ++ KLS L + + + G + ++ W K + NA++ L
Sbjct: 79 SKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESL 138
Query: 152 VRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPN 208
+ + L ++ D + + L+ + F + R + + V+ A F +M +
Sbjct: 139 GKIKQFKLIWSLVDDMKAKKLLSKETFALIS--RRYARARKVKEAIGAFHKMEEFGFKME 196
Query: 209 AITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM 268
+ +N M+ L K + A +VF++ + K PD+ ++T L++G+ + +
Sbjct: 197 SSDFNRMLDTLSKSRNVGDAQKVFDKM-KKKRFEPDIKSYTILLEGWGQELNLLRVDEVN 255
Query: 269 KEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMV 328
+EM+++G +P+VV Y +I C + +EA R ++M + K + S++ G
Sbjct: 256 REMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSE 315
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSF 388
+ +A++ + S G L+ Y+ +V YC + +A + EM K + P+ ++
Sbjct: 316 KKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTY 375
Query: 389 NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
+ + L+ ++ +EA + + M C P +Y I++ C K R+ + ++ M
Sbjct: 376 DIILHHLIRMQRSKEAYEVYQT---MSCEPTVSTYEIMVRMFCN-KERLDMAIKIWDEMK 431
Query: 449 QSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMID 484
G M++ L+ C + + A + +M+D
Sbjct: 432 GKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLD 467
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 130/303 (42%), Gaps = 44/303 (14%)
Query: 212 YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM 271
YN +I L K + + + K + TF + Y++ +V+EA+ +M
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE--TFALISRRYARARKVKEAIGAFHKM 188
Query: 272 QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM---V 328
+E G + +N +++ L S NV +A+++ KM+ K + ++ + T +L+G+ +
Sbjct: 189 EEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNL 248
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSF 388
R +E + MK+ G + DV AY +I+N +CK K EA+ EM + KPS F
Sbjct: 249 LRVDEVNREMKD---EGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIF 305
Query: 389 NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
++ L +E+KL +A+ E
Sbjct: 306 CSLINGLGSEKKLNDAL------------------------------------EFFERSK 329
Query: 449 QSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
SG L+A YN L+G YC E A KTV +M K N TY + L + K
Sbjct: 330 SSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSK 389
Query: 509 EEY 511
E Y
Sbjct: 390 EAY 392
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 216/493 (43%), Gaps = 19/493 (3%)
Query: 38 LTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTAD 97
+TPS+V +V+K ++ A FF+WA + Y H + Y A L + F AD
Sbjct: 123 VTPSIVAEVLKLGNDAAVAAKFFHWAGKQK----GYKHDFAAYNAFAYCLNRNGHFRAAD 178
Query: 98 SLLR----RSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVL 151
L + S+ I D + + K K G P N ++ L
Sbjct: 179 QLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDAL 238
Query: 152 VRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPN 208
V+ +LA A+Y+ ++ LVE T+ +++G CK G +E ++ MR C+P+
Sbjct: 239 VKNGYFDLALAVYEDFKEDGLVEEST-TFMILVKGLCKAGRIEEMLEILQRMRENLCKPD 297
Query: 209 AITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM 268
Y MI L +G +D ++RV++ + +PDV+ + TL+ G K G V+
Sbjct: 298 VFAYTAMIKTLVSEGNLDASLRVWDEMRRDE-IKPDVMAYGTLVVGLCKDGRVERGYELF 356
Query: 269 KEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMV 328
EM+ + + Y LIEG G V A + + G ++ +++KG C V
Sbjct: 357 MEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSV 416
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSF 388
+ ++A K + + ++ D + S I+ Y + + S+ ++L E + + P
Sbjct: 417 NQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVL-ERIGELGYPVSDYL 475
Query: 389 NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
F++L A+ + L + + + + Y+I++ L K+ G +Q L M
Sbjct: 476 TQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKM-GDIQKSLSLFYEMR 534
Query: 449 QSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
+ G D++ Y+ + + E GD + A +I+ S + + Y + K LC G++
Sbjct: 535 KLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEID 594
Query: 509 EEYL--KRCVDNT 519
L + C+ N
Sbjct: 595 AVMLLVRECLGNV 607
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 98/221 (44%), Gaps = 9/221 (4%)
Query: 106 LSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSC-NAVLGVLVRANRVNLAKAIY 164
+SD+L F D A+ F+ K G ++S N ++ L + + + +++
Sbjct: 471 VSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLF 530
Query: 165 DQVVKEALVEPDVFTYTTMIRGFCKMGMVESA---RKVFDEMRCEPNAITYNTMIHGLCK 221
++ K EPD +Y+ I F + G V++A + EM C P+ Y ++ GLC+
Sbjct: 531 YEMRKLGF-EPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQ 589
Query: 222 KGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVV 281
GE+D M + + P + + K ++ + + EM ++G N V
Sbjct: 590 IGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEV 649
Query: 282 TYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSML 322
Y A+I G+ G + A+ + ++++ K V T M+
Sbjct: 650 IYCAIISGMSKHGTIKVAREVFTELK----KRKVMTEADMV 686
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 113/270 (41%), Gaps = 11/270 (4%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASGPCA--LSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
I F G +R A + + SG A NAV+ L N+V+ A ++ ++E
Sbjct: 374 LIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEE 433
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAIT-YNTMIHGLCKKGEMDGAMR 230
L EPD T + ++ + M + V + + ++ Y T L E AM
Sbjct: 434 L-EPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMA 492
Query: 231 VFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGL 290
+ + V + L++ K G++Q++L+ EM++ G +P+ +Y+ I
Sbjct: 493 LDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCF 552
Query: 291 CLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV----SRGM 346
G+V A K+ ++A S+ KG C +G + + ++E + S M
Sbjct: 553 VEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPM 612
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREM 376
+ Y++ V CK + + ++ EM
Sbjct: 613 EF---KYALTVCHVCKGSNAEKVMKVVDEM 639
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 142/558 (25%), Positives = 220/558 (39%), Gaps = 124/558 (22%)
Query: 38 LTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTAD 97
L V V++N NP H+L F+ W SN P Y+ +S + + + L +
Sbjct: 74 LNTRFVISVLQNQDNPLHSLRFYLWVSNFDPV---YAKDQSLKSVLGNALFRKGPLLLSM 130
Query: 98 SLLRR----SNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVL 151
LL+ ++SD L I ++G G + F + G P NAV+ L
Sbjct: 131 ELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDAL 190
Query: 152 VRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAIT 211
V++N ++LA + Q+ + C+P+ T
Sbjct: 191 VKSNSLDLAYLKFQQMRSDG---------------------------------CKPDRFT 217
Query: 212 YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM 271
YN +IHG+CKKG +D A+R+ + E + RP+V T+T LIDG+ G V EAL ++ M
Sbjct: 218 YNILIHGVCKKGVVDEAIRLVKQM-EQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMM 276
Query: 272 QEQGCQPNVVTYNALIEGL---------------------------------CLSGN--V 296
+ + PN T + G+ CLS N
Sbjct: 277 RVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMA 336
Query: 297 DEAKRMMSKMRLKG-IKDNVATNTSM---LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKA 352
E + + K+ +G I D+ N +M LKG +V E + VSRG+
Sbjct: 337 KETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLV----ETCRIFDGFVSRGVKPGFNG 392
Query: 353 YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
Y V+V + SE L++M + SV S+NAV L R++E A + L M
Sbjct: 393 YLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ 452
Query: 413 RMGCSPN------FLS-----------------------------YSIVICGLCKVKGRM 437
G SPN FLS +S++I LC+ K +
Sbjct: 453 DRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAK-EI 511
Query: 438 QLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTF 497
+ + ML+ G + YN L+ C GD + ++K M + + Y
Sbjct: 512 KDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNAT 571
Query: 498 VKELCAKGKVK--EEYLK 513
++ C KVK EE LK
Sbjct: 572 IQSFCKMRKVKKAEELLK 589
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 147/312 (47%), Gaps = 19/312 (6%)
Query: 111 ASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKE 170
+F+ G+RG I P + + NA + L++ + + I+D V
Sbjct: 339 TGQFLRKIGERGYI--------------PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSR 384
Query: 171 ALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDG 227
V+P Y +++ + +M + + +YN +I LCK ++
Sbjct: 385 G-VKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIEN 443
Query: 228 AMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
A +F + + P++VTF T + GYS RG+V++ ++++ G +P+V+T++ +I
Sbjct: 444 AA-MFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLII 502
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMD 347
LC + + +A +M GI+ N T +++ C G ++ ++K +M G+
Sbjct: 503 NCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLS 562
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
D+ AY+ + +CK+ K +A +L+ M+ +KP +++ + + L + EA +
Sbjct: 563 PDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREM 622
Query: 408 LKNMPRMGCSPN 419
++ R GC P+
Sbjct: 623 FSSIERHGCVPD 634
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 134/269 (49%), Gaps = 2/269 (0%)
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALN 266
P++ T+N + L K ++ R+F+ F S+ +P + L+ E
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFDGFV-SRGVKPGFNGYLVLVQALLNAQRFSEGDR 411
Query: 267 CMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC 326
+K+M G +V +YNA+I+ LC + ++ A +++M+ +GI N+ T + L G+
Sbjct: 412 YLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYS 471
Query: 327 MVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVS 386
+ G ++ +++++ G DV +S+I+N C+ + +A +EM+ ++P+
Sbjct: 472 VRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEI 531
Query: 387 SFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSS 446
++N + R + + +V L M G SP+ +Y+ I CK++ +++ EEL+ +
Sbjct: 532 TYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMR-KVKKAEELLKT 590
Query: 447 MLQSGHNLDATMYNCLLGGYCEDGDEEMA 475
ML+ G D Y+ L+ E G E A
Sbjct: 591 MLRIGLKPDNFTYSTLIKALSESGRESEA 619
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 107/207 (51%), Gaps = 1/207 (0%)
Query: 245 VVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMS 304
V ++ +ID K ++ A + EMQ++G PN+VT+N + G + G+V + ++
Sbjct: 425 VYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLE 484
Query: 305 KMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIG 364
K+ + G K +V T + ++ C ++A KEM+ G++ + Y++++ C G
Sbjct: 485 KLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTG 544
Query: 365 KPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYS 424
+V + +M + P + ++NA + RK+++A LLK M R+G P+ +YS
Sbjct: 545 DTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYS 604
Query: 425 IVICGLCKVKGRMQLVEELVSSMLQSG 451
+I L + GR E+ SS+ + G
Sbjct: 605 TLIKALSE-SGRESEAREMFSSIERHG 630
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 168/390 (43%), Gaps = 48/390 (12%)
Query: 161 KAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIH 217
K IY V+ P + T+ ++ G CK G +E A + EMR PN ++YNT+I
Sbjct: 146 KMIYSGVI------PGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIK 199
Query: 218 GLCKKGEMDGAMRVFNR-------------------------------------FAESKS 240
GLC +D A+ +FN S++
Sbjct: 200 GLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQA 259
Query: 241 CRP-DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEA 299
P D+V T L+D K G V +AL KEM ++ + V YN +I GLC SGN+ A
Sbjct: 260 NAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAA 319
Query: 300 KRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNE 359
M M +G+ +V T +++ C G+ +EA M + G+ D +Y VI+
Sbjct: 320 YGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQG 379
Query: 360 YCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPN 419
C G + A L M+ + P V +N V A+ +L M G PN
Sbjct: 380 LCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPN 439
Query: 420 FLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTV 479
+ + +I G K GR+ + + M + + D T YN LLG C G +A +
Sbjct: 440 VYTNNALIHGYVK-GGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLY 498
Query: 480 YDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+M+ + + TY V+ LC KG++K+
Sbjct: 499 DEMLRRGCQPDIITYTELVRGLCWKGRLKK 528
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 164/341 (48%), Gaps = 10/341 (2%)
Query: 123 DIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRV-NLAKAIYDQVV--KEALVEPDV 177
++ A++ F+ G P ++CN ++ L + + N K + ++++ +A D+
Sbjct: 206 NVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDI 265
Query: 178 FTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNR 234
T ++ K G V A +V+ EM +++ YN +I GLC G M A
Sbjct: 266 VICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCD 325
Query: 235 FAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSG 294
+ + PDV T+ TLI K G+ EA + MQ G P+ ++Y +I+GLC+ G
Sbjct: 326 MVK-RGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHG 384
Query: 295 NVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYS 354
+V+ A + M + V ++ G+ G + A+ + M+S G+ +V +
Sbjct: 385 DVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNN 444
Query: 355 VIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRM 414
+++ Y K G+ +A + EM + ++ P +++N + L A L M R
Sbjct: 445 ALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRR 504
Query: 415 GCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLD 455
GC P+ ++Y+ ++ GLC KGR++ E L+S + +G +D
Sbjct: 505 GCQPDIITYTELVRGLC-WKGRLKKAESLLSRIQATGITID 544
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 146/311 (46%), Gaps = 41/311 (13%)
Query: 212 YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM 271
+++++ LC +G++D A+ + + S P ++T L++G K G +++A ++EM
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYS-GVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 272 QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC---MV 328
+E G PN V+YN LI+GLC NVD+A + + M GI+ N T ++ C ++
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242
Query: 329 GRSE------------------------------------EAIKHMKEMVSRGMDLDVKA 352
G + +A++ KEM + + D
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302
Query: 353 YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
Y+VI+ C G A + +MV + + P V ++N + L E K +EA L M
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362
Query: 413 RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDE 472
G +P+ +SY ++I GLC + G + E + SML+S + ++N ++ GY GD
Sbjct: 363 NGGVAPDQISYKVIIQGLC-IHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDT 421
Query: 473 EMALKTVYDMI 483
AL + M+
Sbjct: 422 SSALSVLNLML 432
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 37/245 (15%)
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGA- 228
V PDVFTY T+I CK G + A + M+ P+ I+Y +I GLC G+++ A
Sbjct: 331 VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRAN 390
Query: 229 ---------------------MRVFNRFAESKSC------------RPDVVTFTTLIDGY 255
+ + R+ ++ S +P+V T LI GY
Sbjct: 391 EFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGY 450
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G + +A EM+ P+ TYN L+ C G++ A ++ +M +G + ++
Sbjct: 451 VKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDI 510
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T T +++G C GR ++A + + + G+ +D + ++ +Y ++ +P EA + ++
Sbjct: 511 ITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKK 570
Query: 376 MVAKR 380
+A R
Sbjct: 571 WLATR 575
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 113/267 (42%), Gaps = 26/267 (9%)
Query: 261 VQEALNCMKEMQEQGCQPNVVTYN-------ALIEGLCLSGNVDEAKRMMSKMRLKGIKD 313
++ +L+ + ++E CQ Y+ +++ LCL G +D A + KM G+
Sbjct: 95 LKSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIP 154
Query: 314 NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL 373
+ T+ +L G C G E+A ++EM G + +Y+ ++ C + +A+ +
Sbjct: 155 GLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLF 214
Query: 374 REMVAKRMKPSVSSFNAVFRVLVAE-------RKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
M ++P+ + N + L + +KL E +L S IV
Sbjct: 215 NTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEIL--------DSSQANAPLDIV 266
Query: 427 ICGL----CKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDM 482
IC + C G + E+ M Q D+ +YN ++ G C G+ A + DM
Sbjct: 267 ICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDM 326
Query: 483 IDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ + + TY T + LC +GK E
Sbjct: 327 VKRGVNPDVFTYNTLISALCKEGKFDE 353
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 186/390 (47%), Gaps = 10/390 (2%)
Query: 53 PHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLAS 112
PH A F + P+ S+ + AA+T S+ S + + KL +
Sbjct: 61 PHEAQTVFKTLAETGHRPSLISYT-TLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFN 119
Query: 113 KFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKE 170
INAF + G++ A+ K K G P + N ++ A + + + D +++E
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 171 ALVE--PDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGE- 224
V+ P++ T+ +++ +CK VE A +V +M P+ +TYNT+ +KGE
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 225 MDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
+ V + + +P+ T ++ GY + G V++ L ++ M+E + N+V +N
Sbjct: 240 VRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFN 299
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
+LI G + D +++ M+ +K +V T ++++ + G E+A + KEMV
Sbjct: 300 SLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKA 359
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA 404
G+ D AYS++ Y + +P +A +L ++ + +P+V F V + +++A
Sbjct: 360 GVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDA 418
Query: 405 VLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
+ + M + G SPN ++ ++ G +VK
Sbjct: 419 MRVFNKMCKFGVSPNIKTFETLMWGYLEVK 448
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 181/396 (45%), Gaps = 12/396 (3%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
+K +N +RG A F +G P +S +L + + +I +V +
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV-E 107
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVF---DEMRCEPNAITYNTMIHGLCKKGEMD 226
++ + D + +I F + G +E A + E+ P TYNT+I G G+ +
Sbjct: 108 QSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPE 167
Query: 227 GAMRVFNRFAESKSCR--PDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
+ + + E + P++ TF L+ + K+ +V+EA +K+M+E G +P+ VTYN
Sbjct: 168 RSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227
Query: 285 ALIEGLCLSGNVDEAK-RMMSKMRLK-GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
+ G A+ ++ KM +K K N T ++ G+C GR + ++ ++ M
Sbjct: 228 TIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMK 287
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLE 402
++ ++ ++ ++N + ++ +L M +K V +++ V + +E
Sbjct: 288 EMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYME 347
Query: 403 EAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCL 462
+A + K M + G P+ +YSI+ G + K + E L + +++S N+ ++ +
Sbjct: 348 KAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNV--VIFTTV 405
Query: 463 LGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
+ G+C +G + A++ M N T+ T +
Sbjct: 406 ISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 441
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 125/263 (47%), Gaps = 11/263 (4%)
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
G R E SCR V + T L++ +RG EA K + E G +P++++Y L
Sbjct: 28 GQYRFCKSCVEGSSCR-TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTL 86
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
+ + + ++S++ G K + +++ F G E+A++ + +M G+
Sbjct: 87 LAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGL 146
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK---RMKPSVSSFNAVFRVLVAERKLEE 403
+ Y+ ++ Y GKP + +L M+ + + P++ +FN + + ++K+EE
Sbjct: 147 NPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEE 206
Query: 404 AVLLLKNMPRMGCSPNFLSY-SIVICGLCK---VKGRMQLVEELVSSMLQSGHNLDATMY 459
A ++K M G P+ ++Y +I C + K V+ ++VE++V ++ +
Sbjct: 207 AWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV---MKEKAKPNGRTC 263
Query: 460 NCLLGGYCEDGDEEMALKTVYDM 482
++GGYC +G L+ V M
Sbjct: 264 GIVVGGYCREGRVRDGLRFVRRM 286
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 13/227 (5%)
Query: 167 VVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKG 223
++KE V+ DV TY+T++ + G +E A +VF EM +P+A Y+ + G +
Sbjct: 320 LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAK 379
Query: 224 EMDGAMRVFNRF-AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVT 282
E A + ES RP+VV FTT+I G+ G + +A+ +M + G PN+ T
Sbjct: 380 EPKKAEELLETLIVES---RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKT 436
Query: 283 YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
+ L+ G +A+ ++ MR G+K +T + + + + G ++E+ K + +
Sbjct: 437 FETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 496
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFN 389
+ D+++ + Y K S + ++L+ V KR P+ + N
Sbjct: 497 CK--DIEIAKLEKL---YQKQSSGS-SFNLLQIPVGKRELPTAKAMN 537
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 384 SVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEEL 443
+V S + VL+ + EA + K + G P+ +SY+ ++ + V+ + + +
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMT-VQKQYGSISSI 102
Query: 444 VSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCA 503
VS + QSG LD+ +N ++ + E G+ E A++ + M + TY T +K
Sbjct: 103 VSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGI 162
Query: 504 KGK 506
GK
Sbjct: 163 AGK 165
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 174/374 (46%), Gaps = 13/374 (3%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ N ++ R ++ A A+ ++ +EA +EPDV TY ++I G K M+ +
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRM-REAGIEPDVTTYNSLISGAAKNLMLNRVLQ 104
Query: 199 VFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+FDEM P+ +YNT++ K G A ++ + P + T+ L+D
Sbjct: 105 LFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDAL 164
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K G A+ K ++ + +P ++TYN LI GLC S V MM +++ G N
Sbjct: 165 CKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNA 223
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T T+MLK + R E+ ++ +M G D A +V+ K G+ EA + E
Sbjct: 224 VTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHE 283
Query: 376 MVAKRMKPS-VSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
+V + + S+N + + + L+ LL+ + G P+ +++I++ GL +
Sbjct: 284 LVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNI- 342
Query: 435 GRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDM-IDKSFLFNKDT 493
G E+ ++ + + G NCL+ G C+ G + A++ M + F T
Sbjct: 343 GNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDEF-----T 397
Query: 494 YCTFVKELCAKGKV 507
Y + V LC G++
Sbjct: 398 YTSVVHNLCKDGRL 411
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 147/307 (47%), Gaps = 12/307 (3%)
Query: 184 IRGFCKMGMVESARKVF-DEMRCE--PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKS 240
+ CK +E A + D +R P+ ITYNT+I G + +D A V R E+
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREA-G 78
Query: 241 CRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAK 300
PDV T+ +LI G +K + L EM G P++ +YN L+ G EA
Sbjct: 79 IEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAF 138
Query: 301 RMMSK-MRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNE 359
+++ + + L G+ + T +L C G ++ AI+ K + SR + ++ Y++++N
Sbjct: 139 KILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILING 197
Query: 360 YCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPN 419
CK + ++RE+ P+ ++ + ++ +++E+ + L M + G + +
Sbjct: 198 LCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFD 257
Query: 420 FLSYSIVICGLCKVKGRMQLVEELVSSMLQSG-HNLDATMYNCLLGGYCEDGDEEMALKT 478
+ V+ L K GR + E + +++SG + D YN LL Y +DG+ L
Sbjct: 258 GFANCAVVSALIKT-GRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGN----LDA 312
Query: 479 VYDMIDK 485
V D++++
Sbjct: 313 VDDLLEE 319
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 119/238 (50%), Gaps = 3/238 (1%)
Query: 275 GCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEA 334
G P+V+TYN LI+G +DEA + +MR GI+ +V T S++ G
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 335 IKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMV-AKRMKPSVSSFNAVFR 393
++ EM+ G+ D+ +Y+ +++ Y K+G+ EA IL E + + P + ++N +
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLD 162
Query: 394 VLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHN 453
L + A+ L K++ + P ++Y+I+I GLCK + R+ V+ ++ + +SG+
Sbjct: 163 ALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSR-RVGSVDWMMRELKKSGYT 220
Query: 454 LDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
+A Y +L Y + E L+ M + + F+ C V L G+ +E Y
Sbjct: 221 PNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAY 278
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 130/283 (45%), Gaps = 9/283 (3%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKAS-GPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
++A G AI F K+ P ++ N ++ L ++ RV + ++ K
Sbjct: 160 LLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGY 219
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEP---NAITYNTMIHGLCKKGEMDGAM 229
P+ TYTTM++ + K +E ++F +M+ E + ++ L K G + A
Sbjct: 220 T-PNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAY 278
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
+ S + D+V++ TL++ Y K G + + ++E++ +G +P+ T+ ++ G
Sbjct: 279 ECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNG 338
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
L GN A++ ++ + G++ +V T ++ G C G + A++ M R D
Sbjct: 339 LLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----D 394
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVF 392
Y+ +V+ CK G+ A +L K MK S+ AV
Sbjct: 395 EFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVL 437
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 10/207 (4%)
Query: 124 IRGAIHWFHKAKASGPC--ALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYT 181
I + F K K G + AV+ L++ R A ++V+ D+ +Y
Sbjct: 239 IEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYN 298
Query: 182 TMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAES 238
T++ + K G +++ + +E+ +P+ T+ +++GL G GA + E
Sbjct: 299 TLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGE- 357
Query: 239 KSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDE 298
+P VVT LIDG K G V A+ M+ + + TY +++ LC G +
Sbjct: 358 MGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDGRLVC 413
Query: 299 AKRMMSKMRLKGIKDNVATNTSMLKGF 325
A +++ KG+K + ++L G
Sbjct: 414 ASKLLLSCYNKGMKIPSSARRAVLSGI 440
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 2/159 (1%)
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
+ K ++ VN CK A ++L + + + P V ++N + + ++EA +
Sbjct: 11 ISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAV 70
Query: 408 LKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
+ M G P+ +Y+ +I G K + V +L ML SG + D YN L+ Y
Sbjct: 71 TRRMREAGIEPDVTTYNSLISGAAK-NLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYF 129
Query: 468 EDGDEEMALKTVYDMIDKSFLF-NKDTYCTFVKELCAKG 505
+ G A K +++ I + L DTY + LC G
Sbjct: 130 KLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSG 168
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 184/386 (47%), Gaps = 52/386 (13%)
Query: 39 TPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSC-------------YAAITD 85
+P+ V ++I + +P A F++AS QPN + H RS + I D
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQ-QPN---FRHSRSSHLILILKLGRGRYFNLIDD 105
Query: 86 VLLSH----------------SLFSTA---DSLLRRSNKLSDF---LASKFINAFGD--- 120
VL H +++ A + +L K+ +F K +N D
Sbjct: 106 VLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV 165
Query: 121 --RGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPD 176
RG ++ A F ++ G P S N ++ + +++A ++ ++++ +V PD
Sbjct: 166 SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV-PD 224
Query: 177 VFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFN 233
V +Y +I+GFC+ G V A ++ D+M + P+ ++Y T+++ LC+K ++ A ++
Sbjct: 225 VDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLC 284
Query: 234 RFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
R + K C PD+V + T+I G+ + +A + +M GC PN V+Y LI GLC
Sbjct: 285 RM-KLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQ 343
Query: 294 GNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAY 353
G DE K+ + +M KG + + + ++KGFC G+ EEA ++ ++ G L +
Sbjct: 344 GMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTW 403
Query: 354 SVIVNEYCKIGKPSEAVSILREMVAK 379
+++ C + SE + + E K
Sbjct: 404 EMVIPLICNEDE-SEKIKLFLEDAVK 428
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 124/247 (50%), Gaps = 1/247 (0%)
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
S RG +Q+A K + G PN +YN L++ CL+ ++ A ++ KM + + +V
Sbjct: 166 SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV 225
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
+ +++GFC G+ A++ + +M+++G D +Y+ ++N C+ + EA +L
Sbjct: 226 DSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCR 285
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
M K P + +N + E + +A +L +M GCSPN +SY +I GLC +G
Sbjct: 286 MKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCD-QG 344
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYC 495
++ + M+ G + ++ NCL+ G+C G E A V ++ + DT+
Sbjct: 345 MFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWE 404
Query: 496 TFVKELC 502
+ +C
Sbjct: 405 MVIPLIC 411
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 248 FTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS-GNVDEAKRMMSKM 306
FT LI Y++ ++ L+ +M E P N +++ L G + +A +
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP 366
RL G+ N + +++ FC+ A + +M+ R + DV +Y +++ +C+ G+
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 367 SEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
+ A+ +L +M+ K P S+ + L + +L EA LL M GC+P+ + Y+ +
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 427 ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKS 486
I G C+ + R +++ ML +G + ++ Y L+GG C+ G + K + +MI K
Sbjct: 302 ILGFCR-EDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG 360
Query: 487 FLFNKDTYCTFVKELCAKGKVKE 509
F + VK C+ GKV+E
Sbjct: 361 FSPHFSVSNCLVKGFCSFGKVEE 383
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERK-L 401
S G L + ++ ++ Y + P + +S +M+ P N + VLV+ R L
Sbjct: 112 SSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYL 171
Query: 402 EEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNC 461
++A L K+ G PN SY++++ C + + + +L ML+ D Y
Sbjct: 172 QKAFELFKSSRLHGVMPNTRSYNLLMQAFC-LNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 462 LLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLKRC 515
L+ G+C G A++ + DM++K F+ ++ +Y T + LC K +++E Y C
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLC 284
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 190/428 (44%), Gaps = 47/428 (10%)
Query: 39 TPSLVTQVIKN--THNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTA 96
TP+LV V+K H P AL FF++ N Y H S + D+ L T
Sbjct: 55 TPNLVNSVLKRLWNHGPK-ALQFFHFLDNHH---REYVHDASSFDLAIDIAARLHLHPTV 110
Query: 97 DSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANR 156
SL+ R L GP + V A +
Sbjct: 111 WSLIHRMRSLR-----------------------------IGPSPKTFAIVAERYASAGK 141
Query: 157 VNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE--PNAITYNT 214
+ A ++ + + + D+ ++ T++ CK VE A ++F +R + +TYN
Sbjct: 142 PDKAVKLFLNMHEHGCFQ-DLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNV 200
Query: 215 MIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQ 274
+++G C A+ V E + P++ T+ T++ G+ + G+++ A EM+++
Sbjct: 201 ILNGWCLIKRTPKALEVLKEMVE-RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKR 259
Query: 275 GCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEA 334
C+ +VVTY ++ G ++G + A+ + +M +G+ +VAT +M++ C E A
Sbjct: 260 DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENA 319
Query: 335 IKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRV 394
+ +EMV RG + +V Y+V++ G+ S +++ M + +P+ ++N + R
Sbjct: 320 VVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRY 379
Query: 395 LVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGL--------CKVKGRMQLVEELVSS 446
++E+A+ L + M C PN +Y+I+I G+ V G +E++
Sbjct: 380 YSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEILRL 439
Query: 447 MLQSGHNL 454
+SG L
Sbjct: 440 QSKSGSRL 447
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 152/307 (49%), Gaps = 3/307 (0%)
Query: 203 MRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQ 262
+R P+ T+ + G+ D A+++F E C D+ +F T++D K V+
Sbjct: 120 LRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHE-HGCFQDLASFNTILDVLCKSKRVE 178
Query: 263 EALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSML 322
+A + ++ + + VTYN ++ G CL +A ++ +M +GI N+ T +ML
Sbjct: 179 KAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTML 237
Query: 323 KGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMK 382
KGF G+ A + EM R ++DV Y+ +V+ + G+ A ++ EM+ + +
Sbjct: 238 KGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVL 297
Query: 383 PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEE 442
PSV+++NA+ +VL + +E AV++ + M R G PN +Y+++I GL G EE
Sbjct: 298 PSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA-GEFSRGEE 356
Query: 443 LVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELC 502
L+ M G + YN ++ Y E + E AL M L N DTY + +
Sbjct: 357 LMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF 416
Query: 503 AKGKVKE 509
+ + ++
Sbjct: 417 VRKRSED 423
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 159/332 (47%), Gaps = 15/332 (4%)
Query: 154 ANRVNLAKAIYDQV--VKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPN 208
A R++L ++ + ++ + P T+ + + G + A K+F M C +
Sbjct: 101 AARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQD 160
Query: 209 AITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM 268
++NT++ LCK ++ A +F S D VT+ +++G+ +AL +
Sbjct: 161 LASFNTILDVLCKSKRVEKAYELFRALRGRFSV--DTVTYNVILNGWCLIKRTPKALEVL 218
Query: 269 KEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMV 328
KEM E+G PN+ TYN +++G +G + A +M+ + + +V T T+++ GF +
Sbjct: 219 KEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVA 278
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSF 388
G + A EM+ G+ V Y+ ++ CK AV + EMV + +P+V+++
Sbjct: 279 GEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY 338
Query: 389 NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI---CGLCKVKGRMQLVEELVS 445
N + R L + L++ M GC PNF +Y+++I +V+ + L E++ S
Sbjct: 339 NVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
Query: 446 SMLQSGHNLDATMYNCLLGG-YCEDGDEEMAL 476
NLD YN L+ G + E+M +
Sbjct: 399 G--DCLPNLDT--YNILISGMFVRKRSEDMVV 426
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 119/274 (43%), Gaps = 39/274 (14%)
Query: 243 PDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRM 302
P TF + + Y+ G+ +A+ M E GC ++ ++N +++ LC S V++A +
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 303 MSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCK 362
+R GR +D Y+VI+N +C
Sbjct: 184 FRALR---------------------GR---------------FSVDTVTYNVILNGWCL 207
Query: 363 IGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLS 422
I + +A+ +L+EMV + + P+++++N + + ++ A M + C + ++
Sbjct: 208 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 423 YSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDM 482
Y+ V+ G V G ++ + M++ G YN ++ C+ + E A+ +M
Sbjct: 268 YTTVVHGF-GVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEM 326
Query: 483 IDKSFLFNKDTYCTFVKELCAKGKVK--EEYLKR 514
+ + + N TY ++ L G+ EE ++R
Sbjct: 327 VRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 360
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 113/277 (40%), Gaps = 43/277 (15%)
Query: 244 DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMM 303
D +F ID ++ + + M+ P+ T+ + E +G D+A ++
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 304 SKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKI 363
M G ++A+ ++L C R E+A + + + R +D Y+VI+N +C I
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLI 208
Query: 364 GKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSY 423
+ +A+ +L+EMV + G +PN +Y
Sbjct: 209 KRTPKALEVLKEMVER-----------------------------------GINPNLTTY 233
Query: 424 SIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMI 483
+ ++ G + G+++ E M + +D Y ++ G+ G+ + A +MI
Sbjct: 234 NTMLKGFFRA-GQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 292
Query: 484 DKSFLFNKDTYCTFVKELCAKGKVK------EEYLKR 514
+ L + TY ++ LC K V+ EE ++R
Sbjct: 293 REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 329
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
Query: 337 HMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLV 396
H +E V D ++ + ++ ++ S++ M + R+ PS +F V
Sbjct: 83 HHREYVH-----DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYA 137
Query: 397 AERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDA 456
+ K ++AV L NM GC + S++ ++ LCK K R++ EL + L+ ++D
Sbjct: 138 SAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSK-RVEKAYELFRA-LRGRFSVDT 195
Query: 457 TMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
YN +L G+C AL+ + +M+++ N TY T +K G+++ +
Sbjct: 196 VTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAW 250
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 182/390 (46%), Gaps = 45/390 (11%)
Query: 154 ANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE--PNAIT 211
AN V A + D++ K L EPD + + ++ CK G V+ A KVF++MR + PN
Sbjct: 180 ANMVKKAVEVLDEMPKYGL-EPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRY 238
Query: 212 YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM 271
+ ++++G C++G++ A V + E+ PD+V FT L+ GY+ G++ +A + M +M
Sbjct: 239 FTSLLYGWCREGKLMEAKEVLVQMKEA-GLEPDIVVFTNLLSGYAHAGKMADAYDLMNDM 297
Query: 272 QEQGCQPNV------------------------------------VTYNALIEGLCLSGN 295
+++G +PNV VTY ALI G C G
Sbjct: 298 RKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGM 357
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSV 355
+D+ ++ MR KG+ + T ++ + EE ++ +++M RG D+ Y+V
Sbjct: 358 IDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNV 417
Query: 356 IVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMG 415
++ CK+G+ EAV + EM A + P V +F + ++ L EA K M G
Sbjct: 418 VIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRG 477
Query: 416 C--SPNFLSYSIVICGLCKVKGRMQLVEELVS--SMLQSGHNLDATMYNCLLGGYCEDGD 471
+P + + ++ L + ++++ +++ S S S L+ + + + G
Sbjct: 478 IFSAPQYGTLKSLLNNLVR-DDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGH 536
Query: 472 EEMALKTVYDMIDKSFLFNKDTYCTFVKEL 501
+ A DM++ + +TY +K L
Sbjct: 537 VKEACSYCLDMMEMDLMPQPNTYAKLMKGL 566
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 167/365 (45%), Gaps = 40/365 (10%)
Query: 144 CNAVLGVLVRANRVNLAKAIYDQVVKE--ALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
C +++ +L + + + +++ K L+EP++F ++R F MV+ A +V D
Sbjct: 134 CKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFV--VLMRRFASANMVKKAVEVLD 191
Query: 202 EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
EM P +GL PD F L+D K G V
Sbjct: 192 EM---PK--------YGL----------------------EPDEYVFGCLLDALCKNGSV 218
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
+EA ++M+E+ PN+ + +L+ G C G + EAK ++ +M+ G++ ++ T++
Sbjct: 219 KEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNL 277
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP-SEAVSILREMVAKR 380
L G+ G+ +A M +M RG + +V Y+V++ C+ K EA+ + EM
Sbjct: 278 LSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYG 337
Query: 381 MKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLV 440
+ + ++ A+ +++ +L +M + G P+ ++Y ++ K K + +
Sbjct: 338 CEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEK-KEQFEEC 396
Query: 441 EELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKE 500
EL+ M + G + D +YN ++ C+ G+ + A++ +M DT+ +
Sbjct: 397 LELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMING 456
Query: 501 LCAKG 505
++G
Sbjct: 457 FTSQG 461
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 79/170 (46%), Gaps = 2/170 (1%)
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
++ + + V++ + +AV +L EM ++P F + L ++EA +
Sbjct: 165 IEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKV 224
Query: 408 LKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
++M R PN ++ ++ G C+ +G++ +E++ M ++G D ++ LL GY
Sbjct: 225 FEDM-REKFPPNLRYFTSLLYGWCR-EGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYA 282
Query: 468 EDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLKRCVD 517
G A + DM + F N + Y ++ LC K +E ++ V+
Sbjct: 283 HAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVE 332
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 181/372 (48%), Gaps = 23/372 (6%)
Query: 110 LASKFINAFGDRGDIRGAIHWFHKAKASGPC--ALSCNAVLGVLVRANRVNLAKAIYDQV 167
L + +N GD G++ G + AK C +++ +L + + + +++
Sbjct: 115 LIERVLNRCGDAGNL-GYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEM 173
Query: 168 VKE--ALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKK 222
KE L+EP++F +++ F MV+ A +V DEM EP+ + ++ LCK
Sbjct: 174 RKENPQLIEPELFV--VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKH 231
Query: 223 GEMDGAMRVFN----RFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQP 278
G + A ++F RF ++ FT+L+ G+ + G++ EA + +M E G +P
Sbjct: 232 GSVKDAAKLFEDMRMRFP------VNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEP 285
Query: 279 NVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHM 338
++V Y L+ G +G + +A ++ MR +G + N T +++ C V R EEA+K
Sbjct: 286 DIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVF 345
Query: 339 KEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAE 398
EM + DV Y+ +V+ +CK GK + +L +M+ K + PS ++ + +
Sbjct: 346 VEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKK 405
Query: 399 RKLEEAVLLLKNMPRMGCSPNFLSYSIVI---CGLCKVKGRMQLVEELVSSMLQSGHNLD 455
EE + L++ M ++ P+ Y++VI C L +VK ++L E+ + L G +
Sbjct: 406 ESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTF 465
Query: 456 ATMYNCLLGGYC 467
M N L C
Sbjct: 466 VIMINGLASQGC 477
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 116/507 (22%), Positives = 221/507 (43%), Gaps = 80/507 (15%)
Query: 38 LTPSLVTQVIKNTHNPHHALF-FFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTA 96
L P L+ +V+ + + + FF WA+ QP Y H Y ++ +L
Sbjct: 111 LRPGLIERVLNRCGDAGNLGYRFFVWAAK-QPR---YCHSIEVYKSMVKIL--------- 157
Query: 97 DSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVR--- 153
+K+ F G + G I + + P + + ++ R
Sbjct: 158 -------SKMRQF------------GAVWGLIE---EMRKENPQLIEPELFVVLVQRFAS 195
Query: 154 ANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE--PNAIT 211
A+ V A + D++ K EPD + + ++ CK G V+ A K+F++MR N
Sbjct: 196 ADMVKKAIEVLDEMPKFGF-EPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRY 254
Query: 212 YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM 271
+ ++++G C+ G+M A V + E+ PD+V +T L+ GY+ G++ +A + +++M
Sbjct: 255 FTSLLYGWCRVGKMMEAKYVLVQMNEA-GFEPDIVDYTNLLSGYANAGKMADAYDLLRDM 313
Query: 272 QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRS 331
+ +G +PN Y LI+ LC ++EA ++ +M + +V T T+++ GFC G+
Sbjct: 314 RRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKI 373
Query: 332 EEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAV 391
++ + +M+ +G+ Y I+ + K E + ++ +M P + +N V
Sbjct: 374 DKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVV 433
Query: 392 FRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGL----CKVKGR---MQLVEELV 444
R+ +++EAV L M G SP ++ I+I GL C ++ ++V +
Sbjct: 434 IRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
Query: 445 SSMLQSGH--------------NLDATMYNCLLG-GYCE---------------DGDEEM 474
S+ Q G + +++C+ G CE G E+
Sbjct: 494 FSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKE 553
Query: 475 ALKTVYDMIDKSFLFNKDTYCTFVKEL 501
A +MI+ F+ DT+ +K L
Sbjct: 554 ACSYCIEMIEMDFMPQPDTFAKLMKGL 580
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 153/332 (46%), Gaps = 41/332 (12%)
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVT---FTTLIDGYSKRGEVQEALNC 267
Y +M+ L K + GA V+ E + P ++ F L+ ++ V++A+
Sbjct: 149 VYKSMVKILSKMRQF-GA--VWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEV 205
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM 327
+ EM + G +P+ + L++ LC G+V +A ++ MR++ N+ TS+L G+C
Sbjct: 206 LDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCR 264
Query: 328 VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSS 387
VG+ EA + +M G + D+ Y+ +++ Y GK ++A +LR+M + +P+ +
Sbjct: 265 VGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANC 324
Query: 388 FNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKV-------------- 433
+ + + L ++EEA+ + M R C + ++Y+ ++ G CK
Sbjct: 325 YTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMI 384
Query: 434 -KGRM-------------------QLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEE 473
KG M + EL+ M Q ++ D +YN ++ C+ G+ +
Sbjct: 385 KKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVK 444
Query: 474 MALKTVYDMIDKSFLFNKDTYCTFVKELCAKG 505
A++ +M + DT+ + L ++G
Sbjct: 445 EAVRLWNEMEENGLSPGVDTFVIMINGLASQG 476
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 2/162 (1%)
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
++ + + V+V + +A+ +L EM +P F + L +++A L
Sbjct: 181 IEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKL 240
Query: 408 LKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
++M RM N ++ ++ G C+V G+M + ++ M ++G D Y LL GY
Sbjct: 241 FEDM-RMRFPVNLRYFTSLLYGWCRV-GKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYA 298
Query: 468 EDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
G A + DM + F N + Y ++ LC +++E
Sbjct: 299 NAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEE 340
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 168/346 (48%), Gaps = 6/346 (1%)
Query: 128 IHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGF 187
+ W H+ P + N VL ++RA + ++A ++D++ + AL PD +TY+T+I F
Sbjct: 142 LDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALA-PDRYTYSTLITSF 200
Query: 188 CKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPD 244
K GM +SA +M R + + Y+ +I + + A+ +F+R S PD
Sbjct: 201 GKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRS-GITPD 259
Query: 245 VVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMS 304
+V + ++I+ Y K +EA +KEM E G PN V+Y+ L+ + EA + +
Sbjct: 260 LVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFA 319
Query: 305 KMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIG 364
+M+ ++ T M+ + + +EA + + ++ +V +Y+ I+ Y +
Sbjct: 320 EMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAE 379
Query: 365 KPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYS 424
EA+ + R M K ++ +V ++N + ++ + E+A L++ M G PN ++YS
Sbjct: 380 LFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYS 439
Query: 425 IVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDG 470
+I K G++ L + SG +D +Y ++ Y G
Sbjct: 440 TIISIWGKA-GKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVG 484
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 181/395 (45%), Gaps = 31/395 (7%)
Query: 88 LSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKA---KASGPCALSC 144
++H LF D + +R+ + S I +FG G A+ W K + SG L
Sbjct: 173 IAHGLF---DEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYS 229
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR 204
N ++ + R + A +I+ + +K + + PD+ Y +MI + K + AR + EM
Sbjct: 230 N-LIELSRRLCDYSKAISIFSR-LKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMN 287
Query: 205 ---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
PN ++Y+T++ + + A+ VF E +C D+ T +ID Y + V
Sbjct: 288 EAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEV-NCALDLTTCNIMIDVYGQLDMV 346
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
+EA +++ +PNVV+YN ++ + EA + M+ K I+ NV T +M
Sbjct: 347 KEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTM 406
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
+K + E+A ++EM SRG++ + YS I++ + K GK A ++ +++ + +
Sbjct: 407 IKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGV 466
Query: 382 -------KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
+ + ++ V + A+R L E + L N+PR I L K
Sbjct: 467 EIDQVLYQTMIVAYERVGLMGHAKRLLHE-LKLPDNIPR----------ETAITILAKA- 514
Query: 435 GRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
GR + + +SG D +++ C++ Y +
Sbjct: 515 GRTEEATWVFRQAFESGEVKDISVFGCMINLYSRN 549
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 154/369 (41%), Gaps = 40/369 (10%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
LS ++ +L R N + A+ D V +EA P VF Y ++R + + A +FD
Sbjct: 120 LSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFD 179
Query: 202 EMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
EMR P+ TY+T+I K+G D A+ + E D+V ++ LI+ +
Sbjct: 180 EMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKM-EQDRVSGDLVLYSNLIELSRRL 238
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
+ +A++ ++ G P++V YN++I + EA+ ++ +M G+ N +
Sbjct: 239 CDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSY 298
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
+++L + + EA+ EM LD+ +++++ Y ++ EA + +
Sbjct: 299 STLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRK 358
Query: 379 KRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQ 438
++P+V S+N + RV EA+ L + M R N ++Y
Sbjct: 359 MDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY--------------- 403
Query: 439 LVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
N ++ Y + + E A V +M + N TY T +
Sbjct: 404 ---------------------NTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTII 442
Query: 499 KELCAKGKV 507
GK+
Sbjct: 443 SIWGKAGKL 451
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 165/340 (48%), Gaps = 10/340 (2%)
Query: 180 YTTMIRGFCKMGMVESARKVFDEMR----CEPNAITYNTMIHGLCKKGEMDGAMRVFNRF 235
+ + + F G + + ++F M+ C+PN Y MI L ++G +D + VF+
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 236 AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
S+ V ++T LI+ Y + G + +L + M+ + P+++TYN +I C G
Sbjct: 168 P-SQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARGG 225
Query: 296 VDEAK--RMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAY 353
+D + ++MR +GI+ ++ T ++L + G +EA + M G+ D+ Y
Sbjct: 226 LDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTY 285
Query: 354 SVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPR 413
S +V + K+ + + +L EM + P ++S+N + ++EA+ + M
Sbjct: 286 SHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA 345
Query: 414 MGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEE 473
GC+PN +YS+++ L GR V +L M S + DA YN L+ + E G +
Sbjct: 346 AGCTPNANTYSVLL-NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 474 MALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLK 513
+ +DM++++ + +TY + C KG + E+ K
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFA-CGKGGLHEDARK 443
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 172/382 (45%), Gaps = 9/382 (2%)
Query: 107 SDFLASKFINAFGDRGDIRGAIHWFHKAKAS--GPCALSCNAVLGVLVRAN-RVNLAKAI 163
S F + INA+G G ++ + K P L+ N V+ R +
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 164 YDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLC 220
+ ++ E ++PD+ TY T++ G+ + A VF M P+ TY+ ++
Sbjct: 235 FAEMRHEG-IQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFG 293
Query: 221 KKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNV 280
K ++ + A S PD+ ++ L++ Y+K G ++EA+ +MQ GC PN
Sbjct: 294 KLRRLEKVCDLLGEMASGGSL-PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNA 352
Query: 281 VTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKE 340
TY+ L+ SG D+ +++ +M+ + AT +++ F G +E + +
Sbjct: 353 NTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Query: 341 MVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERK 400
MV ++ D++ Y I+ K G +A IL+ M A + PS ++ V
Sbjct: 413 MVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAAL 472
Query: 401 LEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYN 460
EEA++ M +G +P+ ++ ++ + G ++ E ++S ++ SG + +N
Sbjct: 473 YEEALVAFNTMHEVGSNPSIETFHSLLYSFAR-GGLVKESEAILSRLVDSGIPRNRDTFN 531
Query: 461 CLLGGYCEDGDEEMALKTVYDM 482
+ Y + G E A+KT DM
Sbjct: 532 AQIEAYKQGGKFEEAVKTYVDM 553
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 193/422 (45%), Gaps = 16/422 (3%)
Query: 105 KLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKA 162
K ++ + + I+ G G + + F + + G S A++ R R +
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 163 IYDQVVKEALVEPDVFTYTTMIRGFCKMGM-VESARKVFDEMRCE---PNAITYNTMIHG 218
+ D++ E + P + TY T+I + G+ E +F EMR E P+ +TYNT++
Sbjct: 198 LLDRMKNEK-ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA 256
Query: 219 LCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQP 278
+G D A VF R PD+ T++ L++ + K +++ + + EM G P
Sbjct: 257 CAIRGLGDEAEMVF-RTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP 315
Query: 279 NVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHM 338
++ +YN L+E SG++ EA + +M+ G N T + +L F GR ++ +
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 339 KEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAE 398
EM S D D Y++++ + + G E V++ +MV + ++P + ++ +
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 399 RKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELV---SSMLQSGHNLD 455
E+A +L+ M P+ +Y+ G+ + G+ L EE + ++M + G N
Sbjct: 436 GLHEDARKILQYMTANDIVPSSKAYT----GVIEAFGQAALYEEALVAFNTMHEVGSNPS 491
Query: 456 ATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLKRC 515
++ LL + G + + + ++D N+DT+ ++ GK EE +K
Sbjct: 492 IETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKF-EEAVKTY 550
Query: 516 VD 517
VD
Sbjct: 551 VD 552
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 168/387 (43%), Gaps = 10/387 (2%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
+ A+ G I+ A+ FH+ +A+G P A + + +L + ++ R + + ++ ++ K +
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM-KSS 381
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGA 228
+PD TY +I F + G + +F +M EP+ TY +I C KG +
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA-CGKGGLHED 440
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
R ++ + P +T +I+ + + +EAL M E G P++ T+++L+
Sbjct: 441 ARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLY 500
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
G V E++ ++S++ GI N T + ++ + G+ EEA+K +M D
Sbjct: 501 SFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDP 560
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
D + +++ Y E EM A + PS+ + + V + ++ LL
Sbjct: 561 DERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELL 620
Query: 409 KNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCE 468
+ M S +I G Q+VE ++ + G L YN LL
Sbjct: 621 EEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWW 680
Query: 469 DGDEEMALKTVYDMIDKSF---LFNKD 492
G +E A + + + + LF K+
Sbjct: 681 LGQKERAARVLNEATKRGLFPELFRKN 707
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 117/248 (47%), Gaps = 4/248 (1%)
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRV 231
PD+ +Y ++ + K G ++ A VF +M+ C PNA TY+ +++ + G D ++
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 232 FNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLC 291
F +S + PD T+ LI+ + + G +E + +M E+ +P++ TY +I
Sbjct: 375 FLEM-KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACG 433
Query: 292 LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
G ++A++++ M I + T +++ F EEA+ M G + ++
Sbjct: 434 KGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIE 493
Query: 352 AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
+ ++ + + G E+ +IL +V + + +FNA K EEAV +M
Sbjct: 494 TFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDM 553
Query: 412 PRMGCSPN 419
+ C P+
Sbjct: 554 EKSRCDPD 561
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 192/406 (47%), Gaps = 10/406 (2%)
Query: 83 ITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIR-GAIHWFHKAKASGPCA 141
I+ VL+S +L + ++S + +N F + G + W K +
Sbjct: 75 ISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSV 134
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
+ + ++ + + L + + + K+ ++ +V T+ ++R + + V+ A F+
Sbjct: 135 RAYHMMIESTAKIRQYKLMWDLINAMRKKKML--NVETFCIVMRKYARAQKVDEAIYAFN 192
Query: 202 EMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
M PN + +N ++ LCK + A VF + + PD T++ L++G+ K
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFT--PDSKTYSILLEGWGKE 250
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
+ +A +EM + GC P++VTY+ +++ LC +G VDEA ++ M K
Sbjct: 251 PNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY 310
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
+ ++ + R EEA+ EM GM DV ++ ++ +CK + +L+EM +
Sbjct: 311 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKS 370
Query: 379 KRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQ 438
K + P+ S N + R L+ + +EA + + M ++ C P+ +Y++VI C+ K M+
Sbjct: 371 KGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCE-KKEME 428
Query: 439 LVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMID 484
+++ M + G ++ L+ G CE+ + A + +MI+
Sbjct: 429 TADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIE 474
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 177/373 (47%), Gaps = 16/373 (4%)
Query: 59 FFNWASNPQPNPNNYSHPRSCYAAI---TDVLLSHSLFSTADSLLRRSNKLSDFLASKFI 115
FF W+ + +Y H Y + T + + L + +R+ L+ +
Sbjct: 120 FFQWSEKQR----HYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVM 175
Query: 116 NAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALV 173
+ + AI+ F+ + P ++ N +L L ++ V A+ +++ +
Sbjct: 176 RKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR--F 233
Query: 174 EPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMR 230
PD TY+ ++ G+ K + AR+VF EM C P+ +TY+ M+ LCK G +D A+
Sbjct: 234 TPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALG 293
Query: 231 VFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGL 290
+ R + C+P ++ L+ Y ++EA++ EM+ G + +V +N+LI
Sbjct: 294 IV-RSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 352
Query: 291 CLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDV 350
C + + R++ +M+ KG+ N + +L+ G +EA ++M+ + + D
Sbjct: 353 CKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDA 411
Query: 351 KAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKN 410
Y++++ +C+ + A + + M K + PS+ +F+ + L ER ++A +LL+
Sbjct: 412 DTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEE 471
Query: 411 MPRMGCSPNFLSY 423
M MG P+ +++
Sbjct: 472 MIEMGIRPSGVTF 484
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 45/309 (14%)
Query: 206 EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL 265
E + Y+ MI K + + N + K +V TF ++ Y++ +V EA+
Sbjct: 131 EHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML--NVETFCIVMRKYARAQKVDEAI 188
Query: 266 NCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGF 325
M++ PN+V +N L+ LC S NV +A+ + MR + D+ T + +L+G+
Sbjct: 189 YAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDS-KTYSILLEGW 247
Query: 326 CMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSV 385
+A + +EM+ G D+ YS++V+ CK G+ EA+ I+R M PS+
Sbjct: 248 GKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRS-----MDPSI 302
Query: 386 SSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVS 445
C P YS+ L G +EE V
Sbjct: 303 ------------------------------CKPTTFIYSV----LVHTYGTENRLEEAVD 328
Query: 446 SMLQ---SGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELC 502
+ L+ SG D ++N L+G +C+ + + + +M K N + ++ L
Sbjct: 329 TFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLI 388
Query: 503 AKGKVKEEY 511
+G+ E +
Sbjct: 389 ERGEKDEAF 397
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 90/171 (52%), Gaps = 6/171 (3%)
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAM 229
++ DV + ++I FCK +++ +V EM+ + PN+ + N ++ L ++GE D A
Sbjct: 338 MKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAF 397
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
VF + K C PD T+T +I + ++ E++ A K M+++G P++ T++ LI G
Sbjct: 398 DVFRKMI--KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLING 455
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKE 340
LC +A ++ +M GI+ + T L+ + E+ +K + E
Sbjct: 456 LCEERTTQKACVLLEEMIEMGIRPSGVT-FGRLRQLLIKEEREDVLKFLNE 505
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 151/343 (44%), Gaps = 39/343 (11%)
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAM 229
+EPD T +R C+ G V+ A+ + E+ P+ TYN ++ LCK ++
Sbjct: 155 LEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVY 214
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
+ + +PD+V+FT LID ++EA+ + ++ G +P+ YN +++G
Sbjct: 215 EFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG 274
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
C EA + KM+ +G++ + T +++ G GR EEA ++K MV G + D
Sbjct: 275 FCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPD 334
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
Y+ ++N C+ G+ A+S+L EM A+
Sbjct: 335 TATYTSLMNGMCRKGESLGALSLLEEMEAR------------------------------ 364
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
GC+PN +Y+ ++ GLCK + M EL M SG L++ Y L+ +
Sbjct: 365 -----GCAPNDCTYNTLLHGLCKAR-LMDKGMELYEMMKSSGVKLESNGYATLVRSLVKS 418
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYL 512
G A + +D L + Y T L K KE+ L
Sbjct: 419 GKVAEAYEVFDYAVDSKSLSDASAYSTLETTLKWLKKAKEQGL 461
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 172/363 (47%), Gaps = 16/363 (4%)
Query: 160 AKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDE-MRCEPN----AITYNT 214
AK++++ + + + D+ + ++++ + + +V K+F ++ +PN T+
Sbjct: 68 AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLI 127
Query: 215 MIHGLCKKGE--MDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQ 272
++ C+ + + RV N + PD VT + + G V EA + MKE+
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNN-GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 186
Query: 273 EQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK-GIKDNVATNTSMLKGFCMVGRS 331
E+ P+ TYN L++ LC ++ + +MR +K ++ + T ++ C
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 332 EEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAV 391
EA+ + ++ + G D Y+ I+ +C + K SEAV + ++M + ++P ++N +
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Query: 392 FRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSG 451
L ++EEA + LK M G P+ +Y+ ++ G+C+ KG L+ M G
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR-KGESLGALSLLEEMEARG 365
Query: 452 HNLDATMYNCLLGGYCEDG--DEEMALKTVYDMIDKSFL-FNKDTYCTFVKELCAKGKVK 508
+ YN LL G C+ D+ M L Y+M+ S + + Y T V+ L GKV
Sbjct: 366 CAPNDCTYNTLLHGLCKARLMDKGMEL---YEMMKSSGVKLESNGYATLVRSLVKSGKVA 422
Query: 509 EEY 511
E Y
Sbjct: 423 EAY 425
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 133/276 (48%), Gaps = 4/276 (1%)
Query: 135 KASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVE 194
K S P + N +L L + +++ D++ + V+PD+ ++T +I C +
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247
Query: 195 SARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTL 251
A + ++ +P+ YNT++ G C + A+ V+ + E + PD +T+ TL
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE-EGVEPDQITYNTL 306
Query: 252 IDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
I G SK G V+EA +K M + G +P+ TY +L+ G+C G A ++ +M +G
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGC 366
Query: 312 KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVS 371
N T ++L G C ++ ++ + M S G+ L+ Y+ +V K GK +EA
Sbjct: 367 APNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYE 426
Query: 372 ILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
+ V + S+++ + L +K +E L+
Sbjct: 427 VFDYAVDSKSLSDASAYSTLETTLKWLKKAKEQGLV 462
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 120/291 (41%), Gaps = 6/291 (2%)
Query: 221 KKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM--QEQGCQP 278
K + A +FN A + D+ +++ Y V + + + + + +P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 279 NVVTYNALIEGLCLS--GNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIK 336
T+ L+ C + ++ R+++ M G++ + T ++ C GR +EA
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 337 HMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK-RMKPSVSSFNAVFRVL 395
MKE+ + D Y+ ++ CK + EM +KP + SF + +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 396 VAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLD 455
+ L EA+ L+ + G P+ Y+ ++ G C + + V + M + G D
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG-VYKKMKEEGVEPD 299
Query: 456 ATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGK 506
YN L+ G + G E A + M+D + + TY + + +C KG+
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGE 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 4/180 (2%)
Query: 341 MVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERK 400
MV+ G++ D + V C+ G+ EA +++E+ K P ++N + + L +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 401 LEEAVLLLKNM-PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMY 459
L + M P+ +S++I+I +C K ++ LVS + +G D +Y
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKN-LREAMYLVSKLGNAGFKPDCFLY 268
Query: 460 NCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEE--YLKRCVD 517
N ++ G+C A+ M ++ ++ TY T + L G+V+E YLK VD
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 191/426 (44%), Gaps = 23/426 (5%)
Query: 92 LFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAI---HWFHKAKASGPCALSCNAV- 147
F + S L R++ +S + D G A+ W + SG L +
Sbjct: 126 FFDSVKSELLRTDLVS------LVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIE 179
Query: 148 --LGVLVRANRVNLAKAIYDQV-VKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD--- 201
+ +L R ++ ++A + D++ ++E L+ DV YTT++ + + G E A +F+
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLL--DVRAYTTILHAYSRTGKYEKAIDLFERMK 237
Query: 202 EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAE--SKSCRPDVVTFTTLIDGYSKRG 259
EM P +TYN ++ K G ++ E SK + D T +T++ ++ G
Sbjct: 238 EMGPSPTLVTYNVILDVFGKMGR--SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREG 295
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
++EA E++ G +P VTYNAL++ +G EA ++ +M + T
Sbjct: 296 LLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYN 355
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
++ + G S+EA ++ M +G+ + Y+ +++ Y K GK EA+ + M
Sbjct: 356 ELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA 415
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
P+ ++NAV +L + + E + +L +M GCSPN +++ ++ LC KG +
Sbjct: 416 GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKF 474
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
V + M G D +N L+ Y G E A K +M F TY +
Sbjct: 475 VNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLN 534
Query: 500 ELCAKG 505
L KG
Sbjct: 535 ALARKG 540
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 144/320 (45%), Gaps = 7/320 (2%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
+C+ VL R + AK + ++ K EP TY +++ F K G+ A V
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAEL-KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLK 340
Query: 202 EMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
EM C +++TYN ++ + G A V + K P+ +T+TT+ID Y K
Sbjct: 341 EMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTK-KGVMPNAITYTTVIDAYGKA 399
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
G+ EAL M+E GC PN TYNA++ L +E +M+ M+ G N AT
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
+ML G + + +EM S G + D ++ +++ Y + G +A + EM
Sbjct: 460 NTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR 519
Query: 379 KRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQ 438
V+++NA+ L + ++ +M G P SYS+++ C KG
Sbjct: 520 AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML--QCYAKGGNY 577
Query: 439 LVEELVSSMLQSGHNLDATM 458
L E + + ++ G + M
Sbjct: 578 LGIERIENRIKEGQIFPSWM 597
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 124/502 (24%), Positives = 206/502 (41%), Gaps = 96/502 (19%)
Query: 92 LFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLG 149
+ D + + K +F S ++A G +R A +F + K+ G P ++ NA+L
Sbjct: 265 ILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQ 324
Query: 150 VLVRANRVNLAKAI---------------YDQVV---------KEAL----------VEP 175
V +A A ++ Y+++V KEA V P
Sbjct: 325 VFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMP 384
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEMR------------------------------- 204
+ TYTT+I + K G + A K+F M+
Sbjct: 385 NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
Query: 205 -------CEPNAITYNTMIHGLCKKGEMDGAMRVFNR-FAESKSC--RPDVVTFTTLIDG 254
C PN T+NTM+ LC MD + NR F E KSC PD TF TLI
Sbjct: 445 CDMKSNGCSPNRATWNTML-ALCGNKGMD---KFVNRVFREMKSCGFEPDRDTFNTLISA 500
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
Y + G +A EM G V TYNAL+ L G+ + ++S M+ KG K
Sbjct: 501 YGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPT 560
Query: 315 VATNTSMLKGFCMVG------RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSE 368
+ + ML+ + G R E IK ++ M L ++ N C+ SE
Sbjct: 561 ETSYSLMLQCYAKGGNYLGIERIENRIKE-GQIFPSWMLLRTL---LLANFKCRALAGSE 616
Query: 369 -AVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI 427
A ++ ++ KP + FN++ + ++A +L+++ G SP+ ++Y+ ++
Sbjct: 617 RAFTLFKK---HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLM 673
Query: 428 CGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSF 487
+ +G EE++ ++ +S D YN ++ G+C G + A++ + +M ++
Sbjct: 674 DMYVR-RGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
Query: 488 LFNKDTYCTFVKELCAKGKVKE 509
TY TFV A G E
Sbjct: 733 RPCIFTYNTFVSGYTAMGMFAE 754
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 131/271 (48%), Gaps = 13/271 (4%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
+NA +GD R + K+ G P S + +L + L + +KE
Sbjct: 532 LLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNY-LGIERIENRIKEG 590
Query: 172 LVEPDVFTYTTMIRGFCK---MGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGA 228
+ P T++ K + E A +F + +P+ + +N+M+ + D A
Sbjct: 591 QIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQA 650
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
+ E PD+VT+ +L+D Y +RGE +A +K +++ +P++V+YN +I+
Sbjct: 651 EGILESIRED-GLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIK 709
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG---RSEEAIKHMKEMVSRG 345
G C G + EA RM+S+M +GI+ + T + + G+ +G E+ I+ M + R
Sbjct: 710 GFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRP 769
Query: 346 MDLDVKAYSVIVNEYCKIGKPSEAVSILREM 376
+L K ++V+ YC+ GK SEA+ + ++
Sbjct: 770 NELTFK---MVVDGYCRAGKYSEAMDFVSKI 797
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 175/407 (42%), Gaps = 76/407 (18%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVN-LAKAIYD------ 165
I+A+G G A+ F+ K +G P + NAVL +L + +R N + K + D
Sbjct: 393 IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 452
Query: 166 ---------------------------QVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
+ +K EPD T+ T+I + + G A K
Sbjct: 453 SPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 199 VFDEM-RCEPNA--ITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
++ EM R NA TYN +++ L +KG+ V + +SK +P +++ ++ Y
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM-KSKGFKPTETSYSLMLQCY 571
Query: 256 SKRGE---VQEALNCMKEMQ--------------------------------EQGCQPNV 280
+K G ++ N +KE Q + G +P++
Sbjct: 572 AKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDM 631
Query: 281 VTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKE 340
V +N+++ + D+A+ ++ +R G+ ++ T S++ + G +A + +K
Sbjct: 632 VIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKT 691
Query: 341 MVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERK 400
+ + D+ +Y+ ++ +C+ G EAV +L EM + ++P + ++N A
Sbjct: 692 LEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGM 751
Query: 401 LEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM 447
E +++ M + C PN L++ +V+ G C+ G+ + VS +
Sbjct: 752 FAEIEDVIECMAKNDCRPNELTFKMVVDGYCRA-GKYSEAMDFVSKI 797
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 93/166 (56%), Gaps = 5/166 (3%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMG---MVESARKVFD 201
N++L + R N + A+ I + + ++ L PD+ TY +++ + + G E K +
Sbjct: 635 NSMLSIFTRNNMYDQAEGILESIREDGL-SPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 202 EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
+ + +P+ ++YNT+I G C++G M A+R+ + E + RP + T+ T + GY+ G
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTE-RGIRPCIFTYNTFVSGYTAMGMF 752
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR 307
E + ++ M + C+PN +T+ +++G C +G EA +SK++
Sbjct: 753 AEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 137/297 (46%), Gaps = 7/297 (2%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
I+A+G G A + + +G C + NA+L L R + + + K
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM-KSK 555
Query: 172 LVEPDVFTYTTMIRGFCKMG---MVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGA 228
+P +Y+ M++ + K G +E E + P+ + T++ K + G+
Sbjct: 556 GFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGS 615
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
R F F + +PD+V F +++ +++ +A ++ ++E G P++VTYN+L++
Sbjct: 616 ERAFTLF-KKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMD 674
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
G +A+ ++ + +K ++ + +++KGFC G +EA++ + EM RG+
Sbjct: 675 MYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAV 405
+ Y+ V+ Y +G +E ++ M +P+ +F V K EA+
Sbjct: 735 CIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 791
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 112/267 (41%), Gaps = 37/267 (13%)
Query: 244 DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMM 303
DV +TT++ YS+ G+ ++A++ + M+E G P +VTYN +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVI----------------- 251
Query: 304 SKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKH-MKEMVSRGMDLDVKAYSVIVNEYCK 362
L F +GRS I + EM S+G+ D S +++ +
Sbjct: 252 ------------------LDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAR 293
Query: 363 IGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLS 422
G EA E+ + +P ++NA+ +V EA+ +LK M C + ++
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVT 353
Query: 423 YSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDM 482
Y+ ++ + G + ++ M + G +A Y ++ Y + G E+ ALK Y M
Sbjct: 354 YNELVAAYVRA-GFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
Query: 483 IDKSFLFNKDTYCTFVKELCAKGKVKE 509
+ + N TY + L K + E
Sbjct: 413 KEAGCVPNTCTYNAVLSLLGKKSRSNE 439
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 180/386 (46%), Gaps = 10/386 (2%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P A + +A++ RA + A + D +++ A + P TY +I G A +
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAA-IAPSRSTYNNLINACGSSGNWREALE 234
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
V +M P+ +T+N ++ + A+ F +K RPD TF +I
Sbjct: 235 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK-VRPDTTTFNIIIYCL 293
Query: 256 SKRGEVQEALNCMKEMQEQ--GCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKD 313
SK G+ +AL+ M+E+ C+P+VVT+ +++ + G ++ + + M +G+K
Sbjct: 294 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 353
Query: 314 NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL 373
N+ + +++ + + G S A+ + ++ G+ DV +Y+ ++N Y + +P +A +
Sbjct: 354 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Query: 374 REMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKV 433
M +R KP+V ++NA+ + L EAV + + M + G PN +S ++ +
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 473
Query: 434 KGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDT 493
K ++ V+ ++S+ G NL+ YN +G Y + E A+ M K + T
Sbjct: 474 KKKVN-VDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 532
Query: 494 YCTFVKELCAKGKVKE--EYLKRCVD 517
+ + C K E YLK D
Sbjct: 533 FTILISGSCRMSKYPEAISYLKEMED 558
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 179/437 (40%), Gaps = 41/437 (9%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
+ ++ + +G+I F A G P +S NA++G A ++ + +
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMD 226
++ PDV +YT ++ + + A++VF MR E PN +TYN +I G +
Sbjct: 384 NGII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 442
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
A+ +F R E +P+VV+ TL+ S+ + + Q +G N YN+
Sbjct: 443 EAVEIF-RQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 501
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
I + +++A + MR K +K + T T ++ G C + + EAI ++KEM +
Sbjct: 502 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 561
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
L + YS ++ Y K G+ +EA SI +M +P V ++ ++ A K +A
Sbjct: 562 PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACE 621
Query: 407 LLKNMPRMGCSPNFLSYSIV----------------------------------ICGLCK 432
L M G P+ ++ S + I C
Sbjct: 622 LFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACN 681
Query: 433 VKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKD 492
+ +L+ M +L + N +L + + G E +K Y +I N
Sbjct: 682 TLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLK 741
Query: 493 TYCTFVKELCAKGKVKE 509
TY ++ L A G ++
Sbjct: 742 TYAILLEHLLAVGNWRK 758
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 135/293 (46%), Gaps = 8/293 (2%)
Query: 180 YTTMIRGFCKMGMVESARKVFDEMRCEPNAIT----YNTMIHGLCKKGEMDGAMRVFNRF 235
+ +IR + G +E VF M+ + N YN MI + +D A +F
Sbjct: 110 FPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEM 169
Query: 236 AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
+ SC+PD T+ LI+ + + G+ + A+N M +M P+ TYN LI SGN
Sbjct: 170 -QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 228
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSV 355
EA + KM G+ ++ T+ +L + + +A+ + + M + D +++
Sbjct: 229 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 288
Query: 356 IVNEYCKIGKPSEAVSILREMVAKRM--KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPR 413
I+ K+G+ S+A+ + M KR +P V +F ++ + + ++E + + M
Sbjct: 289 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 348
Query: 414 MGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGY 466
G PN +SY+ ++ G V G ++ + Q+G D Y CLL Y
Sbjct: 349 EGLKPNIVSYNALM-GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 400
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 125/291 (42%), Gaps = 44/291 (15%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR 204
N+ +G + A + A A+Y Q +++ V+ D T+T +I G C+M A EM
Sbjct: 499 NSAIGSYINAAELEKAIALY-QSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557
Query: 205 CEPNAIT---YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
+T Y++++ K+G++ A +FN+ + C PDV+ +T+++ Y+ +
Sbjct: 558 DLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGCEPDVIAYTSMLHAYNASEKW 616
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI---------- 311
+A EM+ G +P+ + +AL+ G +M MR K I
Sbjct: 617 GKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEI 676
Query: 312 -------------------------KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
++ ML F G+ E +K ++++ G+
Sbjct: 677 FSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGV 736
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVA 397
+++K Y++++ +G + + +L M ++PS N ++R +++
Sbjct: 737 GINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPS----NQMYRDIIS 783
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/358 (19%), Positives = 150/358 (41%), Gaps = 14/358 (3%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
I+A+G G + A+ F + + G P +S +L R+ + K D V+ A
Sbjct: 431 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK----KVNVDTVLSAA 486
Query: 172 L---VEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEM 225
+ + Y + I + +E A ++ MR + +++T+ +I G C+ +
Sbjct: 487 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 546
Query: 226 DGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNA 285
A+ E S +++++ YSK+G+V EA + +M+ GC+P+V+ Y +
Sbjct: 547 PEAISYLKEM-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTS 605
Query: 286 LIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG 345
++ S +A + +M GI+ + +++++ F G+ M M +
Sbjct: 606 MLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKE 665
Query: 346 MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAV 405
+ + I + + + A+ +++ M S+ N + + K+E +
Sbjct: 666 IPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMM 725
Query: 406 LLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLL 463
L + G N +Y+I++ L V G + E++ M +G MY ++
Sbjct: 726 KLFYKIIASGVGINLKTYAILLEHLLAV-GNWRKYIEVLEWMSGAGIQPSNQMYRDII 782
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 171/364 (46%), Gaps = 6/364 (1%)
Query: 68 PNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSN-KLSDFLASKFINAFGDRGDIRG 126
P P + +P ++ +L A+ L ++ + A++ + + + G
Sbjct: 285 PTPRQHCNPGYVVENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALG 344
Query: 127 AIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRG 186
+W + + ++G L RA + + D++V++ +P+ TY +I
Sbjct: 345 FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDG-CKPNTVTYNRLIHS 403
Query: 187 FCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRP 243
+ + ++ A VF++M+ CEP+ +TY T+I K G +D AM ++ R E+ P
Sbjct: 404 YGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEA-GLSP 462
Query: 244 DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMM 303
D T++ +I+ K G + A EM QGC PN+VT+N +I + N + A ++
Sbjct: 463 DTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLY 522
Query: 304 SKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKI 363
M+ G + + T + +++ G EEA EM + D Y ++V+ + K
Sbjct: 523 RDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKA 582
Query: 364 GKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSY 423
G +A + M+ ++P+V + N++ + ++ EA LL++M +G P+ +Y
Sbjct: 583 GNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTY 642
Query: 424 SIVI 427
++++
Sbjct: 643 TLLL 646
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 176/361 (48%), Gaps = 20/361 (5%)
Query: 12 PSSIVTTITSLLQT-----PDSEPLKKFSCYLTPSLVTQVIKNTHNPHHALFFFNWASNP 66
P +V ++S+L+ E L F + QV+K N +AL FF W
Sbjct: 293 PGYVVENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKR- 351
Query: 67 QPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLL----RRSNKLSDFLASKFINAFGDRG 122
QP + H Y + L F + LL R K + ++ I+++G
Sbjct: 352 QPG---FKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRAN 408
Query: 123 DIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTY 180
++ A++ F++ + +G P ++ ++ + +A +++A +Y Q ++EA + PD FTY
Sbjct: 409 YLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMY-QRMQEAGLSPDTFTY 467
Query: 181 TTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAE 237
+ +I K G + +A ++F EM C PN +T+N MI K + A++++ R +
Sbjct: 468 SVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLY-RDMQ 526
Query: 238 SKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVD 297
+ +PD VT++ +++ G ++EA EMQ + P+ Y L++ +GNVD
Sbjct: 527 NAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVD 586
Query: 298 EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIV 357
+A + M G++ NV T S+L F V R EA ++ M++ G+ ++ Y++++
Sbjct: 587 KAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Query: 358 N 358
+
Sbjct: 647 S 647
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 129/303 (42%), Gaps = 41/303 (13%)
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKE 270
TY TM+ L + + ++ + C+P+ VT+ LI Y + ++EA+N +
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRD-GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQ 419
Query: 271 MQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGR 330
MQE GC+P+ VTY LI+ +G +D A M +M
Sbjct: 420 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRM------------------------ 455
Query: 331 SEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNA 390
+EA G+ D YSVI+N K G A + EMV + P++ +FN
Sbjct: 456 -QEA----------GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNI 504
Query: 391 VFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV--ICGLCKVKGRMQLVEELVSSML 448
+ + R E A+ L ++M G P+ ++YSIV + G C G ++ E + + M
Sbjct: 505 MIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC---GFLEEAEGVFAEMQ 561
Query: 449 QSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
+ D +Y L+ + + G+ + A + M+ N T + + ++
Sbjct: 562 RKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMS 621
Query: 509 EEY 511
E Y
Sbjct: 622 EAY 624
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 180/386 (46%), Gaps = 10/386 (2%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P A + +A++ RA + A + D +++ A + P TY +I G A +
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAA-IAPSRSTYNNLINACGSSGNWREALE 102
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
V +M P+ +T+N ++ + A+ F +K RPD TF +I
Sbjct: 103 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK-VRPDTTTFNIIIYCL 161
Query: 256 SKRGEVQEALNCMKEMQEQ--GCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKD 313
SK G+ +AL+ M+E+ C+P+VVT+ +++ + G ++ + + M +G+K
Sbjct: 162 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 221
Query: 314 NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL 373
N+ + +++ + + G S A+ + ++ G+ DV +Y+ ++N Y + +P +A +
Sbjct: 222 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
Query: 374 REMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKV 433
M +R KP+V ++NA+ + L EAV + + M + G PN +S ++ +
Sbjct: 282 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 341
Query: 434 KGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDT 493
K ++ V+ ++S+ G NL+ YN +G Y + E A+ M K + T
Sbjct: 342 KKKVN-VDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 400
Query: 494 YCTFVKELCAKGKVKE--EYLKRCVD 517
+ + C K E YLK D
Sbjct: 401 FTILISGSCRMSKYPEAISYLKEMED 426
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 179/437 (40%), Gaps = 41/437 (9%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
+ ++ + +G+I F A G P +S NA++G A ++ + +
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMD 226
++ PDV +YT ++ + + A++VF MR E PN +TYN +I G +
Sbjct: 252 NGII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 310
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
A+ +F R E +P+VV+ TL+ S+ + + Q +G N YN+
Sbjct: 311 EAVEIF-RQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 369
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
I + +++A + MR K +K + T T ++ G C + + EAI ++KEM +
Sbjct: 370 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 429
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
L + YS ++ Y K G+ +EA SI +M +P V ++ ++ A K +A
Sbjct: 430 PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACE 489
Query: 407 LLKNMPRMGCSPNFLSYSIV----------------------------------ICGLCK 432
L M G P+ ++ S + I C
Sbjct: 490 LFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACN 549
Query: 433 VKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKD 492
+ +L+ M +L + N +L + + G E +K Y +I N
Sbjct: 550 TLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLK 609
Query: 493 TYCTFVKELCAKGKVKE 509
TY ++ L A G ++
Sbjct: 610 TYAILLEHLLAVGNWRK 626
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 124/264 (46%), Gaps = 5/264 (1%)
Query: 205 CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEA 264
C N I YN MI + +D A +F + SC+PD T+ LI+ + + G+ + A
Sbjct: 8 CARNDI-YNMMIRLHARHNWVDQARGLFFEM-QKWSCKPDAETYDALINAHGRAGQWRWA 65
Query: 265 LNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKG 324
+N M +M P+ TYN LI SGN EA + KM G+ ++ T+ +L
Sbjct: 66 MNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSA 125
Query: 325 FCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM--K 382
+ + +A+ + + M + D +++I+ K+G+ S+A+ + M KR +
Sbjct: 126 YKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 185
Query: 383 PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEE 442
P V +F ++ + + ++E + + M G PN +SY+ ++ G V G
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM-GAYAVHGMSGTALS 244
Query: 443 LVSSMLQSGHNLDATMYNCLLGGY 466
++ + Q+G D Y CLL Y
Sbjct: 245 VLGDIKQNGIIPDVVSYTCLLNSY 268
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 125/291 (42%), Gaps = 44/291 (15%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR 204
N+ +G + A + A A+Y Q +++ V+ D T+T +I G C+M A EM
Sbjct: 367 NSAIGSYINAAELEKAIALY-QSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 425
Query: 205 CEPNAIT---YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
+T Y++++ K+G++ A +FN+ + C PDV+ +T+++ Y+ +
Sbjct: 426 DLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGCEPDVIAYTSMLHAYNASEKW 484
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI---------- 311
+A EM+ G +P+ + +AL+ G +M MR K I
Sbjct: 485 GKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEI 544
Query: 312 -------------------------KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
++ ML F G+ E +K ++++ G+
Sbjct: 545 FSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGV 604
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVA 397
+++K Y++++ +G + + +L M ++PS N ++R +++
Sbjct: 605 GINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPS----NQMYRDIIS 651
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/338 (19%), Positives = 142/338 (42%), Gaps = 13/338 (3%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
I+A+G G + A+ F + + G P +S +L R+ + K D V+ A
Sbjct: 299 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK----KVNVDTVLSAA 354
Query: 172 L---VEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEM 225
+ + Y + I + +E A ++ MR + +++T+ +I G C+ +
Sbjct: 355 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 414
Query: 226 DGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNA 285
A+ E S +++++ YSK+G+V EA + +M+ GC+P+V+ Y +
Sbjct: 415 PEAISYLKEM-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTS 473
Query: 286 LIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG 345
++ S +A + +M GI+ + +++++ F G+ M M +
Sbjct: 474 MLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKE 533
Query: 346 MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAV 405
+ + I + + + A+ +++ M S+ N + + K+E +
Sbjct: 534 IPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMM 593
Query: 406 LLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEEL 443
L + G N +Y+I++ L V + +E L
Sbjct: 594 KLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVL 631
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 188/415 (45%), Gaps = 35/415 (8%)
Query: 53 PHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLAS 112
PH A F + P+ S+ + AA+T S+ S + + KL +
Sbjct: 61 PHEAQTVFKTLAETGHRPSLISYT-TLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFN 119
Query: 113 KFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKE 170
INAF + G++ A+ K K G P + N ++ A + + + D +++E
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 171 ALVE--PDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGE- 224
V+ P++ T+ +++ +CK VE A +V +M P+ +TYNT+ +KGE
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 225 MDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
+ V + + +P+ T ++ GY + G V++ L ++ M+E + N+V +N
Sbjct: 240 VRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFN 299
Query: 285 ALIEGLC-------------------------LSGNVDEAKRMMSKMRLKGIKDNVATNT 319
+LI G L GN ++++ M+ +K +V T +
Sbjct: 300 SLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYS 359
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
+++ + G E+A + KEMV G+ D AYS++ Y + +P +A +L ++ +
Sbjct: 360 TVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE 419
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
+P+V F V + +++A+ + M + G SPN ++ ++ G +VK
Sbjct: 420 S-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVK 473
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 143/271 (52%), Gaps = 11/271 (4%)
Query: 215 MIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQ 274
+++ L ++G A VF AE+ RP ++++TTL+ + + + + + E+++
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGH-RPSLISYTTLLAAMTVQKQYGSISSIVSEVEQS 109
Query: 275 GCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEA 334
G + + + +NA+I SGN+++A + + KM+ G+ +T +++KG+ + G+ E +
Sbjct: 110 GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERS 169
Query: 335 IKHMKEMVSRG-MDL--DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAV 391
+ + M+ G +D+ +++ ++V+V +CK K EA ++++M ++P ++N +
Sbjct: 170 SELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Query: 392 FRVLV--AERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
V E E+ ++ K + + PN + IV+ G C+ +GR++ V M +
Sbjct: 230 ATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR-EGRVRDGLRFVRRMKE 288
Query: 450 SGHNLDATMYNCLLGGYCE----DGDEEMAL 476
+ ++N L+ G+ E DG +E+ L
Sbjct: 289 MRVEANLVVFNSLINGFVEVMDRDGIDEVTL 319
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 125/263 (47%), Gaps = 11/263 (4%)
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
G R E SCR V + T L++ +RG EA K + E G +P++++Y L
Sbjct: 28 GQYRFCKSCVEGSSCR-TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTL 86
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
+ + + ++S++ G K + +++ F G E+A++ + +M G+
Sbjct: 87 LAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGL 146
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK---RMKPSVSSFNAVFRVLVAERKLEE 403
+ Y+ ++ Y GKP + +L M+ + + P++ +FN + + ++K+EE
Sbjct: 147 NPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEE 206
Query: 404 AVLLLKNMPRMGCSPNFLSY-SIVICGLCK---VKGRMQLVEELVSSMLQSGHNLDATMY 459
A ++K M G P+ ++Y +I C + K V+ ++VE++V ++ +
Sbjct: 207 AWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV---MKEKAKPNGRTC 263
Query: 460 NCLLGGYCEDGDEEMALKTVYDM 482
++GGYC +G L+ V M
Sbjct: 264 GIVVGGYCREGRVRDGLRFVRRM 286
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 13/227 (5%)
Query: 167 VVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKG 223
++KE V+ DV TY+T++ + G +E A +VF EM +P+A Y+ + G +
Sbjct: 345 LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAK 404
Query: 224 EMDGAMRVFNRF-AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVT 282
E A + ES RP+VV FTT+I G+ G + +A+ +M + G PN+ T
Sbjct: 405 EPKKAEELLETLIVES---RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKT 461
Query: 283 YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
+ L+ G +A+ ++ MR G+K +T + + + + G ++E+ K + +
Sbjct: 462 FETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 521
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFN 389
+ D+++ + Y K S + ++L+ V KR P+ + N
Sbjct: 522 CK--DIEIAKLEKL---YQKQSSGS-SFNLLQIPVGKRELPTAKAMN 562
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 384 SVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEEL 443
+V S + VL+ + EA + K + G P+ +SY+ ++ + V+ + + +
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMT-VQKQYGSISSI 102
Query: 444 VSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCA 503
VS + QSG LD+ +N ++ + E G+ E A++ + M + TY T +K
Sbjct: 103 VSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGI 162
Query: 504 KGK 506
GK
Sbjct: 163 AGK 165
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 158/342 (46%), Gaps = 42/342 (12%)
Query: 150 VLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCE 206
VL + N A + + ++ + D TYTTM+ + + K+ DEM C+
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL- 265
PN +TYN +IH + ++ AM VFN+ E+ C+PD VT+ TLID ++K G + A+
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 266 ---------------------NCMK-------------EMQEQGCQPNVVTYNALIEGLC 291
NC+ EM +QGC PN+VTYN +++
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 292 LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
+ N A ++ M+ G + + T + +++ G EEA EM + D
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 352 AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
Y ++V+ + K G +A + M+ ++P+V + N++ + K+ EA LL+NM
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 412 PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS-GH 452
+G P+ +Y++++ C GR +L ++ S GH
Sbjct: 636 LALGLRPSLQTYTLLLS--CCTDGRSKLDMGFCGQLMASTGH 675
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 183/384 (47%), Gaps = 21/384 (5%)
Query: 15 IVTTITSLLQ-----TPDSEPLKKFSCYLTPSLVTQVIKNTHNPHHALFFFNWASNPQPN 69
IV ++S+L+ E L+ + QV+K ++ +AL FF W QP
Sbjct: 301 IVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKR-QP- 358
Query: 70 PNNYSHPRSCYAAITDVLLSHSLFSTADSLL----RRSNKLSDFLASKFINAFGDRGDIR 125
+ H Y + L F + LL R + + ++ I+++G +
Sbjct: 359 --GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 126 GAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTM 183
A++ F++ + +G P ++ ++ + +A +++A +Y Q ++ + PD FTY+ +
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY-QRMQAGGLSPDTFTYSVI 475
Query: 184 IRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKS 240
I K G + +A K+F EM C PN +TYN M+ K A++++ R ++
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY-RDMQNAG 534
Query: 241 CRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAK 300
PD VT++ +++ G ++EA EMQ++ P+ Y L++ +GNV++A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 301 RMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEY 360
+ M G++ NV T S+L F V + EA + ++ M++ G+ ++ Y+++++
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-C 653
Query: 361 CKIGKPSEAVSILREMVAKRMKPS 384
C G+ + +++A P+
Sbjct: 654 CTDGRSKLDMGFCGQLMASTGHPA 677
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 142/340 (41%), Gaps = 16/340 (4%)
Query: 185 RGFCKMG-MVESARKVFDEMRCEPNA----------ITYNTMIHGLCKKGEMDGAMRVFN 233
R +C G +VE+ V R P A I L + + A+ F
Sbjct: 293 RQYCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFY 352
Query: 234 RFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
+ D T+TT++ + + + EM GCQPN VTYN LI +
Sbjct: 353 WLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRA 412
Query: 294 GNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAY 353
++EA + ++M+ G K + T +++ G + A+ + M + G+ D Y
Sbjct: 413 NYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 354 SVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPR 413
SVI+N K G A + EMV + P++ ++N + + R + A+ L ++M
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 414 MGCSPNFLSYSIV--ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGD 471
G P+ ++YSIV + G C G ++ E + + M Q D +Y L+ + + G+
Sbjct: 533 AGFEPDKVTYSIVMEVLGHC---GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN 589
Query: 472 EEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
E A + M+ N T + + K+ E Y
Sbjct: 590 VEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 133/298 (44%), Gaps = 3/298 (1%)
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKE 270
TY TM+ L + + ++ + C+P+ VT+ LI Y + + EA+N +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRD-GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 271 MQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGR 330
MQE GC+P+ VTY LI+ +G +D A M +M+ G+ + T + ++ G
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 331 SEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNA 390
A K EMV +G ++ Y+++++ + K A+ + R+M +P +++
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 391 VFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS 450
V VL LEEA + M + P+ Y +++ L G ++ + +ML +
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV-DLWGKAGNVEKAWQWYQAMLHA 603
Query: 451 GHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
G + N LL + A + + +M+ + TY T + C G+ K
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTDGRSK 660
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 158/342 (46%), Gaps = 42/342 (12%)
Query: 150 VLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCE 206
VL + N A + + ++ + D TYTTM+ + + K+ DEM C+
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL- 265
PN +TYN +IH + ++ AM VFN+ E+ C+PD VT+ TLID ++K G + A+
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 266 ---------------------NCMK-------------EMQEQGCQPNVVTYNALIEGLC 291
NC+ EM +QGC PN+VTYN +++
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 292 LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
+ N A ++ M+ G + + T + +++ G EEA EM + D
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 352 AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
Y ++V+ + K G +A + M+ ++P+V + N++ + K+ EA LL+NM
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 412 PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS-GH 452
+G P+ +Y++++ C GR +L ++ S GH
Sbjct: 636 LALGLRPSLQTYTLLLS--CCTDGRSKLDMGFCGQLMASTGH 675
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 183/384 (47%), Gaps = 21/384 (5%)
Query: 15 IVTTITSLLQ-----TPDSEPLKKFSCYLTPSLVTQVIKNTHNPHHALFFFNWASNPQPN 69
IV ++S+L+ E L+ + QV+K ++ +AL FF W QP
Sbjct: 301 IVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKR-QP- 358
Query: 70 PNNYSHPRSCYAAITDVLLSHSLFSTADSLL----RRSNKLSDFLASKFINAFGDRGDIR 125
+ H Y + L F + LL R + + ++ I+++G +
Sbjct: 359 --GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 126 GAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTM 183
A++ F++ + +G P ++ ++ + +A +++A +Y Q ++ + PD FTY+ +
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY-QRMQAGGLSPDTFTYSVI 475
Query: 184 IRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKS 240
I K G + +A K+F EM C PN +TYN M+ K A++++ R ++
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY-RDMQNAG 534
Query: 241 CRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAK 300
PD VT++ +++ G ++EA EMQ++ P+ Y L++ +GNV++A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 301 RMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEY 360
+ M G++ NV T S+L F V + EA + ++ M++ G+ ++ Y+++++
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-C 653
Query: 361 CKIGKPSEAVSILREMVAKRMKPS 384
C G+ + +++A P+
Sbjct: 654 CTDGRSKLDMGFCGQLMASTGHPA 677
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 142/340 (41%), Gaps = 16/340 (4%)
Query: 185 RGFCKMG-MVESARKVFDEMRCEPNA----------ITYNTMIHGLCKKGEMDGAMRVFN 233
R +C G +VE+ V R P A I L + + A+ F
Sbjct: 293 RQYCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFY 352
Query: 234 RFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
+ D T+TT++ + + + EM GCQPN VTYN LI +
Sbjct: 353 WLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRA 412
Query: 294 GNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAY 353
++EA + ++M+ G K + T +++ G + A+ + M + G+ D Y
Sbjct: 413 NYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 354 SVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPR 413
SVI+N K G A + EMV + P++ ++N + + R + A+ L ++M
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 414 MGCSPNFLSYSIV--ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGD 471
G P+ ++YSIV + G C G ++ E + + M Q D +Y L+ + + G+
Sbjct: 533 AGFEPDKVTYSIVMEVLGHC---GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN 589
Query: 472 EEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
E A + M+ N T + + K+ E Y
Sbjct: 590 VEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 133/298 (44%), Gaps = 3/298 (1%)
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKE 270
TY TM+ L + + ++ + C+P+ VT+ LI Y + + EA+N +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRD-GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 271 MQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGR 330
MQE GC+P+ VTY LI+ +G +D A M +M+ G+ + T + ++ G
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 331 SEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNA 390
A K EMV +G ++ Y+++++ + K A+ + R+M +P +++
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 391 VFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS 450
V VL LEEA + M + P+ Y +++ L G ++ + +ML +
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV-DLWGKAGNVEKAWQWYQAMLHA 603
Query: 451 GHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
G + N LL + A + + +M+ + TY T + C G+ K
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTDGRSK 660
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 158/342 (46%), Gaps = 42/342 (12%)
Query: 150 VLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCE 206
VL + N A + + ++ + D TYTTM+ + + K+ DEM C+
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL- 265
PN +TYN +IH + ++ AM VFN+ E+ C+PD VT+ TLID ++K G + A+
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 266 ---------------------NCMK-------------EMQEQGCQPNVVTYNALIEGLC 291
NC+ EM +QGC PN+VTYN +++
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 292 LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
+ N A ++ M+ G + + T + +++ G EEA EM + D
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 352 AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
Y ++V+ + K G +A + M+ ++P+V + N++ + K+ EA LL+NM
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 412 PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS-GH 452
+G P+ +Y++++ C GR +L ++ S GH
Sbjct: 636 LALGLRPSLQTYTLLLS--CCTDGRSKLDMGFCGQLMASTGH 675
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 183/384 (47%), Gaps = 21/384 (5%)
Query: 15 IVTTITSLLQ-----TPDSEPLKKFSCYLTPSLVTQVIKNTHNPHHALFFFNWASNPQPN 69
IV ++S+L+ E L+ + QV+K ++ +AL FF W QP
Sbjct: 301 IVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKR-QP- 358
Query: 70 PNNYSHPRSCYAAITDVLLSHSLFSTADSLL----RRSNKLSDFLASKFINAFGDRGDIR 125
+ H Y + L F + LL R + + ++ I+++G +
Sbjct: 359 --GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 126 GAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTM 183
A++ F++ + +G P ++ ++ + +A +++A +Y Q ++ + PD FTY+ +
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY-QRMQAGGLSPDTFTYSVI 475
Query: 184 IRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKS 240
I K G + +A K+F EM C PN +TYN M+ K A++++ R ++
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY-RDMQNAG 534
Query: 241 CRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAK 300
PD VT++ +++ G ++EA EMQ++ P+ Y L++ +GNV++A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 301 RMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEY 360
+ M G++ NV T S+L F V + EA + ++ M++ G+ ++ Y+++++
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-C 653
Query: 361 CKIGKPSEAVSILREMVAKRMKPS 384
C G+ + +++A P+
Sbjct: 654 CTDGRSKLDMGFCGQLMASTGHPA 677
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 142/340 (41%), Gaps = 16/340 (4%)
Query: 185 RGFCKMG-MVESARKVFDEMRCEPNA----------ITYNTMIHGLCKKGEMDGAMRVFN 233
R +C G +VE+ V R P A I L + + A+ F
Sbjct: 293 RQYCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFY 352
Query: 234 RFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
+ D T+TT++ + + + EM GCQPN VTYN LI +
Sbjct: 353 WLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRA 412
Query: 294 GNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAY 353
++EA + ++M+ G K + T +++ G + A+ + M + G+ D Y
Sbjct: 413 NYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 354 SVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPR 413
SVI+N K G A + EMV + P++ ++N + + R + A+ L ++M
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 414 MGCSPNFLSYSIV--ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGD 471
G P+ ++YSIV + G C G ++ E + + M Q D +Y L+ + + G+
Sbjct: 533 AGFEPDKVTYSIVMEVLGHC---GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN 589
Query: 472 EEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
E A + M+ N T + + K+ E Y
Sbjct: 590 VEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 133/298 (44%), Gaps = 3/298 (1%)
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKE 270
TY TM+ L + + ++ + C+P+ VT+ LI Y + + EA+N +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRD-GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 271 MQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGR 330
MQE GC+P+ VTY LI+ +G +D A M +M+ G+ + T + ++ G
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 331 SEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNA 390
A K EMV +G ++ Y+++++ + K A+ + R+M +P +++
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 391 VFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS 450
V VL LEEA + M + P+ Y +++ L G ++ + +ML +
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV-DLWGKAGNVEKAWQWYQAMLHA 603
Query: 451 GHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
G + N LL + A + + +M+ + TY T + C G+ K
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTDGRSK 660
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 206/478 (43%), Gaps = 49/478 (10%)
Query: 38 LTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTAD 97
LTPSL++Q++K NP AL F A P+ Y H S YA + D+L +
Sbjct: 10 LTPSLLSQILKKQKNPVTALKLFEEAKERFPS---YGHNGSVYATMIDILGKSNRVLEMK 66
Query: 98 SLLRR----SNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVR 153
++ R S + D + + I F G + AI F L
Sbjct: 67 YVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKS-----------------LHE 109
Query: 154 ANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYN 213
N VN + + +D +++E + E ++ + R +C V S N
Sbjct: 110 FNCVNWSLS-FDTLLQEMVKESELEAACHIFRKYCYGWEVNS------------RITALN 156
Query: 214 TMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM-- 271
++ LC+ D A +VF + C PD ++ L+ G+ G+++EA + + M
Sbjct: 157 LLMKVLCQVNRSDLASQVFQEM-NYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 272 --QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG 329
++G ++V Y L++ LC +G VD+A ++ K+ KG+K + G
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHW--E 273
Query: 330 RSEEAIKHMKEMVS----RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSV 385
S E I+ +K +++ RG + +YS + + + GK E +L M +K +P+
Sbjct: 274 SSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTP 333
Query: 386 SSFNAVFRVLVAERKLEEAVLLL-KNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELV 444
+ A + L KL+EAV ++ K M + C P Y+++I GLC M+ V L
Sbjct: 334 FIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLK 393
Query: 445 SSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELC 502
Q + Y L+ G C DG A + + +M+ KS +TY +K LC
Sbjct: 394 KMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC 451
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 183/400 (45%), Gaps = 21/400 (5%)
Query: 127 AIHWFHKAKASGPCALSCNAV----LGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTT 182
A+ F +AK P +V + +L ++NRV K + +++ KE E + +
Sbjct: 28 ALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERM-KEDSCECKDSVFAS 86
Query: 183 MIRGFCKMGMVESARKVFD---EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESK 239
+IR F + G +E A +F E C +++++T++ + K+ E++ A +F ++
Sbjct: 87 VIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGW 146
Query: 240 SCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEA 299
+ L+ + A +EM QGC P+ +Y L++G CL G ++EA
Sbjct: 147 EVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEA 206
Query: 300 KRMMSKMRL----KGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSV 355
++ M KG +++ +L C G ++AI+ + +++ +G+ + Y
Sbjct: 207 THLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHH 266
Query: 356 IVNEYCKIGKPSEAVS----ILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
I E SE + +L E + + P + S++A+ L E KL E +L M
Sbjct: 267 I--EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAM 324
Query: 412 PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDAT-MYNCLLGGYCEDG 470
G P Y + LC+ G+++ +++ + GH L +YN L+ G C+DG
Sbjct: 325 RSKGFEPTPFIYGAKVKALCRA-GKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 471 DEEMALKTVYDMIDK-SFLFNKDTYCTFVKELCAKGKVKE 509
A+ + M + S + N++TY T V LC G+ E
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLE 423
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 10/212 (4%)
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDEMRC---EPNAITYNTMIHGLCKKGEMDGAMRV 231
P + +Y+ M + G + +V MR EP Y + LC+ G++ A+ V
Sbjct: 296 PCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSV 355
Query: 232 FNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQ-GCQPNVVTYNALIEGL 290
N+ C P V + LI G G+ EA+ +K+M +Q C N TY L++GL
Sbjct: 356 INKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGL 415
Query: 291 CLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDV 350
C G EA ++M +M +K V T M+KG C + R EA+ ++EMVS+ M +
Sbjct: 416 CRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPES 475
Query: 351 KAYSVIVNE--YCKIGKPSEAVSILREMVAKR 380
+ + +C I + V IL +++ +
Sbjct: 476 SVWKALAESVCFCAI----DVVEILEHLISSK 503
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 15/291 (5%)
Query: 114 FINAFGDRGDIRGAIH------WFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQV 167
+ F G + A H W K SG + +L L A V+ A I ++
Sbjct: 193 LMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKI 252
Query: 168 VKEALVEPDVFTYTTMIRGFCKMGM--VESARKVFDEMRCE---PNAITYNTMIHGLCKK 222
+++ L P Y + G + +E +++ E P +Y+ M L ++
Sbjct: 253 LRKGLKAPKR-CYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEE 311
Query: 223 GEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM-KEMQEQGCQPNVV 281
G++ V SK P + + + G+++EA++ + KEM + C P V
Sbjct: 312 GKLVEGEEVLLAM-RSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVG 370
Query: 282 TYNALIEGLCLSGNVDEAKRMMSKMRLK-GIKDNVATNTSMLKGFCMVGRSEEAIKHMKE 340
YN LI+GLC G EA + KM + N T +++ G C G+ EA + M+E
Sbjct: 371 VYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEE 430
Query: 341 MVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAV 391
M+ + V+ Y +++ C + + EAV L EMV++ M P S + A+
Sbjct: 431 MLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 206/478 (43%), Gaps = 49/478 (10%)
Query: 38 LTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTAD 97
LTPSL++Q++K NP AL F A P+ Y H S YA + D+L +
Sbjct: 10 LTPSLLSQILKKQKNPVTALKLFEEAKERFPS---YGHNGSVYATMIDILGKSNRVLEMK 66
Query: 98 SLLRR----SNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVR 153
++ R S + D + + I F G + AI F L
Sbjct: 67 YVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKS-----------------LHE 109
Query: 154 ANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYN 213
N VN + + +D +++E + E ++ + R +C V S N
Sbjct: 110 FNCVNWSLS-FDTLLQEMVKESELEAACHIFRKYCYGWEVNS------------RITALN 156
Query: 214 TMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM-- 271
++ LC+ D A +VF + C PD ++ L+ G+ G+++EA + + M
Sbjct: 157 LLMKVLCQVNRSDLASQVFQEM-NYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 272 --QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG 329
++G ++V Y L++ LC +G VD+A ++ K+ KG+K + G
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHW--E 273
Query: 330 RSEEAIKHMKEMVS----RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSV 385
S E I+ +K +++ RG + +YS + + + GK E +L M +K +P+
Sbjct: 274 SSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTP 333
Query: 386 SSFNAVFRVLVAERKLEEAVLLL-KNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELV 444
+ A + L KL+EAV ++ K M + C P Y+++I GLC M+ V L
Sbjct: 334 FIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLK 393
Query: 445 SSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELC 502
Q + Y L+ G C DG A + + +M+ KS +TY +K LC
Sbjct: 394 KMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC 451
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 183/400 (45%), Gaps = 21/400 (5%)
Query: 127 AIHWFHKAKASGPCALSCNAV----LGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTT 182
A+ F +AK P +V + +L ++NRV K + +++ KE E + +
Sbjct: 28 ALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERM-KEDSCECKDSVFAS 86
Query: 183 MIRGFCKMGMVESARKVFD---EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESK 239
+IR F + G +E A +F E C +++++T++ + K+ E++ A +F ++
Sbjct: 87 VIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGW 146
Query: 240 SCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEA 299
+ L+ + A +EM QGC P+ +Y L++G CL G ++EA
Sbjct: 147 EVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEA 206
Query: 300 KRMMSKMRL----KGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSV 355
++ M KG +++ +L C G ++AI+ + +++ +G+ + Y
Sbjct: 207 THLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHH 266
Query: 356 IVNEYCKIGKPSEAVS----ILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
I E SE + +L E + + P + S++A+ L E KL E +L M
Sbjct: 267 I--EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAM 324
Query: 412 PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDAT-MYNCLLGGYCEDG 470
G P Y + LC+ G+++ +++ + GH L +YN L+ G C+DG
Sbjct: 325 RSKGFEPTPFIYGAKVKALCRA-GKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 471 DEEMALKTVYDMIDK-SFLFNKDTYCTFVKELCAKGKVKE 509
A+ + M + S + N++TY T V LC G+ E
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLE 423
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 10/212 (4%)
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDEMRC---EPNAITYNTMIHGLCKKGEMDGAMRV 231
P + +Y+ M + G + +V MR EP Y + LC+ G++ A+ V
Sbjct: 296 PCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSV 355
Query: 232 FNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQ-GCQPNVVTYNALIEGL 290
N+ C P V + LI G G+ EA+ +K+M +Q C N TY L++GL
Sbjct: 356 INKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGL 415
Query: 291 CLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDV 350
C G EA ++M +M +K V T M+KG C + R EA+ ++EMVS+ M +
Sbjct: 416 CRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPES 475
Query: 351 KAYSVIVNE--YCKIGKPSEAVSILREMVAKR 380
+ + +C I + V IL +++ +
Sbjct: 476 SVWKALAESVCFCAI----DVVEILEHLISSK 503
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 15/291 (5%)
Query: 114 FINAFGDRGDIRGAIH------WFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQV 167
+ F G + A H W K SG + +L L A V+ A I ++
Sbjct: 193 LMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKI 252
Query: 168 VKEALVEPDVFTYTTMIRGFCKMGM--VESARKVFDEMRCE---PNAITYNTMIHGLCKK 222
+++ L P Y + G + +E +++ E P +Y+ M L ++
Sbjct: 253 LRKGLKAPKR-CYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEE 311
Query: 223 GEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM-KEMQEQGCQPNVV 281
G++ V SK P + + + G+++EA++ + KEM + C P V
Sbjct: 312 GKLVEGEEVLLAM-RSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVG 370
Query: 282 TYNALIEGLCLSGNVDEAKRMMSKMRLK-GIKDNVATNTSMLKGFCMVGRSEEAIKHMKE 340
YN LI+GLC G EA + KM + N T +++ G C G+ EA + M+E
Sbjct: 371 VYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEE 430
Query: 341 MVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAV 391
M+ + V+ Y +++ C + + EAV L EMV++ M P S + A+
Sbjct: 431 MLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 196/433 (45%), Gaps = 44/433 (10%)
Query: 11 KPSSIVTTITSLLQTPDS------EPLKKFSCYLTPSLVTQVIKNTHNP-HHALFFFNWA 63
KP + + L D+ + L K +T SLV QV++ N + A FF WA
Sbjct: 97 KPVEDIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWA 156
Query: 64 SNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGD 123
N Q Y H Y A+ DVL F L+ NK + SK +
Sbjct: 157 -NSQ---TGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEE---SKLVTLD----- 204
Query: 124 IRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTM 183
+ + V+ L ++ + N A + ++ K V+ D ++
Sbjct: 205 -------------------TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSL 245
Query: 184 IRGFCKMGMVESARKVFDEM--RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSC 241
+ K +E A +VF ++ +P+A T+N +IHG CK + D A R +
Sbjct: 246 MDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDA-RAMMDLMKVTEF 304
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKR 301
PDVVT+T+ ++ Y K G+ + ++EM+E GC PNVVTY ++ L S V EA
Sbjct: 305 TPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALG 364
Query: 302 MMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYC 361
+ KM+ G + +S++ GR ++A + ++M ++G+ DV Y+ +++
Sbjct: 365 VYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAAL 424
Query: 362 KIGKPSEAVSILREMVAKRMK---PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSP 418
+ A+ +L+ M + + P+V ++ + ++ ++K++ +LL +M + S
Sbjct: 425 HHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSI 484
Query: 419 NFLSYSIVICGLC 431
+ +Y ++I GLC
Sbjct: 485 DVSTYILLIRGLC 497
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 8/279 (2%)
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRF---AESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
TYN M+ L K D + N ESK D T + ++ +K G+ +A++
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLD--TMSKVMRRLAKSGKYNKAVDA 225
Query: 268 MKEMQEQ-GCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC 326
EM++ G + + + N+L++ L +++ A + K+ IK + T ++ GFC
Sbjct: 226 FLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIHGFC 284
Query: 327 MVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVS 386
+ ++A M M DV Y+ V YCK G +L EM P+V
Sbjct: 285 KARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVV 344
Query: 387 SFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSS 446
++ V L +++ EA+ + + M GC P+ YS +I L K GR + E+
Sbjct: 345 TYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT-GRFKDAAEIFED 403
Query: 447 MLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDK 485
M G D +YN ++ +EMAL+ + M D+
Sbjct: 404 MTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDE 442
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 178/393 (45%), Gaps = 17/393 (4%)
Query: 28 SEPLKKFSCYLTPSLVTQVIKNTHNPHHALF-FFNWASNPQPNPNNYSHPRSCYAAITDV 86
E L+K + TP LV +V+++ +A+ FF+W N Y H Y V
Sbjct: 632 QEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKR----NGYKHNSEAYNMSIKV 687
Query: 87 LLSHSLFSTADSLL----RRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PC 140
F SL R+ ++ + I +G G AI F + K G P
Sbjct: 688 AGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPS 747
Query: 141 ALSCNAVLGVLVRANRVNLAKAI--YDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
+ + ++ VL N+ +A + ++++ V PD + C++G + A+
Sbjct: 748 SSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFV-PDRELVQDYLGCLCEVGNTKDAKS 806
Query: 199 VFDEMR--CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYS 256
D + P + Y+ I LC+ G+++ A+ F +S D T+ +++ G
Sbjct: 807 CLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSL-LDQYTYGSIVHGLL 865
Query: 257 KRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVA 316
+RG++Q+AL+ + M+E G +P V Y +LI +++ KM + + +V
Sbjct: 866 QRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVV 925
Query: 317 TNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREM 376
T T+M+ G+ +G+ EEA + M RG D K YS +N C+ K +A+ +L EM
Sbjct: 926 TYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEM 985
Query: 377 VAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
+ K + PS +F VF L E K + A + L+
Sbjct: 986 LDKGIAPSTINFRTVFYGLNREGKHDLARIALQ 1018
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 175/431 (40%), Gaps = 59/431 (13%)
Query: 2 AVAVRKATVKPSSIVTTITSLLQTPD-----SEPLKKFSCYLTPSLVTQVIKNTHN-PHH 55
A V V S +V ITS+++ D + L+K S P +V V+K PH
Sbjct: 112 AQKVLHEEVDFSPVVHEITSVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKRCFKVPHL 171
Query: 56 ALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLS---DFLA- 111
A+ FFNW + +SH Y + + D L+ K D
Sbjct: 172 AMRFFNWV----KQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTW 227
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
+ I+ +G I + F K + SG A + N ++ L A R +LA Y ++++
Sbjct: 228 TILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMME 287
Query: 170 EALV------------------------------------EPDVFTYTTMIRGFCKMGMV 193
+ + E D F Y +++ FC G +
Sbjct: 288 KGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGY--LLKSFCVSGKI 345
Query: 194 ESARKVFDEMRCEP---NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTT 250
+ A ++ E++ + +A + ++ GLC+ M A+ + + K D +
Sbjct: 346 KEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRK--LDDSNVYGI 403
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG 310
+I GY ++ +V +AL + +++ G P V TY +++ L ++ + ++M G
Sbjct: 404 IISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENG 463
Query: 311 IKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAV 370
I+ + T+++ G R EA K M +G+ K+YS+ V E C+ + E +
Sbjct: 464 IEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEII 523
Query: 371 SILREMVAKRM 381
I +M A ++
Sbjct: 524 KIFNQMHASKI 534
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 136/315 (43%), Gaps = 8/315 (2%)
Query: 197 RKVFDEMRCEPNAITYNT---MIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLID 253
R +F EMR + IT +T MI + G + A+R F + P TF LI
Sbjct: 698 RSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDM-GLIPSSSTFKCLIT 756
Query: 254 GY-SKRGE-VQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
K+G V+EA +EM G P+ + LC GN +AK + + G
Sbjct: 757 VLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF 816
Query: 312 KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVS 371
VA + ++ C +G+ EEA+ + LD Y IV+ + G +A+
Sbjct: 817 PVTVAYSI-YIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALD 875
Query: 372 ILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLC 431
+ M KP V + ++ E++LE+ + + M C P+ ++Y+ +ICG
Sbjct: 876 KVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYM 935
Query: 432 KVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNK 491
+ G+++ +M + G + D Y+ + C+ E ALK + +M+DK +
Sbjct: 936 SL-GKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPST 994
Query: 492 DTYCTFVKELCAKGK 506
+ T L +GK
Sbjct: 995 INFRTVFYGLNREGK 1009
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 177/411 (43%), Gaps = 49/411 (11%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR 204
N +L + A +++ + ++ K + D+ T+T +I + K + VF++MR
Sbjct: 193 NTMLSIAGEARNLDMVDELVSEMEKNG-CDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 205 ---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAE-----------------SKSCRPD 244
E +A YN MI LC G D A+ + E +KS + D
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 245 VV-----------------TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
VV F L+ + G+++EAL ++E++ + + + L+
Sbjct: 312 VVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILV 371
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMD 347
+GLC + + +A ++ M+ + + D+ ++ G+ +A++ + + G
Sbjct: 372 KGLCRANRMVDALEIVDIMKRRKLDDSNVYGI-IISGYLRQNDVSKALEQFEVIKKSGRP 430
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
V Y+ I+ K+ + + ++ EM+ ++P + AV + + ++ EA +
Sbjct: 431 PRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKV 490
Query: 408 LKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
+M G P + SYSI + LC+ R + ++ + M S + +++ ++
Sbjct: 491 FSSMEEKGIKPTWKSYSIFVKELCR-SSRYDEIIKIFNQMHASKIVIRDDIFSWVISSME 549
Query: 468 EDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLKRCVDN 518
++G++E + + ++ +S ++YC EL GK + + VD+
Sbjct: 550 KNGEKE-KIHLIKEIQKRS-----NSYCD---ELNGSGKAEFSQEEELVDD 591
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 136/305 (44%), Gaps = 14/305 (4%)
Query: 179 TYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLC-KKGE-MDGAMRVFN 233
T+ MI + + G+ A + F EM+ P++ T+ +I LC KKG ++ A R F
Sbjct: 715 TWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFR 774
Query: 234 RFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
S PD + + G ++A +C+ + + G P V Y+ I LC
Sbjct: 775 EMIRSGFV-PDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRI 832
Query: 294 GNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAY 353
G ++EA ++ + + T S++ G G ++A+ + M G V Y
Sbjct: 833 GKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVY 892
Query: 354 SVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPR 413
+ ++ + K + + + ++M + +PSV ++ A+ ++ K+EEA +NM
Sbjct: 893 TSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEE 952
Query: 414 MGCSPNFLSYSIVI---CGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDG 470
G SP+F +YS I C CK + ++L+ E ML G + + G +G
Sbjct: 953 RGTSPDFKTYSKFINCLCQACKSEDALKLLSE----MLDKGIAPSTINFRTVFYGLNREG 1008
Query: 471 DEEMA 475
++A
Sbjct: 1009 KHDLA 1013
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 117/259 (45%), Gaps = 3/259 (1%)
Query: 228 AMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
AMR FN + V + T++ + + + EM++ GC ++ T+ LI
Sbjct: 172 AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILI 231
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMD 347
+ + + + KMR G + + M++ C+ GR + A++ KEM+ +G+
Sbjct: 232 SVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGIT 291
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
++ Y ++++ K K SI +MV +F + + K++EA+ L
Sbjct: 292 FGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALEL 351
Query: 408 LKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
++ + + + I++ GLC+ RM E+V M + + D+ +Y ++ GY
Sbjct: 352 IRELKNKEMCLDAKYFEILVKGLCRA-NRMVDALEIVDIMKRRKLD-DSNVYGIIISGYL 409
Query: 468 EDGDEEMALKTVYDMIDKS 486
D AL+ +++I KS
Sbjct: 410 RQNDVSKALEQ-FEVIKKS 427
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 189/428 (44%), Gaps = 44/428 (10%)
Query: 31 LKKFSCYLTPSLVTQVIKNTHN---PHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVL 87
L +S ++ +LV QV+K N P H FF WA +++H Y + ++L
Sbjct: 59 LVAYSPRVSSNLVEQVLKRCKNLGFPAHR--FFLWARRIP----DFAHSLESYHILVEIL 112
Query: 88 LSHSLFSTADSLLRRSNKLSDFL-ASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNA 146
S F+ L DFL ++ N F +I + W
Sbjct: 113 GSSKQFAL----------LWDFLIEAREYNYF----EISSKVFWI--------------- 143
Query: 147 VLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR-- 204
V RAN + A ++++V E ++P V ++ C V A++ F + +
Sbjct: 144 VFRAYSRANLPSEACRAFNRMV-EFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGF 202
Query: 205 -CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQE 263
P+A TY+ ++ G + + GA +VF+ E ++C D++ + L+D K G+V
Sbjct: 203 GIVPSAKTYSILVRGWARIRDASGARKVFDEMLE-RNCVVDLLAYNALLDALCKSGDVDG 261
Query: 264 ALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLK 323
+EM G +P+ ++ I C +G+V A +++ +M+ + NV T ++K
Sbjct: 262 GYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIK 321
Query: 324 GFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKP 383
C + ++A + EM+ +G + D Y+ I+ +C + + A +L M + P
Sbjct: 322 TLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLP 381
Query: 384 SVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEEL 443
++N V ++L+ + + A + + M P +Y+++I GL + KG+++
Sbjct: 382 DRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRY 441
Query: 444 VSSMLQSG 451
M+ G
Sbjct: 442 FEMMIDEG 449
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 1/260 (0%)
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
F + YS+ EA M E G +P V + L+ LC +V+ A+ K
Sbjct: 140 VFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKA 199
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP 366
+ GI + T + +++G+ + + A K EM+ R +D+ AY+ +++ CK G
Sbjct: 200 KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 259
Query: 367 SEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
+ +EM +KP SF + A +L M R PN +++ +
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHI 319
Query: 427 ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKS 486
I LCK ++ L+ M+Q G N D YN ++ +C+ + A K + M
Sbjct: 320 IKTLCK-NEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK 378
Query: 487 FLFNKDTYCTFVKELCAKGK 506
L ++ TY +K L G+
Sbjct: 379 CLPDRHTYNMVLKLLIRIGR 398
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 8/199 (4%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
FI+A+ D GD+ A + K P + N ++ L + +V+ A + D+++++
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVF---DEMRCEPNAITYNTMIHGLCKKGEMDGA 228
PD +TY +++ C V A K+ D +C P+ TYN ++ L + G D A
Sbjct: 344 -ANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRA 402
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGY-SKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
++ +E K P V T+T +I G K+G+++EA + M ++G P T L
Sbjct: 403 TEIWEGMSERK-FYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLR 461
Query: 288 EGLCLSGNVDEAKRMMSKM 306
L G +D + KM
Sbjct: 462 NRLVGWGQMDVVDVLAGKM 480
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 77/206 (37%), Gaps = 44/206 (21%)
Query: 346 MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAV 405
++ K + ++ Y + PSEA MV +KP V + + L ++ + A
Sbjct: 134 FEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQ 193
Query: 406 LLLKNMPRMGCSPNFLSYSIVICGLCKVK---GRMQLVEELVS----------------- 445
G P+ +YSI++ G +++ G ++ +E++
Sbjct: 194 EFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDAL 253
Query: 446 ----------SMLQSGHNL----DATMYNCLLGGYCEDGDEEMALKTV-----YDMIDKS 486
M Q NL DA + + YC+ GD A K + YD++
Sbjct: 254 CKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNV 313
Query: 487 FLFNKDTYCTFVKELCAKGKVKEEYL 512
+ FN +K LC KV + YL
Sbjct: 314 YTFNH-----IIKTLCKNEKVDDAYL 334
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/501 (22%), Positives = 227/501 (45%), Gaps = 40/501 (7%)
Query: 15 IVTTITSLLQTPDS-EPLK-KFSCY-LTPSLVTQVIKNTHNPH---HALFFFNWASNPQP 68
++ I+ LQ+ D+ E L KFS L+ SL+ ++ NP AL FF+W+S+ +
Sbjct: 49 LIDYISKSLQSNDTWETLSTKFSSIDLSDSLIETILLRFKNPETAKQALSFFHWSSHTR- 107
Query: 69 NPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGA- 127
N H YA +L+ L A +L+ S+ L+ S +++ D +I +
Sbjct: 108 ---NLRHGIKSYALTIHILVKARLLIDARALIE-SSLLNSPPDSDLVDSLLDTYEISSST 163
Query: 128 -------------IHW----FHKAKASGPCALSCNAV-LGVLV----RANRVNLAKAIYD 165
I + F K C + + + L L+ ++ +L IY+
Sbjct: 164 PLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYE 223
Query: 166 QVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKK 222
+ + + P+ T MI+ CK G ++ + D + RC P+ I +++ + ++
Sbjct: 224 CAIDKR-IYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEE 282
Query: 223 GEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVT 282
++ +M + R K+ D + ++ ++ +K G++ A EM ++G N
Sbjct: 283 MRIEESMSLLKRLL-MKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFV 341
Query: 283 YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
Y + C G+V EA+R++S+M G+ T ++ GF G E+ +++ + MV
Sbjct: 342 YTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMV 401
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLE 402
+RG+ A++ +V KI + A IL + + K P +++ + R + ++
Sbjct: 402 TRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDID 461
Query: 403 EAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCL 462
+A+ L M SP F + +I GLC G+++ E+ + M + +A +Y+ L
Sbjct: 462 QALKLFYEMEYRKMSPGFEVFRSLIVGLCTC-GKVEAGEKYLKIMKKRLIEPNADIYDAL 520
Query: 463 LGGYCEDGDEEMALKTVYDMI 483
+ + + GD+ A + +MI
Sbjct: 521 IKAFQKIGDKTNADRVYNEMI 541
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 103/224 (45%), Gaps = 5/224 (2%)
Query: 160 AKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMI 216
A+ ++D++++ + F YT +R C+ G V+ A ++ EM P T+N +I
Sbjct: 323 ARKVFDEMLQRGF-SANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLI 381
Query: 217 HGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGC 276
G + G + + + ++ P F ++ SK V A + + ++G
Sbjct: 382 GGFARFGWEEKGLE-YCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGF 440
Query: 277 QPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIK 336
P+ TY+ LI G ++D+A ++ +M + + S++ G C G+ E K
Sbjct: 441 VPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEK 500
Query: 337 HMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKR 380
++K M R ++ + Y ++ + KIG + A + EM++ R
Sbjct: 501 YLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMISVR 544
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 180/444 (40%), Gaps = 56/444 (12%)
Query: 46 VIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNK 105
V ++T +P FF+++S PNPN Y I+ L S+ + T + S
Sbjct: 18 VSQSTRSPKLIHGFFSFSSKTNPNPNKQQQILIDY--ISKSLQSNDTWETLSTKFS-SID 74
Query: 106 LSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYD 165
LSD L + F + + A+ +FH + + +R + A I+
Sbjct: 75 LSDSLIETILLRFKNPETAKQALSFFHWSSHTRN------------LRHGIKSYALTIHI 122
Query: 166 QVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEM 225
V L++ ++++ +V+S ++ P + ++ ++ K +
Sbjct: 123 LVKARLLIDARALIESSLLNSPPDSDLVDSLLDTYEISSSTP--LVFDLLVQCYAKIRYL 180
Query: 226 DGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQ-EQGCQPNVVTYN 284
+ VF R + V+T TLI YS + ++ + + + E ++ PN +T
Sbjct: 181 ELGFDVFKRLCDC-GFTLSVITLNTLIH-YSSKSKIDDLVWRIYECAIDKRIYPNEITIR 238
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
+I+ LC G + E ++ ++ K +V NTS++ R EE++ +K ++ +
Sbjct: 239 IMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMK 298
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA 404
M +D YS++V K G A + EM+ +
Sbjct: 299 NMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQR------------------------- 333
Query: 405 VLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLG 464
G S N Y++ + C+ KG ++ E L+S M +SG + +NCL+G
Sbjct: 334 ----------GFSANSFVYTVFVRVCCE-KGDVKEAERLLSEMEESGVSPYDETFNCLIG 382
Query: 465 GYCEDGDEEMALKTVYDMIDKSFL 488
G+ G EE L+ M+ + +
Sbjct: 383 GFARFGWEEKGLEYCEVMVTRGLM 406
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 177/408 (43%), Gaps = 56/408 (13%)
Query: 93 FSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGV 150
F+ D++ + + + S I + G +G + A F K SG P ++ ++
Sbjct: 567 FAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINT 626
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEP 207
R R++ A + ++VVK L P FTYT +I GF KMGM+E + D+M P
Sbjct: 627 YARNGRIDEANELVEEVVKHFL-RPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSP 685
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDG------------- 254
N + Y +I KKG+ + +F E+ + D + + TL+ G
Sbjct: 686 NVVLYTALIGHFLKKGDFKFSFTLFGLMGEN-DIKHDHIAYITLLSGLWRAMARKKKRQV 744
Query: 255 ----------------------------YSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
Y + E + +K + PN+ +N +
Sbjct: 745 IVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVK----KSIIPNLYLHNTI 800
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
I G C +G +DEA + M+ +GI N+ T T ++K G E AI +
Sbjct: 801 ITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GTNC 857
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
+ D YS ++ C +P +A++++ EM + P+ S+ + + L R EAV
Sbjct: 858 EPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVK 917
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNL 454
++K+M + P ++++ +I LC+ K +++ L + M+QSG +L
Sbjct: 918 VVKDMAALDIWPRSINHTWLIYILCEEK-KLREARALFAIMVQSGRSL 964
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 168/361 (46%), Gaps = 13/361 (3%)
Query: 153 RANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNA 209
+ N + +A +Y ++V+ + E D + T+I GF K+GM++ R +F +M + N
Sbjct: 284 KDNNMTMAMRLYLRMVERSF-ELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNV 342
Query: 210 ITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK 269
TY+ MI CK+G +D A+R+F S+ +V +T LI G+ K+G + +A++ +
Sbjct: 343 FTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLM 402
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN-VATNTSMLKGFCMV 328
M + G P+ +TY L++ L E K M + L+ I DN N ++ +
Sbjct: 403 RMLDNGIVPDHITYFVLLKML---PKCHELKYAM--VILQSILDNGCGINPPVIDDLGNI 457
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSF 388
E++ + E+ + +L +V+ C A+S + +MV P S+
Sbjct: 458 EVKVESL--LGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSY 515
Query: 389 NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
N+V + L E +E+ L+ + + P+ +Y IV+ LCK R ++ +M
Sbjct: 516 NSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDR-DAAFAIIDAME 574
Query: 449 QSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
+ G +Y+ ++G + G A +T M++ ++ Y + G++
Sbjct: 575 ELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRID 634
Query: 509 E 509
E
Sbjct: 635 E 635
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 159/365 (43%), Gaps = 19/365 (5%)
Query: 147 VLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR-- 204
V+ L + N + A AI D ++E + P V Y+++I K G V A + F +M
Sbjct: 553 VVNELCKKNDRDAAFAIID-AMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLES 611
Query: 205 -CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQE 263
+P+ I Y MI+ + G +D A + + RP T+T LI G+ K G +++
Sbjct: 612 GIQPDEIAYMIMINTYARNGRIDEANELVEEVVK-HFLRPSSFTYTVLISGFVKMGMMEK 670
Query: 264 ALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLK 323
+ +M E G PNVV Y ALI G+ + + M IK + ++L
Sbjct: 671 GCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLS 730
Query: 324 GFCMVGRSEEAIKHMKEMVSRGMD------LDVKAYSVIVNEYCKIGKPSEAVSILREMV 377
G + R+ K + +V G + + K I + G S A+ ++ + V
Sbjct: 731 G---LWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGK-V 786
Query: 378 AKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRM 437
K + P++ N + A +L+EA L++M + G PN ++Y+I L K
Sbjct: 787 KKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTI----LMKSHIEA 842
Query: 438 QLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTF 497
+E + + D MY+ LL G C+ AL + +M NKD+Y
Sbjct: 843 GDIESAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKL 902
Query: 498 VKELC 502
++ LC
Sbjct: 903 LQCLC 907
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 160/350 (45%), Gaps = 29/350 (8%)
Query: 175 PDVFTYTTMIRGFCKMGMVE---SARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRV 231
P F+Y ++I+ + ++E S + E+ P+ TY +++ LCKK + D A +
Sbjct: 510 PLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAI 569
Query: 232 FNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLC 291
+ E RP V ++++I K+G V EA +M E G QP+ + Y +I
Sbjct: 570 IDAM-EELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYA 628
Query: 292 LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
+G +DEA ++ ++ ++ + T T ++ GF +G E+ +++ +M+ G+ +V
Sbjct: 629 RNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVV 688
Query: 352 AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPS----VSSFNAVFRVLVAERKLE----- 402
Y+ ++ + K G + ++ M +K ++ + ++R + ++K +
Sbjct: 689 LYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEP 748
Query: 403 --EAVL--LLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATM 458
E +L L++ P + + +Y M+++ ++ S++ + + +
Sbjct: 749 GKEKLLQRLIRTKPLVSIPSSLGNYG-------SKSFAMEVIGKVKKSIIPNLY-----L 796
Query: 459 YNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
+N ++ GYC G + A + M + + N TY +K G ++
Sbjct: 797 HNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIE 846
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 139/312 (44%), Gaps = 10/312 (3%)
Query: 205 CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEA 264
C P +YN++I L ++ ++ + N E PDV T+ +++ K+ + A
Sbjct: 508 CTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFV-PDVDTYLIVVNELCKKNDRDAA 566
Query: 265 LNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKG 324
+ M+E G +P V Y+++I L G V EA+ +KM GI+ + M+
Sbjct: 567 FAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINT 626
Query: 325 FCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPS 384
+ GR +EA + ++E+V + Y+V+++ + K+G + L +M+ + P+
Sbjct: 627 YARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPN 686
Query: 385 VSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKV----KGRMQLV 440
V + A+ + + + + L M + ++Y ++ GL + K R +V
Sbjct: 687 VVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIV 746
Query: 441 EELVSSMLQSGHNLDATM-YNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
E +LQ + LG Y G + A++ + + KS + N + T +
Sbjct: 747 EPGKEKLLQRLIRTKPLVSIPSSLGNY---GSKSFAMEVI-GKVKKSIIPNLYLHNTIIT 802
Query: 500 ELCAKGKVKEEY 511
CA G++ E Y
Sbjct: 803 GYCAAGRLDEAY 814
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 157/385 (40%), Gaps = 47/385 (12%)
Query: 143 SC-NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
SC A++ L + +A+ Y+Q V + PD +M+ FC + + + FD
Sbjct: 96 SCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMV--FCLVKL-----RRFD 148
Query: 202 EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
E R + I + + +A S++ + + ++D +
Sbjct: 149 EARAHLDRI--------------------IASGYAPSRN------SSSLVVDELCNQDRF 182
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRM------MSKMRLKGIKDNV 315
EA +C ++++E+G + L +GLC G+++EA M M++M L V
Sbjct: 183 LEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLP-----V 237
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
S+ FC G + EA M G +D Y+ ++ EYCK + A+ +
Sbjct: 238 NLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLR 297
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
MV + + FN + + L++ ++ M + G N +Y I+I CK
Sbjct: 298 MVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGN 357
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYC 495
+ V++ + + Y L+ G+ + G + A+ + M+D + + TY
Sbjct: 358 VDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYF 417
Query: 496 TFVKEL--CAKGKVKEEYLKRCVDN 518
+K L C + K L+ +DN
Sbjct: 418 VLLKMLPKCHELKYAMVILQSILDN 442
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 165/435 (37%), Gaps = 69/435 (15%)
Query: 99 LLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANR 156
++ RS +L + + I+ F G + F + G + + ++G +
Sbjct: 298 MVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGN 357
Query: 157 VNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYN 213
V+ A ++ + +V YT +I GF K G ++ A + M P+ ITY
Sbjct: 358 VDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYF 417
Query: 214 TMIHGLCKKGEMDGAMRVFNRFAESK-SCRPDVVTFTTLIDGY--SKRGEVQE------- 263
++ L K E+ AM + ++ P V+ I+ S GE+
Sbjct: 418 VLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAA 477
Query: 264 ------------------ALNCMKEMQEQGCQPNVVTYNALIE----------------- 288
AL+ +++M GC P +YN++I+
Sbjct: 478 VGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNI 537
Query: 289 ------------------GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGR 330
LC + D A ++ M G++ VA +S++ GR
Sbjct: 538 IQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGR 597
Query: 331 SEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNA 390
EA + +M+ G+ D AY +++N Y + G+ EA ++ E+V ++PS ++
Sbjct: 598 VVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTV 657
Query: 391 VFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS 450
+ V +E+ L M G SPN + Y+ +I K KG + L M ++
Sbjct: 658 LISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLK-KGDFKFSFTLFGLMGEN 716
Query: 451 GHNLDATMYNCLLGG 465
D Y LL G
Sbjct: 717 DIKHDHIAYITLLSG 731
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 214 TMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQE 273
++I L ++G +D A V R +IDG S + EA +
Sbjct: 48 SLIVKLGRRGLLDSAREVIRR----------------VIDGSS---SISEAALVADFAVD 88
Query: 274 QGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKG--FCMVG-- 329
G + + Y ALI L G A+ ++ + I + + ++S+L FC+V
Sbjct: 89 NGIELDSSCYGALIRKLTEMGQPGVAETFYNQ---RVIGNGIVPDSSVLDSMVFCLVKLR 145
Query: 330 RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFN 389
R +EA H+ +++ G + S++V+E C + EA ++ + +
Sbjct: 146 RFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCK 205
Query: 390 AVFRVLVAERKLEEAVLLLK---NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSS 446
+F+ L L EA+ +L M RM N L S+ C CK +G E L
Sbjct: 206 RLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVN-LYKSLFYC-FCK-RGCAAEAEALFDH 262
Query: 447 MLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
M G+ +D MY CL+ YC+D + MA++ M+++SF + + T +
Sbjct: 263 MEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLI 314
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/310 (18%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 126 GAIHWFHKAKASG----PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYT 181
G F+ + G P + ++++ LV+ R + A+A D+++ P + +
Sbjct: 112 GVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYA-PSRNSSS 170
Query: 182 TMIRGFCKMGMVESARKVFDEMRCEPNAITY---NTMIHGLCKKGEMDGAMRVFNRFAES 238
++ C A F++++ + + + GLC G ++ A+ + +
Sbjct: 171 LVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGM 230
Query: 239 KSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDE 298
V + +L + KRG EA M+ G + V Y L++ C N+
Sbjct: 231 TRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTM 290
Query: 299 AKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVN 358
A R+ +M + + + +++ GF +G ++ +M+ +G+ +V Y +++
Sbjct: 291 AMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIG 350
Query: 359 EYCKIGKPSEAVSI-LREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCS 417
YCK G A+ + + ++ + +V + + + +++AV LL M G
Sbjct: 351 SYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIV 410
Query: 418 PNFLSYSIVI 427
P+ ++Y +++
Sbjct: 411 PDHITYFVLL 420
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 204/464 (43%), Gaps = 32/464 (6%)
Query: 16 VTTITSLLQTPDSEPLKKFSCYLTPSLVTQVIKNTH--------NPHHALFFFNWASNPQ 67
++TI++LL+ D P L + + ++ H +P F WA +
Sbjct: 70 LSTISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWA---E 126
Query: 68 PNPNNYSHPRSCYAAITDVLLSHSLFSTADSLL---RRSNKLSDFLASK----FINAFGD 120
P P S + ++ + L F A SL+ RS++ S+ +++ I +
Sbjct: 127 MKPGFTLSP-SLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYAR 185
Query: 121 RGDIRGAIHWFHKAKASGPCALSCN------AVLGVLVRANRVNLAKAIYDQV--VKEAL 172
G ++ AI F A++ P S +L L + V A +++ ++
Sbjct: 186 AGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSN 245
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMRC---EPNAITYNTMIHGLCKKGEMDGAM 229
P V + ++ G+ + ++ A K+++EM+ +P +TY T+I G C+ + AM
Sbjct: 246 WVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAM 305
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
V ++ + + F +IDG + G + EAL M+ P +VTYN+L++
Sbjct: 306 EVLEEMKMAE-MEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKN 364
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
C +G++ A +++ M +G+ T K F ++EE + +++ G D
Sbjct: 365 FCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPD 424
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
Y +I+ C+ GK S A+ + +EM + + P + + + +L LEEA
Sbjct: 425 RLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFD 484
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHN 453
N R G P ++++ ++ GL + KG + + L S M H+
Sbjct: 485 NAVRRGIIPQYITFKMIDNGL-RSKGMSDMAKRLSSLMSSLPHS 527
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 161/380 (42%), Gaps = 51/380 (13%)
Query: 145 NAVLGVLVRANRVNLAKA-IYDQVVKEA---LVEPDVFTYTTMIRGFCKMGMVESARKVF 200
++V+ L +A +A + ++D+V + LV D T+ +IR + + GMV+ A + F
Sbjct: 139 DSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSAD--TFIVLIRRYARAGMVQQAIRAF 196
Query: 201 DEMRC-EP------NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCR--PDVVTFTTL 251
+ R EP ++ LCK+G + A R + P V F L
Sbjct: 197 EFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNIL 256
Query: 252 IDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
++G+ + ++++A +EM+ +P VVTY LIEG C V A ++ +M++ +
Sbjct: 257 LNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEM 316
Query: 312 KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVS 371
+ N ++ G GR EA+ M+ + Y+ +V +CK G A
Sbjct: 317 EINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASK 376
Query: 372 ILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLC 431
IL+ M+ + + P+ +++N F+ K EE +
Sbjct: 377 ILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGM-------------------------- 410
Query: 432 KVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNK 491
L ++++GH+ D Y+ +L CEDG +A++ +M ++ +
Sbjct: 411 ----------NLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDL 460
Query: 492 DTYCTFVKELCAKGKVKEEY 511
T + LC ++E +
Sbjct: 461 LTTTMLIHLLCRLEMLEEAF 480
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 142/317 (44%), Gaps = 33/317 (10%)
Query: 181 TTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAE 237
+ +++ +CKM M A + F E R + + YN L K G ++ A + +
Sbjct: 357 SLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKD 416
Query: 238 SKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVD 297
+ PDV+ +TTLIDGY +G+V +AL+ + EM G P+++TYN L+ GL +G+ +
Sbjct: 417 -RGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEE 475
Query: 298 EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR------------- 344
E + +M+ +G K N TN+ +++G C + +EA + +
Sbjct: 476 EVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYC 535
Query: 345 GMDLDVKAYSVIVN-EY--------------CKIGKPSEAVSILREMVAKRMKPSVSSFN 389
L KAY V EY C G +A +L++M A R++P S
Sbjct: 536 EAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCG 595
Query: 390 AVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
+ + EA +L M G P+ +Y+I+I C++ +Q E L M Q
Sbjct: 596 KMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRL-NELQKAESLFEDMKQ 654
Query: 450 SGHNLDATMYNCLLGGY 466
G D Y LL Y
Sbjct: 655 RGIKPDVVTYTVLLDRY 671
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 163/379 (43%), Gaps = 52/379 (13%)
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVF 232
D Y K+G VE A ++ EM+ P+ I Y T+I G C +G++ A+ +
Sbjct: 387 DRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLI 446
Query: 233 NRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCL 292
+ PD++T+ L+ G ++ G +E L + M+ +G +PN VT + +IEGLC
Sbjct: 447 DEMI-GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCF 505
Query: 293 SGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEM----------- 341
+ V EA+ S + K ++ S +KG+C G S++A K +
Sbjct: 506 ARKVKEAEDFFSSLEQKCPENK----ASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIK 561
Query: 342 ----------VSRGMDL--DVKAYSV---------IVNEYCKIGKPSEAVSILREMVAKR 380
+ + D+ + AY V ++ +CK+ EA + MV +
Sbjct: 562 LFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERG 621
Query: 381 MKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI----------CGL 430
+ P + ++ + +L++A L ++M + G P+ ++Y++++
Sbjct: 622 LIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHET 681
Query: 431 CKVKGRM--QLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFL 488
C V+G + + E++ +G LD Y L+ C+ + E A + MID
Sbjct: 682 CSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLE 741
Query: 489 FNKDTYCTFVKELCAKGKV 507
+ Y T + KG +
Sbjct: 742 PDMVAYTTLISSYFRKGYI 760
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 204/461 (44%), Gaps = 41/461 (8%)
Query: 38 LTPSLVTQVIKNTHN-PHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTA 96
LT + +++ +T + P+ AL F +PN + YA + +L + L
Sbjct: 54 LTQHGLQRLLNSTRDDPNLALSFLRQLKEHGVSPN-----VNAYATLVRILTTWGLDIKL 108
Query: 97 DSLLRR--SNKLSDFLASKFINAFGDRGD----------IRGAI-------HWFHKA--- 134
DS+L N+ F I G++ + + GA+ F +A
Sbjct: 109 DSVLVELIKNEERGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDV 168
Query: 135 ---KASGPCAL---SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFC 188
C + +CN ++ + ++ + ++ Q+ + L + +TY +++ C
Sbjct: 169 LFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANE-YTYAIVVKALC 227
Query: 189 KMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVV-- 246
+ G +E A + E + Y T I+GLC GE + A+ + + K D +
Sbjct: 228 RKGNLEEAAMLLIE---NESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRA 284
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
++ G+ +++ A + + EM+E G +V A+I+ C + N+ EA + KM
Sbjct: 285 VLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKM 344
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP 366
KG+K N + +L+ +C + EA++ KE + LD Y+V + K+G+
Sbjct: 345 LGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRV 404
Query: 367 SEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
EA +L+EM + + P V ++ + + K+ +A+ L+ M G SP+ ++Y+++
Sbjct: 405 EEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVL 464
Query: 427 ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
+ GL + G + V E+ M G +A + ++ G C
Sbjct: 465 VSGLAR-NGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC 504
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/501 (21%), Positives = 197/501 (39%), Gaps = 92/501 (18%)
Query: 81 AAITDVLLSHSLFSTADSLLRRSNKLS---DFLASKFI-NAFGDRGDIRGAIHWFHKAKA 136
A+ +S +F A +L +S +L D A F+ N + G I + F + K
Sbjct: 150 GALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQ 209
Query: 137 SGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESA 196
G CA + V + NL +A + E+ VF Y T I G C G E A
Sbjct: 210 LGLCANEYTYAIVVKALCRKGNLEEAAMLLIENES-----VFGYKTFINGLCVTGETEKA 264
Query: 197 ---------RKVF--DEMRCEPNAITYNTMIHGLCKKGEMDGA----------------- 228
RK D++R ++ G C + +M A
Sbjct: 265 VALILELIDRKYLAGDDLRA-----VLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVY 319
Query: 229 --MRVFNRFAES---------------KSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM 271
+ V +R+ ++ K + + V + ++ Y K EAL KE
Sbjct: 320 ACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEF 379
Query: 272 QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRS 331
++ + V YN + L G V+EA ++ +M+ +GI +V T+++ G+C+ G+
Sbjct: 380 RDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKV 439
Query: 332 EEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAV 391
+A+ + EM+ GM D+ Y+V+V+ + G E + I M A+ KP+ + + +
Sbjct: 440 VDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVI 499
Query: 392 FRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVIC--GLCK----------------- 432
L RK++EA ++ + C N S+ C GL K
Sbjct: 500 IEGLCFARKVKEAEDFFSSLEQ-KCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSV 558
Query: 433 ---------VKGRMQLVEELVSSMLQSGHNLDATMYNC--LLGGYCEDGDEEMALKTVYD 481
++G ++ +++ M S + ++ C ++G +C+ + A
Sbjct: 559 YIKLFFSLCIEGYLEKAHDVLKKM--SAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDT 616
Query: 482 MIDKSFLFNKDTYCTFVKELC 502
M+++ + + TY + C
Sbjct: 617 MVERGLIPDLFTYTIMIHTYC 637
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 170/429 (39%), Gaps = 67/429 (15%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
+A G + A + K G P ++ ++ +V A + D+++ +
Sbjct: 395 FDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGM 454
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAM 229
PD+ TY ++ G + G E ++++ M+ E PNA+T + +I GLC ++ A
Sbjct: 455 -SPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAE 513
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGY-----SKR-------------------------- 258
F+ + C + +F + GY SK+
Sbjct: 514 DFFSSL--EQKCPENKASF---VKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCI 568
Query: 259 -GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVAT 317
G +++A + +K+M +P +I C NV EA+ + M +G+ ++ T
Sbjct: 569 EGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFT 628
Query: 318 NTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMV 377
T M+ +C + ++A ++M RG+ DV Y+V+++ Y K+ ++ V
Sbjct: 629 YTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEV 688
Query: 378 AKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRM 437
KR V L+ G + + Y+++I CK+ +
Sbjct: 689 GKRKASEV----------------------LREFSAAGIGLDVVCYTVLIDRQCKMNN-L 725
Query: 438 QLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTF 497
+ EL M+ SG D Y L+ Y G +MA+ V ++ K + +++
Sbjct: 726 EQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTEL-SKKYNIPSESFEAA 784
Query: 498 VKELCAKGK 506
VK K K
Sbjct: 785 VKSAALKAK 793
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 178/449 (39%), Gaps = 105/449 (23%)
Query: 158 NLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM-RCEPNAITYNTMI 216
NLA + Q+ KE V P+V Y T++R G+ V E+ + E T +I
Sbjct: 71 NLALSFLRQL-KEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLI 129
Query: 217 HGLCKKGE----------MDGAM-----------RVFNRFAESK--SCRPDVVTFTTLID 253
+ ++ E + GA+ + +SK C D+ L++
Sbjct: 130 EVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMN 189
Query: 254 GYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKD 313
++ G++ + K++++ G N TY +++ LC GN++EA ++ + +
Sbjct: 190 RMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE------NE 243
Query: 314 NVATNTSMLKGFCMVGRSEEAIKHMKEMVSR----------------------------- 344
+V + + G C+ G +E+A+ + E++ R
Sbjct: 244 SVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAE 303
Query: 345 ---------GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPS---VS------ 386
G LDV A +++ YCK EA+ L +M+ K +K + VS
Sbjct: 304 SVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCY 363
Query: 387 --------------------------SFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNF 420
+N F L ++EEA LL+ M G P+
Sbjct: 364 CKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDV 423
Query: 421 LSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVY 480
++Y+ +I G C ++G++ +L+ M+ +G + D YN L+ G +G EE L+
Sbjct: 424 INYTTLIDGYC-LQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYE 482
Query: 481 DMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
M + N T ++ LC KVKE
Sbjct: 483 RMKAEGPKPNAVTNSVIIEGLCFARKVKE 511
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 111/258 (43%), Gaps = 27/258 (10%)
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
S R + AL+ +++++E G PNV Y L+ L G ++L + +
Sbjct: 65 STRDDPNLALSFLRQLKEHGVSPNVNAYATLVRILTTWG---------LDIKLDSVLVEL 115
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
N +GF ++ E I E R L ++ +V Y +G EA +L +
Sbjct: 116 IKNEE--RGFTVMDLI-EVIGEQAEEKKRSFVL-IRVSGALVKAYVSLGMFDEATDVLFQ 171
Query: 376 MVAKRMK--PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKV 433
+KR+ + + N + + K+ + L K + ++G N +Y+IV+ LC+
Sbjct: 172 --SKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCR- 228
Query: 434 KGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDT 493
KG + EE +++ N Y + G C G+ E A+ + ++ID+ +L D
Sbjct: 229 KGNL---EEAAMLLIE---NESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDL 282
Query: 494 YCTF---VKELCAKGKVK 508
V+ C + K+K
Sbjct: 283 RAVLGMVVRGFCNEMKMK 300
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 167/344 (48%), Gaps = 18/344 (5%)
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVF 232
D + +++G+ K+G+VE +VF E+ + +T N +++GL K M+ +V+
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 233 NRFAESKSCR----PDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
S CR P+ TF L + + +E + +++M+E+G +P++VTYN L+
Sbjct: 225 -----SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVS 279
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
C G + EA + M + + ++ T TS++KG C GR EA + MV RG+
Sbjct: 280 SYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKP 339
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
D +Y+ ++ YCK G ++ +L EM+ + P + + V E +L AV +
Sbjct: 340 DCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFV 399
Query: 409 KNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML-QSGHNLDATMYNCLLGGY- 466
+ R+ F +I LC+ +G+ + L+ ++ + GH YN L+
Sbjct: 400 VELRRLKVDIPFEVCDFLIVSLCQ-EGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLS 458
Query: 467 -CEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
C+ +E + LK + +++ + + TY + LC G+ +E
Sbjct: 459 RCDAIEEALVLKG--KLKNQNQVLDAKTYRALIGCLCRIGRNRE 500
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 132/274 (48%), Gaps = 8/274 (2%)
Query: 116 NAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALV 173
N F + + R + K + G P ++ N ++ R R+ A +Y + + +V
Sbjct: 244 NVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVV 303
Query: 174 EPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMR 230
PD+ TYT++I+G CK G V A + F M +P+ ++YNT+I+ CK+G M + +
Sbjct: 304 -PDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKK 362
Query: 231 VFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGL 290
+ + S PD T +++G+ + G + A+N + E++ + LI L
Sbjct: 363 LLHEML-GNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSL 421
Query: 291 CLSGNVDEAKRMMSKM-RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
C G AK ++ ++ +G + T ++++ EEA+ ++ ++ LD
Sbjct: 422 CQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLD 481
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKP 383
K Y ++ C+IG+ EA S++ EM +KP
Sbjct: 482 AKTYRALIGCLCRIGRNREAESLMAEMFDSEVKP 515
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 148/339 (43%), Gaps = 45/339 (13%)
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAM 229
+ P+ +T+ + FC ++M EP+ +TYNT++ C++G + A
Sbjct: 232 IHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAF 291
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
++ + + PD+VT+T+LI G K G V+EA M ++G +P+ ++YN LI
Sbjct: 292 YLY-KIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA 350
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
C G + ++K+++ +M + + T +++GF GR A+ + E+ +D+
Sbjct: 351 YCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIP 410
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKR---MKPSVSSFNAVFRVLVAERKLEEAVL 406
+ ++ C+ GKP A +L ++ + KP ++N + L +EEA++
Sbjct: 411 FEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE--TYNNLIESLSRCDAIEEALV 468
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATM-------- 458
L + + +Y +I LC++ GR + E L++ M S D+ +
Sbjct: 469 LKGKLKNQNQVLDAKTYRALIGCLCRI-GRNREAESLMAEMFDSEVKPDSFICGALVYGY 527
Query: 459 ---------------------------YNCLLGGYCEDG 470
YN L+ CE G
Sbjct: 528 CKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETG 566
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 142/299 (47%), Gaps = 18/299 (6%)
Query: 215 MIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQ 274
+I KK E+D RV + + C D V F L+ GY K G V+E +E+ +
Sbjct: 139 LIELTSKKEEVD-VFRVL--VSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDS 195
Query: 275 GCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEA 334
G +VVT N L+ GL +++ ++ S M GI N T + FC E
Sbjct: 196 GFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREV 255
Query: 335 IKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRV 394
+++M G + D+ Y+ +V+ YC+ G+ EA + + M +R+ P + ++ ++ +
Sbjct: 256 DDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKG 315
Query: 395 LVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNL 454
L + ++ EA M G P+ +SY+ +I CK +G MQ ++L+ ML G+++
Sbjct: 316 LCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCK-EGMMQQSKKLLHEML--GNSV 372
Query: 455 DATMYNC--LLGGYCEDGDEEMALKTVYDM----IDKSFLFNKDTYCTF-VKELCAKGK 506
+ C ++ G+ +G A+ V ++ +D F C F + LC +GK
Sbjct: 373 VPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPF-----EVCDFLIVSLCQEGK 426
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 144/340 (42%), Gaps = 50/340 (14%)
Query: 69 NPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLS---DFLA-SKFINAFGDRGDI 124
+PN Y+ + +T+V + S F D L + + D + + ++++ RG +
Sbjct: 233 HPNTYT-----FNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRL 287
Query: 125 RGAIHWFH--KAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTT 182
+ A + + + P ++ +++ L + RV A + ++V ++PD +Y T
Sbjct: 288 KEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG-IKPDCMSYNT 346
Query: 183 MIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHG--------------------- 218
+I +CK GM++ ++K+ EM P+ T ++ G
Sbjct: 347 LIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLK 406
Query: 219 --------------LCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEA 264
LC++G+ A + +R E + T+ LI+ S+ ++EA
Sbjct: 407 VDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEA 466
Query: 265 LNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKG 324
L +++ Q + TY ALI LC G EA+ +M++M +K + +++ G
Sbjct: 467 LVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYG 526
Query: 325 FCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIG 364
+C ++A + + D ++Y+ +V C+ G
Sbjct: 527 YCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETG 566
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 3/173 (1%)
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
+ D + ++V Y K+G E + RE++ SV + N + L+ +E+
Sbjct: 163 NWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQ 222
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGY 466
+ M R+G PN +++I+ C + V++ + M + G D YN L+ Y
Sbjct: 223 VYSVMCRVGIHPNTYTFNILTNVFCN-DSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 467 CEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY--LKRCVD 517
C G + A M + + + TY + +K LC G+V+E + R VD
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVD 334
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 109/273 (39%), Gaps = 41/273 (15%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
+ I G +R A FH+ G P +S N ++ + + +K + +++
Sbjct: 310 TSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLG 369
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNT---MIHGLCKKGEMD 226
++V PD FT ++ GF + G + SA E+R I + +I LC++G+
Sbjct: 370 NSVV-PDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPF 428
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL--------------------- 265
A + +R E + T+ LI+ S+ ++EAL
Sbjct: 429 AAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRAL 488
Query: 266 --------------NCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
+ M EM + +P+ AL+ G C + D+A+R++S ++
Sbjct: 489 IGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFR 548
Query: 312 KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
+ + S++K C G + ++E + R
Sbjct: 549 IFDPESYNSLVKAVCETGCGYKKALELQERMQR 581
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 175/398 (43%), Gaps = 45/398 (11%)
Query: 37 YLTPSLVTQVIKNTHNPHHALFFFNW-ASNPQPNPNNYSHPRSCYAAITDVLLSHSLFST 95
+ P +++K+ +N +L+FF W SN P S + LL
Sbjct: 77 FADPLFFGELLKSQNNVLFSLWFFRWLCSNYDYTPGPVS-----LNILFGALLDGKAVKA 131
Query: 96 ADSLLRRSN-KLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLV 152
A S L + K L +++ + G + AI ++ K G ++CN+VL +
Sbjct: 132 AKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCL 191
Query: 153 RANRVN---------------------LAKAIYD--------QVVKEAL---VEPDVFTY 180
+A +++ L +A+ D +++K+ L ++P + Y
Sbjct: 192 KARKLDRFWELHKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVY 251
Query: 181 TTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAE 237
+I GFC++G +V M P+ Y +I GLC + A +F +
Sbjct: 252 AKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKD 311
Query: 238 SKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVD 297
K PD V +TT+I G+ ++G + A EM ++G +PN YN +I G G +
Sbjct: 312 -KGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEIS 370
Query: 298 EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIV 357
+ ++M G + + +M+KGFC G+S+EA + K M G+ + Y+ ++
Sbjct: 371 LVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALI 430
Query: 358 NEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVL 395
+CK K + + + +E+ A +KPS ++ A+ R L
Sbjct: 431 KGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 147/355 (41%), Gaps = 15/355 (4%)
Query: 130 WFHKAKASG----PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIR 185
WF + S P +S N + G L+ V AK+ D +P+ ++
Sbjct: 98 WFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFLDTTG----FKPEPTLLEQYVK 153
Query: 186 GFCKMGMVESARKVFD---EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCR 242
+ G+VE A +V++ +M + +T N+++ G K ++D + ES+
Sbjct: 154 CLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF-- 211
Query: 243 PDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRM 302
D LI G+V E +K+ +QG P Y LI G C GN +
Sbjct: 212 -DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEV 270
Query: 303 MSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCK 362
+ M ++ ++KG CM + EA K + +G D Y+ ++ +C+
Sbjct: 271 LHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCE 330
Query: 363 IGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLS 422
G A + EM+ K M+P+ ++N + ++ M R G LS
Sbjct: 331 KGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLS 390
Query: 423 YSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALK 477
+ +I G C G+ E+ +M ++G +A YN L+ G+C++ E LK
Sbjct: 391 CNTMIKGFCS-HGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLK 444
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 155/341 (45%), Gaps = 11/341 (3%)
Query: 178 FTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNR 234
F Y MI C+ A ++ M+ + P +YN +IHGLCK G G MR +
Sbjct: 308 FAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDG---GCMRAYQL 364
Query: 235 FAESKSCR--PDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCL 292
E P T+ L++ K + +A N ++ M + YN + GLC+
Sbjct: 365 LEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCV 424
Query: 293 SGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVS-RGMDLDVK 351
N E ++ M + + T +++ G C +GR ++A+K + +M++ + D
Sbjct: 425 MDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAV 484
Query: 352 AYSVIVNEYCKIGKPSEAVSIL-REMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKN 410
+ ++ G+ EA+ +L R M ++KP V ++NAV R L K +EA+ +
Sbjct: 485 TLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQ 544
Query: 411 MPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDG 470
+ + + + +Y+I+I GLC V ++ + ++ ++ DA +Y L G C+ G
Sbjct: 545 LEKASVTADSTTYAIIIDGLC-VTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSG 603
Query: 471 DEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
A +YD+ D + N Y T + E G +E Y
Sbjct: 604 YLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAY 644
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 115/236 (48%), Gaps = 9/236 (3%)
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDEMR----CEPNAITYNTMIHGLCKKGEMDGAMR 230
PD +T T+I G CKMG V+ A KV D+M C P+A+T NT++ GL +G + A+
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 231 VFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGL 290
V NR +P VV + +I G K + EA++ ++++ + TY +I+GL
Sbjct: 505 VLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGL 564
Query: 291 CLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDV 350
C++ VD AK+ + + + + LKG C G +A + ++ G +V
Sbjct: 565 CVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNV 624
Query: 351 KAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRV-----LVAERKL 401
Y+ ++ E + G EA IL EM P ++ + ++ L ER+L
Sbjct: 625 VCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKLHDSMDLTVEREL 680
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 10/278 (3%)
Query: 180 YTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
Y +RG C M V M C P+ T NT+I+GLCK G +D AM+V +
Sbjct: 415 YNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMM 474
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM-KEMQEQGCQPNVVTYNALIEGLCLSGN 295
K C PD VT T++ G +G +EAL+ + + M E +P VV YNA+I GL
Sbjct: 475 TGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHK 534
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSV 355
DEA + ++ + + T ++ G C+ + + A K +++ D Y+
Sbjct: 535 GDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAA 594
Query: 356 IVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMG 415
+ C+ G S+A L ++ P+V +N V EA +L+ M + G
Sbjct: 595 FLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNG 654
Query: 416 CSPNFLSYSIVICGLCKVKGRMQLV--EELVSSMLQSG 451
+P+ +++ I L K+ M L EL+S+ SG
Sbjct: 655 QAPDAVTWRI----LDKLHDSMDLTVERELISNPATSG 688
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 196/455 (43%), Gaps = 20/455 (4%)
Query: 68 PNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLA-SKFINAFGDRGDIRG 126
P+ NY+ + I V+ +H L +R L D + + I + + ++
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFD----MRNRGHLPDVVTFTTLIGGYCEIRELEV 215
Query: 127 AIHWFHKAKASG--PCALSCNAVLGVLVRANRVN----LAKAIYDQVVKEALVEPDVFTY 180
A F + + G P +L+ + ++G ++ V L K +++ + E +
Sbjct: 216 AHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAF 275
Query: 181 TTMIRGFCKMGMVESARKVFDEMR-CEPNAI--TYNTMIHGLCKKGEMDGAMRVFNRFAE 237
++ C+ G ++ + M CE + Y MI LC+ GA R+ +
Sbjct: 276 ANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVY-IMK 334
Query: 238 SKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVD 297
SK +P ++ +I G K G A ++E E P+ TY L+E LC +
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTG 394
Query: 298 EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIV 357
+A+ ++ M K D L+G C++ E + + M+ D + ++
Sbjct: 395 KARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVI 454
Query: 358 NEYCKIGKPSEAVSILREMVAKRM-KPSVSSFNAVFRVLVAERKLEEAVLLL-KNMPRMG 415
N CK+G+ +A+ +L +M+ + P + N V L+A+ + EEA+ +L + MP
Sbjct: 455 NGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENK 514
Query: 416 CSPNFLSYSIVICGLCKV-KGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEM 474
P ++Y+ VI GL K+ KG + + + ++ D+T Y ++ G C +M
Sbjct: 515 IKPGVVAYNAVIRGLFKLHKGDEAM--SVFGQLEKASVTADSTTYAIIIDGLCVTNKVDM 572
Query: 475 ALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
A K D+I S + Y F+K LC G + +
Sbjct: 573 AKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSD 607
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 149/381 (39%), Gaps = 81/381 (21%)
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAES------KSCR------------------ 242
P+++ +++IH LC G D A R F F S ++C
Sbjct: 88 PDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGV 147
Query: 243 ------------PDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGL 290
P + + L++ V +A + +M+ +G P+VVT+ LI G
Sbjct: 148 IHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGY 207
Query: 291 CLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEM--------- 341
C ++ A ++ +MR+ GI+ N T + ++ GF + E K MKE+
Sbjct: 208 CEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETD 267
Query: 342 --------------------------VSRGMDL----DVK-AYSVIVNEYCKIGKPSEAV 370
++ M L +V+ AY +++ C+ + A
Sbjct: 268 TSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAA 327
Query: 371 SILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGL 430
I+ M +K +KP +S+NA+ L + A LL+ P+ +Y +++ L
Sbjct: 328 RIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESL 387
Query: 431 CKV--KGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFL 488
CK G+ + V EL ML+ +YN L G C + L + M+
Sbjct: 388 CKELDTGKARNVLEL---MLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCR 444
Query: 489 FNKDTYCTFVKELCAKGKVKE 509
++ T T + LC G+V +
Sbjct: 445 PDEYTLNTVINGLCKMGRVDD 465
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 93/190 (48%), Gaps = 3/190 (1%)
Query: 295 NVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYS 354
N DEA R++ + L+G + + +S++ C GR +EA + ++ G D + +
Sbjct: 70 NPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCN 129
Query: 355 VIVNEYCKIGKPSEAVSILREMVA--KRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
VI+ P + ++ ++ K PS++++N + L ++ +A L+ +M
Sbjct: 130 VIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMR 189
Query: 413 RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDE 472
G P+ ++++ +I G C+++ +++ ++ M G ++ + L+GG+ + D
Sbjct: 190 NRGHLPDVVTFTTLIGGYCEIR-ELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDV 248
Query: 473 EMALKTVYDM 482
E K + ++
Sbjct: 249 ETGRKLMKEL 258
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 18/225 (8%)
Query: 258 RGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG-IKDNVA 316
R EAL + + +G +P+ + +++I LC +G DEA R G I D
Sbjct: 68 RRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERT 127
Query: 317 TNTSMLKGF------CMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAV 370
N + + +G I KE V + Y+ ++N+ C I + +A
Sbjct: 128 CNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVP-----SLTNYNRLMNQLCTIYRVIDAH 182
Query: 371 SILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGL 430
++ +M + P V +F + R+LE A + M G PN L+ S++I G
Sbjct: 183 KLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGF 242
Query: 431 CKVK----GRMQLVEELVSSML-QSGHNLDATMYNCLLGGYCEDG 470
K++ GR +L++EL M ++ ++ A + L+ C +G
Sbjct: 243 LKMRDVETGR-KLMKELWEYMKNETDTSMKAAAFANLVDSMCREG 286
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 171/344 (49%), Gaps = 10/344 (2%)
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDE-----MRCEPNAITYNTMIHGLCKKGEMDG 227
V PD+ T + F ++ V A ++F+E ++C ++N ++ LC++ +
Sbjct: 182 VNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTE--SFNALLRCLCERSHVSA 239
Query: 228 AMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
A VFN A+ + D ++ +I G+SK GEV+E +KEM E G P+ ++Y+ LI
Sbjct: 240 AKSVFN--AKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLI 297
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMD 347
EGL +G ++++ + ++ KG + +M+ F +E++++ + M+ +
Sbjct: 298 EGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECE 357
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
+++ YS +V+ K K S+A+ I EM+++ + P+ + + L + A+++
Sbjct: 358 PNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVI 417
Query: 408 LKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
+ + GC + +Y +++ L + G+ ++ + M +SG+ D +Y ++ G C
Sbjct: 418 YQKSRKAGCRISESAYKLLLKRLSRF-GKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLC 476
Query: 468 EDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
G E A+ + + + K F N+ Y +L A K + Y
Sbjct: 477 IIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAY 520
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 150/339 (44%), Gaps = 41/339 (12%)
Query: 124 IRGAIHWFHKAKASG-PCAL-SCNAVLGVLVRANRVNLAKAIY----------------- 164
+R AI F ++++ G C+ S NA+L L + V+ AK+++
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIM 261
Query: 165 -------------DQVVKEALVE----PDVFTYTTMIRGFCKMGMVESARKVFDEMRCE- 206
++V+KE +VE PD +Y+ +I G + G + + ++FD ++ +
Sbjct: 262 ISGWSKLGEVEEMEKVLKE-MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKG 320
Query: 207 --PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEA 264
P+A YN MI + D +MR + R + + C P++ T++ L+ G K +V +A
Sbjct: 321 NVPDANVYNAMICNFISARDFDESMRYYRRMLDEE-CEPNLETYSKLVSGLIKGRKVSDA 379
Query: 265 LNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKG 324
L +EM +G P + ++ LC G A + K R G + + + +LK
Sbjct: 380 LEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKR 439
Query: 325 FCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPS 384
G+ + EM G DV+ Y IV+ C IG AV ++ E + K P+
Sbjct: 440 LSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPN 499
Query: 385 VSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSY 423
++ + L+A K E A L + + + N S+
Sbjct: 500 RFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSF 538
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 170/370 (45%), Gaps = 46/370 (12%)
Query: 37 YLTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTA 96
+L P+ V ++ N +P L + S + +Y S YA + + ++
Sbjct: 59 WLAPNEVLKIFDNVKDPSFLLPAYQHYSKRK----DYQPTESLYALMINKFGQAKMYDEI 114
Query: 97 DSLLR-----RSNKLSDFLASKFINAFGD-RGDIRGAIHWFHKAKASG--PCALSCNAVL 148
+ ++R + + S+ + +G+ G I AI G P + S N +L
Sbjct: 115 EEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFIL 174
Query: 149 GVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPN 208
+LV A ++D++ K + P K+G+ E +
Sbjct: 175 NLLVSAK-------LFDEIHKIFVSAP-------------KLGV-------------EID 201
Query: 209 AITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM 268
A N +I GLC+ G ++ A+++ + F + KS RP+V+TF+ LI G+ +G+ +EA +
Sbjct: 202 ACCLNILIKGLCESGNLEAALQLLDEFPQQKS-RPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 269 KEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMV 328
+ M+++ +P+ +T+N LI GL G V+E ++ +M++KG + N T +L G
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSF 388
R+ EA + M +M+S GM +Y +V C+ E +LR+MV P +
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Query: 389 NAVFRVLVAE 398
V + +V++
Sbjct: 381 WKVVQCVVSK 390
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 145/324 (44%), Gaps = 9/324 (2%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
L+ N VL + + Y K +P Y MI F + M + +V
Sbjct: 60 LAPNEVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMR 119
Query: 202 ----EMRCE-PNAITYNTM-IHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
E RC YN M I+G G ++ A+ + + C P +F +++
Sbjct: 120 TIKLEKRCRFSEEFFYNLMRIYGNLA-GRINRAIEILFGMPDF-GCWPSSKSFNFILNLL 177
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
E + G + + N LI+GLC SGN++ A +++ + + + NV
Sbjct: 178 VSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNV 237
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T + +++GFC G+ EEA K ++ M ++ D ++++++ K G+ E + +L
Sbjct: 238 MTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLER 297
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
M K +P+ ++ V L+ +++ EA ++ M G P+FLSY ++ GLC+ K
Sbjct: 298 MKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKS 357
Query: 436 RMQLVEELVSSMLQSGHNLDATMY 459
+++ + ++ M+ G M+
Sbjct: 358 VVEM-DWVLRQMVNHGFVPKTLMW 380
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 117/264 (44%), Gaps = 2/264 (0%)
Query: 206 EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSK-RGEVQEA 264
+P Y MI+ + D V K CR F L+ Y G + A
Sbjct: 92 QPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRA 151
Query: 265 LNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKG 324
+ + M + GC P+ ++N ++ L + DE ++ G++ + ++KG
Sbjct: 152 IEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKG 211
Query: 325 FCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPS 384
C G E A++ + E + +V +S ++ +C GK EA +L M +R++P
Sbjct: 212 LCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPD 271
Query: 385 VSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELV 444
+FN + L + ++EE + LL+ M GC PN +Y V+ GL K ++ +E++
Sbjct: 272 TITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE-AKEMM 330
Query: 445 SSMLQSGHNLDATMYNCLLGGYCE 468
S M+ G Y ++ G CE
Sbjct: 331 SQMISWGMRPSFLSYKKMVLGLCE 354
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 107/229 (46%), Gaps = 2/229 (0%)
Query: 205 CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEA 264
C P++ ++N +++ L D ++F A D LI G + G ++ A
Sbjct: 163 CWPSSKSFNFILNLLVSAKLFDEIHKIFVS-APKLGVEIDACCLNILIKGLCESGNLEAA 221
Query: 265 LNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKG 324
L + E +Q +PNV+T++ LI G C G +EA +++ +M + I+ + T ++ G
Sbjct: 222 LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISG 281
Query: 325 FCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPS 384
GR EE I ++ M +G + + Y ++ + EA ++ +M++ M+PS
Sbjct: 282 LRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPS 341
Query: 385 VSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSP-NFLSYSIVICGLCK 432
S+ + L + + E +L+ M G P + + +V C + K
Sbjct: 342 FLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSK 390
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 353 YSVIVNEYCKIGKPSEAVSILREM-VAKRMKPSVSSFNAVFRVL--VAERKLEEAVLLLK 409
Y++++N++ + E ++R + + KR + S F + R+ +A R + A+ +L
Sbjct: 98 YALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGR-INRAIEILF 156
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
MP GC P+ S++ ++ L K + ++ S + G +DA N L+ G CE
Sbjct: 157 GMPDFGCWPSSKSFNFILNLLVSAK-LFDEIHKIFVSAPKLGVEIDACCLNILIKGLCES 215
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
G+ E AL+ + + + N T+ ++ C KGK +E +
Sbjct: 216 GNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAF 257
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 1/146 (0%)
Query: 364 GKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSY 423
G+ + A+ IL M PS SFN + +LV+ + +E + + P++G +
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 424 SIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMI 483
+I+I GLC+ G ++ +L+ Q + ++ L+ G+C G E A K + M
Sbjct: 206 NILIKGLCE-SGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 484 DKSFLFNKDTYCTFVKELCAKGKVKE 509
+ + T+ + L KG+V+E
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEE 290
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 158/318 (49%), Gaps = 31/318 (9%)
Query: 134 AKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMV 193
+ +S P ++G L + ++ A+ ++D L E DV T+T +I G+ K+G +
Sbjct: 39 SSSSRPRVPQPEWLIGELCKVGKIAEARKLFD-----GLPERDVVTWTHVITGYIKLGDM 93
Query: 194 ESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLID 253
AR++FD + N +T+ M+ G + ++ A +F E +VV++ T+ID
Sbjct: 94 REARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER-----NVVSWNTMID 148
Query: 254 GYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKD 313
GY++ G + +AL EM E+ N+V++N++++ L G +DEA + +M +
Sbjct: 149 GYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERM----PRR 200
Query: 314 NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL 373
+V + T+M+ G G+ +EA + M R ++ +++ ++ Y + + EA +
Sbjct: 201 DVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRIDEADQLF 256
Query: 374 REMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKV 433
+ M + +S+N + + R++ +A L MP N +S++ +I G +
Sbjct: 257 QVMPER----DFASWNTMITGFIRNREMNKACGLFDRMP----EKNVISWTTMITGYVEN 308
Query: 434 KGRMQLVEELVSSMLQSG 451
K + + + S ML+ G
Sbjct: 309 KENEEAL-NVFSKMLRDG 325
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 206/434 (47%), Gaps = 68/434 (15%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVE 174
I + GD+R A F + S ++ A++ +R+ ++++A+ ++ + + E
Sbjct: 84 ITGYIKLGDMREARELFDRVD-SRKNVVTWTAMVSGYLRSKQLSIAEMLFQE-----MPE 137
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNR 234
+V ++ TMI G+ + G ++ A ++FDEM E N +++N+M+ L ++G +D AM +F R
Sbjct: 138 RNVVSWNTMIDGYAQSGRIDKALELFDEM-PERNIVSWNSMVKALVQRGRIDEAMNLFER 196
Query: 235 FAESKSCRPDVVTFTTLIDGYSKRGEVQEA---LNCMKEMQEQGCQPNVVTYNALIEGLC 291
R DVV++T ++DG +K G+V EA +CM E N++++NA+I G
Sbjct: 197 MP-----RRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER-------NIISWNAMITGYA 244
Query: 292 LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
+ +DEA ++ M + + A+ +M+ GF R+ E K + R + +V
Sbjct: 245 QNNRIDEADQLFQVMPER----DFASWNTMITGFI---RNREMNKACG-LFDRMPEKNVI 296
Query: 352 AYSVIVNEYCKIGKPSEAVSILREMVAK-RMKPSVSSFNAVFRV------LVAERKLEEA 404
+++ ++ Y + + EA+++ +M+ +KP+V ++ ++ LV +++ +
Sbjct: 297 SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQL 356
Query: 405 V-------------LLLKNMPRMG--------------CSPNFLSYSIVICGLCKVKGRM 437
+ LL + G C + +S++ +I G
Sbjct: 357 ISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAH-HGHG 415
Query: 438 QLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMI-DKSFLFNKDTYCT 496
+ E+ + M + G A Y LL G E ++ D++ D+S ++ Y
Sbjct: 416 KEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTC 475
Query: 497 FVKELCAK-GKVKE 509
V +LC + G++K+
Sbjct: 476 LV-DLCGRAGRLKD 488
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 161/374 (43%), Gaps = 46/374 (12%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
+S NA++ + NR++ A ++ + + E D ++ TMI GF + + A +FD
Sbjct: 234 ISWNAMITGYAQNNRIDEADQLF-----QVMPERDFASWNTMITGFIRNREMNKACGLFD 288
Query: 202 EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
M E N I++ TMI G + E + A+ VF++ S +P+V T+ +++ S +
Sbjct: 289 RM-PEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGL 347
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
E + + + Q N + +AL+ SG + A++M L +D ++ N SM
Sbjct: 348 VEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDN-GLVCQRDLISWN-SM 405
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
+ + G +EAI+ +M G KPS AV+ L + A
Sbjct: 406 IAVYAHHGHGKEAIEMYNQMRKHGF------------------KPS-AVTYLNLLFACSH 446
Query: 382 KPSVSSFNAVFRVLVAERKL---EEAVLLLKNM----PRMGCSPNFL---------SYSI 425
V F+ LV + L EE L ++ R+ NF+ S+
Sbjct: 447 AGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYG 506
Query: 426 VICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDK 485
I C V + + +E+V +L++G + DA Y + Y +G E A + M +K
Sbjct: 507 AILSACNVHNEVSIAKEVVKKVLETGSD-DAGTYVLMSNIYAANGKREEAAEMRMKMKEK 565
Query: 486 SFLFNKDTYCTFVK 499
K C++VK
Sbjct: 566 G--LKKQPGCSWVK 577
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 157/360 (43%), Gaps = 45/360 (12%)
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAM 229
+ V ++ ++ GF + G + A +F++M C PN +TY ++I G G +D A
Sbjct: 243 ISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAF 302
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
V ++ +S+ PD+V +I Y++ G +EA ++++ P+ T+ +++
Sbjct: 303 TVLSK-VQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSS 361
Query: 290 LCLSGNVDEAKRM--------------------------------MSKMRLKGIKDNVAT 317
LCLSG D R+ +S M K + T
Sbjct: 362 LCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYT 421
Query: 318 NTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMV 377
T L C G AIK K ++ LD +S I++ ++GK + AV + + +
Sbjct: 422 YTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCI 481
Query: 378 AKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRM 437
++ V S+ + LV +++EEA L +M G PN +Y +I GLCK K
Sbjct: 482 LEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEK-ET 540
Query: 438 QLVEELVSSMLQSGHNLDAT----MYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDT 493
+ V +++ +Q G LD +Y+ LL Y D E ++V++ F N D
Sbjct: 541 EKVRKILRECIQEGVELDPNTKFQVYS-LLSRYRGDFSE---FRSVFEKWKSEFTENVDV 596
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 168/418 (40%), Gaps = 47/418 (11%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGM---VES 195
P + N ++ V + N VN A I+ E + + F++ + FC G +
Sbjct: 141 PNTRAMNMMMDVNFKLNVVNGALEIF-----EGIRFRNFFSFDIALSHFCSRGGRGDLVG 195
Query: 196 ARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLI 252
+ V M E PN + ++ C+ G + A +V S V ++ L+
Sbjct: 196 VKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICS-GISVSVNVWSMLV 254
Query: 253 DGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIK 312
G+ + GE Q+A++ +M + GC PN+VTY +LI+G G VDEA ++SK++ +G+
Sbjct: 255 SGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLA 314
Query: 313 DNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR---------------------------- 344
++ M+ + +GR EEA K + R
Sbjct: 315 PDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRI 374
Query: 345 ----GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERK 400
G D D+ +++ N + KIG S A+ +L M K ++ L
Sbjct: 375 THGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGA 434
Query: 401 LEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYN 460
A+ + K + + + +S +I L ++ G+ L + + LD Y
Sbjct: 435 PRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIEL-GKYNTAVHLFKRCILEKYPLDVVSYT 493
Query: 461 CLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE--EYLKRCV 516
+ G E A DM + N+ TY T + LC + + ++ + L+ C+
Sbjct: 494 VAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECI 551
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 199/460 (43%), Gaps = 34/460 (7%)
Query: 15 IVTTITSLLQTPDSEPLKKFSCYLTPSLVTQVIK-NTHNPHHALFFFNWASNPQPNPNNY 73
+V +++ L + L S ++ +V Q+++ N+ +P L FF W + +P Y
Sbjct: 32 LVASLSKTLSQSGTRSLDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRPG---Y 88
Query: 74 SHPRSCYAAITDVLLSHSLFSTADSLLRRSNK----LSDFLASKFINAFGDRGDIRGAIH 129
H + Y+ I + L LL + L +A +++ G A+
Sbjct: 89 KHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALG 148
Query: 130 WFHKAKASGPCALSC--NAVLGVLVRANRVNLAKAIY------------DQVVKEALVE- 174
+ G C ++VL LV+ + + LA +I D + +V
Sbjct: 149 VLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSY 208
Query: 175 -PDVFTYTTMIRGFCKMGMVESARKVFDEM----RCEPNAITYNTMIHGLCKKGEMDGAM 229
P ++ G + M ++VF+++ R + + +YN IHG G++D A+
Sbjct: 209 LPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAAL 268
Query: 230 RVFNRFAESKSCR-----PDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
+F E S PD+ T+ +LI G+ ++AL E++ G +P+ TY
Sbjct: 269 SLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYR 328
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
LI+G C S +D+A R+ +M+ G + +L G + EA + ++MV
Sbjct: 329 ILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQE 388
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA 404
G+ Y+++++ + G+ ++ ++ K +F+ V L E KLE A
Sbjct: 389 GVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGA 448
Query: 405 VLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELV 444
V L++ M G S + ++ S ++ G K +GR E+L+
Sbjct: 449 VKLVEEMETRGFSVDLVTISSLLIGFHK-QGRWDWKEKLM 487
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 112/219 (51%), Gaps = 4/219 (1%)
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDEMRC---EPNAITYNTMIHGLCKKGEMDGAMRV 231
PD+ TY ++I C G + A V+DE++ EP+ TY +I G CK MD AMR+
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 232 FNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLC 291
+ + PD + + L+DG K +V EA ++M ++G + + TYN LI+GL
Sbjct: 347 YGEM-QYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLF 405
Query: 292 LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
+G + + ++ KG + T + + C G+ E A+K ++EM +RG +D+
Sbjct: 406 RNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLV 465
Query: 352 AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNA 390
S ++ + K G+ +++ + + P+V +NA
Sbjct: 466 TISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNA 504
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 185/424 (43%), Gaps = 62/424 (14%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + N +L ++A +V A +++++V+E V +TY +I G + G E+
Sbjct: 357 PDTIVYNCLLDGTLKARKVTEACQLFEKMVQEG-VRASCWTYNILIDGLFRNGRAEAGFT 415
Query: 199 VFDEMRCEP---NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+F +++ + +AIT++ + LC++G+++GA+++ E++ D+VT ++L+ G+
Sbjct: 416 LFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEM-ETRGFSVDLVTISSLLIGF 474
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
K+G MK ++E PNV+ +NA +E KR SK K
Sbjct: 475 HKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEA--------SLKRPQSKD--KDYTPMF 524
Query: 316 ATNTSMLKGFCMVGRSEEA----------------------IKHMKEM------VSRGM- 346
+ S L MVG ++ + H + ++RG
Sbjct: 525 PSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQR 584
Query: 347 ------DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVS-SFNAVFRVLVAER 399
DV + ++ Y G S A + + S ++N++ V +
Sbjct: 585 VEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKG 644
Query: 400 KLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMY 459
+ A +L M C+ + +Y+++I GL K+ GR L ++ + + G LD MY
Sbjct: 645 YFQTARGVLDQMFENFCAADIATYNVIIQGLGKM-GRADLASAVLDRLTKQGGYLDIVMY 703
Query: 460 NCLLG--GYCEDGDEEMALKTVYDMIDKSFLFNKD--TYCTFVKELCAKGKVKE--EYLK 513
N L+ G DE L +D + KS N D +Y T ++ GK+KE +YLK
Sbjct: 704 NTLINALGKATRLDEATQL---FDHM-KSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLK 759
Query: 514 RCVD 517
+D
Sbjct: 760 AMLD 763
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/399 (19%), Positives = 162/399 (40%), Gaps = 46/399 (11%)
Query: 154 ANRVNLAKAIYDQVVKEALVEP----DVF---------------TYTTMIRGFCKMGMVE 194
AN + +++ + Q+++ ++P D F Y+ + R C+ G++
Sbjct: 50 ANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLG 109
Query: 195 SARKVFDEMRCEP---NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTL 251
+ M+ + + ++ L + G+ + A+ V + E C V + L
Sbjct: 110 EVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVL 169
Query: 252 IDGYSKRGEVQEALNCMKEMQEQGCQ---------------PNVVTYNALIEGLCLSGNV 296
I K+ E++ AL+ + ++ E P V N L+ GL +
Sbjct: 170 I-ALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMR 228
Query: 297 DEAKRMMSKMR-LKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG------MDLD 349
E KR+ K++ +K K + + + GF G + A+ KEM R D
Sbjct: 229 SEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPD 288
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
+ Y+ +++ C GK +A+ + E+ +P S++ + + ++++A+ +
Sbjct: 289 ICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYG 348
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
M G P+ + Y+ ++ G K + ++ +L M+Q G YN L+ G +
Sbjct: 349 EMQYNGFVPDTIVYNCLLDGTLKAR-KVTEACQLFEKMVQEGVRASCWTYNILIDGLFRN 407
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
G E D+ K + T+ +LC +GK++
Sbjct: 408 GRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLE 446
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 35/214 (16%)
Query: 213 NTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQ 272
NT + KG++ A ++F F T+ +++ + K+G Q A + +M
Sbjct: 598 NTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMF 657
Query: 273 EQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSE 332
E C ++ TYN +I+G + KM GR++
Sbjct: 658 ENFCAADIATYNVIIQG-------------LGKM----------------------GRAD 682
Query: 333 EAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVF 392
A + + +G LD+ Y+ ++N K + EA + M + + P V S+N +
Sbjct: 683 LASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMI 742
Query: 393 RVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
V KL+EA LK M GC PN ++ +I+
Sbjct: 743 EVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 121/306 (39%), Gaps = 33/306 (10%)
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVF 232
D+ T ++++ GF K G + K+ +R PN + +N + K+ + + +
Sbjct: 463 DLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKD--KDY 520
Query: 233 NRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALN-------CMKEMQEQGCQP------- 278
SK D+++ D + EV + M ++ Q QP
Sbjct: 521 TPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLA 580
Query: 279 ------------NVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVA-TNTSMLKGF 325
+V N + G++ A ++ G+ D + T SM+ F
Sbjct: 581 RGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSF 640
Query: 326 CMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSV 385
G + A + +M D+ Y+VI+ K+G+ A ++L + + +
Sbjct: 641 VKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDI 700
Query: 386 SSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVS 445
+N + L +L+EA L +M G +P+ +SY+ +I K G+++ + +
Sbjct: 701 VMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKA-GKLKEAYKYLK 759
Query: 446 SMLQSG 451
+ML +G
Sbjct: 760 AMLDAG 765
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 170/369 (46%), Gaps = 16/369 (4%)
Query: 129 HWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFC 188
W + + P + N ++ + + A+++Y Q+++ V P TY +I+ +C
Sbjct: 165 EWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYV-PTEDTYALLIKAYC 223
Query: 189 KMGMVESARKVFDEMR---CEPNAI---TYNTMIHGLCK-KGEMDGAMRVFNRFAESKSC 241
G++E A V EM+ P I YN I GL K KG + A+ VF R + C
Sbjct: 224 MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDR-C 282
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKR 301
+P T+ +I+ Y K + + EM+ C+PN+ TY AL+ G ++A+
Sbjct: 283 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 342
Query: 302 MMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYC 361
+ +++ G++ +V ++++ + G A + M G + D +Y+++V+ Y
Sbjct: 343 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 402
Query: 362 KIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFL 421
+ G S+A ++ EM + P++ S + R + + ++K M G P+
Sbjct: 403 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD-- 460
Query: 422 SYSIVICGLCKVKGRM---QLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKT 478
+ V+ + + GR+ +E++++ M D + YN L+ Y + G E +
Sbjct: 461 --TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEEL 518
Query: 479 VYDMIDKSF 487
++ +K+F
Sbjct: 519 FVELKEKNF 527
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 162/337 (48%), Gaps = 12/337 (3%)
Query: 121 RGDIRGAIHWFHKAKAS--GPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVF 178
+G+ AI F + K P + N ++ + +A++ ++ +Y ++ + +P++
Sbjct: 264 KGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQCKPNIC 322
Query: 179 TYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRF 235
TYT ++ F + G+ E A ++F++++ EP+ YN ++ + G GA +F+
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS-L 381
Query: 236 AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
+ C PD ++ ++D Y + G +A +EM+ G P + ++ L+ + +
Sbjct: 382 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 441
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSV 355
V + + ++ +M G++ + SML + +G+ + K + EM + D+ Y++
Sbjct: 442 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 501
Query: 356 IVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMG 415
++N Y K G + E+ K +P V ++ + ++ + + + + M G
Sbjct: 502 LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Query: 416 CSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGH 452
C+P+ + +++ C + ++ E V+S+L++ H
Sbjct: 562 CAPDGGTAKVLLSA-CSSEEQV----EQVTSVLRTMH 593
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 110/251 (43%), Gaps = 5/251 (1%)
Query: 224 EMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTY 283
+ D + V S +PDV+ F LID Y ++ + +EA + ++ E P TY
Sbjct: 156 KWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTY 215
Query: 284 NALIEGLCLSGNVDEAKRMMSKMRLKGIKD---NVATNTSMLKGFC-MVGRSEEAIKHMK 339
LI+ C++G ++ A+ ++ +M+ + V + ++G G +EEAI +
Sbjct: 216 ALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQ 275
Query: 340 EMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAER 399
M + Y++++N Y K K + + EM + + KP++ ++ A+ E
Sbjct: 276 RMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREG 335
Query: 400 KLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMY 459
E+A + + + G P+ Y+ ++ + G E+ S M G D Y
Sbjct: 336 LCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRA-GYPYGAAEIFSLMQHMGCEPDRASY 394
Query: 460 NCLLGGYCEDG 470
N ++ Y G
Sbjct: 395 NIMVDAYGRAG 405
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 170/369 (46%), Gaps = 16/369 (4%)
Query: 129 HWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFC 188
W + + P + N ++ + + A+++Y Q+++ V P TY +I+ +C
Sbjct: 143 EWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYV-PTEDTYALLIKAYC 201
Query: 189 KMGMVESARKVFDEMR---CEPNAI---TYNTMIHGLCK-KGEMDGAMRVFNRFAESKSC 241
G++E A V EM+ P I YN I GL K KG + A+ VF R + C
Sbjct: 202 MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDR-C 260
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKR 301
+P T+ +I+ Y K + + EM+ C+PN+ TY AL+ G ++A+
Sbjct: 261 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 320
Query: 302 MMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYC 361
+ +++ G++ +V ++++ + G A + M G + D +Y+++V+ Y
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 380
Query: 362 KIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFL 421
+ G S+A ++ EM + P++ S + R + + ++K M G P+
Sbjct: 381 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD-- 438
Query: 422 SYSIVICGLCKVKGRM---QLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKT 478
+ V+ + + GR+ +E++++ M D + YN L+ Y + G E +
Sbjct: 439 --TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEEL 496
Query: 479 VYDMIDKSF 487
++ +K+F
Sbjct: 497 FVELKEKNF 505
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 162/337 (48%), Gaps = 12/337 (3%)
Query: 121 RGDIRGAIHWFHKAKAS--GPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVF 178
+G+ AI F + K P + N ++ + +A++ ++ +Y ++ + +P++
Sbjct: 242 KGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQCKPNIC 300
Query: 179 TYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRF 235
TYT ++ F + G+ E A ++F++++ EP+ YN ++ + G GA +F+
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS-L 359
Query: 236 AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
+ C PD ++ ++D Y + G +A +EM+ G P + ++ L+ + +
Sbjct: 360 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 419
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSV 355
V + + ++ +M G++ + SML + +G+ + K + EM + D+ Y++
Sbjct: 420 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 479
Query: 356 IVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMG 415
++N Y K G + E+ K +P V ++ + ++ + + + + M G
Sbjct: 480 LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Query: 416 CSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGH 452
C+P+ + +++ C + ++ E V+S+L++ H
Sbjct: 540 CAPDGGTAKVLLSA-CSSEEQV----EQVTSVLRTMH 571
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 192/433 (44%), Gaps = 21/433 (4%)
Query: 38 LTPSLVTQVIKN-THNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTA 96
L+ L+ +V++ H A FF WA+ Q ++H Y ++ +L F T
Sbjct: 159 LSHDLIVEVLERFRHARKPAFRFFCWAAERQ----GFAHDSRTYNSMMSILAKTRQFETM 214
Query: 97 DSLLRRSNKLSDFLASKF---INAFGDRGDIRGAIHWFHKAKAS----GPCALSCNAVLG 149
S+L F + AF + + A+ F K G ++C +L
Sbjct: 215 VSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINC--LLD 272
Query: 150 VLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCE 206
L RA A+ ++D++ KE P++ TYT ++ G+C++ + A +++++M +
Sbjct: 273 SLGRAKLGKEAQVLFDKL-KERFT-PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLK 330
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALN 266
P+ + +N M+ GL + + A+++F+ C P+V ++T +I + K+ ++ A+
Sbjct: 331 PDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC-PNVRSYTIMIRDFCKQSSMETAIE 389
Query: 267 CMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC 326
+M + G QP+ Y LI G +D ++ +M+ KG + T +++K
Sbjct: 390 YFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA 449
Query: 327 MVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVS 386
E A + +M+ ++ + +++I+ Y ++ EM+ K + P +
Sbjct: 450 NQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDN 509
Query: 387 SFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSS 446
S+ + R L+ E K EA L+ M G + Y+ + G+ ++ EEL
Sbjct: 510 SYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHR-GGQPEIFEELAQR 568
Query: 447 MLQSGHNLDATMY 459
SG A ++
Sbjct: 569 AKFSGKFAAAEIF 581
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 180/391 (46%), Gaps = 10/391 (2%)
Query: 130 WFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCK 189
W + + + + N+++ +L + + ++ +++ + L+ + T+T ++ F
Sbjct: 184 WAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME--TFTIAMKAFAA 241
Query: 190 MGMVESARKVFDEMRCEPNAI---TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVV 246
+ A +F+ M+ I T N ++ L + A +F++ E + P+++
Sbjct: 242 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT--PNMM 299
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
T+T L++G+ + + EA +M +QG +P++V +N ++EGL S +A ++ M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVM 359
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP 366
+ KG NV + T M++ FC E AI++ +MV G+ D Y+ ++ + K
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 367 SEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
+L+EM K P ++NA+ +++ ++ E A + M + P+ +++++
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMI 479
Query: 427 ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKS 486
+ + ++ + M++ G D Y L+ G +G A + + +M+DK
Sbjct: 480 MKSYFMARN-YEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKG 538
Query: 487 FLFNKDTYCTFVKELCAKGK--VKEEYLKRC 515
Y F + G+ + EE +R
Sbjct: 539 MKTPLIDYNKFAADFHRGGQPEIFEELAQRA 569
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 159/352 (45%), Gaps = 13/352 (3%)
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEMRCEP--NAITYNTMIHGLCKKGEMDGAMRVFN 233
D TY +M+ K E+ V +EM + T+ + E A+ +F
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFE 253
Query: 234 RFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
+ K + V T L+D + +EA +++E+ PN++TY L+ G C
Sbjct: 254 LMKKYK-FKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRV 311
Query: 294 GNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAY 353
N+ EA R+ + M +G+K ++ + ML+G + +AIK M S+G +V++Y
Sbjct: 312 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 354 SVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPR 413
++++ ++CK A+ +MV ++P + + + ++KL+ LLK M
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 414 MGCSPNFLSYSIVICGLCKVKGRMQLVEE---LVSSMLQSGHNLDATMYNCLLGGYCEDG 470
G P+ +Y+ +I K+ ++ E + + M+Q+ +N ++ Y
Sbjct: 432 KGHPPDGKTYNALI----KLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMAR 487
Query: 471 DEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE--EYLKRCVDNTL 520
+ EM +MI K + ++Y ++ L +GK +E YL+ +D +
Sbjct: 488 NYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 144/315 (45%), Gaps = 14/315 (4%)
Query: 199 VFDEMRCEPNAITYNTMIHGLCK-KGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSK 257
V DEM+ + ++++ ++ L + + A R F AE + D T+ +++ +K
Sbjct: 151 VLDEMKLD---LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK 207
Query: 258 RGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVAT 317
+ + ++ ++EM +G + T+ ++ + +A + M+ K V T
Sbjct: 208 TRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 266
Query: 318 NTSMLK--GFCMVGRSEEAI-KHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
+L G +G+ + + +KE + M Y+V++N +C++ EA I
Sbjct: 267 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNM----MTYTVLLNGWCRVRNLIEAARIWN 322
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
+M+ + +KP + + N + L+ RK +A+ L M G PN SY+I+I CK +
Sbjct: 323 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK-Q 381
Query: 435 GRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTY 494
M+ E M+ SG DA +Y CL+ G+ + + + +M +K + TY
Sbjct: 382 SSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 441
Query: 495 CTFVKELCAKGKVKE 509
+K L A K+ E
Sbjct: 442 NALIK-LMANQKMPE 455
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 130/245 (53%), Gaps = 9/245 (3%)
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDEMR------CEPNAITYNTMIHGLCKKGEMDGA 228
PD YTT+++G+ K G V ++ + MR P+ +TY T++ G MD A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQ-GCQPNVVTYNALI 287
+V A + +T+ L+ GY K+ ++ A + ++EM E G +P+VV+YN +I
Sbjct: 472 RQVLAEMAR-MGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG-M 346
+G L + A ++MR +GI + T+++K F M G+ + A + EM++ +
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
+D+ A++++V YC++G +A ++ M P+V+++ ++ + RK +A+L
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALL 650
Query: 407 LLKNM 411
L K +
Sbjct: 651 LWKEI 655
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 113/225 (50%), Gaps = 15/225 (6%)
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRV 231
PD TYTT++ F G+++ AR+V EM N ITYN ++ G CK+ ++D A +
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 232 FNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLC 291
E PDVV++ +IDG + AL EM+ +G P ++Y L++
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 292 LSGNVDEAKR----MMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMD 347
+SG A R MM+ R+K D +A N +++G+C +G E+A + + M G
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVK--VDLIAWNM-LVEGYCRLGLIEDAQRVVSRMKENGFY 626
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREM-----VAKRMKPSVSS 387
+V Y + N + KP +A+ + +E+ V K+ PS SS
Sbjct: 627 PNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSS 671
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 111/232 (47%), Gaps = 4/232 (1%)
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFN--RFAESKSCRPDVVTFTTLIDGYSKRGEVQEA 264
P++ Y T++ G K G + R+ R + ++ PD VT+TT++ + G + A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 265 LNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM-RLKGIKDNVATNTSMLK 323
+ EM G N +TYN L++G C +D A+ ++ +M GI+ +V + ++
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 324 GFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMV-AKRMK 382
G ++ S A+ EM +RG+ +Y+ ++ + G+P A + EM+ R+K
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVK 591
Query: 383 PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
+ ++N + +E+A ++ M G PN +Y + G+ + +
Sbjct: 592 VDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQAR 643
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
++ N +L + +++ A+ + ++ ++A +EPDV +Y +I G + A F+
Sbjct: 488 ITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFN 547
Query: 202 EMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
EMR P I+Y T++ G+ A RVF+ + D++ + L++GY +
Sbjct: 548 EMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRL 607
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGL 290
G +++A + M+E G PNV TY +L G+
Sbjct: 608 GLIEDAQRVVSRMKENGFYPNVATYGSLANGV 639
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 142/347 (40%), Gaps = 44/347 (12%)
Query: 204 RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQE 263
+ P+ +N +++ G+ D ++F +E C PDV+T+ +I ++ G +
Sbjct: 231 QSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEW-DCEPDVLTYNVMIKLCARVGRKEL 289
Query: 264 ALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK-------------- 309
+ ++ + ++G + + T ++L+ G++ A+R++ MR K
Sbjct: 290 IVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAE 349
Query: 310 ---------GIKDNVATNTSMLKGFCMVGR-SEEAIKHM-KEMVSRGMDL---------- 348
D A G+ SEE + + K+++ +D
Sbjct: 350 DLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKV 409
Query: 349 ---DVKAYSVIVNEYCKIGKPSEAVSIL---REMVAKRMKPSVSSFNAVFRVLVAERKLE 402
D + Y+ ++ Y K G+ ++ +L R + P ++ V V ++
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 403 EAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ-SGHNLDATMYNC 461
A +L M RMG N ++Y++++ G CK + ++ E+L+ M + +G D YN
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCK-QLQIDRAEDLLREMTEDAGIEPDVVSYNI 528
Query: 462 LLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
++ G D AL +M + K +Y T +K G+ K
Sbjct: 529 IIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPK 575
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 86/187 (45%), Gaps = 23/187 (12%)
Query: 123 DIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTY 180
D GA+ +F++ + G P +S ++ + + LA ++D+++ + V+ D+ +
Sbjct: 538 DSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAW 597
Query: 181 TTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAE 237
++ G+C++G++E A++V M+ PN TY ++ +G+ + + A+ ++ E
Sbjct: 598 NMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKE 657
Query: 238 ----------SKSC--------RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPN 279
S S +PD TL D + ++AL + M+E G PN
Sbjct: 658 RCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPN 717
Query: 280 VVTYNAL 286
Y +
Sbjct: 718 KTKYKKI 724
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 161/327 (49%), Gaps = 10/327 (3%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
++ + +G + AI + + +G P S +++L + + L KAI+ +++
Sbjct: 196 LLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQ 255
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRV 231
L DV+ TT+I + K G + AR VFD M + N + +N+++ GL + A +
Sbjct: 256 LWY-DVYVETTLIDMYIKTGYLPYARMVFDMMDAK-NIVAWNSLVSGLSYACLLKDAEAL 313
Query: 232 FNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLC 291
R E + +PD +T+ +L GY+ G+ ++AL+ + +M+E+G PNVV++ A+ G
Sbjct: 314 MIRM-EKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCS 372
Query: 292 LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
+GN A ++ KM+ +G+ N AT +++LK + + + + + D
Sbjct: 373 KNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAY 432
Query: 352 AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
+ +V+ Y K G A+ I + K S++S+N + + EE + M
Sbjct: 433 VATALVDMYGKSGDLQSAIEIFWGIKNK----SLASWNCMLMGYAMFGRGEEGIAAFSVM 488
Query: 412 PRMGCSPNFLSYSIVICGLCKVKGRMQ 438
G P+ ++++ V+ +CK G +Q
Sbjct: 489 LEAGMEPDAITFTSVLS-VCKNSGLVQ 514
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 191/430 (44%), Gaps = 47/430 (10%)
Query: 96 ADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRAN 155
A+ L K D ++ + G+ A+ F + + SG A V + V +N
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSN 101
Query: 156 RVNLA--KAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYN 213
+ A + I+ V++ L E +V ++I + + G +E +RKVF+ M+ + N ++N
Sbjct: 102 KEGFAEGRQIHGYVLRLGL-ESNVSMCNSLIVMYSRNGKLELSRKVFNSMK-DRNLSSWN 159
Query: 214 TMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQE 273
+++ K G +D A+ + + E +PD+VT+ +L+ GY+ +G ++A+ +K MQ
Sbjct: 160 SILSSYTKLGYVDDAIGLLDEM-EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI 218
Query: 274 QGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG---- 329
G +P+ + ++L++ + G++ K + + + +V T+++ + G
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPY 278
Query: 330 -----------------------------RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEY 360
+ EA+ M M G+ D ++ + + Y
Sbjct: 279 ARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEAL--MIRMEKEGIKPDAITWNSLASGY 336
Query: 361 CKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNF 420
+GKP +A+ ++ +M K + P+V S+ A+F A+ + M G PN
Sbjct: 337 ATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNA 396
Query: 421 LSYSIVICGLCKVKGRMQLV---EELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALK 477
+ S L K+ G + L+ +E+ L+ DA + L+ Y + GD + A++
Sbjct: 397 ATMST----LLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIE 452
Query: 478 TVYDMIDKSF 487
+ + +KS
Sbjct: 453 IFWGIKNKSL 462
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/406 (19%), Positives = 176/406 (43%), Gaps = 53/406 (13%)
Query: 144 CNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM 203
CN+++ + R ++ L++ +++ ++ + ++ ++ +++ + K+G V+ A + DEM
Sbjct: 127 CNSLIVMYSRNGKLELSRKVFN-----SMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 204 RC---EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRP----------------- 243
+P+ +T+N+++ G KG A+ V R + +P
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPGH 240
Query: 244 ------------------DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNA 285
DV TTLID Y K G + A M + N+V +N+
Sbjct: 241 LKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK----NIVAWNS 296
Query: 286 LIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG 345
L+ GL + + +A+ +M +M +GIK + T S+ G+ +G+ E+A+ + +M +G
Sbjct: 297 LVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG 356
Query: 346 MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAV 405
+ +V +++ I + K G A+ + +M + + P+ ++ + + ++L L
Sbjct: 357 VAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSG- 415
Query: 406 LLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGG 465
K + N + + V L + G+ ++ + + N +NC+L G
Sbjct: 416 ---KEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIE-IFWGIKNKSLASWNCMLMG 471
Query: 466 YCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
Y G E + M++ + T+ + + G V+E +
Sbjct: 472 YAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGW 517
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 143/296 (48%), Gaps = 10/296 (3%)
Query: 206 EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL 265
E N N++I + G+++ + +VFN + ++ ++ +++ Y+K G V +A+
Sbjct: 121 ESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR-----NLSSWNSILSSYTKLGYVDDAI 175
Query: 266 NCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGF 325
+ EM+ G +P++VT+N+L+ G G +A ++ +M++ G+K + ++ +S+L+
Sbjct: 176 GLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAV 235
Query: 326 CMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSV 385
G + ++ + DV + +++ Y K G A + M AK ++
Sbjct: 236 AEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK----NI 291
Query: 386 SSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVS 445
++N++ L L++A L+ M + G P+ ++++ + G + G+ + +++
Sbjct: 292 VAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATL-GKPEKALDVIG 350
Query: 446 SMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKEL 501
M + G + + + G ++G+ ALK M ++ N T T +K L
Sbjct: 351 KMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 20/180 (11%)
Query: 102 RSNKLSD-FLASKFINAFGDRGDIRGAIHWF----HKAKASGPCALSCNAVLGVLVRANR 156
R N + D ++A+ ++ +G GD++ AI F +K+ AS C L A+ G R
Sbjct: 424 RKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFG------R 477
Query: 157 VNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE----PNAITY 212
A + V+ EA +EPD T+T+++ G+V+ K FD MR P
Sbjct: 478 GEEGIAAF-SVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHC 536
Query: 213 NTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQ 272
+ M+ L + G +D A F ++ S +PD + + +++ A K +Q
Sbjct: 537 SCMVDLLGRSGYLDEAW----DFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQ 592
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 131/524 (25%), Positives = 224/524 (42%), Gaps = 40/524 (7%)
Query: 13 SSIVTTITSLLQTPDSEPLKKFSCYLTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNN 72
+++ T +PD L S L +V V+ A FFNWAS + N+
Sbjct: 46 QNLIVIFTRQPFSPDDPELLILSPELNTKVVETVLNGFKRWGLAYLFFNWASKQEGYRND 105
Query: 73 YSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFH 132
+ + ++ + SL + +L +S FI G+ G + A F
Sbjct: 106 MYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFD 165
Query: 133 KAKASGPC---ALSCNAVLGVLVRAN--RVNLAKAIYDQVVKEALVEPDVFTYTTMIRGF 187
+ + G C A + N +L + ++N V L +A + +++ D FT T +++ +
Sbjct: 166 RVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKE-MRDCGFHFDKFTLTPVLQVY 224
Query: 188 CKMGMVESARKVFDEM--RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDV 245
C G E A VF+E+ R + ++ CK G++D A + E + R +
Sbjct: 225 CNTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEML-EERDIRLNY 283
Query: 246 VTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSK 305
T+ LI G+ K + +A ++M+ G ++ Y+ LI GLC +++ A + +
Sbjct: 284 KTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLE 343
Query: 306 MRLKGIKDNVATNTSMLKGF---CMVGRSEEAI-------------KHMKEMVSRGMDLD 349
++ GI + +L F + R E I K + E R DL
Sbjct: 344 IKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRN-DLV 402
Query: 350 VKAYSVIVN---EYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
+AYS I N Y G SE V +L++ K + P S + V LV K++ AV
Sbjct: 403 HEAYSFIQNLMGNYESDG-VSEIVKLLKDH-NKAILPDSDSLSIVINCLVKANKVDMAVT 460
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGY 466
LL ++ + G P + Y+ +I G+CK +GR + +L+ M +G NC+ G
Sbjct: 461 LLHDIVQNGLIPGPMMYNNIIEGMCK-EGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCL 519
Query: 467 CEDGDEEMALKTVYDMIDKSFLFNKDTY---CTF-VKELCAKGK 506
E D AL D++ K + + + TF VK+LC G+
Sbjct: 520 AERCDFVGAL----DLLKKMRFYGFEPWIKHTTFLVKKLCENGR 559
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 136/303 (44%), Gaps = 9/303 (2%)
Query: 107 SDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIY 164
S F + +R D GA+ K + G P ++ L R A
Sbjct: 508 SQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYL 567
Query: 165 DQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM----RCEPNAITYNTMIHGLC 220
D V E + V + T I G K V+ ++F ++ C P+ I Y+ +I LC
Sbjct: 568 DDVAGEGFLGHMVAS-TAAIDGLIKNEGVDRGLELFRDICANGHC-PDVIAYHVLIKALC 625
Query: 221 KKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNV 280
K A +FN SK +P V T+ ++IDG+ K GE+ L+C+ M E P+V
Sbjct: 626 KACRTMEADILFNEMV-SKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDV 684
Query: 281 VTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKE 340
+TY +LI GLC SG EA ++M+ K N T ++++G C G S EA+ + +E
Sbjct: 685 ITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFRE 744
Query: 341 MVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERK 400
M + M+ D Y +V+ + + I REMV K P N + V V +
Sbjct: 745 MEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSKF 804
Query: 401 LEE 403
+E+
Sbjct: 805 VED 807
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 143/326 (43%), Gaps = 38/326 (11%)
Query: 135 KASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVE 194
KA P + S + V+ LV+AN+V++A + +V+ L+ P Y +I G CK G E
Sbjct: 433 KAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLI-PGPMMYNNIIEGMCKEGRSE 491
Query: 195 SARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNR--------------FAE 237
+ K+ EM+ EP+ T N + L ++ + GA+ + + F
Sbjct: 492 ESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLV 551
Query: 238 SKSCR-----------PDV---------VTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQ 277
K C DV V T IDG K V L +++ G
Sbjct: 552 KKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC 611
Query: 278 PNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKH 337
P+V+ Y+ LI+ LC + EA + ++M KG+K VAT SM+ G+C G + +
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC 671
Query: 338 MKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVA 397
+ M + DV Y+ +++ C G+PSEA+ EM K P+ +F A+ + L
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK 731
Query: 398 ERKLEEAVLLLKNMPRMGCSPNFLSY 423
EA++ + M P+ Y
Sbjct: 732 CGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 121/285 (42%), Gaps = 9/285 (3%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL--VEPDVFTYTTMIRGFCKMGMVESA 196
P + N + G L A R + A+ D + K EP + T +++ C+ G A
Sbjct: 507 PSQFTLNCIYGCL--AERCDFVGAL-DLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDA 563
Query: 197 RKVFDEMRCEP---NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLID 253
K D++ E + + I GL K +D + +F + C PDV+ + LI
Sbjct: 564 CKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC-PDVIAYHVLIK 622
Query: 254 GYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKD 313
K EA EM +G +P V TYN++I+G C G +D + +M
Sbjct: 623 ALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNP 682
Query: 314 NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL 373
+V T TS++ G C GR EAI EM + + + ++ CK G EA+
Sbjct: 683 DVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYF 742
Query: 374 REMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSP 418
REM K M+P + + ++ ++ + + + M G P
Sbjct: 743 REMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 163/364 (44%), Gaps = 3/364 (0%)
Query: 147 VLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRC- 205
++G + + + + L K++++ ++ LV ++ + G+ E + + D +
Sbjct: 376 IIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAI 435
Query: 206 EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL 265
P++ + + +I+ L K ++D A+ + + ++ P + + +I+G K G +E+L
Sbjct: 436 LPDSDSLSIVINCLVKANKVDMAVTLLHDIVQN-GLIPGPMMYNNIIEGMCKEGRSEESL 494
Query: 266 NCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGF 325
+ EM++ G +P+ T N + L + A ++ KMR G + + T ++K
Sbjct: 495 KLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKL 554
Query: 326 CMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSV 385
C GR+ +A K++ ++ G + A + ++ K + + R++ A P V
Sbjct: 555 CENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDV 614
Query: 386 SSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVS 445
+++ + + L + EA +L M G P +Y+ +I G CK +G + +
Sbjct: 615 IAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCK-EGEIDRGLSCIV 673
Query: 446 SMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKG 505
M + N D Y L+ G C G A+ +M K N+ T+ ++ LC G
Sbjct: 674 RMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCG 733
Query: 506 KVKE 509
E
Sbjct: 734 WSGE 737
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 152/340 (44%), Gaps = 22/340 (6%)
Query: 177 VFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
+ Y ++ GF + +V A + I L E DG +
Sbjct: 386 MLLYKSLFEGFIRNDLVHEAY----------------SFIQNLMGNYESDGVSEIVKLLK 429
Query: 237 E-SKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
+ +K+ PD + + +I+ K +V A+ + ++ + G P + YN +IEG+C G
Sbjct: 430 DHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGR 489
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSE--EAIKHMKEMVSRGMDLDVKAY 353
+E+ +++ +M+ G++ + T + C+ R + A+ +K+M G + +K
Sbjct: 490 SEESLKLLGEMKDAGVEPSQFTLNCIYG--CLAERCDFVGALDLLKKMRFYGFEPWIKHT 547
Query: 354 SVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPR 413
+ +V + C+ G+ +A L ++ + + + A L+ ++ + L +++
Sbjct: 548 TFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICA 607
Query: 414 MGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEE 473
G P+ ++Y ++I LCK M+ + L + M+ G YN ++ G+C++G+ +
Sbjct: 608 NGHCPDVIAYHVLIKALCKACRTME-ADILFNEMVSKGLKPTVATYNSMIDGWCKEGEID 666
Query: 474 MALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLK 513
L + M + + TY + + LCA G+ E +
Sbjct: 667 RGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFR 706
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 192/433 (44%), Gaps = 21/433 (4%)
Query: 38 LTPSLVTQVIKN-THNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTA 96
L+ L+ +V++ H A FF WA+ Q ++H Y ++ +L F T
Sbjct: 159 LSHDLIVEVLERFRHARKPAFRFFCWAAERQ----GFAHASRTYNSMMSILAKTRQFETM 214
Query: 97 DSLLRRSNKLSDFLASKF---INAFGDRGDIRGAIHWFHKAKAS----GPCALSCNAVLG 149
S+L F + AF + + A+ F K G ++C +L
Sbjct: 215 VSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINC--LLD 272
Query: 150 VLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCE 206
L RA A+ ++D++ KE P++ TYT ++ G+C++ + A +++++M +
Sbjct: 273 SLGRAKLGKEAQVLFDKL-KERFT-PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLK 330
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALN 266
P+ + +N M+ GL + + A+++F+ C P+V ++T +I + K+ ++ A+
Sbjct: 331 PDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC-PNVRSYTIMIRDFCKQSSMETAIE 389
Query: 267 CMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC 326
+M + G QP+ Y LI G +D ++ +M+ KG + T +++K
Sbjct: 390 YFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA 449
Query: 327 MVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVS 386
E + +M+ ++ + +++I+ Y ++ EM+ K + P +
Sbjct: 450 NQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDN 509
Query: 387 SFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSS 446
S+ + R L++E K EA L+ M G + Y+ + G+ ++ EEL
Sbjct: 510 SYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHR-GGQPEIFEELAQR 568
Query: 447 MLQSGHNLDATMY 459
SG A ++
Sbjct: 569 AKFSGKFAAAEIF 581
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 178/391 (45%), Gaps = 10/391 (2%)
Query: 130 WFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCK 189
W + + + + N+++ +L + + ++ +++ + L+ + T+T ++ F
Sbjct: 184 WAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME--TFTIAMKAFAA 241
Query: 190 MGMVESARKVFDEMRCEPNAI---TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVV 246
+ A +F+ M+ I T N ++ L + A +F++ E + P+++
Sbjct: 242 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT--PNMM 299
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
T+T L++G+ + + EA +M + G +P++V +N ++EGL S +A ++ M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 359
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP 366
+ KG NV + T M++ FC E AI++ +MV G+ D Y+ ++ + K
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 367 SEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
+L+EM K P ++NA+ +++ ++ E + M + P+ +++++
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 479
Query: 427 ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKS 486
+ V ++ + M++ G D Y L+ G +G A + + +M+DK
Sbjct: 480 MKSYF-VARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG 538
Query: 487 FLFNKDTYCTFVKELCAKGK--VKEEYLKRC 515
Y F + G+ + EE +R
Sbjct: 539 MKTPLIDYNKFAADFHRGGQPEIFEELAQRA 569
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 158/349 (45%), Gaps = 13/349 (3%)
Query: 179 TYTTMIRGFCKMGMVESARKVFDEMRCEP--NAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
TY +M+ K E+ V +EM + T+ + E A+ +F
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNV 296
+ K + V T L+D + +EA +++E+ PN++TY L+ G C N+
Sbjct: 257 KYK-FKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNL 314
Query: 297 DEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVI 356
EA R+ + M G+K ++ + ML+G + +AIK M S+G +V++Y+++
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 357 VNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGC 416
+ ++CK A+ +MV ++P + + + ++KL+ LLK M G
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 417 SPNFLSYSIVICGLCKVKGRMQLVEE---LVSSMLQSGHNLDATMYNCLLGGYCEDGDEE 473
P+ +Y+ +I K+ ++ E + + M+Q+ +N ++ Y + E
Sbjct: 435 PPDGKTYNALI----KLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 490
Query: 474 MALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE--EYLKRCVDNTL 520
M +MI K + ++Y ++ L ++GK +E YL+ +D +
Sbjct: 491 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 138/315 (43%), Gaps = 14/315 (4%)
Query: 199 VFDEMRCEPNAITYNTMIHGLCK-KGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSK 257
V DEM+ + ++++ ++ L + + A R F AE + T+ +++ +K
Sbjct: 151 VLDEMKLD---LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAK 207
Query: 258 RGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVAT 317
+ + ++ ++EM +G + T+ ++ + +A + M+ K V T
Sbjct: 208 TRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 266
Query: 318 NTSMLKGFCMVGRSEEA---IKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
+L +EA +KE + M Y+V++N +C++ EA I
Sbjct: 267 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNM----MTYTVLLNGWCRVRNLIEAARIWN 322
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
+M+ +KP + + N + L+ K +A+ L M G PN SY+I+I CK +
Sbjct: 323 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK-Q 381
Query: 435 GRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTY 494
M+ E M+ SG DA +Y CL+ G+ + + + +M +K + TY
Sbjct: 382 SSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 441
Query: 495 CTFVKELCAKGKVKE 509
+K L A K+ E
Sbjct: 442 NALIK-LMANQKMPE 455
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 192/433 (44%), Gaps = 21/433 (4%)
Query: 38 LTPSLVTQVIKN-THNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTA 96
L+ L+ +V++ H A FF WA+ Q ++H Y ++ +L F T
Sbjct: 158 LSHDLIVEVLERFRHARKPAFRFFCWAAERQ----GFAHDSRTYNSMMSILAKTRQFETM 213
Query: 97 DSLLRRSNKLSDFLASKF---INAFGDRGDIRGAIHWFHKAKAS----GPCALSCNAVLG 149
S+L F + AF + + A+ F K G ++C +L
Sbjct: 214 VSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINC--LLD 271
Query: 150 VLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCE 206
L RA A+ ++D++ KE P++ TYT ++ G+C++ + A +++++M +
Sbjct: 272 SLGRAKLGKEAQVLFDKL-KERFT-PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLK 329
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALN 266
P+ + +N M+ GL + + A+++F+ C P+V ++T +I + K+ ++ A+
Sbjct: 330 PDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC-PNVRSYTIMIRDFCKQSSMETAIE 388
Query: 267 CMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC 326
+M + G QP+ Y LI G +D ++ +M+ KG + T +++K
Sbjct: 389 YFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA 448
Query: 327 MVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVS 386
E + +M+ ++ + +++I+ Y ++ EM+ K + P +
Sbjct: 449 NQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDN 508
Query: 387 SFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSS 446
S+ + R L++E K EA L+ M G + Y+ + G+ ++ EEL
Sbjct: 509 SYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHR-GGQPEIFEELAQR 567
Query: 447 MLQSGHNLDATMY 459
SG A ++
Sbjct: 568 AKFSGKFAAAEIF 580
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 178/391 (45%), Gaps = 10/391 (2%)
Query: 130 WFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCK 189
W + + + + N+++ +L + + ++ +++ + L+ + T+T ++ F
Sbjct: 183 WAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME--TFTIAMKAFAA 240
Query: 190 MGMVESARKVFDEMRCEPNAI---TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVV 246
+ A +F+ M+ I T N ++ L + A +F++ E + P+++
Sbjct: 241 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT--PNMM 298
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
T+T L++G+ + + EA +M + G +P++V +N ++EGL S +A ++ M
Sbjct: 299 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 358
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP 366
+ KG NV + T M++ FC E AI++ +MV G+ D Y+ ++ + K
Sbjct: 359 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 418
Query: 367 SEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
+L+EM K P ++NA+ +++ ++ E + M + P+ +++++
Sbjct: 419 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 478
Query: 427 ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKS 486
+ V ++ + M++ G D Y L+ G +G A + + +M+DK
Sbjct: 479 MKSYF-VARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG 537
Query: 487 FLFNKDTYCTFVKELCAKGK--VKEEYLKRC 515
Y F + G+ + EE +R
Sbjct: 538 MKTPLIDYNKFAADFHRGGQPEIFEELAQRA 568
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 159/352 (45%), Gaps = 13/352 (3%)
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEMRCEP--NAITYNTMIHGLCKKGEMDGAMRVFN 233
D TY +M+ K E+ V +EM + T+ + E A+ +F
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFE 252
Query: 234 RFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
+ K + V T L+D + +EA +++E+ PN++TY L+ G C
Sbjct: 253 LMKKYK-FKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRV 310
Query: 294 GNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAY 353
N+ EA R+ + M G+K ++ + ML+G + +AIK M S+G +V++Y
Sbjct: 311 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 370
Query: 354 SVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPR 413
++++ ++CK A+ +MV ++P + + + ++KL+ LLK M
Sbjct: 371 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 430
Query: 414 MGCSPNFLSYSIVICGLCKVKGRMQLVEE---LVSSMLQSGHNLDATMYNCLLGGYCEDG 470
G P+ +Y+ +I K+ ++ E + + M+Q+ +N ++ Y
Sbjct: 431 KGHPPDGKTYNALI----KLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 486
Query: 471 DEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE--EYLKRCVDNTL 520
+ EM +MI K + ++Y ++ L ++GK +E YL+ +D +
Sbjct: 487 NYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 538
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 142/315 (45%), Gaps = 14/315 (4%)
Query: 199 VFDEMRCEPNAITYNTMIHGLCK-KGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSK 257
V DEM+ + ++++ ++ L + + A R F AE + D T+ +++ +K
Sbjct: 150 VLDEMKLD---LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK 206
Query: 258 RGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVAT 317
+ + ++ ++EM +G + T+ ++ + +A + M+ K V T
Sbjct: 207 TRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 265
Query: 318 NTSMLK--GFCMVGRSEEAI-KHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
+L G +G+ + + +KE + M Y+V++N +C++ EA I
Sbjct: 266 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNM----MTYTVLLNGWCRVRNLIEAARIWN 321
Query: 375 EMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
+M+ +KP + + N + L+ K +A+ L M G PN SY+I+I CK +
Sbjct: 322 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK-Q 380
Query: 435 GRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTY 494
M+ E M+ SG DA +Y CL+ G+ + + + +M +K + TY
Sbjct: 381 SSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 440
Query: 495 CTFVKELCAKGKVKE 509
+K L A K+ E
Sbjct: 441 NALIK-LMANQKMPE 454
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 145/293 (49%), Gaps = 21/293 (7%)
Query: 147 VLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR-- 204
++G R N V A+ ++ +V + +V PD+FTYT MI +C++ + A +F++M+
Sbjct: 606 LIGAWCRVNNVRKAREFFEILVTKKIV-PDLFTYTIMINTYCRLNEPKQAYALFEDMKRR 664
Query: 205 -CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQE 263
+P+ +TY+ +++ E+D R E+ PDVV +T +I+ Y ++++
Sbjct: 665 DVKPDVVTYSVLLNS---DPELD-----MKREMEAFDVIPDVVYYTIMINRYCHLNDLKK 716
Query: 264 ALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSK-MRLKGIKDNVATNTSML 322
K+M+ + P+VVTY L++ ++ +R +S+ M+ +K +V T ++
Sbjct: 717 VYALFKDMKRREIVPDVVTYTVLLK--------NKPERNLSREMKAFDVKPDVFYYTVLI 768
Query: 323 KGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMK 382
C +G EA + +M+ G+D D Y+ ++ CK+G EA I M+ +K
Sbjct: 769 DWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVK 828
Query: 383 PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
P V + A+ + +AV L+K M G P S S V K KG
Sbjct: 829 PDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKLKAKG 881
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 171/413 (41%), Gaps = 38/413 (9%)
Query: 134 AKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDV----FTYTTMIRGFCK 189
++ PC N + G+ + N++ Q +++A + D Y ++RG C
Sbjct: 246 SETRNPCVFYLNFIEGLCL--NQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCY 303
Query: 190 MGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVV 246
+E A V +M +P+ Y+ +I G K + A+ VFN+ + + R + V
Sbjct: 304 EMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRK-RINCV 362
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
++++ Y + G EA + KE +E + V YN + L G V+EA + +M
Sbjct: 363 IVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREM 422
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP 366
KGI +V T+++ G C+ G+ +A M EM G D+ Y+V+ G
Sbjct: 423 TGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLA 482
Query: 367 SEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA---------------VLLLKNM 411
EA L+ M + +KP+ + N V L+ +L++A ++K
Sbjct: 483 QEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGF 542
Query: 412 PRMGCSPNFLS-------------YSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATM 458
GC + Y + LC K + ++L+ M + G + +M
Sbjct: 543 CAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSM 602
Query: 459 YNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
Y L+G +C + A + ++ K + + TY + C + K+ Y
Sbjct: 603 YGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAY 655
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 153/367 (41%), Gaps = 49/367 (13%)
Query: 169 KEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEM 225
+E + D Y K+G VE A ++F EM + P+ I Y T+I G C +G+
Sbjct: 388 RETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKC 447
Query: 226 DGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNA 285
A + + PD+V + L G + G QEA +K M+ +G +P VT+N
Sbjct: 448 SDAFDLMIEM-DGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNM 506
Query: 286 LIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHM------- 338
+IEGL +G +D+A+ + K ++N + SM+KGFC G + A +
Sbjct: 507 VIEGLIDAGELDKAEAFYESLEHKS-REN---DASMVKGFCAAGCLDHAFERFIRLEFPL 562
Query: 339 ---------------KEMVSRGMDL-----------DVKAYSVIVNEYCKIGKPSEAVSI 372
K+ +S+ DL + Y ++ +C++ +A
Sbjct: 563 PKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREF 622
Query: 373 LREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCK 432
+V K++ P + ++ + + ++A L ++M R P+ ++YS+++ +
Sbjct: 623 FEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPE 682
Query: 433 VKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKD 492
+ + ++ V D Y ++ YC D + DM + + +
Sbjct: 683 LDMKREMEAFDVIP--------DVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVV 734
Query: 493 TYCTFVK 499
TY +K
Sbjct: 735 TYTVLLK 741
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 179/405 (44%), Gaps = 15/405 (3%)
Query: 110 LASKFINAFGDRGDIRGAIHWFHKAKAS---GPCALSCNAVLGVLVRANRVNLAKAIYDQ 166
+++ + A+ + AI F +A S P + N ++ ++ + R ++ + +
Sbjct: 148 VSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWE 207
Query: 167 VVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPN---AITYNTMIHGLCKKG 223
+ + L + D TY +++ + E K+ + + Y I GLC
Sbjct: 208 IERLGL-DADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQ 266
Query: 224 EMDGAMRVFN--RFAESKSCRPDV-VTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNV 280
D A + R A + D+ + + ++ G +++A + + +M++ G P+V
Sbjct: 267 MTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDV 326
Query: 281 VTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKE 340
Y+A+IEG + N+ +A + +KM K + N +S+L+ +C +G EA KE
Sbjct: 327 YVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKE 386
Query: 341 MVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERK 400
+ LD Y+V + K+GK EA+ + REM K + P V ++ + + K
Sbjct: 387 FRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGK 446
Query: 401 LEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYN 460
+A L+ M G +P+ + Y+++ GL G Q E + M G +N
Sbjct: 447 CSDAFDLMIEMDGTGKTPDIVIYNVLAGGLA-TNGLAQEAFETLKMMENRGVKPTYVTHN 505
Query: 461 CLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKG 505
++ G + G+ + A + Y+ ++ +++ + VK CA G
Sbjct: 506 MVIEGLIDAGELDKA-EAFYESLEHK---SRENDASMVKGFCAAG 546
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 162/384 (42%), Gaps = 57/384 (14%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMG------- 191
P ++ N V+ L+ A ++ A+A Y+ + ++ E D +M++GFC G
Sbjct: 499 PTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSR-END----ASMVKGFCAAGCLDHAFE 553
Query: 192 --------------------------MVESARKVFDEMR---CEPNAITYNTMIHGLCKK 222
+ A+ + D M EP Y +I C+
Sbjct: 554 RFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRV 613
Query: 223 GEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVT 282
+ A R F +K PD+ T+T +I+ Y + E ++A ++M+ + +P+VVT
Sbjct: 614 NNVRKA-REFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVT 672
Query: 283 YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
Y+ L+ N D M +M + +V T M+ +C + ++ K+M
Sbjct: 673 YSVLL-------NSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMK 725
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLE 402
R + DV Y+V++ KP +S REM A +KP V + + L
Sbjct: 726 RREIVPDVVTYTVLLK-----NKPERNLS--REMKAFDVKPDVFYYTVLIDWQCKIGDLG 778
Query: 403 EAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCL 462
EA + M G P+ Y+ +I CK+ G ++ + + M++SG D Y L
Sbjct: 779 EAKRIFDQMIESGVDPDAAPYTALIACCCKM-GYLKEAKMIFDRMIESGVKPDVVPYTAL 837
Query: 463 LGGYCEDGDEEMALKTVYDMIDKS 486
+ G C +G A+K V +M++K
Sbjct: 838 IAGCCRNGFVLKAVKLVKEMLEKG 861
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/456 (20%), Positives = 174/456 (38%), Gaps = 76/456 (16%)
Query: 116 NAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALV 173
+A G G + AI F + G P ++ ++G + + A +D +++
Sbjct: 404 DALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDA---FDLMIEMDGT 460
Query: 174 --EPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGA 228
PD+ Y + G G+ + A + M +P +T+N +I GL GE+D A
Sbjct: 461 GKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA 520
Query: 229 M----------------------------RVFNRFAESKSCRPDVVTFTTLIDGYSKRGE 260
F RF + P V FT +++
Sbjct: 521 EAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDY 580
Query: 261 VQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTS 320
+ +A + + M + G +P Y LI C NV +A+ + K I ++ T T
Sbjct: 581 ISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTI 640
Query: 321 MLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVI------------------------ 356
M+ +C + ++A ++M R + DV YSV+
Sbjct: 641 MINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVY 700
Query: 357 ----VNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
+N YC + + ++ ++M + + P V ++ + + ER L + M
Sbjct: 701 YTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-KPERNLS------REMK 753
Query: 413 RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDE 472
P+ Y+++I CK+ G + + + M++SG + DA Y L+ C+ G
Sbjct: 754 AFDVKPDVFYYTVLIDWQCKI-GDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYL 812
Query: 473 EMALKTVYD-MIDKSFLFNKDTYCTFVKELCAKGKV 507
+ A K ++D MI+ + Y + C G V
Sbjct: 813 KEA-KMIFDRMIESGVKPDVVPYTALIAGCCRNGFV 847
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 190/443 (42%), Gaps = 42/443 (9%)
Query: 31 LKKFSCYLTPSLVTQVIKNTHNPHHALF-FFNWASNPQPNPNNYSHPRSCYAAITDVLLS 89
L + S LT +V ++++ F FF WA + + +YSH Y + D+L S
Sbjct: 116 LDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQE----HYSHEPIAYNEMIDILSS 171
Query: 90 ----HSLFSTADSLL---RRSNK---LSDFLAS----------KFINAFGDRGDIRGAIH 129
+ F +L +R+NK L D L + F R IR
Sbjct: 172 TKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFAKRKRIRVK-- 229
Query: 130 WFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCK 189
+ P + N +L L + V +A+ ++ V+PD T+ + G+C+
Sbjct: 230 -------TQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR--VKPDANTFNVLFFGWCR 280
Query: 190 MGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSC--RPD 244
+ + A K+ +EM +P TY I C+ G +D A +F+ S P
Sbjct: 281 VRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPT 340
Query: 245 VVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMS 304
TF +I +K + +E + M GC P+V TY +IEG+C++ VDEA + +
Sbjct: 341 AKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLD 400
Query: 305 KMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIG 364
+M KG ++ T L+ C +++EA+K MV V+ Y+++++ + ++
Sbjct: 401 EMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMD 460
Query: 365 KPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYS 424
P A + EM + V ++ A+ L + +EA LL+ + G + +
Sbjct: 461 DPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFD 520
Query: 425 IVICGLCKVKGRMQLVEELVSSM 447
+ L +V G ++ + ++ M
Sbjct: 521 SFLMRLSEV-GNLKAIHKVSEHM 542
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 132/333 (39%), Gaps = 49/333 (14%)
Query: 180 YTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESK 239
Y T ++ F K + ++ +P +N ++ LCK G + + R
Sbjct: 213 YLTHVQKFAKRKRIR--------VKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR- 263
Query: 240 SCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEA 299
+PD TF L G+ + + ++A+ ++EM E G +P TY A I+ C +G VDEA
Sbjct: 264 -VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEA 322
Query: 300 KRMMSKMRLKGIKDNVATNTS---MLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVI 356
+ M KG + T + M+ ++EE + + M+S G DV Y +
Sbjct: 323 ADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDV 382
Query: 357 VNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGC 416
+ C K EA L EM K P + ++N RVL RK +EA+ L M C
Sbjct: 383 IEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRC 442
Query: 417 SPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMAL 476
+P+ YN L+ + E D + A
Sbjct: 443 APS------------------------------------VQTYNMLISMFFEMDDPDGAF 466
Query: 477 KTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
T +M + + + +TYC + L + KE
Sbjct: 467 NTWTEMDKRDCVQDVETYCAMINGLFDCHRAKE 499
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 154 ANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAI 210
A +V+ A D++ + PD+ TY +R C+ + A K++ M RC P+
Sbjct: 389 AEKVDEAYKFLDEMSNKGY-PPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQ 447
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAE--SKSCRPDVVTFTTLIDGYSKRGEVQEALNCM 268
TYN +I + + DGA FN + E + C DV T+ +I+G +EA +
Sbjct: 448 TYNMLISMFFEMDDPDGA---FNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLL 504
Query: 269 KEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR 307
+E+ +G + +++ + L GN+ ++ M+
Sbjct: 505 EEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMK 543
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 106/245 (43%), Gaps = 22/245 (8%)
Query: 281 VTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN------VATNTSMLKGFCMVGRSEEA 334
+ YN +I+ L + ++ R++ M L +K N V +L+ +C E
Sbjct: 160 IAYNEMIDILSSTKYKNKQFRIVIDM-LDYMKRNNKTVVLVDVLLEILRKYC-----ERY 213
Query: 335 IKHMKEMVSRG-----MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFN 389
+ H+++ R ++ A++++++ CK G E ++LR M R+KP ++FN
Sbjct: 214 LTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFN 272
Query: 390 AVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
+F R ++A+ LL+ M G P +Y I C+ G + +L M+
Sbjct: 273 VLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQA-GMVDEAADLFDFMIT 331
Query: 450 SGHNLDA---TMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGK 506
G + A + ++ ++ E + + MI L + TY ++ +C K
Sbjct: 332 KGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEK 391
Query: 507 VKEEY 511
V E Y
Sbjct: 392 VDEAY 396
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 149/303 (49%), Gaps = 12/303 (3%)
Query: 154 ANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVF----DEMRCEPNA 209
A++V+ A ++++ KE ++ D+ + ++ C+ VE A +F E C+ A
Sbjct: 191 AHKVDEAVGVFERR-KEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKA 249
Query: 210 ITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK 269
+ N +++G C G + A R + SK CRPDVV++ T+I+ +K+G++ +A+ +
Sbjct: 250 M--NMILNGWCVLGNVHEAKRFWKDIIASK-CRPDVVSYGTMINALTKKGKLGKAMELYR 306
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG 329
M + P+V N +I+ LC + EA + ++ KG NV T S+LK C +
Sbjct: 307 AMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIR 366
Query: 330 RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSS-F 388
R+E+ + ++EM +G V + K + S+ V I+ E +AK S +
Sbjct: 367 RTEKVWELVEEMELKGG--SCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLY 424
Query: 389 NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
N +FR+ V K E+ + M R G P+ +Y+I I GL KG++ M+
Sbjct: 425 NLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGL-HTKGKIGEALSYFQEMM 483
Query: 449 QSG 451
G
Sbjct: 484 SKG 486
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 192/421 (45%), Gaps = 32/421 (7%)
Query: 112 SKFINAFGDRGDIRGAI---HWFHKAKASGP---------CALSCNAVLGV-LVRANRVN 158
KF N F D D + A+ + + S P C + L + +V NR +
Sbjct: 63 DKFPNRFNDDKDKQSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSD 122
Query: 159 LAKA-IYDQ-VVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEP---NAITYN 213
A I Q VVK+++ Y ++ KM E +VFDEM N TY
Sbjct: 123 WKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYE 182
Query: 214 TMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY--SKRGEVQEALNCMKEM 271
+++ ++D A+ VF R E D+V F L+ K E E L C +
Sbjct: 183 VLLNRYAAAHKVDEAVGVFERRKEF-GIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRR- 240
Query: 272 QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRS 331
+E GC ++ N ++ G C+ GNV EAKR + + +V + +M+ G+
Sbjct: 241 REFGC--DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKL 298
Query: 332 EEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAV 391
+A++ + M + DVK + +++ C + EA+ + RE+ K P+V ++N++
Sbjct: 299 GKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSL 358
Query: 392 FRVLVAERKLEEAVLLLKNMPRMG--CSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
+ L R+ E+ L++ M G CSPN +++S L K R + V+ ++ M +
Sbjct: 359 LKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSY----LLKYSQRSKDVDIVLERMAK 414
Query: 450 SGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF-NKDTYCTFVKELCAKGKVK 508
+ + + +YN + Y + D+E ++ ++ +++S L ++ TY + L KGK+
Sbjct: 415 NKCEMTSDLYNLMFRLYVQ-WDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIG 473
Query: 509 E 509
E
Sbjct: 474 E 474
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 154/348 (44%), Gaps = 46/348 (13%)
Query: 80 YAAITDVLLSHSLFSTADSLLRRSNKLSDFLASK----FINAFGDRGDIRGAIHWFHKAK 135
Y I DVL F + +K F+ K +N + + A+ F + K
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 136 ASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMV 193
G ++ + +L L R V A+ ++ +E D+ ++ G+C +G V
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRRE--FGCDIKAMNMILNGWCVLGNV 263
Query: 194 ESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTT 250
A++ + ++ +C P+ ++Y TMI+ L KKG++ AM ++ +++ PDV
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRR-NPDVKICNN 322
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG 310
+ID + + EAL +E+ E+G PNVVTYN+L++ LC ++ ++ +M LKG
Sbjct: 323 VIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 311 -------------------------IKDNVATN----TS-----MLKGFCMVGRSEEAIK 336
+ + +A N TS M + + + E+ +
Sbjct: 383 GSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVRE 442
Query: 337 HMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPS 384
EM G+ D + Y++ ++ GK EA+S +EM++K M P
Sbjct: 443 IWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 182/400 (45%), Gaps = 17/400 (4%)
Query: 95 TADSLLRRSNKLSDFLASKFINAFGDRGDIR---GAIHWFHKAKASGPCALSCNAVLGVL 151
++D + +R N LSD L K ++ F R D R G + W K + + + + +L
Sbjct: 75 SSDEICKRVN-LSDGLVHKLLHRF--RDDWRSALGILKWAESCKGHKHSSDAYDMAVDIL 131
Query: 152 VRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD---EMRCEPN 208
+A + + K +++ + LV + T ++R F G E A +FD E E N
Sbjct: 132 GKAKKWDRMKEFVERMRGDKLVTLN--TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKN 189
Query: 209 AITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM 268
+ N ++ LCK+ ++ A V + + P+ TF I G+ K V+EAL +
Sbjct: 190 TESMNLLLDTLCKEKRVEQARVVLLQLKSHIT--PNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 269 KEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMV 328
+EM+ G +P V++Y +I C + M+S+M G N T T+++
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQ 307
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR-EMVAKRMKPSVSS 387
EEA++ M G D Y+ +++ + G+ EA + R EM + + S+
Sbjct: 308 KEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTST 367
Query: 388 FNAVFRVLVAERKLEEAVLLLKNMPRMG-CSPNFLSYSIVICGLCKVKGRMQLVEELVSS 446
+N++ + + ++A+ LLK M C+P+ +Y ++ C +G + V +L+
Sbjct: 368 YNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRS-CFKRGDVVEVGKLLKE 426
Query: 447 MLQSGH-NLDATMYNCLLGGYCEDGDEEMALKTVYDMIDK 485
M+ H +LD + Y L+ C E A +MI +
Sbjct: 427 MVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 135/266 (50%), Gaps = 6/266 (2%)
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
T ++ ++ GE +EA+ + E G + N + N L++ LC V++A+ ++ ++
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP 366
+ I N T + G+C R EEA+ ++EM G V +Y+ I+ YC+ +
Sbjct: 217 K-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 367 SEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
+ +L EM A P+ ++ + L A+++ EEA+ + M R GC P+ L Y+ +
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 427 ICGLCKVKGRMQLVEELVS-SMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDK 485
I L + GR++ E + M + G +++ + YN ++ YC +E+ A++ + +M +
Sbjct: 336 IHTLARA-GRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEM-ES 393
Query: 486 SFLFNKD--TYCTFVKELCAKGKVKE 509
S L N D TY ++ +G V E
Sbjct: 394 SNLCNPDVHTYQPLLRSCFKRGDVVE 419
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 182/400 (45%), Gaps = 17/400 (4%)
Query: 95 TADSLLRRSNKLSDFLASKFINAFGDRGDIR---GAIHWFHKAKASGPCALSCNAVLGVL 151
++D + +R N LSD L K ++ F R D R G + W K + + + + +L
Sbjct: 75 SSDEICKRVN-LSDGLVHKLLHRF--RDDWRSALGILKWAESCKGHKHSSDAYDMAVDIL 131
Query: 152 VRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD---EMRCEPN 208
+A + + K +++ + LV + T ++R F G E A +FD E E N
Sbjct: 132 GKAKKWDRMKEFVERMRGDKLVTLN--TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKN 189
Query: 209 AITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM 268
+ N ++ LCK+ ++ A V + + P+ TF I G+ K V+EAL +
Sbjct: 190 TESMNLLLDTLCKEKRVEQARVVLLQLKSHIT--PNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 269 KEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMV 328
+EM+ G +P V++Y +I C + M+S+M G N T T+++
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQ 307
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR-EMVAKRMKPSVSS 387
EEA++ M G D Y+ +++ + G+ EA + R EM + + S+
Sbjct: 308 KEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTST 367
Query: 388 FNAVFRVLVAERKLEEAVLLLKNMPRMG-CSPNFLSYSIVICGLCKVKGRMQLVEELVSS 446
+N++ + + ++A+ LLK M C+P+ +Y ++ C +G + V +L+
Sbjct: 368 YNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRS-CFKRGDVVEVGKLLKE 426
Query: 447 MLQSGH-NLDATMYNCLLGGYCEDGDEEMALKTVYDMIDK 485
M+ H +LD + Y L+ C E A +MI +
Sbjct: 427 MVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 135/266 (50%), Gaps = 6/266 (2%)
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
T ++ ++ GE +EA+ + E G + N + N L++ LC V++A+ ++ ++
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP 366
+ I N T + G+C R EEA+ ++EM G V +Y+ I+ YC+ +
Sbjct: 217 K-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 367 SEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
+ +L EM A P+ ++ + L A+++ EEA+ + M R GC P+ L Y+ +
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 427 ICGLCKVKGRMQLVEELVS-SMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDK 485
I L + GR++ E + M + G +++ + YN ++ YC +E+ A++ + +M +
Sbjct: 336 IHTLARA-GRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEM-ES 393
Query: 486 SFLFNKD--TYCTFVKELCAKGKVKE 509
S L N D TY ++ +G V E
Sbjct: 394 SNLCNPDVHTYQPLLRSCFKRGDVVE 419
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 146/335 (43%), Gaps = 35/335 (10%)
Query: 80 YAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGP 139
Y+A L FST D +L+ K D + F+ IR + + + A
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFV--------IRIMLLYGYSGMAEH- 140
Query: 140 CALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKV 199
A ++D++ E E V ++ ++ + ++ A K
Sbjct: 141 --------------------AHKLFDEM-PELNCERTVKSFNALLSAYVNSKKLDEAMKT 179
Query: 200 FDEMR----CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
F E+ P+ +TYNTMI LC+KG MD + +F E PD+++F TL++ +
Sbjct: 180 FKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEEL-EKNGFEPDLISFNTLLEEF 238
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+R E M+ + PN+ +YN+ + GL + +A ++ M+ +GI +V
Sbjct: 239 YRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDV 298
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T +++ + + EE +K EM +G+ D Y +++ CK G AV + E
Sbjct: 299 HTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKN 410
+ ++ + + V L+ K++EA L+KN
Sbjct: 359 AIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKN 393
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 135/286 (47%), Gaps = 6/286 (2%)
Query: 225 MDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
+D ++ +F + KS D V L+ GYS G + A EM E C+ V ++N
Sbjct: 106 IDEVLQYQKKFDDIKS--EDFVIRIMLLYGYS--GMAEHAHKLFDEMPELNCERTVKSFN 161
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLK-GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVS 343
AL+ S +DEA + ++ K GI ++ T +M+K C G ++ + +E+
Sbjct: 162 ALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEK 221
Query: 344 RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEE 403
G + D+ +++ ++ E+ + E I M +K + P++ S+N+ R L +K +
Sbjct: 222 NGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTD 281
Query: 404 AVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLL 463
A+ L+ M G SP+ +Y+ +I +V ++ V + + M + G D Y L+
Sbjct: 282 ALNLIDVMKTEGISPDVHTYNALITAY-RVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLI 340
Query: 464 GGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
C+ GD + A++ + I L + Y V+ L GK+ E
Sbjct: 341 PLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDE 386
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
I A +G + + F + + +G P +S N +L R I+D ++K
Sbjct: 200 IKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWD-LMKSKN 258
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAM 229
+ P++ +Y + +RG + A + D M+ E P+ TYN +I ++ M
Sbjct: 259 LSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVM 318
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQG--CQPNVVTYNALI 287
+ +N E K PD VT+ LI K+G++ A+ +E + +PN+ Y ++
Sbjct: 319 KCYNEMKE-KGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM--YKPVV 375
Query: 288 EGLCLSGNVDEAKRMMSKMRLK 309
E L +G +DEA +++ +L+
Sbjct: 376 ERLMGAGKIDEATQLVKNGKLQ 397
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 167/366 (45%), Gaps = 19/366 (5%)
Query: 38 LTPSLVTQVIKNT-HNPHHALFFFNWA-SNPQPNPNNYSHPRSCYAAITDVLLSHSLFST 95
+T V +V++ T + + +L FFNWA SNP P + Y + L SH + +
Sbjct: 75 VTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSME-----YEELAKSLASHKKYES 129
Query: 96 ADSLLRRSNKLSDFLASK----FINAFGDRGDIRGAIHWFHKAKASGPCALSC---NAVL 148
+L++ LS ++ + I +G G + A+ F+ + C + N++L
Sbjct: 130 MWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLL 189
Query: 149 GVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---C 205
L + A A+ +++++ L +PD TY ++ G+C G ++ A++ DEM
Sbjct: 190 HALCDVKMFHGAYALIRRMIRKGL-KPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGF 248
Query: 206 EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL 265
P A + +I GL G ++ A + ++ + PD+ TF LI+ SK GEV+ +
Sbjct: 249 NPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFV-PDIQTFNILIEAISKSGEVEFCI 307
Query: 266 NCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGF 325
+ G ++ TY LI + G +DEA R+++ G K + ++KG
Sbjct: 308 EMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGM 367
Query: 326 CMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSV 385
C G ++A +M + + Y++++ + GK +A + L EM + P
Sbjct: 368 CRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPIS 427
Query: 386 SSFNAV 391
F+ V
Sbjct: 428 RCFDMV 433
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 133/299 (44%), Gaps = 6/299 (2%)
Query: 183 MIRGFCKMGMVESARKVFD----EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAES 238
+I + K G V+ A ++F+ + C+ YN+++H LC GA + R
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIR- 210
Query: 239 KSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDE 298
K +PD T+ L++G+ G+++EA + EM +G P + LIEGL +G ++
Sbjct: 211 KGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLES 270
Query: 299 AKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVN 358
AK M+SKM G ++ T +++ G E I+ G+ +D+ Y ++
Sbjct: 271 AKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIP 330
Query: 359 EYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSP 418
KIGK EA +L V KP S + + + + ++A +M P
Sbjct: 331 AVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPP 390
Query: 419 NFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALK 477
N Y+++I +C G+ + M + G + ++ + G G ++A++
Sbjct: 391 NRPVYTMLIT-MCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMR 448
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 120/260 (46%), Gaps = 3/260 (1%)
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQ-GCQPNVVTYNALIEGLCLSGNVDEAKRMMSK 305
T +I+ Y K G V +A+ + + GCQ V YN+L+ LC A ++ +
Sbjct: 148 TLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRR 207
Query: 306 MRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGK 365
M KG+K + T ++ G+C G+ +EA + + EM RG + + +++ G
Sbjct: 208 MIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGY 267
Query: 366 PSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSI 425
A ++ +M P + +FN + + ++E + + ++G + +Y
Sbjct: 268 LESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKT 327
Query: 426 VICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDK 485
+I + K+ G++ L+++ ++ GH ++Y ++ G C +G + A DM K
Sbjct: 328 LIPAVSKI-GKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVK 386
Query: 486 SFLFNKDTYCTFVKELCAKG 505
+ N+ Y T + +C +G
Sbjct: 387 AHPPNRPVY-TMLITMCGRG 405
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 118/294 (40%), Gaps = 39/294 (13%)
Query: 228 AMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
++R FN + S P + + L + + + +K+M++ + T +I
Sbjct: 94 SLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFII 153
Query: 288 EGLCLSGNVDEAKRMMSKM-RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
E +G+VD+A + + + + G + V S+L C
Sbjct: 154 EQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALC-------------------- 193
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
DVK + A +++R M+ K +KP ++ + + K++EA
Sbjct: 194 --DVKMFH-------------GAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQE 238
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGY 466
L M R G +P ++I GL G ++ +E+VS M + G D +N L+
Sbjct: 239 FLDEMSRRGFNPPARGRDLLIEGLLNA-GYLESAKEMVSKMTKGGFVPDIQTFNILIEAI 297
Query: 467 CEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY--LKRCVDN 518
+ G+ E ++ Y + DTY T + + GK+ E + L CV++
Sbjct: 298 SKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVED 351
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 130/256 (50%), Gaps = 5/256 (1%)
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKE 270
T+N +I L K E + + + NR + P+ VTF + Y VQEA++ +
Sbjct: 83 TFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDK 142
Query: 271 MQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIK---DNVATNTSMLKGFCM 327
+ + + YN L++ LC +V EA+ + + G N + +L+G+
Sbjct: 143 LDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSK 201
Query: 328 VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSS 387
+G + ++ K+M + G+ D+ +YS+ ++ CK GKP +AV + +EM ++RMK V +
Sbjct: 202 LGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVA 261
Query: 388 FNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM 447
+N V R + A + +E + + + M GC PN +++ +I LC+ GRM+ ++ M
Sbjct: 262 YNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCE-DGRMRDAYRMLDEM 320
Query: 448 LQSGHNLDATMYNCLL 463
+ G D+ Y CL
Sbjct: 321 PKRGCQPDSITYMCLF 336
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/438 (20%), Positives = 185/438 (42%), Gaps = 48/438 (10%)
Query: 4 AVRKATVKPSSIVTTITSLLQTPDSEPLKKFSCYLTPSLVTQVIKNTHNPHHALFFFNWA 63
+VR +VKP S V Q + + S Y ++ + +++ AL FFNW
Sbjct: 17 SVRLLSVKPISNVDDAKFRSQEEEDQ-----SSYDQKTVCEALTCYSNDWQKALEFFNWV 71
Query: 64 SNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRR------------------SNK 105
+ + H + + D+L + F + +L+ R
Sbjct: 72 ERE----SGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRY 127
Query: 106 LSDFLASKFINAFG--DRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAI 163
++ L + I+A+ D ++R +++ A C +V A + K
Sbjct: 128 VTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDAL------CEH--KHVVEAEELCFGK-- 177
Query: 164 YDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLC 220
V+ + + ++RG+ K+G ++ + +M E + +Y+ + +C
Sbjct: 178 --NVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMC 235
Query: 221 KKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNV 280
K G+ A++++ +S+ + DVV + T+I V+ + +EM+E+GC+PNV
Sbjct: 236 KSGKPWKAVKLYKEM-KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNV 294
Query: 281 VTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKE 340
T+N +I+ LC G + +A RM+ +M +G + + T + F + + E +
Sbjct: 295 ATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGR 351
Query: 341 MVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERK 400
M+ G+ + Y +++ ++ + G + + + M P +++NAV L+ +
Sbjct: 352 MIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGM 411
Query: 401 LEEAVLLLKNMPRMGCSP 418
L+ A + M G SP
Sbjct: 412 LDMAREYEEEMIERGLSP 429
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/369 (18%), Positives = 165/369 (44%), Gaps = 18/369 (4%)
Query: 128 IHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGF 187
+W + + N V+ +L + ++ A+ ++++ P+ T+ + + +
Sbjct: 68 FNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRY 127
Query: 188 CKMGMVESARKVFDEMR--CEPNAITYNTMIHGLCKKGEMD-------GAMRVFNRFAES 238
+V+ A +D++ + ++ ++ LC+ + G + N F+ S
Sbjct: 128 VTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVS 187
Query: 239 KSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDE 298
+ +++ + G+SK G + K+M +G ++ +Y+ ++ +C SG +
Sbjct: 188 NTKIHNLI-----LRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWK 242
Query: 299 AKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVN 358
A ++ +M+ + +K +V ++++ E I+ +EM RG + +V ++ I+
Sbjct: 243 AVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIK 302
Query: 359 EYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSP 418
C+ G+ +A +L EM + +P ++ +F L K E + L M R G P
Sbjct: 303 LLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRL---EKPSEILSLFGRMIRSGVRP 359
Query: 419 NFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKT 478
+Y +++ + G +Q V + +M +SG D+ YN ++ + G +MA +
Sbjct: 360 KMDTYVMLMRKFERW-GFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREY 418
Query: 479 VYDMIDKSF 487
+MI++
Sbjct: 419 EEEMIERGL 427
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 118/503 (23%), Positives = 215/503 (42%), Gaps = 89/503 (17%)
Query: 39 TPSLVTQVIKNTHNPHHALFFFNWASNPQPN--------------------PNNYSHPRS 78
TP ++++K+ ++P A+ FF + P P+ + RS
Sbjct: 98 TPDEASEILKSLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRS 157
Query: 79 ---------CYAAITDVLLSHSLFSTADSL---LRRSN----KLSDFLASKFINAFGDRG 122
+ I+ V + F + L LR K++ F + A+
Sbjct: 158 ILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSR 217
Query: 123 DIRGAIHWFHKAKASGPC--ALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTY 180
D A + + + G + N +L L + + A +++ +K+ D +TY
Sbjct: 218 DYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK---ACQVFED-MKKRHCRRDEYTY 273
Query: 181 TTMIRGFCKMGMVESARKVFDEMRCEP---NAITYNTMIHGLCKKGEMDGAMRVFNRFAE 237
T MIR ++G + A +F+EM E N + YNT++ L K +D A++VF+R E
Sbjct: 274 TIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVE 333
Query: 238 SKSCRPDVVTFTTL------------IDG--------------------YSKRGEVQEAL 265
+ CRP+ T++ L +DG SK G V EA
Sbjct: 334 T-GCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAH 392
Query: 266 NCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKG- 324
+M + +Y +++E LC +G EA M+SK+ KG V T+T M
Sbjct: 393 RLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKG----VVTDTMMYNTV 448
Query: 325 FCMVGRSEEAIKHMKEMVSR----GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKR 380
F +G+ ++ I H+ ++ + G D+ Y++++ + ++G+ EA++I E+
Sbjct: 449 FSALGKLKQ-ISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSD 507
Query: 381 MKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLV 440
KP + S+N++ L ++EA + K M G +P+ ++YS ++ K + R+++
Sbjct: 508 CKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTE-RVEMA 566
Query: 441 EELVSSMLQSGHNLDATMYNCLL 463
L ML G + YN LL
Sbjct: 567 YSLFEEMLVKGCQPNIVTYNILL 589
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 151/357 (42%), Gaps = 72/357 (20%)
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEMRCEP---NAITYNTMIHGLCKKGEMDGAMRVF 232
D +TYT MIR ++G + A +F+EM E N + YNT++ L K +D A++VF
Sbjct: 269 DEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVF 328
Query: 233 NRFAESKSCRPDVVTFTTLI------------DG--------------------YSKRGE 260
+R E+ CRP+ T++ L+ DG SK G
Sbjct: 329 SRMVET-GCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGH 387
Query: 261 VQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI--------- 311
V EA +M + +Y +++E LC +G EA M+SK+ KG+
Sbjct: 388 VSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNT 447
Query: 312 ----------------------KD----NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG 345
KD ++ T ++ F VG +EAI +E+
Sbjct: 448 VFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSD 507
Query: 346 MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAV 405
D+ +Y+ ++N K G EA +EM K + P V +++ + ++E A
Sbjct: 508 CKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAY 567
Query: 406 LLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCL 462
L + M GC PN ++Y+I++ L K GR +L S M Q G D+ Y L
Sbjct: 568 SLFEEMLVKGCQPNIVTYNILLDCLEK-NGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 117/220 (53%), Gaps = 6/220 (2%)
Query: 179 TYTTMIRGFCKMGMVESARKVFDEMRCEPNAIT----YNTMIHGLCKKGEMDGAMRVFNR 234
+Y +M+ C G A ++ ++ E +T YNT+ L K ++ +F +
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIH-EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 235 FAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSG 294
+ PD+ T+ LI + + GEV EA+N +E++ C+P++++YN+LI L +G
Sbjct: 468 MKKDGPS-PDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNG 526
Query: 295 NVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYS 354
+VDEA +M+ KG+ +V T +++++ F R E A +EM+ +G ++ Y+
Sbjct: 527 DVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYN 586
Query: 355 VIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRV 394
++++ K G+ +EAV + +M + + P ++ + R+
Sbjct: 587 ILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERL 626
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 119/251 (47%), Gaps = 7/251 (2%)
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
G ++ C++ +++ + N TY L++ S + +A + ++R G K ++
Sbjct: 182 GNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAY 241
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
+L + + E+A + ++M R D Y++++ +IGK EAV + EM+
Sbjct: 242 NMLLDA---LAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMIT 298
Query: 379 KRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQ 438
+ + +V +N + +VL + +++A+ + M GC PN +YS+++ L +G++
Sbjct: 299 EGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLL-NLLVAEGQLV 357
Query: 439 LVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
++ +V S + +Y+ L+ + G A + DM +D+Y + +
Sbjct: 358 RLDGVVEI---SKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSML 414
Query: 499 KELCAKGKVKE 509
+ LC GK E
Sbjct: 415 ESLCGAGKTIE 425
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 194/424 (45%), Gaps = 29/424 (6%)
Query: 81 AAITDVLLSHSLFSTADSLL----RRSNKLSDFLASK-FINAFGDRGDIRGAIHWFHKAK 135
AA+ DV L+ A+++ S + +D L I A+G A+ F K
Sbjct: 483 AAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMK 542
Query: 136 ASGPCALSC--NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMV 193
G C N++ +L + V+ A+ I +++ +P TY MI + ++G++
Sbjct: 543 NQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSG-CKPGCKTYAAMIASYVRLGLL 601
Query: 194 ESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTT 250
A +++ M +PN + Y ++I+G + G ++ A++ F R E + + + T+
Sbjct: 602 SDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYF-RMMEEHGVQSNHIVLTS 660
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS-GNVDEAKRMMSKMRLK 309
LI YSK G ++EA +M++ P+V N+++ LC G V EA+ + + +R K
Sbjct: 661 LIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML-SLCADLGIVSEAESIFNALREK 719
Query: 310 GIKD--NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPS 367
G D + AT + KG M+ +EAI+ +EM G+ D +++ ++ Y G+ S
Sbjct: 720 GTCDVISFATMMYLYKGMGML---DEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLS 776
Query: 368 EAVSILREMVAKR-MKPSVSSFNAVFRVLVAERKLEEAVLLLK---NMPRMGCSPNFLSY 423
E + EM+ +R + +F +F +L EAV L+ N + +P +
Sbjct: 777 ECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITAT 836
Query: 424 SIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMI 483
GL ++ +EL S + H YN ++ Y GD +MALK M
Sbjct: 837 LFSAMGLYAYA--LESCQELTSGEIPREH----FAYNAVIYTYSASGDIDMALKAYMRMQ 890
Query: 484 DKSF 487
+K
Sbjct: 891 EKGL 894
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 202/466 (43%), Gaps = 48/466 (10%)
Query: 89 SHSLFSTADSLLRRSNKLSDFLASKFINAF----GDRGDIRGAIHWFHKAKASG--PCAL 142
+H S A+SLL++ + +K N D GDI A+ ++ K + G P +
Sbjct: 352 THGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTV 411
Query: 143 SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD- 201
+ AVL +L + V +A+ ++ + + + D + +++ + G+V A+ +F+
Sbjct: 412 THRAVLHILCQRKMVAEVEAVIAEMDRNS-IRIDEHSVPVIMQMYVNEGLVVQAKALFER 470
Query: 202 -EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGE 260
++ C ++ T +I +KG A VF R DV+ + +I Y K
Sbjct: 471 FQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKL 530
Query: 261 VQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM-------------- 306
++AL+ K M+ QG P+ TYN+L + L VDEA+R++++M
Sbjct: 531 HEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAA 590
Query: 307 ------RL---------------KGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG 345
RL G+K N S++ GF G EEAI++ + M G
Sbjct: 591 MIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHG 650
Query: 346 MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAV 405
+ + + ++ Y K+G EA + +M P V++ N++ + + EA
Sbjct: 651 VQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAE 710
Query: 406 LLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGG 465
+ + G + +S++ ++ L K G + E+ M +SG D T +N ++
Sbjct: 711 SIFNALREKGTC-DVISFATMMY-LYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMAC 768
Query: 466 YCEDGDEEMALKTVYDM-IDKSFLFNKDTYCTFVKELCAKGKVKEE 510
Y DG + ++M +++ L + T+ T L KG V E
Sbjct: 769 YAADGQLSECCELFHEMLVERKLLLDWGTFKTLFT-LLKKGGVPSE 813
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 150/370 (40%), Gaps = 74/370 (20%)
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRP-DVVTFTTLIDGYSKRGEVQEALNCMK 269
T+NT+I K G ++ A +F+ KS P D VTF T+I G + EA + +K
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEML--KSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC--- 326
+M+E+G P+ TYN L+ +G+++ A K+R G+ + T+ ++L C
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 327 MVGRSEEAIKHMKE----------------MVSRGMDLDVKA---------------YSV 355
MV E I M V+ G+ + KA +
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAA 484
Query: 356 IVNEYCKIGKPSEAVSIL---REMVAKR----------------------------MK-- 382
+++ Y + G EA ++ R M +R MK
Sbjct: 485 VIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQ 544
Query: 383 ---PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
P ++N++F++L ++EA +L M GC P +Y+ +I ++ G +
Sbjct: 545 GTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRL-GLLSD 603
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
+L +M ++G + +Y L+ G+ E G E A++ M + N + +K
Sbjct: 604 AVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIK 663
Query: 500 ELCAKGKVKE 509
G ++E
Sbjct: 664 AYSKVGCLEE 673
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/437 (20%), Positives = 163/437 (37%), Gaps = 59/437 (13%)
Query: 130 WFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCK 189
+F ++ P + N VL L RA + + + + ++ ++ P TY ++ + K
Sbjct: 134 FFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVL-PTNNTYGMLVDVYGK 192
Query: 190 MGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFN------------- 233
G+V+ A M P+ +T T++ GE D A R F
Sbjct: 193 AGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDS 252
Query: 234 -------------------------------------RFAESKSCRPD----VVTFTTLI 252
FA P TF TLI
Sbjct: 253 IDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLI 312
Query: 253 DGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIK 312
D Y K G + +A N EM + G + VT+N +I G++ EA+ ++ KM KGI
Sbjct: 313 DLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGIS 372
Query: 313 DNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSI 372
+ T +L G E A+++ +++ G+ D + +++ C+ +E ++
Sbjct: 373 PDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAV 432
Query: 373 LREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCK 432
+ EM ++ S + ++ V E + +A L + ++ C + + + VI +
Sbjct: 433 IAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERF-QLDCVLSSTTLAAVIDVYAE 491
Query: 433 VKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKD 492
++ SG D YN ++ Y + E AL M ++ ++
Sbjct: 492 KGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDEC 551
Query: 493 TYCTFVKELCAKGKVKE 509
TY + + L V E
Sbjct: 552 TYNSLFQMLAGVDLVDE 568
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 129/306 (42%), Gaps = 31/306 (10%)
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
+RVF F +S P+V+ + ++ + G+ E C EM G P TY L++
Sbjct: 129 LRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVD 188
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
+G V EA + M + + T ++++ F G + A + K + +DL
Sbjct: 189 VYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDL 248
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSI------------LREMVAKRM-----------KPSV 385
D+ + ++++ K G V++ R + K + KP +
Sbjct: 249 DLDS----IDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRL 304
Query: 386 -SSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELV 444
S+FN + + +L +A L M + G + ++++ +I C G + E L+
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMI-HTCGTHGHLSEAESLL 363
Query: 445 SSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF-NKDTYCTFVKELCA 503
M + G + D YN LL + + GD E AL+ Y I K LF + T+ + LC
Sbjct: 364 KKMEEKGISPDTKTYNILLSLHADAGDIEAALE-YYRKIRKVGLFPDTVTHRAVLHILCQ 422
Query: 504 KGKVKE 509
+ V E
Sbjct: 423 RKMVAE 428
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 155/343 (45%), Gaps = 15/343 (4%)
Query: 40 PSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSL 99
PSL+T ++ + +P F A + N + Y L + F + +
Sbjct: 39 PSLIT-LVNDERDPKFITEKFKKACQAEWFRKNIA----VYERTVRRLAAAKKFEWVEEI 93
Query: 100 LRRSNKLSDF----LASKFINAFGDRGDIRGAIHWFHK--AKASGPCALSCNAVLGVLVR 153
L NK + ++ IN +G G A F + + ALS NA+L V
Sbjct: 94 LEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVN 153
Query: 154 ANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAI 210
+ + +L + I+ ++ + +EPDV +Y T+I+G C G A + DE+ +P+ I
Sbjct: 154 SKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHI 213
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKE 270
T+N ++H KG+ + +++ R E K+ + D+ ++ + G + + +E ++ +
Sbjct: 214 TFNILLHESYTKGKFEEGEQIWARMVE-KNVKRDIRSYNARLLGLAMENKSEEMVSLFDK 272
Query: 271 MQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGR 330
++ +P+V T+ A+I+G G +DEA ++ G + S+L C G
Sbjct: 273 LKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGD 332
Query: 331 SEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL 373
E A + KE+ ++ + +D +V+ K K EA I+
Sbjct: 333 LESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIV 375
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 117/232 (50%), Gaps = 3/232 (1%)
Query: 183 MIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESK 239
+I + ++GM E+A+KVFDEM C+ A+++N +++ + D +F
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 240 SCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEA 299
S PDV ++ TLI G +G EA+ + E++ +G +P+ +T+N L+ G +E
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 300 KRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNE 359
+++ ++M K +K ++ + + L G M +SEE + ++ + DV ++ ++
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 360 YCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
+ GK EA++ +E+ +P FN++ + LE A L K +
Sbjct: 292 FVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 148/308 (48%), Gaps = 12/308 (3%)
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYN---TMIHGLCKKGEMDGAMRVF 232
++ Y +R E ++ +E PN +I+ + G + A +VF
Sbjct: 70 NIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVF 129
Query: 233 NRFAESKSCRPDVVTFTTLIDG--YSKRGEVQEALNCMKEMQEQ-GCQPNVVTYNALIEG 289
+ E ++C+ ++F L++ SK+ ++ E + KE+ + +P+V +YN LI+G
Sbjct: 130 DEMPE-RNCKRTALSFNALLNACVNSKKFDLVEGI--FKELPGKLSIEPDVASYNTLIKG 186
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
LC G+ EA ++ ++ KG+K + T +L G+ EE + MV + + D
Sbjct: 187 LCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRD 246
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
+++Y+ + K E VS+ ++ +KP V +F A+ + V+E KL+EA+ K
Sbjct: 247 IRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYK 306
Query: 410 NMPRMGCSPNFLSYSIVICGLCK---VKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGY 466
+ + GC P ++ ++ +CK ++ +L +E+ + L + + + L+ G
Sbjct: 307 EIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGS 366
Query: 467 CEDGDEEM 474
+D EE+
Sbjct: 367 KQDEAEEI 374
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/475 (21%), Positives = 187/475 (39%), Gaps = 70/475 (14%)
Query: 43 VTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRR 102
+TQ +K AL F WA QP Y CY + D L F SL
Sbjct: 175 ITQSLKIVKEVDAALSLFRWAKK-QPW---YLPSDECYVVLFDGLNQGRDFVGIQSLFEE 230
Query: 103 SNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKA 162
+ S NA+ N V+ L +A ++ +A
Sbjct: 231 MVQDSSSHGDLSFNAY--------------------------NQVIQYLAKAEKLEVAFC 264
Query: 163 IYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAI---TYNTMIHGL 219
+ + +E+ + D TY ++ F G+ A ++++ M + + TY +I L
Sbjct: 265 CFKKA-QESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSL 323
Query: 220 CKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPN 279
K G +D A ++F + E K RP F++L+D K G + ++ EMQ G +P+
Sbjct: 324 AKSGRLDAAFKLFQQMKERK-LRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPS 382
Query: 280 VVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMK 339
+ +LI+ +G +D A R+ +M+ G + N T +++ G+ E A+ K
Sbjct: 383 ATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFK 442
Query: 340 EMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAER 399
+M G YS ++ + G+ A+ I M ++P +SS+ ++ +L +R
Sbjct: 443 DMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKR 502
Query: 400 KLEEAVLLLKNMPRMGCSPNFLSYSIVICGL----------------------------- 430
++ A +L M MG S + + +++ +
Sbjct: 503 LVDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQ 562
Query: 431 ----CKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGY--CEDGDEEMALKTV 479
C G L+ +++ S +D +Y +L C+D D+E L ++
Sbjct: 563 LFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQLMSI 617
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 134/318 (42%), Gaps = 7/318 (2%)
Query: 193 VESARKVFDEMRCEPNAIT----YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVV-- 246
V++A +F + +P + Y + GL + + G +F + S D+
Sbjct: 185 VDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFN 244
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
+ +I +K +++ A C K+ QE GC+ + TYN L+ G +A + M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP 366
+ +T ++ GR + A K ++M R + +S +V+ K G+
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 367 SEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
++ + EM +PS + F ++ KL+ A+ L M + G PNF Y+++
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 427 ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKS 486
I K G++++ + M ++G + Y+CLL + G + A+K M +
Sbjct: 425 IESHAK-SGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAG 483
Query: 487 FLFNKDTYCTFVKELCAK 504
+Y + + L K
Sbjct: 484 LRPGLSSYISLLTLLANK 501
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 130/311 (41%), Gaps = 7/311 (2%)
Query: 200 FDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRG 259
D+++ PN + + L E+D A+ +F + P + L DG ++
Sbjct: 163 LDKLQFVPNMVH---ITQSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGR 219
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNA---LIEGLCLSGNVDEAKRMMSKMRLKGIKDNVA 316
+ + +EM + +++NA +I+ L + ++ A K + G K +
Sbjct: 220 DFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQ 279
Query: 317 TNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREM 376
T +++ F G +A + + M LD Y +I+ K G+ A + ++M
Sbjct: 280 TYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQM 339
Query: 377 VAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGR 436
++++PS S F+++ + +L+ ++ + M G P+ + +I K G+
Sbjct: 340 KERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKA-GK 398
Query: 437 MQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCT 496
+ L M +SG + +Y ++ + + G E+A+ DM FL TY
Sbjct: 399 LDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSC 458
Query: 497 FVKELCAKGKV 507
++ G+V
Sbjct: 459 LLEMHAGSGQV 469
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/464 (22%), Positives = 210/464 (45%), Gaps = 16/464 (3%)
Query: 64 SNPQPNPNNYSHPRSCYA---AITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGD 120
+N P + H S A AI++V S S SL R + L + + FG
Sbjct: 54 ANVAEAPRSKRHSNSYLARKSAISEVQRSSDFLS---SLQRLATVLKVQDLNVILRDFGI 110
Query: 121 RGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTY 180
G + I F + G ++S + V A V+ A IY + E+ + +V+
Sbjct: 111 SGRWQDLIQLFEWMQQHGKISVSTYSSCIKFVGAKNVSKALEIYQSIPDES-TKINVYIC 169
Query: 181 TTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCK-KGEMDGAMRVFNRFA 236
+++ K G ++S K+FD+M+ +P+ +TYNT++ G K K A+ +
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNV 296
+ + D V + T++ + G +EA N +++M+ +G PN+ Y++L+ G+
Sbjct: 230 HN-GIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDY 288
Query: 297 DEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVI 356
+A +M++M+ G+ N T++LK + G + + + + E+ S G + Y ++
Sbjct: 289 KKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCML 348
Query: 357 VNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGC 416
++ K GK EA SI +M K ++ + + + L ++ +EA L ++
Sbjct: 349 MDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYE 408
Query: 417 SPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMAL 476
+ + + ++C C+ G M+ V ++ M + + D ++ L+ + ++ +A
Sbjct: 409 KCDLVMLNTMLCAYCRA-GEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAY 467
Query: 477 KTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLKRCVDNTL 520
+T DM K ++ + + L GK++ + V N L
Sbjct: 468 QTTLDMHSKGHRLEEELCSSLIYHL---GKIRAQAEAFSVYNML 508
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 169/362 (46%), Gaps = 14/362 (3%)
Query: 144 CNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKM-GMVESARKVFDE 202
CN++L LV+ +++ ++DQ+ ++ L +PDV TY T++ G K+ A ++ E
Sbjct: 169 CNSILSCLVKNGKLDSCIKLFDQMKRDGL-KPDVVTYNTLLAGCIKVKNGYPKAIELIGE 227
Query: 203 MRCEPNAITYNTMIHG----LCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
+ N I +++++G +C F + + + P++ +++L++ YS +
Sbjct: 228 L--PHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWK 285
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
G+ ++A M EM+ G PN V L++ G D ++ ++S++ G +N
Sbjct: 286 GDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPY 345
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
++ G G+ EEA +M +G+ D A S++++ C+ + EA + R+
Sbjct: 346 CMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSET 405
Query: 379 KRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQ 438
K + N + ++E + ++K M SP++ ++ I+I K K +
Sbjct: 406 TYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHL- 464
Query: 439 LVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
L + M GH L+ + + L+ + + A +VY+M+ ++K T C +
Sbjct: 465 LAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAF-SVYNMLR----YSKRTICKEL 519
Query: 499 KE 500
E
Sbjct: 520 HE 521
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 184/427 (43%), Gaps = 61/427 (14%)
Query: 38 LTPSLVTQV---IKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFS 94
TPS +++ ++N NPH +L FF + SH + + +L L S
Sbjct: 69 FTPSQFSEITLCLRN--NPHLSLRFFLFTRRYSL----CSHDTHSCSTLIHILSRSRLKS 122
Query: 95 TADSLLRRSNKLS--------------------------DFLASKFINAFGDRGDIRGAI 128
A ++R + +L+ F+ I + D +I GA+
Sbjct: 123 HASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAV 182
Query: 129 HWFHKAKASGPCAL--SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRG 186
K ++ G A +CNA++ + R + +Y +E DV
Sbjct: 183 MVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMY----REVFGLDDV--------- 229
Query: 187 FCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVV 246
V+ A+K+ +++ PNA T+N+M+ ++GE + R++ E C P+V
Sbjct: 230 -----SVDEAKKMIGKIK--PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVY 282
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
++ L++ Y RG + EA +EM+ +G ++V YN +I GLC + V +AK + M
Sbjct: 283 SYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKI--- 363
LKGI+ T ++ G+C G + + +EM +G + D +V C
Sbjct: 343 GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDG 402
Query: 364 GKPSEAVSILREMVAKRM-KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLS 422
+ EA I+++ V + M PS + + + + L + K++ A+ + M G P+ +
Sbjct: 403 QRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQET 462
Query: 423 YSIVICG 429
Y I G
Sbjct: 463 YRAFIDG 469
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 118/239 (49%), Gaps = 6/239 (2%)
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQ-GCQPNVVTYNALIEGLCLSGNVDEAK 300
+P+ TF +++ + + GE + +EM+E+ GC PNV +YN L+E C G + EA+
Sbjct: 242 KPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAE 301
Query: 301 RMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEY 360
++ +M+++G+ ++ +M+ G C +A + ++M +G++ Y +VN Y
Sbjct: 302 KVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGY 361
Query: 361 CKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAER---KLEEAVLLLKNMPRMGC- 416
CK G + + REM K + + A+ L +R ++ EA ++K+ R
Sbjct: 362 CKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMF 421
Query: 417 SPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMA 475
P+ Y +++ LC+ G+M + + M+ G Y + GY GDEE +
Sbjct: 422 YPSRNCYELLVKRLCE-DGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETS 479
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 43/236 (18%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P A + N+++ R + + I+ ++ +E P+V++Y ++ +C G++ A K
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 199 VFDEMRCEP---NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
V++EM+ + + YNTMI GLC E+ A +F R K +T+ L++GY
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELF-RDMGLKGIECTCLTYEHLVNGY 361
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLC------------------------ 291
K G+V L +EM+ +G + + +T AL+EGLC
Sbjct: 362 CKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMF 421
Query: 292 ---------------LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSE 332
G +D A + ++M KG K + T + + G+ +VG E
Sbjct: 422 YPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEE 477
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 154/373 (41%), Gaps = 29/373 (7%)
Query: 143 SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDE 202
SC+ ++ +L R+ + A I ++ A + D + R K
Sbjct: 107 SCSTLIHILSRSRLKSHASEIIRLALRLAATDEDEDRVLKVFRSLIK-----------SY 155
Query: 203 MRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQ 262
RC ++ +I E+DGA+ V + S+ + T LI S+R
Sbjct: 156 NRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKL-RSRGINAQISTCNALITEVSRRRGAS 214
Query: 263 EALNCMKEM-------------QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
+E+ +PN T+N+++ G + +R+ +M +
Sbjct: 215 NGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEE 274
Query: 310 -GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSE 368
G NV + +++ +C G EA K +EM RG+ D+ AY+ ++ C + +
Sbjct: 275 VGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVK 334
Query: 369 AVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVIC 428
A + R+M K ++ + ++ + ++ +++ + M R G + L+ ++
Sbjct: 335 AKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVE 394
Query: 429 GLCKVKGRMQLVE--ELVSSMLQSGHNLDA-TMYNCLLGGYCEDGDEEMALKTVYDMIDK 485
GLC + ++VE ++V ++ + Y L+ CEDG + AL +M+ K
Sbjct: 395 GLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGK 454
Query: 486 SFLFNKDTYCTFV 498
F +++TY F+
Sbjct: 455 GFKPSQETYRAFI 467
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 125/308 (40%), Gaps = 46/308 (14%)
Query: 205 CEPNAITYNTMIHGLCK---KGEMDGAMRVFNRFAESKSCRPDVV-TFTTLIDGYSKRGE 260
C + + +T+IH L + K +R+ R A + V+ F +LI Y++
Sbjct: 101 CSHDTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNR--- 157
Query: 261 VQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTS 320
C ++ LI+ S +D A +M K+R +GI ++T +
Sbjct: 158 ---------------CGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNA 202
Query: 321 MLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKR 380
++ + K +E+ G+D V V+E ++M+ K
Sbjct: 203 LITEVSRRRGASNGYKMYREVF--GLD------DVSVDE-------------AKKMIGK- 240
Query: 381 MKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPR-MGCSPNFLSYSIVICGLCKVKGRMQL 439
+KP+ ++FN++ E + E + + M +GCSPN SY++++ C +G M
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYC-ARGLMSE 299
Query: 440 VEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
E++ M G D YN ++GG C + + A + DM K TY V
Sbjct: 300 AEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVN 359
Query: 500 ELCAKGKV 507
C G V
Sbjct: 360 GYCKAGDV 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 112/300 (37%), Gaps = 67/300 (22%)
Query: 226 DGAMRVFNRFAES-KSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
D ++VF +S C F LI E+ A+ M++++ +G + T N
Sbjct: 142 DRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCN 201
Query: 285 ALI-----------------EGLCLSG-NVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC 326
ALI E L +VDEAK+M+ K IK N T SM+ F
Sbjct: 202 ALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGK-----IKPNATTFNSMMVSFY 256
Query: 327 MVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVS 386
G +E M E + R M+ +V P+V
Sbjct: 257 REGETE-----MVERIWREMEEEVGC-----------------------------SPNVY 282
Query: 387 SFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCK----VKGRMQLVEE 442
S+N + A + EA + + M G + ++Y+ +I GLC VK + E
Sbjct: 283 SYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAK-----E 337
Query: 443 LVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELC 502
L M G Y L+ GYC+ GD + L +M K F + T V+ LC
Sbjct: 338 LFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLC 397
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 168/367 (45%), Gaps = 20/367 (5%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASGP--CALSCNAVLGVLVRANRVNLAKAIYDQVV--K 169
+ ++G G A F + ++SGP A++ +L V ++ A+ +++ ++ K
Sbjct: 180 LMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEK 239
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM--RCEPNA-ITYNTMIHGLCKKGEMD 226
++ ++PD Y MI + K G E ARKVF M + P + +TYN+++ E+
Sbjct: 240 KSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS 299
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
+++++ S +PDVV++ LI Y + +EAL+ +EM + G +P YN L
Sbjct: 300 ---KIYDQMQRS-DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 355
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
++ +SG V++AK + MR I ++ + T+ML + E A K K + G
Sbjct: 356 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 415
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
+ ++ Y ++ Y K + + + +M +K + + + + A+
Sbjct: 416 EPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALG 475
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGY 466
K M G P+ + ++++ L + ++ +EL N AT+ + Y
Sbjct: 476 WYKEMESCGVPPDQKAKNVLLS-LASTQDELEEAKELTGI-----RNETATIIARV---Y 526
Query: 467 CEDGDEE 473
D DEE
Sbjct: 527 GSDDDEE 533
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 172/392 (43%), Gaps = 19/392 (4%)
Query: 127 AIHWFHKAKASGPCALSCNAVLGVLVRANRV---NLAKAIYDQVVKEALVEPDVFTYTTM 183
A+ + K G L + VLG LVR ++ NL I + + + + +
Sbjct: 86 AVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLML 145
Query: 184 IRGFCKMGMVESARKVFD---EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKS 240
I + K+G A +V +M PN I+Y ++ + G+ + A +F R +S
Sbjct: 146 ITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRM-QSSG 204
Query: 241 CRPDVVTFT----TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNV 296
P +T+ T ++G K E +E + + ++ +P+ Y+ +I +GN
Sbjct: 205 PEPSAITYQIILKTFVEG-DKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 297 DEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVI 356
++A+++ S M KG+ + T S++ +E K +M + DV +Y+++
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALL 320
Query: 357 VNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGC 416
+ Y + + EA+S+ EM+ ++P+ ++N + +E+A + K+M R
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 417 SPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMAL 476
P+ SY+ ++ M+ E+ + G + Y L+ GY + D E +
Sbjct: 381 FPDLWSYTTMLSAYVNASD-MEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 439
Query: 477 KTVYDMIDKSFLFNKDTYCTFVKELCAKGKVK 508
+ VY+ + S + T T + + A G+ K
Sbjct: 440 E-VYEKMRLSGIKANQTILTTI--MDASGRCK 468
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 140/317 (44%), Gaps = 10/317 (3%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLV----RANRVNLAKAIYD 165
SK I+ G +G R A+ F + K SG P A NA++ + +A + + D
Sbjct: 137 SKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLD 196
Query: 166 QVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKK 222
++ +P+V TY ++R F + G V+ +F ++ P+ T+N ++ K
Sbjct: 197 KMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKN 256
Query: 223 GEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVT 282
G + V R S C+PD++TF LID Y K+ E ++ K + +P + T
Sbjct: 257 GMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 283 YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
+N++I + +D+A+ + KM + T M+ + G A + +E+
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVG 375
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLE 402
L + ++ YC+ G EA + A R+ P S++ +++ E
Sbjct: 376 ESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKE 435
Query: 403 EAVLLLKNMPRMGCSPN 419
+ +L+K M + G PN
Sbjct: 436 QVQILMKKMEKDGIVPN 452
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 128/273 (46%), Gaps = 15/273 (5%)
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLI-------DGYSKRG 259
P+ Y+ +I + KKG+ AM +F+ S CRPD + LI D
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS-GCRPDASVYNALITAHLHTRDKAKALE 189
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
+V+ L+ MK ++ CQPNVVTYN L+ SG VD+ + + + + +V T
Sbjct: 190 KVRGYLDKMKGIER--CQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFN 247
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
++ + G +E + M S D+ ++V+++ Y K + + + ++
Sbjct: 248 GVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRS 307
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYS--IVICGLCKVKGRM 437
+ KP++ +FN++ R +++A + K M M P+F++Y I++ G C G +
Sbjct: 308 KEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC---GSV 364
Query: 438 QLVEELVSSMLQSGHNLDATMYNCLLGGYCEDG 470
E+ + +S L A+ N +L YC +G
Sbjct: 365 SRAREIFEEVGESDRVLKASTLNAMLEVYCRNG 397
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 169/369 (45%), Gaps = 20/369 (5%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASGP--CALSCNAVLGVLVRANRVNLAKAIYDQVV- 168
+ + ++G G A F + ++SGP A++ +L V ++ A+ +++ ++
Sbjct: 185 TALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD 244
Query: 169 -KEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM--RCEPNA-ITYNTMIHGLCKKGE 224
K++ ++PD Y MI + K G E ARKVF M + P + +TYN+++ E
Sbjct: 245 EKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKE 304
Query: 225 MDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
+ +++++ S +PDVV++ LI Y + +EAL+ +EM + G +P YN
Sbjct: 305 VS---KIYDQMQRS-DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYN 360
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
L++ +SG V++AK + MR I ++ + T+ML + E A K K +
Sbjct: 361 ILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVD 420
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA 404
G + ++ Y ++ Y K + + + +M +K + + + + A
Sbjct: 421 GFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSA 480
Query: 405 VLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLG 464
+ K M G P+ + ++++ L + ++ +EL N AT+ +
Sbjct: 481 LGWYKEMESCGVPPDQKAKNVLLS-LASTQDELEEAKELTGI-----RNETATIIARV-- 532
Query: 465 GYCEDGDEE 473
Y D DEE
Sbjct: 533 -YGSDDDEE 540
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 161/365 (44%), Gaps = 17/365 (4%)
Query: 127 AIHWFHKAKASGPCALSCNAVLGVLVRANRV---NLAKAIYDQVVKEALVEPDVFTYTTM 183
A+ + K G L + VLG LVR ++ NL I + + + + +
Sbjct: 93 AVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLML 152
Query: 184 IRGFCKMGMVESARKVFD---EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKS 240
I + K+G A +V +M PN I+Y ++ + G+ + A +F R +S
Sbjct: 153 ITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRM-QSSG 211
Query: 241 CRPDVVTFT----TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNV 296
P +T+ T ++G K E +E + + ++ +P+ Y+ +I +GN
Sbjct: 212 PEPSAITYQIILKTFVEG-DKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 297 DEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVI 356
++A+++ S M KG+ + T S++ +E K +M + DV +Y+++
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALL 327
Query: 357 VNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGC 416
+ Y + + EA+S+ EM+ ++P+ ++N + +E+A + K+M R
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
Query: 417 SPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMAL 476
P+ SY+ ++ M+ E+ + G + Y L+ GY + D E +
Sbjct: 388 FPDLWSYTTMLSAYVNASD-MEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 446
Query: 477 KTVYD 481
+ VY+
Sbjct: 447 E-VYE 450
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 14/250 (5%)
Query: 246 VTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSK 305
+ F LI Y K G A + + + G PNV++Y AL+E G + A+ + +
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 306 MRLKGIKDNVATNTSMLKGFC---MVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCK 362
M+ G + + T +LK F +EE + + + + D K Y +++ Y K
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 363 IGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLS 422
G +A + MV K + S ++N+ ++ E +E + M R P+ +S
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNS---LMSFETSYKEVSKIYDQMQRSDIQPDVVS 323
Query: 423 YSIVICGLCKVKGRMQLVEELVS---SMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTV 479
Y+++I K GR + EE +S ML +G YN LL + G E A KTV
Sbjct: 324 YALLI----KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA-KTV 378
Query: 480 YDMIDKSFLF 489
+ + + +F
Sbjct: 379 FKSMRRDRIF 388
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 98/195 (50%), Gaps = 3/195 (1%)
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAM 229
+EPD T +R C+ G V+ A+ + E+ P+ TYN ++ LCK ++
Sbjct: 155 LEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVY 214
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
+ + +PD+V+FT LID ++EA+ + ++ G +P+ YN +++G
Sbjct: 215 EFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG 274
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
C EA + KM+ +G++ + T +++ G GR EEA ++K MV G + D
Sbjct: 275 FCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPD 334
Query: 350 VKAYSVIVNEYCKIG 364
Y+ ++N C+ G
Sbjct: 335 TATYTSLMNGMCRKG 349
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 137/281 (48%), Gaps = 9/281 (3%)
Query: 160 AKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDE-MRCEPN----AITYNT 214
AK++++ + + + D+ + ++++ + + +V K+F ++ +PN T+
Sbjct: 68 AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLI 127
Query: 215 MIHGLCKKGE--MDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQ 272
++ C+ + + RV N + PD VT + + G V EA + MKE+
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNN-GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 186
Query: 273 EQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK-GIKDNVATNTSMLKGFCMVGRS 331
E+ P+ TYN L++ LC ++ + +MR +K ++ + T ++ C
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 332 EEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAV 391
EA+ + ++ + G D Y+ I+ +C + K SEAV + ++M + ++P ++N +
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Query: 392 FRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCK 432
L ++EEA + LK M G P+ +Y+ ++ G+C+
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 119/290 (41%), Gaps = 6/290 (2%)
Query: 221 KKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM--QEQGCQP 278
K + A +FN A + D+ +++ Y V + + + + + +P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 279 NVVTYNALIEGLCLS--GNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIK 336
T+ L+ C + ++ R+++ M G++ + T ++ C GR +EA
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 337 HMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK-RMKPSVSSFNAVFRVL 395
MKE+ + D Y+ ++ CK + EM +KP + SF + +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 396 VAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLD 455
+ L EA+ L+ + G P+ Y+ ++ G C + + V + M + G D
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG-VYKKMKEEGVEPD 299
Query: 456 ATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKG 505
YN L+ G + G E A + M+D + + TY + + +C KG
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 4/180 (2%)
Query: 341 MVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERK 400
MV+ G++ D + V C+ G+ EA +++E+ K P ++N + + L +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 401 LEEAVLLLKNM-PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMY 459
L + M P+ +S++I+I +C K ++ LVS + +G D +Y
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKN-LREAMYLVSKLGNAGFKPDCFLY 268
Query: 460 NCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEE--YLKRCVD 517
N ++ G+C A+ M ++ ++ TY T + L G+V+E YLK VD
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 173/370 (46%), Gaps = 30/370 (8%)
Query: 38 LTPSLVTQVIK--NTHNPHHALFFFNWASNPQPNPNN-YSHPRSCYAAITDVLLSHSLFS 94
L S + +V++ + + L FF WA + ++ Y + ++C I + L
Sbjct: 58 LDSSCINEVLRRCDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKAC--DILKIRAKPDLIK 115
Query: 95 TADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHW-FHKAKASGPCA--LSCNAVLGVL 151
R+ + + + ++ ++ W K CA ++ N V+ +
Sbjct: 116 YVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLF 175
Query: 152 VRANRVNLAKAIYDQVVKE---ALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---C 205
+N+A D ++KE + PDV TYT+MI G+C G ++ A ++ EM C
Sbjct: 176 ADKGDLNIA----DMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDC 231
Query: 206 EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKS---CRPDVVTFTTLIDGYSKRGEVQ 262
N++TY+ ++ G+CK G+M+ A+ + + P+ VT+T +I + ++ V+
Sbjct: 232 VLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVE 291
Query: 263 EALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM-----RLKGIKDNVAT 317
EAL + M +GC PN VT LI+G+ + DE + +SK+ +L G+ +
Sbjct: 292 EALLVLDRMGNRGCMPNRVTACVLIQGVLEN---DEDVKALSKLIDKLVKLGGVSLSECF 348
Query: 318 NTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMV 377
+++ + + R EEA K + M+ RG+ D A S + E C + + + + +E+
Sbjct: 349 SSATV-SLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIE 407
Query: 378 AKRMKPSVSS 387
K +K ++ S
Sbjct: 408 KKDVKSTIDS 417
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 148/294 (50%), Gaps = 11/294 (3%)
Query: 200 FDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRG 259
F E + + YN +I KG+++ A + + PDV+T+T++I+GY G
Sbjct: 156 FPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEM-DCVGLYPDVITYTSMINGYCNAG 214
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG----IKDNV 315
++ +A KEM + C N VTY+ ++EG+C SG+++ A ++++M + I N
Sbjct: 215 KIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNA 274
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
T T +++ FC R EEA+ + M +RG + V++ + + +A+S L +
Sbjct: 275 VTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLID 334
Query: 376 MVAKRMKPSVSS-FNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
+ K S+S F++ L+ ++ EEA + + M G P+ L+ S V LC ++
Sbjct: 335 KLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLE 394
Query: 435 GRMQ---LVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDK 485
+ L +E+ ++S +D+ ++ LL G C+ G+ A K M+DK
Sbjct: 395 RYLDCFLLYQEIEKKDVKS--TIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDK 446
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 108/214 (50%), Gaps = 8/214 (3%)
Query: 239 KSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDE 298
+ C +V T ++ ++ EAL +++ E + V YN +I G+++
Sbjct: 124 EECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNI 183
Query: 299 AKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVN 358
A ++ +M G+ +V T TSM+ G+C G+ ++A + KEM L+ YS I+
Sbjct: 184 ADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILE 243
Query: 359 EYCKIGKPSEAVSILREMVAKR----MKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRM 414
CK G A+ +L EM + + P+ ++ V + +R++EEA+L+L M
Sbjct: 244 GVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNR 303
Query: 415 GCSPNFLSYSIVICGLCK----VKGRMQLVEELV 444
GC PN ++ ++I G+ + VK +L+++LV
Sbjct: 304 GCMPNRVTACVLIQGVLENDEDVKALSKLIDKLV 337
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 86/173 (49%), Gaps = 5/173 (2%)
Query: 331 SEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNA 390
++EA+ +++ + D AY++++ + G + A +++EM + P V ++ +
Sbjct: 146 ADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTS 205
Query: 391 VFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM-LQ 449
+ K+++A L K M + C N ++YS ++ G+CK G M+ EL++ M +
Sbjct: 206 MINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCK-SGDMERALELLAEMEKE 264
Query: 450 SGHNL---DATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
G L +A Y ++ +CE E AL + M ++ + N+ T C ++
Sbjct: 265 DGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQ 317
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 138/308 (44%), Gaps = 31/308 (10%)
Query: 29 EPLKKFSCYLTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLL 88
E + K TP + I +P FNWAS QP ++H Y L
Sbjct: 128 ETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQ-QPR---FTHENCSYHIAIRKLG 183
Query: 89 SHSLFSTADSLLRRSNKL----SDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSC 144
+ ++ D ++ + + ++ L + I F G + A++ F S L C
Sbjct: 184 AAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSK--NLEC 241
Query: 145 NAVL--------GVLVRANR-------VNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCK 189
+ +L R N + ++++ Q+V +EPDVF +++G+
Sbjct: 242 RPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSG-IEPDVFALNCLVKGYVL 300
Query: 190 MGMVESARKVFDEMR----CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDV 245
V A ++F +M CEPN+ TY+ +IHGLC +G A + + + K P+
Sbjct: 301 SLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEM-KGKGFVPNG 359
Query: 246 VTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSK 305
++ +L++ ++ GE+ +A+ C+ EM E G + ++Y L++ C G DEA R++
Sbjct: 360 KSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEM 419
Query: 306 MRLKGIKD 313
+R K + D
Sbjct: 420 LREKQLVD 427
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 180 YTTMIRGFCKMGMVESARKVFDEM------RCEPNAITYNTMIHGLCKKGE--------M 225
Y ++I F K G + A +F M C P TY+ + L +G M
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 226 DGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQE-QGCQPNVVTYN 284
+ +F + +S PDV L+ GY V +AL +M C+PN TY+
Sbjct: 270 ETVRSLFRQMVDS-GIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYD 328
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
LI GLC G A+ ++S+M+ KG N + S++ F + G ++A+K + EM+
Sbjct: 329 YLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIEN 388
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVL 395
G +D +Y +V+E C+ GK EA +L EM+ ++ S++ + VL
Sbjct: 389 GRVVDFISYRTLVDESCRKGKYDEATRLL-EMLREKQLVDRDSYDKLVNVL 438
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 117/250 (46%), Gaps = 24/250 (9%)
Query: 179 TYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRF 235
+Y IR M + + +++ R N YN++I K G++ A+ +F
Sbjct: 174 SYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHM 233
Query: 236 AESKS--CRPDVVTFTTLIDGYSKRGE--------VQEALNCMKEMQEQGCQPNVVTYNA 285
SK+ CRP + T+ L RG ++ + ++M + G +P+V N
Sbjct: 234 VTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNC 293
Query: 286 LIEGLCLSGNVDEAKRMMSKMRL-KGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
L++G LS +V++A R+ +M + + N T ++ G C GR+ A + + EM +
Sbjct: 294 LVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGK 353
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK-RMKPSVSSFNAVFRVLVAER---- 399
G + K+Y+ +VN + G+ +AV L EM+ R+ +S +R LV E
Sbjct: 354 GFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFIS-----YRTLVDESCRKG 408
Query: 400 KLEEAVLLLK 409
K +EA LL+
Sbjct: 409 KYDEATRLLE 418
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 371 SILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRM-GCSPNFLSYSIVICG 429
S+ R+MV ++P V + N + + V + +A+ + M + C PN +Y +I G
Sbjct: 274 SLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHG 333
Query: 430 LCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF 489
LC +GR EL+S M G + YN L+ + G+ + A+K +++MI+ +
Sbjct: 334 LC-AQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVV 392
Query: 490 NKDTYCTFVKELCAKGKVKE 509
+ +Y T V E C KGK E
Sbjct: 393 DFISYRTLVDESCRKGKYDE 412
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 108/234 (46%), Gaps = 14/234 (5%)
Query: 248 FTTLIDGYSKRGEVQEALNCMKEM---QEQGCQPNVVTYNALIEGLCLSGN--------V 296
+ ++I ++K G++ A+N + M + C+P + TY+ L + L GN +
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 297 DEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEM-VSRGMDLDVKAYSV 355
+ + + +M GI+ +V ++KG+ + +A++ +M V + + Y
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 356 IVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMG 415
+++ C G+ A +L EM K P+ S+N++ ++++AV L M G
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 416 CSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
+F+SY ++ C+ KG+ L+ ML+ +D Y+ L+ +D
Sbjct: 390 RVVDFISYRTLVDESCR-KGKYDEATRLL-EMLREKQLVDRDSYDKLVNVLHKD 441
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 140/317 (44%), Gaps = 10/317 (3%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLV----RANRVNLAKAIYD 165
SK I+ G +G R A+ F + K SG P A NA++ + +A + + D
Sbjct: 137 SKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLD 196
Query: 166 QVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKK 222
++ +P+V TY ++R F + G V+ +F ++ P+ T+N ++ K
Sbjct: 197 KMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKN 256
Query: 223 GEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVT 282
G + V R S C+PD++TF LID Y K+ E ++ K + +P + T
Sbjct: 257 GMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 283 YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
+N++I + +D+A+ + KM + T M+ + G A + +E+
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVG 375
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLE 402
L + ++ YC+ G EA + A R+ P S++ +++ E
Sbjct: 376 ESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKE 435
Query: 403 EAVLLLKNMPRMGCSPN 419
+ +L+K M + G PN
Sbjct: 436 QVQILMKKMEKDGIVPN 452
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 128/273 (46%), Gaps = 15/273 (5%)
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLI-------DGYSKRG 259
P+ Y+ +I + KKG+ AM +F+ S CRPD + LI D
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS-GCRPDASVYNALITAHLHTRDKAKALE 189
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
+V+ L+ MK ++ CQPNVVTYN L+ SG VD+ + + + + +V T
Sbjct: 190 KVRGYLDKMKGIER--CQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFN 247
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
++ + G +E + M S D+ ++V+++ Y K + + + ++
Sbjct: 248 GVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRS 307
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYS--IVICGLCKVKGRM 437
+ KP++ +FN++ R +++A + K M M P+F++Y I++ G C G +
Sbjct: 308 KEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC---GSV 364
Query: 438 QLVEELVSSMLQSGHNLDATMYNCLLGGYCEDG 470
E+ + +S L A+ N +L YC +G
Sbjct: 365 SRAREIFEEVGESDRVLKASTLNAMLEVYCRNG 397
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 207/506 (40%), Gaps = 129/506 (25%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEA 171
+K +N G I A F K +A ++ N ++ V+ +N A+ ++D + K
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARN--TVTWNTMISGYVKRREMNQARKLFDVMPKR- 100
Query: 172 LVEPDVFTYTTMIRGFCKMG---MVESARKVFDEMRC----------------------- 205
DV T+ TMI G+ G +E ARK+FDEM
Sbjct: 101 ----DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEAL 156
Query: 206 -------EPNAITYNTMIHGLCKKGEMDGAMRVF---------------------NRFAE 237
E NA++++ MI G C+ GE+D A+ +F R +E
Sbjct: 157 LLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSE 216
Query: 238 SK----------SCRPDVV-TFTTLIDGYSKRGEVQEALNCM-------------KEMQE 273
+ S R D+V + TLI GY +RG+V EA C+ E +E
Sbjct: 217 AAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQV-EAARCLFDQIPDLCGDDHGGEFRE 275
Query: 274 QGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEE 333
+ C+ NVV++N++I+ G+V A+ + +M+ +D ++ NT M+ G+ V R E+
Sbjct: 276 RFCK-NVVSWNSMIKAYLKVGDVVSARLLFDQMK---DRDTISWNT-MIDGYVHVSRMED 330
Query: 334 AIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFR 393
A EM +R D +++++V+ Y +G V + R K + S+N++
Sbjct: 331 AFALFSEMPNR----DAHSWNMMVSGYASVGN----VELARHYFEKTPEKHTVSWNSIIA 382
Query: 394 VLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI---CGLCKVKGRMQLVEELVSSMLQS 450
+ +EAV L M G P+ + + ++ GL ++ MQ+ + +V +++
Sbjct: 383 AYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPD 442
Query: 451 --GHNLDATMY-------------------------NCLLGGYCEDGDEEMALKTVYDMI 483
HN TMY N ++GGY G+ AL M
Sbjct: 443 VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMK 502
Query: 484 DKSFLFNKDTYCTFVKELCAKGKVKE 509
+ T+ + + G V E
Sbjct: 503 SNGIYPSHITFVSVLNACAHAGLVDE 528
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 162/350 (46%), Gaps = 46/350 (13%)
Query: 143 SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDE 202
+ N L ++R+ + A+ I+ E L + T+ TMI G+ K + ARK+FD
Sbjct: 42 ATNKELNQMIRSGYIAEARDIF-----EKLEARNTVTWNTMISGYVKRREMNQARKLFDV 96
Query: 203 MRCEPNAITYNTMIHGLCKKGE---MDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRG 259
M + + +T+NTMI G G ++ A ++F+ D ++ T+I GY+K
Sbjct: 97 M-PKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR-----DSFSWNTMISGYAKNR 150
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
+ EAL ++M E+ N V+++A+I G C +G VD A + KM +K + +
Sbjct: 151 RIGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVK----DSSPLC 202
Query: 320 SMLKGFCMVGRSEEA---IKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREM 376
+++ G R EA + +VS DL V AY+ ++ Y + G+ A + ++
Sbjct: 203 ALVAGLIKNERLSEAAWVLGQYGSLVSGREDL-VYAYNTLIVGYGQRGQVEAARCLFDQI 261
Query: 377 -----------VAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSI 425
+R +V S+N++ + + + A LL M + +S++
Sbjct: 262 PDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMK----DRDTISWNT 317
Query: 426 VICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMA 475
+I G V RM+ L S M N DA +N ++ GY G+ E+A
Sbjct: 318 MIDGYVHVS-RMEDAFALFSEM----PNRDAHSWNMMVSGYASVGNVELA 362
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 136/320 (42%), Gaps = 17/320 (5%)
Query: 66 PQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIR 125
P + ++++ S YA++ +V L+ F ++ + + I A+ D +
Sbjct: 339 PNRDAHSWNMMVSGYASVGNVELARHYF-------EKTPEKHTVSWNSIIAAYEKNKDYK 391
Query: 126 GAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTM 183
A+ F + G P + ++L + L ++ VVK + PDV + +
Sbjct: 392 EAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI--PDVPVHNAL 449
Query: 184 IRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRP 243
I + + G + +R++FDEM+ + IT+N MI G G A+ +F +S P
Sbjct: 450 ITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSM-KSNGIYP 508
Query: 244 DVVTFTTLIDGYSKRGEVQEA-LNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRM 302
+TF ++++ + G V EA + M +P + Y++L+ G +EA +
Sbjct: 509 SHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYI 568
Query: 303 MSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCK 362
++ M + K + + VG + A E +SR Y ++ N Y
Sbjct: 569 ITSMPFEPDKTVWGALLDACRIYNNVGLAHVA----AEAMSRLEPESSTPYVLLYNMYAD 624
Query: 363 IGKPSEAVSILREMVAKRMK 382
+G EA + M +KR+K
Sbjct: 625 MGLWDEASQVRMNMESKRIK 644
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 149/326 (45%), Gaps = 26/326 (7%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
+S N+++ ++ V A+ ++DQ + + D ++ TMI G+ + +E A +F
Sbjct: 282 VSWNSMIKAYLKVGDVVSARLLFDQ-----MKDRDTISWNTMIDGYVHVSRMEDAFALFS 336
Query: 202 EMRCEPN--AITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRG 259
EM PN A ++N M+ G G ++ A F + E + V++ ++I Y K
Sbjct: 337 EM---PNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHT-----VSWNSIIAAYEKNK 388
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRM-MSKMRLKGIKDNVATN 318
+ +EA++ M +G +P+ T +L+ +G V+ M M ++ +K + +V +
Sbjct: 389 DYKEAVDLFIRMNIEGEKPDPHTLTSLLS--ASTGLVNLRLGMQMHQIVVKTVIPDVPVH 446
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
+++ + G E+ + EM + +V ++ ++ Y G SEA+++ M +
Sbjct: 447 NALITMYSRCGEIMESRRIFDEM---KLKREVITWNAMIGGYAFHGNASEALNLFGSMKS 503
Query: 379 KRMKPSVSSFNAVFRVLVAERKLEEA-VLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRM 437
+ PS +F +V ++EA + M P YS ++ + +G+
Sbjct: 504 NGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLV-NVTSGQGQF 562
Query: 438 QLVEELVSSMLQSGHNLDATMYNCLL 463
+ +++SM D T++ LL
Sbjct: 563 EEAMYIITSM---PFEPDKTVWGALL 585
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 169/389 (43%), Gaps = 13/389 (3%)
Query: 128 IHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGF 187
+H F P ++ N + + + +A Y + A + P + T+ +++G
Sbjct: 152 LHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGL 211
Query: 188 CKMGMVESARKVFDEMRCEP---NAITYNTMIHGLCKKGEMDGAMRVFNRFAES-KSCRP 243
+E A ++ ++M + + + Y+ ++ G K + DG ++++ E
Sbjct: 212 VSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVD 271
Query: 244 DVVTFTTLIDGYSKRGEVQEALNCMKEM--QEQGCQPNVVTYNALIEGLCLSGNVDEAKR 301
D V + L+ GY + +EA+ C +E + + + + YN ++E L +G DEA +
Sbjct: 272 DGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALK 331
Query: 302 MMSKMRL-----KGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVI 356
+ ++ + + N+ T M+ G+C G+ EEA++ ++M D +++ +
Sbjct: 332 LFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNL 391
Query: 357 VNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGC 416
+N+ C +EA + EM K +KP ++ + E K++E K M
Sbjct: 392 MNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNL 451
Query: 417 SPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMAL 476
PN Y+ + L K G++ + M+ S +D Y ++ E G + L
Sbjct: 452 RPNLAVYNRLQDQLIKA-GKLDDAKSFF-DMMVSKLKMDDEAYKFIMRALSEAGRLDEML 509
Query: 477 KTVYDMIDKSFLFNKDTYCTFVKELCAKG 505
K V +M+D + + FVKE KG
Sbjct: 510 KIVDEMLDDDTVRVSEELQEFVKEELRKG 538
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/417 (20%), Positives = 169/417 (40%), Gaps = 52/417 (12%)
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGF---CKMGMVESARKVFDEMRCEP 207
L+R N + A A+Y + + P +FT T++ K G + ++ P
Sbjct: 105 LIRENDLEEA-ALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAP 163
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
N ITYN + + + A+ + F ++ P + TF L+ G +++A+
Sbjct: 164 NIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEI 223
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM--RLKGIKDNVATNTSMLKGF 325
++M +G + V Y+ L+ G + + D ++ ++ +L G D+ ++KG+
Sbjct: 224 KEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGY 283
Query: 326 CMVGRSEEAIKHMKEMVS------------------------------------------ 343
M +EA++ +E V
Sbjct: 284 FMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPP 343
Query: 344 RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEE 403
R + +++ ++V+VN YC GK EA+ + R+M + P SFN + L L E
Sbjct: 344 RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAE 403
Query: 404 AVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLL 463
A L M P+ +Y +++ C +G++ +M++S + +YN L
Sbjct: 404 AEKLYGEMEEKNVKPDEYTYGLLM-DTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQ 462
Query: 464 GGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLKRCVDNTL 520
+ G + A K+ +DM+ + + Y ++ L G++ E + + VD L
Sbjct: 463 DQLIKAGKLDDA-KSFFDMMVSKLKMDDEAYKFIMRALSEAGRLDE--MLKIVDEML 516
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 185/416 (44%), Gaps = 46/416 (11%)
Query: 96 ADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVL-GVLVRA 154
+D L + S++ F +K I GDI GA+ FH +A ++ N++L G+
Sbjct: 49 SDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKN--TITWNSLLIGISKDP 106
Query: 155 NRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNT 214
+R+ A ++D++ EPD F+Y M+ + + E A+ FD M + +A ++NT
Sbjct: 107 SRMMEAHQLFDEI-----PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK-DAASWNT 160
Query: 215 MIHGLCKKGEMDGAMRVFNRFAESKSCRPD--------------------------VVTF 248
MI G ++GEM+ A +F E + VV +
Sbjct: 161 MITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAW 220
Query: 249 TTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRL 308
T +I GY K +V+ A K+M N+VT+NA+I G + ++ ++ M
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLE 277
Query: 309 KGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG-MDLDVKAYSVIVNEYCKIGKPS 367
+GI+ N + +S L G C + + + + ++VS+ + DV A + +++ YCK G+
Sbjct: 278 EGIRPNSSGLSSALLG-CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELG 336
Query: 368 EAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI 427
+A + M K V ++NA+ ++A+ L + M P+++++ V+
Sbjct: 337 DAWKLFEVM----KKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVL 392
Query: 428 CGLCKVKGRMQLVEELVSSMLQSGH-NLDATMYNCLLGGYCEDGDEEMALKTVYDM 482
C G + + SM++ Y C++ G E ALK + M
Sbjct: 393 LA-CNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 165/361 (45%), Gaps = 33/361 (9%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCK--MGMVESARKVFDE 202
N ++ VR+ ++ A ++ + + T+ +++ G K M+E A ++FDE
Sbjct: 65 NKIIARCVRSGDIDGALRVF-----HGMRAKNTITWNSLLIGISKDPSRMME-AHQLFDE 118
Query: 203 MRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQ 262
+ EP+ +YN M+ + + A F+R D ++ T+I GY++RGE++
Sbjct: 119 IP-EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK-----DAASWNTMITGYARRGEME 172
Query: 263 EALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSML 322
+A M E+ N V++NA+I G G++++A ++G V T+M+
Sbjct: 173 KARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMI 224
Query: 323 KGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMK 382
G+ + E A K+M ++ ++ ++ +++ Y + +P + + + R M+ + ++
Sbjct: 225 TGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR 281
Query: 383 PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEE 442
P+ S ++ L+ + + + + + + + +I CK G + +
Sbjct: 282 PNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKC-GELGDAWK 340
Query: 443 LVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELC 502
L M + D +N ++ GY + G+ + AL +MID + + TFV L
Sbjct: 341 LFEVMKKK----DVVAWNAMISGYAQHGNADKALCLFREMIDNKI---RPDWITFVAVLL 393
Query: 503 A 503
A
Sbjct: 394 A 394
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 50/269 (18%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVE 174
I+ + + GD+ A H+F A G A + A++ ++A +V LA+A++ K+ V
Sbjct: 193 ISGYIECGDLEKASHFFKVAPVRGVVAWT--AMITGYMKAKKVELAEAMF----KDMTVN 246
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PN---------------AITYNTMI 216
++ T+ MI G+ + E K+F M E PN A+ I
Sbjct: 247 KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI 306
Query: 217 HGL--------------------CKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYS 256
H + CK GE+ A ++F + DVV + +I GY+
Sbjct: 307 HQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-----KKDVVAWNAMISGYA 361
Query: 257 KRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM-RLKGIKDNV 315
+ G +AL +EM + +P+ +T+ A++ +G V+ M R ++
Sbjct: 362 QHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQP 421
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
T M+ G+ EEA+K ++ M R
Sbjct: 422 DHYTCMVDLLGRAGKLEEALKLIRSMPFR 450
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 215/504 (42%), Gaps = 34/504 (6%)
Query: 34 FSCYLTPSLVTQVIKNTHNPHH--ALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHS 91
F ++PSLV +VI HH AL FFNWA+ QP YSH Y +I L
Sbjct: 41 FRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQ-QPG---YSHDSISYHSIFKSLSLSR 96
Query: 92 LFSTADSLLR--RSNKLSDFLASKFINAFGDR---GDIRGAIHW-----FHKAKASGPCA 141
FS D+L + +SNK+ L S + D G + W F + P
Sbjct: 97 QFSAMDALFKQVKSNKI--LLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDV 154
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
CN +L L + A+ ++ ++ + V + + I FC+ ++ D
Sbjct: 155 --CNRLLAGLTSDGCYDYAQKLFVKMRHKG-VSLNTLGFGVYIGWFCRSSETNQLLRLVD 211
Query: 202 EMRCEP----NAITYNTMIHGLCK-KGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYS 256
E++ +I ++H LCK EMD A + + C+PD + + + + +
Sbjct: 212 EVKKANLNINGSIIALLILHSLCKCSREMD-AFYILEEL-RNIDCKPDFMAYRVIAEAFV 269
Query: 257 KRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM-RLKGIKDNV 315
G + E +K+ ++ G P Y A I L + + EAK + + K DN
Sbjct: 270 VTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDND 329
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
+ L G + A++ + MVS G ++ S + C+ K +
Sbjct: 330 ILDA--LIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYEL 387
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
+ +K + S++ + L ++ E+ L+ M + G +P+ Y+ +I CK +
Sbjct: 388 LSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAE- 446
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYC 495
++ ++L M G ++ T YN L+ E+G+ E +L+ M+++ ++ Y
Sbjct: 447 MIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYM 506
Query: 496 TFVKELCAKGKVKE--EYLKRCVD 517
+ ++ LC + K++ E ++C++
Sbjct: 507 SLIEGLCKETKIEAAMEVFRKCME 530
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 13/240 (5%)
Query: 143 SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDE 202
S + ++ L +A RV + ++ KE L PDV Y +I CK M+ A+K++DE
Sbjct: 399 SYSLMISFLCKAGRVRESYTALQEMKKEGLA-PDVSLYNALIEACCKAEMIRPAKKLWDE 457
Query: 203 M---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRG 259
M C+ N TYN +I L ++GE + ++R+F++ E + PD + +LI+G K
Sbjct: 458 MFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLE-RGIEPDETIYMSLIEGLCKET 516
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIE---GLCLSGNVDEAKRMMSKMRLKGIKDNVA 316
+++ A+ ++ E+ VT L E LC +G+ EA ++ +R + ++
Sbjct: 517 KIEAAMEVFRKCMER--DHKTVTRRVLSEFVLNLCSNGHSGEASQL---LREREHLEHTG 571
Query: 317 TNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREM 376
+ +LK E I+HM+ + L S ++ +C P + +R +
Sbjct: 572 AHVVLLKCVADAKEVEIGIRHMQWIKEVSPSLVHTISSDLLASFCSSSDPDSILPFIRAI 631
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 93/176 (52%), Gaps = 1/176 (0%)
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALN 266
P T + + LC+ + D ++ + + SK ++ +++ +I K G V+E+
Sbjct: 360 PAIRTLSKLSKNLCRHDKSDHLIKAYELLS-SKGYFSELQSYSLMISFLCKAGRVRESYT 418
Query: 267 CMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC 326
++EM+++G P+V YNALIE C + + AK++ +M ++G K N+ T +++
Sbjct: 419 ALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLS 478
Query: 327 MVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMK 382
G +EE+++ +M+ RG++ D Y ++ CK K A+ + R+ + + K
Sbjct: 479 EEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHK 534
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 161/367 (43%), Gaps = 25/367 (6%)
Query: 30 PLKKFSCYLT----PSLVTQVIKNTHNPHHALFFFNWASNPQP---------NPNNYSHP 76
P+++FS T P+ VT I +L N NP+ +
Sbjct: 16 PIRRFSSAATVVSEPTAVTAAISPPQKSLTSLV--NGERNPKRIVEKFKKACESERFRTN 73
Query: 77 RSCYAAITDVLLSHSLFSTADSLLRRSNKLSDF----LASKFINAFGDRGDIRGAIHWFH 132
+ Y L++ + +L K D A++ I+ +G G A F
Sbjct: 74 IAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFE 133
Query: 133 KA--KASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKM 190
+ + LS NA+L + + ++ + +++++ + ++PD+ +Y T+I+ C+
Sbjct: 134 EMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEK 193
Query: 191 GMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVT 247
+ A + DE+ +P+ +T+NT++ KG+ + ++ + E K+ D+ T
Sbjct: 194 DSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVE-KNVAIDIRT 252
Query: 248 FTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR 307
+ + G + + +E +N E++ G +P+V ++NA+I G G +DEA+ ++
Sbjct: 253 YNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIV 312
Query: 308 LKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPS 367
G + + AT +L C G E AI+ KE S+ + +V+E K K
Sbjct: 313 KHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKRE 372
Query: 368 EAVSILR 374
EA I++
Sbjct: 373 EAEEIVK 379
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 131/262 (50%), Gaps = 4/262 (1%)
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEP 207
LV A R++ + I ++ K + + F +I + K GM E+A+KVF+EM C+
Sbjct: 84 LVAAKRLHYVEEILEEQKKYRDMSKEGFA-ARIISLYGKAGMFENAQKVFEEMPNRDCKR 142
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
+ +++N ++ + D +FN S +PD+V++ TLI ++ + EA+
Sbjct: 143 SVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVAL 202
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM 327
+ E++ +G +P++VT+N L+ L G + + + +KM K + ++ T + L G
Sbjct: 203 LDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLAN 262
Query: 328 VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSS 387
+S+E + E+ + G+ DV +++ ++ GK EA + +E+V +P ++
Sbjct: 263 EAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKAT 322
Query: 388 FNAVFRVLVAERKLEEAVLLLK 409
F + + E A+ L K
Sbjct: 323 FALLLPAMCKAGDFESAIELFK 344
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 133/260 (51%), Gaps = 13/260 (5%)
Query: 146 AVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR- 204
AV+ V+ ++N+A+ +Y ++V E +EPDV Y +I F G V+ A + M+
Sbjct: 580 AVISSFVKLGQLNMAEEVYKEMV-EYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKE 638
Query: 205 --CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAES--KSCRPDVVTFTTLIDGYSKRGE 260
N++ YN++I K G +D A ++ + +S K+ PDV T +I+ YS+R
Sbjct: 639 AGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSM 698
Query: 261 VQEALNCMKEMQEQGCQPNVVTYNALIEGLCL---SGNVDEAKRMMSKMRLKGIKDNVAT 317
V++A M+++G + N T+ + LC+ +G +EA ++ +MR I + +
Sbjct: 699 VRKAEAIFDSMKQRG-EANEFTFAMM---LCMYKKNGRFEEATQIAKQMREMKILTDPLS 754
Query: 318 NTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMV 377
S+L F + GR +EA++ KEMVS G+ D + + K+G +AV + E+
Sbjct: 755 YNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIR 814
Query: 378 AKRMKPSVSSFNAVFRVLVA 397
K +K + + + LV
Sbjct: 815 KKEIKRGLELWISTLSSLVG 834
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 187/406 (46%), Gaps = 23/406 (5%)
Query: 81 AAITDVLLSHSLFSTADSLLRR---SNKLSDFLASKFINAFGDRGDIRGAIHWFHK-AKA 136
+A+T + + + + S +R + +S S I+A+G+RG + A F +
Sbjct: 441 SALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEV 500
Query: 137 SGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESA 196
+ + N ++ + A +++ ++ V PD TY T+++ M
Sbjct: 501 NKRTVIEYNVMIKAYGISKSCEKACELFESMMSYG-VTPDKCTYNTLVQILASADMPHKG 559
Query: 197 RKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLID 253
R ++MR + I Y +I K G+++ A V+ E + PDVV + LI+
Sbjct: 560 RCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEY-NIEPDVVVYGVLIN 618
Query: 254 GYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRL---KG 310
++ G VQ+A++ ++ M+E G N V YN+LI+ G +DEA+ + K+ K
Sbjct: 619 AFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKT 678
Query: 311 IKDNVATNTSMLKGFC---MVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPS 367
+V T+ M+ + MV ++E MK+ RG + + +++++ Y K G+
Sbjct: 679 QYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQ---RG-EANEFTFAMMLCMYKKNGRFE 734
Query: 368 EAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPN---FLSYS 424
EA I ++M ++ S+N+V + + + +EAV K M G P+ F S
Sbjct: 735 EATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLG 794
Query: 425 IVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLG-GYCED 469
++ L K ++ +EE+ ++ G L + + L+G G C D
Sbjct: 795 TILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIGDCVD 840
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 161/392 (41%), Gaps = 57/392 (14%)
Query: 124 IRGAIHW------FHKAKASGPCALSC---NAVLGVLVRANRVNLAKAIYDQVVKEALVE 174
++ IHW F K+ G L+ N +L +L +A + ++++D+++++ ++
Sbjct: 161 LKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKG-IK 219
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRV 231
P TY T+I + K G+ A +M +P+ +T ++ K E A
Sbjct: 220 PINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEF 279
Query: 232 FNRF------AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNA 285
F ++ A+S C T+ T+ID Y K G+++EA K M E+G P VT+N
Sbjct: 280 FKKWSCDENKADSHVCLSSY-TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNT 338
Query: 286 LIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG 345
+I +G + E +M M+L D N ++ E A + KEM G
Sbjct: 339 MIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNI-LISLHTKNNDIERAGAYFKEMKDDG 397
Query: 346 MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAV 405
+ D +Y ++ + EA ++ EM ++ + +A+ R+ V LE++
Sbjct: 398 LKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSW 457
Query: 406 LLLK------NMPRMGCSPNFLSYS----------IVICGLCKVKGRMQLVE-------- 441
K NM G S N +Y + IC C+ + ++E
Sbjct: 458 SWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFIC--CQEVNKRTVIEYNVMIKAY 515
Query: 442 ----------ELVSSMLQSGHNLDATMYNCLL 463
EL SM+ G D YN L+
Sbjct: 516 GISKSCEKACELFESMMSYGVTPDKCTYNTLV 547
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/412 (20%), Positives = 171/412 (41%), Gaps = 43/412 (10%)
Query: 123 DIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTY 180
DI A +F + K G P +S +L + V A+ + ++ + VE D +T
Sbjct: 382 DIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDN-VEIDEYTQ 440
Query: 181 TTMIRGFCKMGMVESARKVFDEMRCEPNAIT--YNTMIHGLCKKGEMDGAMRVF------ 232
+ + R + + M+E + F N + Y+ I ++G + A RVF
Sbjct: 441 SALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEV 500
Query: 233 ------------NRFAESKSCR---------------PDVVTFTTLIDGYSKRGEVQEAL 265
+ SKSC PD T+ TL+ + +
Sbjct: 501 NKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGR 560
Query: 266 NCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGF 325
+++M+E G + + Y A+I G ++ A+ + +M I+ +V ++ F
Sbjct: 561 CYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAF 620
Query: 326 CMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA---KRMK 382
G ++A+ +++ M G+ + Y+ ++ Y K+G EA +I R+++ K
Sbjct: 621 ADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQY 680
Query: 383 PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEE 442
P V + N + + + +A + +M + G N ++++++C + K GR + +
Sbjct: 681 PDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLC-MYKKNGRFEEATQ 738
Query: 443 LVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTY 494
+ M + D YN +LG + DG + A++T +M+ + T+
Sbjct: 739 IAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTF 790
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 182/436 (41%), Gaps = 54/436 (12%)
Query: 23 LQTPDSEPLKKFSCYLTPSLVTQVIKNTH----NPHHALFFFNWASNPQPNPNNYSHPRS 78
LQ E L +L+ L+ +V+K NP L F+ +AS + + H
Sbjct: 54 LQVELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIR----GFYHSSF 109
Query: 79 CYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASK-----FINAFGDRGDIRGAIHWFHK 133
+ +L + F LL + + L S + +R + F K
Sbjct: 110 SLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWK 169
Query: 134 AKASGPCALSC---NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKM 190
K P NA+L L + + A+ +Y + + +PD+ T+ ++ G+
Sbjct: 170 FKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQ--FQPDLQTFNILLSGWKSS 227
Query: 191 GMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTT 250
E+ + +P+ +TYN++I CK E++ A ++ ++ E + PDV+T+TT
Sbjct: 228 EEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEET-PDVITYTT 286
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG 310
+I G G+ +A +KEM+E GC P+V YNA I C++ + +A +++ +M KG
Sbjct: 287 VIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKG 346
Query: 311 IKDNVATNTSMLKGFCM---VGRSEE--------------------------------AI 335
+ N T + + +GRS E A+
Sbjct: 347 LSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAM 406
Query: 336 KHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVL 395
+ ++MV +G V+++ C + K EA L EMV K +PS SF + ++
Sbjct: 407 RLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLM 466
Query: 396 VAERKLEEAVLLLKNM 411
K +E L++ M
Sbjct: 467 ELANKHDEVNNLIQKM 482
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 121/236 (51%), Gaps = 8/236 (3%)
Query: 212 YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM 271
+N ++ LC++ M A V++ +PD+ TF L+ G+ E + MK
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQ--FQPDLQTFNILLSGWKSSEEAEAFFEEMKG- 239
Query: 272 QEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRS 331
+G +P+VVTYN+LI+ C +++A +++ KMR + +V T T+++ G ++G+
Sbjct: 240 --KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQP 297
Query: 332 EEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAV 391
++A + +KEM G DV AY+ + +C + +A ++ EMV K + P+ +++N
Sbjct: 298 DKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLF 357
Query: 392 FRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLC---KVKGRMQLVEELV 444
FRVL L + L M C PN S +I KV M+L E++V
Sbjct: 358 FRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMV 413
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 156/319 (48%), Gaps = 20/319 (6%)
Query: 161 KAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLC 220
+ ++ Q + E D F TT+I + K+G + AR+VFDEM + + +N MI G
Sbjct: 102 RLLHSQFFRSGF-ESDSFCCTTLITAYAKLGALCCARRVFDEM-SKRDVPVWNAMITGYQ 159
Query: 221 KKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALN---CMKEMQEQGCQ 277
++G+M AM +F+ R +V ++TT+I G+S+ G EAL CM+ +++ +
Sbjct: 160 RRGDMKAAMELFDSMP-----RKNVTSWTTVISGFSQNGNYSEALKMFLCME--KDKSVK 212
Query: 278 PNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKH 337
PN +T +++ G ++ +R+ R G DN+ + ++ + G + A +
Sbjct: 213 PNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRL 272
Query: 338 MKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVA 397
+E+ G ++ +++ ++ GK EA+++ +M+ + KP +F + V
Sbjct: 273 FEEL---GNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVH 329
Query: 398 ERKLEEAVLLLKNMPRMG-CSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDA 456
+ + L K+M + SP Y +I L +V G++Q +L+ +M DA
Sbjct: 330 GGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRV-GKLQEAYDLIKTMPMKP---DA 385
Query: 457 TMYNCLLGGYCEDGDEEMA 475
++ LLG G+ E+A
Sbjct: 386 VVWGTLLGACSFHGNVEIA 404
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALN 266
P ITYN+MI G CK+ +D A R+ + A SK C PDVVTF+TLI+GY K V +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMA-SKGCSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 267 CMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC 326
EM +G N VTY LI G C G++D A+ ++++M G+ + T ML G C
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRV 231
P TY +MI GFCK V+ A+++ D M C P+ +T++T+I+G CK +D M +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 232 FNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLC 291
F + + VT+TTLI G+ + G++ A + + EM G P+ +T++ ++ GLC
Sbjct: 68 FCEM-HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 79/136 (58%)
Query: 278 PNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKH 337
P +TYN++I+G C VD+AKRM+ M KG +V T ++++ G+C R + ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 338 MKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVA 397
EM RG+ + Y+ +++ +C++G A +L EM++ + P +F+ + L +
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 398 ERKLEEAVLLLKNMPR 413
+++L +A +L+++ +
Sbjct: 128 KKELRKAFAILEDLQK 143
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 73/134 (54%)
Query: 243 PDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRM 302
P +T+ ++IDG+ K+ V +A + M +GC P+VVT++ LI G C + VD +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 303 MSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCK 362
+M +GI N T T+++ GFC VG + A + EM+S G+ D + ++ C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 363 IGKPSEAVSILREM 376
+ +A +IL ++
Sbjct: 128 KKELRKAFAILEDL 141
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ N+++ + +RV+ AK + D + + PDV T++T+I G+CK V++ +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG-CSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSC--RPDVVTFTTLID 253
+F EM N +TY T+IHG C+ G++D A + N E SC PD +TF ++
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLN---EMISCGVAPDYITFHCMLA 123
Query: 254 GYSKRGEVQEALNCMKEMQE 273
G + E+++A ++++Q+
Sbjct: 124 GLCSKKELRKAFAILEDLQK 143
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%)
Query: 317 TNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREM 376
T SM+ GFC R ++A + + M S+G DV +S ++N YCK + + I EM
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 377 VAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVK 434
+ + + ++ + L+ A LL M G +P+++++ ++ GLC K
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 129
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Query: 353 YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
Y+ +++ +CK + +A +L M +K P V +F+ + ++++ + + M
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 413 RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDE 472
R G N ++Y+ +I G C+V G + ++L++ M+ G D ++C+L G C +
Sbjct: 73 RRGIVANTVTYTTLIHGFCQV-GDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 473 EMALKTVYDM 482
A + D+
Sbjct: 132 RKAFAILEDL 141
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 71/136 (52%), Gaps = 1/136 (0%)
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
M+ + P+ ++N++ + ++++A +L +M GCSP+ +++S +I G CK K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAK- 59
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYC 495
R+ E+ M + G + Y L+ G+C+ GD + A + +MI + T+
Sbjct: 60 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFH 119
Query: 496 TFVKELCAKGKVKEEY 511
+ LC+K ++++ +
Sbjct: 120 CMLAGLCSKKELRKAF 135
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 134 AKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMV 193
+K P ++ + ++ +A RV+ I+ ++ + +V V TYTT+I GFC++G +
Sbjct: 38 SKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV-TYTTLIHGFCQVGDL 96
Query: 194 ESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKS 240
++A+ + +EM P+ IT++ M+ GLC K E+ A + +S+
Sbjct: 97 DAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSED 146
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 142/302 (47%), Gaps = 16/302 (5%)
Query: 163 IYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKK 222
I+ Q+ K E DV+ ++I + G + A +FD + EP+ +++N++I G K
Sbjct: 137 IHAQITKLG-YENDVYAVNSLINSYAVTGNFKLAHLLFDRIP-EPDDVSWNSVIKGYVKA 194
Query: 223 GEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVT 282
G+MD A+ +F + AE + +++TT+I GY + +EAL EMQ +P+ V+
Sbjct: 195 GKMDIALTLFRKMAEK-----NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVS 249
Query: 283 YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMV 342
+ G +++ K + S + I+ + ++ + G EEA++ K +
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 343 SRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLE 402
+ V+A++ +++ Y G EA+S EM +KP+V +F AV +E
Sbjct: 310 KKS----VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365
Query: 403 EAVLLLKNMPR-MGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNC 461
E L+ +M R P Y ++ + GR L++E + + +A ++
Sbjct: 366 EGKLIFYSMERDYNLKPTIEHYGCIV----DLLGRAGLLDEAKRFIQEMPLKPNAVIWGA 421
Query: 462 LL 463
LL
Sbjct: 422 LL 423
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 141/342 (41%), Gaps = 59/342 (17%)
Query: 164 YDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEP---NAITY-------- 212
Y Q+V + PD F + MIRGF E + ++ M C NA T+
Sbjct: 67 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS 126
Query: 213 ---------------------------NTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDV 245
N++I+ G A +F+R E PD
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE-----PDD 181
Query: 246 VTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSK 305
V++ ++I GY K G++ AL ++M E+ N +++ +I G + EA ++ +
Sbjct: 182 VSWNSVIKGYVKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHE 237
Query: 306 MRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGK 365
M+ ++ + + + L +G E+ + + +D V+++ Y K G+
Sbjct: 238 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGE 297
Query: 366 PSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSI 425
EA+ + + + K SV ++ A+ EA+ M +MG PN ++++
Sbjct: 298 MEEALEVFKNI----KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTA 353
Query: 426 VICGLCKVKGRMQLVEE--LVSSMLQSGHNLDATM--YNCLL 463
V+ C G LVEE L+ ++ +NL T+ Y C++
Sbjct: 354 VLTA-CSYTG---LVEEGKLIFYSMERDYNLKPTIEHYGCIV 391
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 120/272 (44%), Gaps = 51/272 (18%)
Query: 109 FLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVV 168
+ + IN++ G+ + A F + P +S N+V+ V+A ++++A ++ +
Sbjct: 151 YAVNSLINSYAVTGNFKLAHLLFDRIPE--PDDVSWNSVIKGYVKAGKMDIALTLFRK-- 206
Query: 169 KEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPN---------------AI 210
+ E + ++TTMI G+ + M + A ++F EM+ EP+ A+
Sbjct: 207 ---MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGAL 263
Query: 211 TYNTMIHGLCKK--------------------GEMDGAMRVFNRFAESKSCRPDVVTFTT 250
IH K GEM+ A+ VF + V +T
Sbjct: 264 EQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK-----KKSVQAWTA 318
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM-RLK 309
LI GY+ G +EA++ EMQ+ G +PNV+T+ A++ +G V+E K + M R
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEM 341
+K + ++ G +EA + ++EM
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 132/280 (47%), Gaps = 6/280 (2%)
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVF 232
+V Y ++ F K +E + K+FDEM +P+ T+ T+I + G A+ F
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 233 NRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCL 292
+ + S C PD VT +ID Y + G V AL+ + + + + VT++ LI +
Sbjct: 234 EKMS-SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGV 292
Query: 293 SGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKA 352
SGN D + +M+ G+K N+ ++ R +A K++++ G +
Sbjct: 293 SGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWST 352
Query: 353 YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
Y+ +V Y + +A++I REM K + +V +N + + R ++EA + ++M
Sbjct: 353 YAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMK 412
Query: 413 R-MGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSG 451
C P+ ++S +I + GR+ E + M ++G
Sbjct: 413 NCETCDPDSWTFSSLIT-VYACSGRVSEAEAALLQMREAG 451
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 116/229 (50%), Gaps = 1/229 (0%)
Query: 199 VFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
+ + M+ I YN + K +++ + ++F+ E + +PD TFTT+I +
Sbjct: 165 LLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLE-RGIKPDNATFTTIISCARQN 223
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
G + A+ ++M GC+P+ VT A+I+ +GNVD A + + R + + + T
Sbjct: 224 GVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTF 283
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
+++++ + + G + + +EM + G+ ++ Y+ +++ + +P +A I ++++
Sbjct: 284 STLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLIT 343
Query: 379 KRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI 427
P+ S++ A+ R R ++A+ + + M G S + Y+ ++
Sbjct: 344 NGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL 392
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 154/363 (42%), Gaps = 52/363 (14%)
Query: 85 DVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCAL 142
D+ S LF D +L R K + + I+ G + A+ WF K + G P +
Sbjct: 190 DLEKSEKLF---DEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNV 246
Query: 143 SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDE 202
+ A++ RA V++A ++YD+ E D T++T+IR + G + +++E
Sbjct: 247 TMAAMIDAYGRAGNVDMALSLYDRARTEKW-RIDAVTFSTLIRIYGVSGNYDGCLNIYEE 305
Query: 203 MRC---EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRG 259
M+ +PN + YN +I + + A ++ + P+ T+ L+ Y +
Sbjct: 306 MKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLI-TNGFTPNWSTYAALVRAYGRAR 364
Query: 260 EVQEALNCMKEMQEQG------------------------------------CQPNVVTY 283
+AL +EM+E+G C P+ T+
Sbjct: 365 YGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTF 424
Query: 284 NALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVS 343
++LI SG V EA+ + +MR G + + TS+++ + + ++ ++ +++
Sbjct: 425 SSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLE 484
Query: 344 RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEE 403
G+ D + ++N + PSE + L V K KP + V ++LV E+ EE
Sbjct: 485 LGITPDDRFCGCLLNVMTQT--PSEEIGKLIGCVEK-AKPKLGQ---VVKMLVEEQNCEE 538
Query: 404 AVL 406
V
Sbjct: 539 GVF 541
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 112/255 (43%), Gaps = 7/255 (2%)
Query: 231 VFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGL 290
V N E+ +V+ + + + K +++++ EM E+G +P+ T+ +I
Sbjct: 161 VLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCA 220
Query: 291 CLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDV 350
+G A KM G + + T +M+ + G + A+ + +D
Sbjct: 221 RQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDA 280
Query: 351 KAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKN 410
+S ++ Y G ++I EM A +KP++ +N + + ++ +A ++ K+
Sbjct: 281 VTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKD 340
Query: 411 MPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVS---SMLQSGHNLDATMYNCLLGGYC 467
+ G +PN+ +Y+ L + GR + ++ ++ M + G +L +YN LL
Sbjct: 341 LITNGFTPNWSTYA----ALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCA 396
Query: 468 EDGDEEMALKTVYDM 482
++ + A + DM
Sbjct: 397 DNRYVDEAFEIFQDM 411
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 169/387 (43%), Gaps = 20/387 (5%)
Query: 132 HKAKASGPCALSCNAVLGVL---VRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIR--G 186
KA + L AVL L ++ NR A I++ + K+ EP TYT + + G
Sbjct: 96 RKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLG 155
Query: 187 FCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRP 243
CK + A +F+ M E P Y ++I K +D A C+P
Sbjct: 156 NCKQP--DQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKP 213
Query: 244 DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMM 303
DV TFT LI K G + + EM G + VTYN +I+G +G +E + ++
Sbjct: 214 DVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVL 273
Query: 304 SKMRLKGIK-DNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR----GMDLDVKAYSVIVN 358
+ M G +V T S++ + GR+ ++ M+ SR G+ D+ +++++
Sbjct: 274 ADMIEDGDSLPDVCTLNSIIGSYGN-GRN---MRKMESWYSRFQLMGVQPDITTFNILIL 329
Query: 359 EYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSP 418
+ K G + S++ M + + ++N V ++E+ + + M G P
Sbjct: 330 SFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKP 389
Query: 419 NFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKT 478
N ++Y ++ K G + ++ ++ ++ S LD +NC++ Y + GD +
Sbjct: 390 NSITYCSLVNAYSKA-GLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKEL 448
Query: 479 VYDMIDKSFLFNKDTYCTFVKELCAKG 505
M ++ +K T+ T +K A G
Sbjct: 449 YIQMEERKCKPDKITFATMIKTYTAHG 475
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 119/282 (42%), Gaps = 8/282 (2%)
Query: 174 EPDVFTYTTMIRGFCKMGMVESARKVFDEMR-----CEPNAITYNTMIHGLCKKGEMDGA 228
+PDVFT+T +I CK+G + + + EM C + +TYNT+I G K G +
Sbjct: 212 KPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGC--STVTYNTIIDGYGKAGMFEEM 269
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
V E PDV T ++I Y +++ + Q G QP++ T+N LI
Sbjct: 270 ESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILIL 329
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
+G + +M M + T +++ F GR E+ ++M +G+
Sbjct: 330 SFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKP 389
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
+ Y +VN Y K G + S+LR++V + FN + L L
Sbjct: 390 NSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELY 449
Query: 409 KNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS 450
M C P+ ++++ +I G V+EL M+ S
Sbjct: 450 IQMEERKCKPDKITFATMI-KTYTAHGIFDAVQELEKQMISS 490
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 162/396 (40%), Gaps = 54/396 (13%)
Query: 36 CYLTPS--LVTQVIKNTHNPHHALF-FFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSL 92
C + PS LV +++ N F FF WA Q Y Y ++ +L
Sbjct: 121 CDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQ----GYVRSVREYHSMISILGKMRK 176
Query: 93 FSTADSLLRRSNKLSDFLASK-----FINAFGDRGDIRGAIHWFHKAKA----------- 136
F TA +L+ K S L + I + D+ AI+ FH K
Sbjct: 177 FDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQ 236
Query: 137 ---SGPCALSCNAVLGVLVRANR---------VNLAKAIYDQVV---KEAL--------- 172
S C + G L+ N+ N+ + V+ +EA
Sbjct: 237 SLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNV 296
Query: 173 -VEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGA 228
V+ DV +Y++MI + K G + K+FD M+ EP+ YN ++H L K + A
Sbjct: 297 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 356
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
+ E K P+VVT+ +LI K + +EA EM E+G P + TY+A +
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR 416
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
L V E +++KMR G + V T +++ C + + EM + +
Sbjct: 417 ILRTGEEVFE---LLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGP 473
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPS 384
D+ +Y V+++ GK EA +EM K M+P+
Sbjct: 474 DLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 13/241 (5%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKAS--GPCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
S I+ + G + + F + K P NAV+ L +A+ V+ A+ + + +
Sbjct: 306 SSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEE 365
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMD 226
E +EP+V TY ++I+ CK E A++VFDEM + P TY+ + + + GE
Sbjct: 366 EKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR-ILRTGE-- 422
Query: 227 GAMRVFNRFAESK--SCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
VF A+ + C P V T+ LI + + L EM+E+ P++ +Y
Sbjct: 423 ---EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYI 479
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
+I GL L+G ++EA +M+ KG++ N + F +E+ I K V++
Sbjct: 480 VMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYAEQRITDSKGEVNK 539
Query: 345 G 345
G
Sbjct: 540 G 540
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 10/245 (4%)
Query: 212 YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTL---IDGYSKRGEVQEALNCM 268
Y++MI L K + D A + + E + P +V TL I Y +V +A+N
Sbjct: 164 YHSMISILGKMRKFDTAWTLID---EMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTF 220
Query: 269 KEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC-M 327
+ + + + +L+ LC NV +A ++ + K D + N +L G+C +
Sbjct: 221 HAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNI-VLNGWCNV 279
Query: 328 VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSS 387
+G EA + EM + G+ DV +YS +++ Y K G ++ + + M + ++P
Sbjct: 280 IGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKV 339
Query: 388 FNAVFRVLVAERKLEEAVLLLKNM-PRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSS 446
+NAV L + EA L+K M G PN ++Y+ +I LCK + + + +++
Sbjct: 340 YNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR-KTEEAKQVFDE 398
Query: 447 MLQSG 451
ML+ G
Sbjct: 399 MLEKG 403
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 168/396 (42%), Gaps = 50/396 (12%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESAR---K 198
+ +A++G R NR ++ ++K+ ++ PD F + +++G G VE+ +
Sbjct: 147 FTWSAMIGAYSRENRWREVAKLFRLMMKDGVL-PDDFLFPKILQGCANCGDVEAGKVIHS 205
Query: 199 VFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
V ++ N+++ K GE+D A + F R E DV+ + +++ Y +
Sbjct: 206 VVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER-----DVIAWNSVLLAYCQN 260
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
G+ +EA+ +KEM+++G P +VT+N LI G G D A +M KM GI +V T
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 319 TSMLKGFCMVGRSEEAIKHMKEM-----------------------------------VS 343
T+M+ G G +A+ ++M V
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 344 RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEE 403
G DV + +V+ Y K GK +A + + K V ++N++ +
Sbjct: 381 MGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGK 436
Query: 404 AVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGH-NLDATMYNCL 462
A L M PN ++++ +I G K G +L M + G + +N +
Sbjct: 437 AYELFTRMQDANLRPNIITWNTMISGYIK-NGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Query: 463 LGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
+ GY ++G ++ AL+ M F+ N T + +
Sbjct: 496 IAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 155/344 (45%), Gaps = 19/344 (5%)
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRV 231
EPDVF T ++ + K G + ARKVFD MR E N T++ MI ++ ++
Sbjct: 110 FTEPDVFVETKLLSMYAKCGCIADARKVFDSMR-ERNLFTWSAMIGAYSRENRWREVAKL 168
Query: 232 FNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLC 291
F R PD F ++ G + G+V+ + + G + N+++
Sbjct: 169 F-RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 292 LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVK 351
G +D A + +MR +D +A N S+L +C G+ EEA++ +KEM G+ +
Sbjct: 228 KCGELDFATKFFRRMRE---RDVIAWN-SVLLAYCQNGKHEEAVELVKEMEKEGISPGLV 283
Query: 352 AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM 411
+++++ Y ++GK A+ ++++M + V ++ A+ L+ +A+ + + M
Sbjct: 284 TWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Query: 412 PRMGCSPNFLSY--SIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
G PN ++ ++ C KV + V + M G D + N L+ Y +
Sbjct: 344 FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKM---GFIDDVLVGNSLVDMYSKC 400
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYC--TFVKELCAKGKVKEEY 511
G E A K V+D + NKD Y + + C G + Y
Sbjct: 401 GKLEDARK-VFDSVK-----NKDVYTWNSMITGYCQAGYCGKAY 438
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 148/337 (43%), Gaps = 52/337 (15%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
L N+++ + + ++ A+ ++D V + DV+T+ +MI G+C+ G A ++F
Sbjct: 388 LVGNSLVDMYSKCGKLEDARKVFDSVKNK-----DVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 202 EMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
M+ PN IT+NTMI G K G+ AM +F R + + + T+ +I GY +
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTY----------------------------------- 283
G+ EAL ++MQ PN VT
Sbjct: 503 GKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVK 562
Query: 284 NALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVS 343
NAL + SG+++ ++ + M K ++ T S++ G+ + G A+ +M +
Sbjct: 563 NALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKT 618
Query: 344 RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK-RMKPSVSSFNAVFRVLVAERKLE 402
+G+ + S I+ + +G E + + + P++ +A+ + +LE
Sbjct: 619 QGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLE 678
Query: 403 EAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQL 439
EA+ ++ M +P + S+ + G C++ G + +
Sbjct: 679 EALQFIQEMNIQSETPIWESF---LTG-CRIHGDIDM 711
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 166/386 (43%), Gaps = 37/386 (9%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ N ++G + + + A + Q ++ + DVFT+T MI G GM A
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAAMDLM-QKMETFGITADVFTWTAMISGLIHNGMRYQALD 338
Query: 199 VFDEMRCE---PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCR------PDVVTFT 249
+F +M PNA+T + + ++V N+ +E S DV+
Sbjct: 339 MFRKMFLAGVVPNAVTIMSAVSAC-------SCLKVINQGSEVHSIAVKMGFIDDVLVGN 391
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
+L+D YSK G++++A ++ + +V T+N++I G C +G +A + ++M+
Sbjct: 392 SLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDA 447
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG-MDLDVKAYSVIVNEYCKIGKPSE 368
++ N+ T +M+ G+ G EA+ + M G + + +++I+ Y + GK E
Sbjct: 448 NLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDE 507
Query: 369 AVSILREMVAKRMKPS----VSSFNAVFRVLVAERKLE-EAVLLLKNMPRMGCSPNFLSY 423
A+ + R+M R P+ +S A +L A+ E +L +N+ + N L+
Sbjct: 508 ALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTD 567
Query: 424 SIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMI 483
+ G E ++ D +N L+GGY G AL M
Sbjct: 568 TYAKSGDI----------EYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMK 617
Query: 484 DKSFLFNKDTYCTFVKELCAKGKVKE 509
+ N+ T + + G V E
Sbjct: 618 TQGITPNRGTLSSIILAHGLMGNVDE 643
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 167/376 (44%), Gaps = 16/376 (4%)
Query: 135 KASGPCALSCNAVLGVL---VRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMG 191
K G L VL L + A R A +++ + ++ +P+V Y +I K
Sbjct: 105 KKKGSKKLLPRTVLESLHERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCK 164
Query: 192 MVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTF 248
E A ++F EM C N Y ++ + G D A + R S +C+PDV T+
Sbjct: 165 QPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTY 224
Query: 249 TTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRL 308
+ LI + + + + + +M+ QG +PN +TYN LI+ + E + + +M
Sbjct: 225 SILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLG 284
Query: 309 K-GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPS 367
+ K + T S L+ F G+ E ++ S G++ +++ ++++++ Y K G
Sbjct: 285 EDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYK 344
Query: 368 EAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI 427
+ +++ M ++ ++N V L++ L + M P+ + +
Sbjct: 345 KMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPS----CVTL 400
Query: 428 CGLCKVKGRMQLVEEL---VSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMID 484
C L + GR +++ + + S LD +NCL+ Y ++ +K V ++++
Sbjct: 401 CSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGR-MEKFAEMKGVLELME 459
Query: 485 -KSFLFNKDTYCTFVK 499
K F +K TY T VK
Sbjct: 460 KKGFKPDKITYRTMVK 475
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 128/301 (42%), Gaps = 4/301 (1%)
Query: 146 AVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR- 204
A++ R+ R + A + +++ +PDV TY+ +I+ F ++ + + + +MR
Sbjct: 190 ALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRR 249
Query: 205 --CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQ 262
PN ITYNT+I K + C+PD T + + + G+++
Sbjct: 250 QGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIE 309
Query: 263 EALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSML 322
NC ++ Q G +PN+ T+N L++ SGN + +M M+ + T ++
Sbjct: 310 MMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVI 369
Query: 323 KGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMK 382
F G ++ + M S + +V Y + K + +LR + ++
Sbjct: 370 DAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIR 429
Query: 383 PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEE 442
+ FN + K E +L+ M + G P+ ++Y ++ ++ G V+E
Sbjct: 430 LDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY-RISGMTTHVKE 488
Query: 443 L 443
L
Sbjct: 489 L 489
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 88/193 (45%), Gaps = 7/193 (3%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
+ AFG G I + + K ++SG P + N +L ++ A+ + + K
Sbjct: 299 LRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHY 358
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDGAM 229
+ TY +I F + G ++ +F M+ E P+ +T +++ + + D
Sbjct: 359 -SWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIG 417
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
V RF E+ R D+V F L+D Y + + E ++ M+++G +P+ +TY +++
Sbjct: 418 GVL-RFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKA 476
Query: 290 LCLSGNVDEAKRM 302
+SG K +
Sbjct: 477 YRISGMTTHVKEL 489
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + + N+ L ++ + + Y++ + + +EP++ T+ ++ + K G +
Sbjct: 290 PDSWTMNSTLRAFGGNGQIEMMENCYEKF-QSSGIEPNIRTFNILLDSYGKSGNYKKMSA 348
Query: 199 VFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
V + M+ +TYN +I + G++ +F R +S+ P VT +L+ Y
Sbjct: 349 VMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLF-RLMQSERIFPSCVTLCSLVRAY 407
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+ + + ++ ++ + ++V +N L++ E K ++ M KG K +
Sbjct: 408 GRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDK 467
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEM 341
T +M+K + + G + H+KE+
Sbjct: 468 ITYRTMVKAYRISGMT----THVKEL 489
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 176/406 (43%), Gaps = 44/406 (10%)
Query: 143 SCNAVLGVLVRANRVNLAKAIYDQVVKEAL-VEPDVFTYTTMIRGFCKMGMVESARKVF- 200
+ N V+ VR V+ A+ I D +++ L +E + T T+I + + ++ A++++
Sbjct: 637 AVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEE--TIATLIAVYGRQHKLKEAKRLYL 694
Query: 201 --DEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
E + P +MI + G ++ A +F AE K C P VT + L++ + R
Sbjct: 695 AAGESKT-PGKSVIRSMIDAYVRCGWLEDAYGLFMESAE-KGCDPGAVTISILVNALTNR 752
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
G+ +EA + + E+ + + V YN LI+ + +G + A + +M G+ ++ T
Sbjct: 753 GKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTY 812
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
+M+ + + ++AI+ G+ LD K Y+ ++ Y K GK SEA+S+ EM
Sbjct: 813 NTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQK 872
Query: 379 KRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI----------- 427
K +KP S+N + ++ R E LL+ M R G + +Y +I
Sbjct: 873 KGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAE 932
Query: 428 ----CGLCKVK-------------------GRMQLVEELVSSMLQSGHNLDATMYNCLLG 464
L K K G M+ E M ++G + D+ +L
Sbjct: 933 AEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILK 992
Query: 465 GYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEE 510
GY GD E + MI S D + + V E K KE+
Sbjct: 993 GYMTCGDAEKGILFYEKMIRSS--VEDDRFVSSVVEDLYKAVGKEQ 1036
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 7/260 (2%)
Query: 114 FINAFGDRGDIRGAIHWFHKAKASG-PCALSC-NAVLGVLVRANRVNLAKAIYDQVVKEA 171
I A + G ++ A + + SG PC++ N ++ V R +++ A I+ +
Sbjct: 780 LIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSG 839
Query: 172 LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGA 228
L D YT MI + K G + A +F EM+ +P +YN M+ +C +
Sbjct: 840 LY-LDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHE 897
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
+ + E D+ T+ TLI Y++ + EA + ++E+G + +++L+
Sbjct: 898 VDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLS 957
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
L +G ++EA+R KM GI + A ++LKG+ G +E+ I ++M+ ++
Sbjct: 958 ALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVED 1017
Query: 349 DVKAYSVIVNEYCKIGKPSE 368
D SV+ + Y +GK +
Sbjct: 1018 DRFVSSVVEDLYKAVGKEQD 1037
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 169/389 (43%), Gaps = 7/389 (1%)
Query: 124 IRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTM 183
+R W + P + VL + + ++ +A+ + +++ E EPD TM
Sbjct: 171 VRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEML-EVGCEPDAVACGTM 229
Query: 184 IRGFCKMG---MVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKS 240
+ + + G + + K E R + YN M+ L KK + ++ E +
Sbjct: 230 LCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVE-EG 288
Query: 241 CRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAK 300
P+ T+T ++ Y+K+G +EAL EM+ G P VTY+++I +G+ ++A
Sbjct: 289 VPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAI 348
Query: 301 RMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEY 360
+ MR +GI + T +ML + +A+ +M + D +I+ Y
Sbjct: 349 GLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIY 408
Query: 361 CKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNF 420
K+G +A S+ E + ++ A+ +V + + +A+ +++ M +
Sbjct: 409 GKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSR 468
Query: 421 LSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVY 480
+Y +++ K++ + EE ++ ++G DA+ N +L Y E A +
Sbjct: 469 FAYIVMLQCYAKIQN-VDCAEEAFRALSKTGLP-DASSCNDMLNLYTRLNLGEKAKGFIK 526
Query: 481 DMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
++ F+ + Y T ++ C +G V E
Sbjct: 527 QIMVDQVHFDIELYKTAMRVYCKEGMVAE 555
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 149/331 (45%), Gaps = 8/331 (2%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
I+A+ G + A F ++ G P A++ + ++ L + A+ I + E
Sbjct: 711 IDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI-SRTCLEKN 769
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE--PNAI-TYNTMIHGLCKKGEMDGAM 229
+E D Y T+I+ + G ++ A ++++ M P +I TYNTMI + ++D A+
Sbjct: 770 IELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAI 829
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
+F+ A D +T +I Y K G++ EAL+ EMQ++G +P +YN +++
Sbjct: 830 EIFSN-ARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKI 888
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
S E ++ M G +++T ++++ + + EA K + + +G+ L
Sbjct: 889 CATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLS 948
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
+S +++ K G EA +M + P + + + + E+ +L +
Sbjct: 949 HSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYE 1008
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLV 440
M R + S V+ L K G+ Q V
Sbjct: 1009 KMIRSSVEDDRFVSS-VVEDLYKAVGKEQDV 1038
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 171/418 (40%), Gaps = 56/418 (13%)
Query: 134 AKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMV 193
+K P A SCN +L + R N AK Q++ + V D+ Y T +R +CK GMV
Sbjct: 495 SKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQ-VHFDIELYKTAMRVYCKEGMV 553
Query: 194 ESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSC----RPDVVTFT 249
A+ + +M E + N + L + +M + N+ + ++ + DV+
Sbjct: 554 AEAQDLIVKMGREAR-VKDNRFVQTLAE------SMHIVNKHDKHEAVLNVSQLDVMALG 606
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAK---RMMSKM 306
+++ K G + E + M + + V N +I G+V +A+ ++ ++
Sbjct: 607 LMLNLRLKEGNLNETKAILNLMFKTDLGSSAV--NRVISSFVREGDVSKAEMIADIIIRL 664
Query: 307 RLKGIKDNVATNT-------------------------------SMLKGFCMVGRSEEAI 335
L+ ++ +AT SM+ + G E+A
Sbjct: 665 GLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAY 724
Query: 336 KHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVL 395
E +G D S++VN GK EA I R + K ++ +N + + +
Sbjct: 725 GLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAM 784
Query: 396 VAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGR-MQLVE--ELVSSMLQSGH 452
+ KL+ A + + M G + +Y+ +I V GR +QL + E+ S+ +SG
Sbjct: 785 LEAGKLQCASEIYERMHTSGVPCSIQTYNTMIS----VYGRGLQLDKAIEIFSNARRSGL 840
Query: 453 NLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEE 510
LD +Y ++ Y + G AL +M K +Y VK +CA ++ E
Sbjct: 841 YLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHE 897
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 38/267 (14%)
Query: 93 FSTADSL-LRRSNKLSDFLASKFINAFGDRGDIRGAIHW---FHKAKASGPC-------- 140
FS ++L LRR ++ A ++ RG I ++W K +G
Sbjct: 42 FSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFE 101
Query: 141 ------ALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVE 194
++CNA+L V+ R+N A ++ ++ K +V ++T M+ C G E
Sbjct: 102 VMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK------NVVSWTVMLTALCDDGRSE 155
Query: 195 SARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDG 254
A ++FDEM E N +++NT++ GL + G+M+ A +VF+ DVV++ +I G
Sbjct: 156 DAVELFDEMP-ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR-----DVVSWNAMIKG 209
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
Y + ++EA +M E+ NVVT+ +++ G C G+V EA R+ +M + N
Sbjct: 210 YIENDGMEEAKLLFGDMSEK----NVVTWTSMVYGYCRYGDVREAYRLFCEMPER----N 261
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEM 341
+ + T+M+ GF EA+ EM
Sbjct: 262 IVSWTAMISGFAWNELYREALMLFLEM 288
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 131/292 (44%), Gaps = 16/292 (5%)
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRF 235
D+ + +I + K G +E A +F+ ++ + +++ +MI G + G++ A +F +
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL 426
Query: 236 AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
+ D VT+T +I G + EA + + +M G +P TY+ L+ + N
Sbjct: 427 HDK-----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSN 481
Query: 296 VDEAKRM---MSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKA 352
+D+ K + ++K D + N S++ + G E+A + +MV + D +
Sbjct: 482 LDQGKHIHCVIAKTTACYDPDLILQN-SLVSMYAKCGAIEDAYEIFAKMVQK----DTVS 536
Query: 353 YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
++ ++ G +A+++ +EM+ KP+ +F V + + L K M
Sbjct: 537 WNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMK 596
Query: 413 RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLG 464
+ + I + L G+++ EE +S++ D T+Y LLG
Sbjct: 597 ETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISAL---PFTPDHTVYGALLG 645
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 21/188 (11%)
Query: 245 VVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMS 304
VV +T+L+ Y+K G + EA + M E+ N+VT NA++ G ++EA +
Sbjct: 77 VVYWTSLLSKYAKTGYLDEARVLFEVMPER----NIVTCNAMLTGYVKCRRMNEAWTLFR 132
Query: 305 KMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIG 364
+M NV + T ML C GRSE+A++ EM R +V +++ +V + G
Sbjct: 133 EM-----PKNVVSWTVMLTALCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNG 183
Query: 365 KPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYS 424
+A + M ++ V S+NA+ + + +EEA LL +M N ++++
Sbjct: 184 DMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMSE----KNVVTWT 235
Query: 425 IVICGLCK 432
++ G C+
Sbjct: 236 SMVYGYCR 243
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 120/301 (39%), Gaps = 54/301 (17%)
Query: 75 HPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKA 134
H ++ + S L ++A SLL S L + IN + GD+ A F +
Sbjct: 337 HDGRLAKSLVHMYASSGLIASAQSLLNESFDLQS--CNIIINRYLKNGDLERAETLFERV 394
Query: 135 KASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGM-V 193
K+ +S +++ + A V+ A ++ + L + D T+T MI G + +
Sbjct: 395 KSLHD-KVSWTSMIDGYLEAGDVSRAFGLFQK-----LHDKDGVTWTVMISGLVQNELFA 448
Query: 194 ESARKVFDEMRC---------------------------------------EPNAITYNT 214
E+A + D +RC +P+ I N+
Sbjct: 449 EAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNS 508
Query: 215 MIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQ 274
++ K G ++ A +F +K + D V++ ++I G S G +ALN KEM +
Sbjct: 509 LVSMYAKCGAIEDAYEIF-----AKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDS 563
Query: 275 GCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR-LKGIKDNVATNTSMLKGFCMVGRSEE 333
G +PN VT+ ++ SG + + M+ I+ + SM+ G+ +E
Sbjct: 564 GKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKE 623
Query: 334 A 334
A
Sbjct: 624 A 624
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 149/345 (43%), Gaps = 40/345 (11%)
Query: 174 EPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYN--TMIH------GLC----K 221
E ++ ++T MI GF + A +F EM+ + +A++ N T+I GL +
Sbjct: 259 ERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRR 318
Query: 222 KGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKE-MQEQGCQPNV 280
GE A + N + ++ D +L+ Y+ G + A + + E Q C
Sbjct: 319 LGEQLHAQVISNGW---ETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSC---- 371
Query: 281 VTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKE 340
N +I +G+++ A+ + R+K + D V+ TSM+ G+ G A ++
Sbjct: 372 ---NIIINRYLKNGDLERAETLFE--RVKSLHDKVSW-TSMIDGYLEAGDVSRAFGLFQK 425
Query: 341 MVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERK 400
+ D D ++V+++ + +EA S+L +MV +KP S+++ + A
Sbjct: 426 L----HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSN 481
Query: 401 LEEAVLLLKNMPRMGC--SPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATM 458
L++ + + + P+ + + ++ K G ++ E+ + M+Q D
Sbjct: 482 LDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKC-GAIEDAYEIFAKMVQK----DTVS 536
Query: 459 YNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCA 503
+N ++ G G + AL +M+D K TF+ L A
Sbjct: 537 WNSMIMGLSHHGLADKALNLFKEMLDSG---KKPNSVTFLGVLSA 578
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 168/377 (44%), Gaps = 62/377 (16%)
Query: 168 VKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDG 227
V E + E +V ++T M++G+ + GMV A +F M E N +++ M GL G +D
Sbjct: 101 VFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM-PERNEVSWTVMFGGLIDDGRIDK 159
Query: 228 AMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
A ++++ DVV T +I G + G V EA EM+E+ NVVT+ +I
Sbjct: 160 ARKLYDMMPVK-----DVVASTNMIGGLCREGRVDEARLIFDEMRER----NVVTWTTMI 210
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMD 347
G + VD A+++ M K + TSML G+ + GR E+A + + M +
Sbjct: 211 TGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK--- 263
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVA--ERK-LE-E 403
V A + ++ + ++G+ S+A + M + NA +R ++ ERK E E
Sbjct: 264 -PVIACNAMIVGFGEVGEISKARRVFDLMEDRD--------NATWRGMIKAYERKGFELE 314
Query: 404 AVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEEL--------------VSSMLQ 449
A+ L M + G P+F S I I +C +Q ++ V+S+L
Sbjct: 315 ALDLFAQMQKQGVRPSFPSL-ISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLM 373
Query: 450 SGH-----------------NLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKD 492
+ + + D M+N ++ GY G E ALK ++M + NK
Sbjct: 374 TMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKV 433
Query: 493 TYCTFVKELCAKGKVKE 509
T + GK++E
Sbjct: 434 TLIAILTACSYAGKLEE 450
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 149/342 (43%), Gaps = 61/342 (17%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQV-VKEALVEPDVFTYTTMIRGFCKMGMVESARKVF 200
+S + G L+ R++ A+ +YD + VK DV T MI G C+ G V+ AR +F
Sbjct: 142 VSWTVMFGGLIDDGRIDKARKLYDMMPVK------DVVASTNMIGGLCREGRVDEARLIF 195
Query: 201 DEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGE 260
DEMR E N +T+ TMI G + +D A ++F E V++T+++ GY+ G
Sbjct: 196 DEMR-ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTE-----VSWTSMLLGYTLSGR 249
Query: 261 VQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTS 320
+++A +E E V+ NA+I G G + +A+R+ M +DN AT
Sbjct: 250 IEDA----EEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLME---DRDN-ATWRG 301
Query: 321 MLKGFCMVGRSEEAIKHMKEMVSRGM---------------------------------- 346
M+K + G EA+ +M +G+
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 347 -DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAV 405
D DV SV++ Y K G+ +A + +K + +N++ + EEA+
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK----DIIMWNSIISGYASHGLGEEAL 417
Query: 406 LLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM 447
+ MP G PN ++ I I C G+++ E+ SM
Sbjct: 418 KIFHEMPSSGTMPNKVTL-IAILTACSYAGKLEEGLEIFESM 458
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 48/206 (23%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
++CNA++ ++ A+ ++D + + D T+ MI+ + + G A +F
Sbjct: 266 IACNAMIVGFGEVGEISKARRVFD-----LMEDRDNATWRGMIKAYERKGFELEALDLFA 320
Query: 202 EMRCE------PNAIT------------YNTMIHG--------------------LCKKG 223
+M+ + P+ I+ Y +H K G
Sbjct: 321 QMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCG 380
Query: 224 EMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTY 283
E+ A VF+RF+ D++ + ++I GY+ G +EAL EM G PN VT
Sbjct: 381 ELVKAKLVFDRFSSK-----DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTL 435
Query: 284 NALIEGLCLSGNVDEAKRMMSKMRLK 309
A++ +G ++E + M K
Sbjct: 436 IAILTACSYAGKLEEGLEIFESMESK 461
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 160 AKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMI 216
AK ++D+ D+ + ++I G+ G+ E A K+F EM PN +T ++
Sbjct: 385 AKLVFDR-----FSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAIL 439
Query: 217 HGLCKKGEMDGAMRVFNRFAESKSC-RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQG 275
G+++ + +F ESK C P V ++ +D + G+V +A+ ++ M
Sbjct: 440 TACSYAGKLEEGLEIFESM-ESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT--- 495
Query: 276 CQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVAT 317
+P+ + AL+ G C + + + + +K + DN T
Sbjct: 496 IKPDATVWGALL-GACKTHSRLDLAEVAAKKLFENEPDNAGT 536
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 107/236 (45%), Gaps = 20/236 (8%)
Query: 168 VKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM-----RCEPNAITYNTMIHGLCKK 222
+KE +PDV+ Y T+I C++G + AR + D+M R P+ TY +I C+
Sbjct: 191 MKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRY 250
Query: 223 GEMDGAMRVFNR--------FAES--KSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQ 272
G G + R F E + PDVVT+ LIDG K + AL ++M+
Sbjct: 251 GMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMK 310
Query: 273 EQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIK-DNVATNTSMLKGFCMVGRS 331
+GC PN VTYN+ I ++ ++ A MM M+ G +T T ++ R+
Sbjct: 311 TKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRA 370
Query: 332 EEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSS 387
EA + EMV G+ Y ++ + G S L E + KRM+ +
Sbjct: 371 AEARDLVVEMVEAGLVPREYTYKLVCDALSSEG----LASTLDEELHKRMREGIQQ 422
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 123/260 (47%), Gaps = 17/260 (6%)
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVT--FTTLIDGYSKRGEVQEAL 265
N IT M L K + G + + ++ + V T T L+ + G V+EAL
Sbjct: 126 NEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEAL 185
Query: 266 NCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIK--DNVATNTSMLK 323
M+E C+P+V YN +I LC GN +A+ ++ +M+L G + + T T ++
Sbjct: 186 ATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILIS 245
Query: 324 GFCMVG-----------RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSI 372
+C G R EA + +EM+ RG DV Y+ +++ CK + A+ +
Sbjct: 246 SYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALEL 305
Query: 373 LREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCS-PNFLSYSIVICGLC 431
+M K P+ ++N+ R ++E A+ +++ M ++G P +Y+ +I L
Sbjct: 306 FEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALV 365
Query: 432 KVKGRMQLVEELVSSMLQSG 451
+ + R +LV M+++G
Sbjct: 366 ETR-RAAEARDLVVEMVEAG 384
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 12/148 (8%)
Query: 364 GKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNM--PRMGCSPNFL 421
G EA++ M KP V ++N + L ++A LL M P P+
Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTY 238
Query: 422 SYSIVICGLCK----------VKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGD 471
+Y+I+I C+ ++ RM + ML G D YNCL+ G C+
Sbjct: 239 TYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNR 298
Query: 472 EEMALKTVYDMIDKSFLFNKDTYCTFVK 499
AL+ DM K + N+ TY +F++
Sbjct: 299 IGRALELFEDMKTKGCVPNQVTYNSFIR 326
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 154/358 (43%), Gaps = 56/358 (15%)
Query: 159 LAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHG 218
L ++ K L V T +I + K G + AR VFD M + N++T+NTMI G
Sbjct: 91 LGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYME-DKNSVTWNTMIDG 149
Query: 219 LCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQP 278
+ G++D A ++F++ E D++++T +I+G+ K+G +EAL +EMQ G +P
Sbjct: 150 YMRSGQVDNAAKMFDKMPER-----DLISWTAMINGFVKKGYQEEALLWFREMQISGVKP 204
Query: 279 -----------------------------------NVVTYNALIEGLCLSGNVDEAKRMM 303
NV N+LI+ C G V+ A+++
Sbjct: 205 DYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 264
Query: 304 SKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKI 363
M K V + S++ GF G + E++ + ++M +G D ++ + +
Sbjct: 265 YNME----KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHV 320
Query: 364 GKPSEAVSILREMVAK-RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLS 422
G E + + M R+ P + + + + +LE+A+ L+++MP PN
Sbjct: 321 GLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMP---MKPN--- 374
Query: 423 YSIVICGL---CKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALK 477
+VI L C G ++ E + L + + Y L Y DG E A K
Sbjct: 375 -EVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASK 431
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 154/380 (40%), Gaps = 71/380 (18%)
Query: 150 VLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CE 206
++ N N ++Q E V ++T+ I + G + A K F +M E
Sbjct: 14 LITHKNHANPKIQRHNQSTSETTV-----SWTSRINLLTRNGRLAEAAKEFSDMTLAGVE 68
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSC-----RPDVVTFTTLIDGYSKRGEV 261
PN IT+ ++ G C G+ +C R V+ T +I YSKRG
Sbjct: 69 PNHITFIALLSG-C--GDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRF 125
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
++A M+++ N VT+N +I+G SG VD A +M KM + ++ + T+M
Sbjct: 126 KKARLVFDYMEDK----NSVTWNTMIDGYMRSGQVDNAAKMFDKMPER----DLISWTAM 177
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLD-------------------------------- 349
+ GF G EEA+ +EM G+ D
Sbjct: 178 INGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDF 237
Query: 350 ---VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
V+ + +++ YC+ G V R++ K +V S+N+V A E+++
Sbjct: 238 KNNVRVSNSLIDLYCRCG----CVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLV 293
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVS--SMLQSGHNLDATM--YNCL 462
+ M G P+ ++++ + V LVEE + +++ + + + Y CL
Sbjct: 294 YFRKMQEKGFKPDAVTFTGALTACSHVG----LVEEGLRYFQIMKCDYRISPRIEHYGCL 349
Query: 463 LGGYCEDGDEEMALKTVYDM 482
+ Y G E ALK V M
Sbjct: 350 VDLYSRAGRLEDALKLVQSM 369
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 25/289 (8%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
+ IN F +G A+ WF + + SG P ++ A L ++ ++ V+
Sbjct: 175 TAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLS 234
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAM 229
+ + +V ++I +C+ G VE AR+VF M + +++N++I G G ++
Sbjct: 235 QDF-KNNVRVSNSLIDLYCRCGCVEFARQVFYNME-KRTVVSWNSVIVGFAANGNAHESL 292
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQ-EQGCQPNVVTYNALIE 288
F + E K +PD VTFT + S G V+E L + M+ + P + Y L++
Sbjct: 293 VYFRKMQE-KGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVD 351
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGR----SEEAIKHMKEMVSR 344
+G +++A +++ M + K N S+L G +E +KH+
Sbjct: 352 LYSRAGRLEDALKLVQSMPM---KPNEVVIGSLLAACSNHGNNIVLAERLMKHLT----- 403
Query: 345 GMDLDVKAYS---VIVNEYCKIGKPSEAVSILREM--VAKRMKPSVSSF 388
DL+VK++S ++ N Y GK A + R+M + + +P SS
Sbjct: 404 --DLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSI 450
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 146/358 (40%), Gaps = 62/358 (17%)
Query: 141 ALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVF 200
+++ N ++ +R+ +V+ A ++D+ + E D+ ++T MI GF K G E A F
Sbjct: 140 SVTWNTMIDGYMRSGQVDNAAKMFDK-----MPERDLISWTAMINGFVKKGYQEEALLWF 194
Query: 201 DEMR---CEPN---------------AITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCR 242
EM+ +P+ A+++ +H + +RV N + CR
Sbjct: 195 REMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLID-LYCR 253
Query: 243 ----------------PDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
VV++ ++I G++ G E+L ++MQE+G +P+ VT+
Sbjct: 254 CGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGA 313
Query: 287 IEGLCLSGNVDEAKRMMSKMRLK-GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG 345
+ G V+E R M+ I + ++ + GR E+A+K ++ M
Sbjct: 314 LTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM---- 369
Query: 346 MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMK----PSVSSFNAVFRVLVAERKL 401
+K V++ +L E + K + S S++ + + A+ K
Sbjct: 370 ---PMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKW 426
Query: 402 EEAVLLLKNMPRMGC--SPNFLSYSIVICGLCKVKGRMQLVE--------ELVSSMLQ 449
E A + + M +G P F S I C + G VE EL+SS L+
Sbjct: 427 EGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLR 484
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 109/211 (51%), Gaps = 14/211 (6%)
Query: 198 KVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSK 257
KV E + + YN +IHGLCK G+ D A +F S +PDV T+ +I +S
Sbjct: 3 KVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLIS-GLQPDVQTYNMMIR-FSS 60
Query: 258 RGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVAT 317
G ++ EM +G P+ +TYN++I GLC + +A++ + + +T
Sbjct: 61 LGRAEKLY---AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCST 108
Query: 318 NTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMV 377
+++ G+C R ++ + EM RG+ +V Y+ +++ + ++G + A+ I +EMV
Sbjct: 109 FNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168
Query: 378 AKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
+ + S +F + L + ++L +AV +L
Sbjct: 169 SNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 96/185 (51%), Gaps = 18/185 (9%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM- 203
N ++ L +A + + A I+ ++ L +PDV TY MIR F +G E K++ EM
Sbjct: 18 NIIIHGLCKAGKFDEAGNIFTNLLISGL-QPDVQTYNMMIR-FSSLGRAE---KLYAEMI 72
Query: 204 --RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
P+ ITYN+MIHGLCK+ ++ A +V SKSC TF TLI+GY K V
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKV------SKSCS----TFNTLINGYCKATRV 122
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
++ +N EM +G NV+TY LI G G+ + A + +M G+ + T +
Sbjct: 123 KDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDI 182
Query: 322 LKGFC 326
L C
Sbjct: 183 LPQLC 187
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 83/191 (43%), Gaps = 13/191 (6%)
Query: 244 DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMM 303
D + +I G K G+ EA N + G QP+V TYN +I ++ A+++
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAEKLY 68
Query: 304 SKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKI 363
++M +G+ + T SM+ G C K K +R + ++ ++N YCK
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLC---------KQNKLAQARKVSKSCSTFNTLINGYCKA 119
Query: 364 GKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSY 423
+ + +++ EM + + +V ++ + A+ + + M G + +++
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 424 SIVICGLCKVK 434
++ LC K
Sbjct: 180 RDILPQLCSRK 190
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 302 MMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYC 361
M MR + + A ++ G C G+ +EA ++ G+ DV+ Y++++ +
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-RFS 59
Query: 362 KIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFL 421
+G+ A + EM+ + + P ++N++ L + KL +A + K+ CS
Sbjct: 60 SLGR---AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKS-----CS---- 107
Query: 422 SYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYD 481
+++ +I G CK R++ L M + G + Y L+ G+ + GD AL +
Sbjct: 108 TFNTLINGYCKAT-RVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQE 166
Query: 482 MIDKSFLFNKDTYCTFVKELCAKGKVKE 509
M+ + T+ + +LC++ ++++
Sbjct: 167 MVSNGVYSSSITFRDILPQLCSRKELRK 194
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 170/369 (46%), Gaps = 42/369 (11%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
+S N ++ ++ +++ A+ ++D E+ V+ DVFT+T M+ G+ + MVE AR++FD
Sbjct: 251 VSWNTIITGYAQSGKIDEARQLFD----ESPVQ-DVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 202 EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFN---------------------RFAESKS 240
+M E N +++N M+ G + M+ A +F+ + +E+K+
Sbjct: 306 KM-PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKN 364
Query: 241 C-----RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
+ D V++ +I GYS+ G EAL +M+ +G + N ++++ +
Sbjct: 365 LFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVA 424
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSV 355
++ K++ ++ G + ++L +C G EEA KEM + D+ +++
Sbjct: 425 LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNT 480
Query: 356 IVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPR-M 414
++ Y + G A+ M + +KP ++ AV +++ M +
Sbjct: 481 MIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDY 540
Query: 415 GCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEM 474
G PN Y+ ++ + GR L+E+ + M DA ++ LLG G+ E+
Sbjct: 541 GVMPNSQHYACMV----DLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTEL 596
Query: 475 ALKTVYDMI 483
A +T D I
Sbjct: 597 A-ETAADKI 604
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 165/374 (44%), Gaps = 51/374 (13%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
+S N ++ VR + A+ ++ E + E DV ++ TM+ G+ + G V+ AR VFD
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELF-----EIMPERDVCSWNTMLSGYAQNGCVDDARSVFD 181
Query: 202 EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFN---------------------------R 234
M E N +++N ++ + +M+ A +F +
Sbjct: 182 RM-PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQ 240
Query: 235 FAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSG 294
F +S + R DVV++ T+I GY++ G++ EA E Q +V T+ A++ G +
Sbjct: 241 FFDSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDESPVQ----DVFTWTAMVSGYIQNR 295
Query: 295 NVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYS 354
V+EA+ + KM + N + +ML G+ R E A + M R +V ++
Sbjct: 296 MVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCR----NVSTWN 347
Query: 355 VIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRM 414
++ Y + GK SEA ++ +M K S+ A+ EA+ L M R
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMP----KRDPVSWAAMIAGYSQSGHSFEALRLFVQMERE 403
Query: 415 GCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEM 474
G N S+S + V ++L ++L +++ G+ + N LL YC+ G E
Sbjct: 404 GGRLNRSSFSSALSTCADVVA-LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462
Query: 475 ALKTVYDMIDKSFL 488
A +M K +
Sbjct: 463 ANDLFKEMAGKDIV 476
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 161/343 (46%), Gaps = 41/343 (11%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR 204
N + +R R N A ++ ++ + + V +Y MI G+ + G E ARK+FDEM
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSV-----SYNGMISGYLRNGEFELARKLFDEM- 121
Query: 205 CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEA 264
E + +++N MI G + + A +F E DV ++ T++ GY++ G V +A
Sbjct: 122 PERDLVSWNVMIKGYVRNRNLGKARELFEIMPER-----DVCSWNTMLSGYAQNGCVDDA 176
Query: 265 LNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVA--TNTSML 322
+ M E+ N V++NAL+ + ++EA M+ K R +N A + +L
Sbjct: 177 RSVFDRMPEK----NDVSWNALLSAYVQNSKMEEAC-MLFKSR-----ENWALVSWNCLL 226
Query: 323 KGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMK 382
GF + EA + M R DV +++ I+ Y + GK EA + E +
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDESPVQ--- 279
Query: 383 PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEE 442
V ++ A+ + R +EEA L MP N +S++ ++ G + + RM++ +E
Sbjct: 280 -DVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGE-RMEMAKE 333
Query: 443 LVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDK 485
L M + + +N ++ GY + G A K ++D + K
Sbjct: 334 LFDVMPCR----NVSTWNTMITGYAQCGKISEA-KNLFDKMPK 371
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 134/283 (47%), Gaps = 6/283 (2%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKM---GMVESARKVFD 201
N ++ ++N + + ++ ++ + L +P TY ++ + + +VE+ + +
Sbjct: 383 NTLMDAYNKSNHIEEVEGLFTEMRDKGL-KPSAATYNILMDAYARRMQPDIVETLLREME 441
Query: 202 EMRCEPNAITYNTMIHGLCKKGEM-DGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGE 260
++ EPN +Y +I + +M D A F R + +P ++T LI YS G
Sbjct: 442 DLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKV-GLKPSSHSYTALIHAYSVSGW 500
Query: 261 VQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTS 320
++A +EM ++G +P+V TY ++++ SG+ + + M + IK T +
Sbjct: 501 HEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNT 560
Query: 321 MLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKR 380
+L GF G EA + E G+ V Y++++N Y + G+ ++ +L+EM A
Sbjct: 561 LLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALN 620
Query: 381 MKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSY 423
+KP +++ + V R + A K M + G P+ SY
Sbjct: 621 LKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSY 663
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/449 (20%), Positives = 188/449 (41%), Gaps = 45/449 (10%)
Query: 57 LFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFIN 116
L+F+ W S +P+ + PR+C T LL R +++D++ ++
Sbjct: 222 LYFYEWMSLQEPS---LASPRACSVLFT--------------LLGR-ERMADYILL-LLS 262
Query: 117 AFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPD 176
D+ + R + NA + L + R + A +Y+ + K V PD
Sbjct: 263 NLPDKEEFRDVRLY--------------NAAISGLSASQRYDDAWEVYEAMDK-INVYPD 307
Query: 177 VFTYTTMIRGFCKMGMVESARKVFD------EMRCEPNAITYNTMIHGLCKKGEMDGAMR 230
T +I K G SA++V++ E + + + ++ C +G + A+
Sbjct: 308 NVTCAILITTLRKAG--RSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEAL- 364
Query: 231 VFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGL 290
V E K R + + + TL+D Y+K ++E EM+++G +P+ TYN L++
Sbjct: 365 VIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAY 424
Query: 291 CLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGR-SEEAIKHMKEMVSRGMDLD 349
D + ++ +M G++ NV + T ++ + + S+ A M G+
Sbjct: 425 ARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPS 484
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
+Y+ +++ Y G +A + EM + +KPSV ++ +V + + + K
Sbjct: 485 SHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWK 544
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
M R ++Y+ ++ G K +G ++VS + G YN L+ Y
Sbjct: 545 LMLREKIKGTRITYNTLLDGFAK-QGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARG 603
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
G + + + +M + + TY T +
Sbjct: 604 GQDAKLPQLLKEMAALNLKPDSITYSTMI 632
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 7/285 (2%)
Query: 113 KFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKE 170
K + G G A F + G P A+L R+N ++ A +I D++
Sbjct: 129 KLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSF 188
Query: 171 ALVEPDVFTYTTMIRG---FCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDG 227
+PDVFTY+T+++ + +V+S K DE PN +T N ++ G + G D
Sbjct: 189 PQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQ 248
Query: 228 AMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
+V + S +C+PDV T ++ + G++ + ++ + G +P T+N LI
Sbjct: 249 MEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILI 308
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMD 347
D+ +M MR +T ++++ F VG ++ +M S GM
Sbjct: 309 GSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMK 368
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSF-NAV 391
D K + ++N Y G + +S + ++ AK P ++F NAV
Sbjct: 369 ADTKTFCCLINGYANAGLFHKVISSV-QLAAKFEIPENTAFYNAV 412
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 152/356 (42%), Gaps = 13/356 (3%)
Query: 132 HKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMG 191
++KA+G + L L+ + A ++D + ++ +P TY ++ K G
Sbjct: 80 RRSKANG-WVNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSG 138
Query: 192 MVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTF 248
A+K+FDEM EP Y ++ + +D A + ++ C+PDV T+
Sbjct: 139 QPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTY 198
Query: 249 TTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRL 308
+TL+ + + KEM E+ PN VT N ++ G G D+ ++++S M +
Sbjct: 199 STLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLV 258
Query: 309 K-GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPS 367
K +V T +L F +G+ + ++ + G++ + + +++++ Y K
Sbjct: 259 STACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYD 318
Query: 368 EAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI 427
+ S++ M + S++N + + L M G + ++ +I
Sbjct: 319 KMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLI 378
Query: 428 CGLCKVKGRMQLVEELVSSM-LQSGHNL--DATMYNCLLGGYCEDGDEEMALKTVY 480
G L +++SS+ L + + + YN ++ C D+ + ++ VY
Sbjct: 379 NGYANAG----LFHKVISSVQLAAKFEIPENTAFYNAVISA-CAKADDLIEMERVY 429
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 128/294 (43%), Gaps = 11/294 (3%)
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKE 270
T + L K + A+ VF+ E +P T+ L+ K G+ A E
Sbjct: 90 TVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDE 149
Query: 271 MQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR-LKGIKDNVATNTSMLKGFCMVG 329
M E+G +P V Y AL+ S +D+A ++ KM+ + +V T +++LK
Sbjct: 150 MLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDAS 209
Query: 330 RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREM-VAKRMKPSVSSF 388
+ + KEM R + + +++++ Y ++G+ + +L +M V+ KP V +
Sbjct: 210 QFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTM 269
Query: 389 NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
N + V K++ + G P +++I+I G+ ++ +++ SS++
Sbjct: 270 NIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSY----GKKRMYDKM-SSVM 324
Query: 449 QSGHNLD----ATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFV 498
+ L+ + YN ++ + + GD + T M + + T+C +
Sbjct: 325 EYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLI 378
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR 204
NA++ V++ + A+ ++D++ + V T+TTMI G+C + +++ARK+FD M
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKT-----VITWTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 205 CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTF---------------- 248
E N +++NTMI G C+ + +R+F + S PD VT
Sbjct: 235 -ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLG 293
Query: 249 -------------------TTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
T ++D YSK GE+++A EM E+ V ++NA+I G
Sbjct: 294 EWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK----QVASWNAMIHG 349
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
L+GN A + M ++ D + T +++ G EE K M G++
Sbjct: 350 YALNGNARAALDLFVTMMIEEKPDEI-TMLAVITACNHGGLVEEGRKWFHVMREMGLNAK 408
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSF----NAVFRVLVAERKLEEAV 405
++ Y +V+ + G EA ++ M + +SSF + AER L++AV
Sbjct: 409 IEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAV 468
Query: 406 LL 407
L
Sbjct: 469 EL 470
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 149/373 (39%), Gaps = 90/373 (24%)
Query: 162 AIYDQVVKEALVEPDVFTYTTMIR---------------------GFC------------ 188
A+Y + KE PD FT+TT+ + GFC
Sbjct: 63 ALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDM 122
Query: 189 --KMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVV 246
K G + AR FDEM + +++ +I G + GE+D A ++F++ K DVV
Sbjct: 123 YAKFGKMGCARNAFDEMP-HRSEVSWTALISGYIRCGELDLASKLFDQMPHVK----DVV 177
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
+ ++DG+ K G++ A EM + V+T+ +I G C ++D A+++ M
Sbjct: 178 IYNAMMDGFVKSGDMTSARRLFDEMTHK----TVITWTTMIHGYCNIKDIDAARKLFDAM 233
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVS----------------------- 343
+ N+ + +M+ G+C + +E I+ +EM +
Sbjct: 234 PER----NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGA 289
Query: 344 -------------RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNA 390
+ +D VK + I++ Y K G+ +A I EM K+ V+S+NA
Sbjct: 290 LSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQ----VASWNA 345
Query: 391 VFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS 450
+ A+ L M + P+ ++ VI C G ++ + M +
Sbjct: 346 MIHGYALNGNARAALDLFVTM-MIEEKPDEITMLAVITA-CNHGGLVEEGRKWFHVMREM 403
Query: 451 GHNLDATMYNCLL 463
G N Y C++
Sbjct: 404 GLNAKIEHYGCMV 416
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 163/372 (43%), Gaps = 15/372 (4%)
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESA----RKVFDEMRCE 206
L+RA+ ++ A + Q V + P VFT +I + + + F +
Sbjct: 155 LIRASDLDAASKLARQSVF-SNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIV 213
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALN 266
PN ++YN +I+ C +G +D A+ V+ + P VT+ L G + G + +A +
Sbjct: 214 PNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAAS 273
Query: 267 CMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFC 326
++EM +G + YN LI G G+ D+A +++ K + N + ++ +
Sbjct: 274 LLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWF 333
Query: 327 MVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVS 386
G +EA++ + ++ + + +V++ + K GK EA ++ EM+ P++
Sbjct: 334 EKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNIL 393
Query: 387 SFNA-VFRVLVAE----RKLEEAVLLLKNM-PRMGCSP---NFLSYSIVICGLCKVKGRM 437
S N+ ++V E + EA+ K + ++ P ++L Y ++ C+ +G +
Sbjct: 394 SVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCE-QGML 452
Query: 438 QLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTF 497
E + + DA + ++ Y + + A+K + M+D + D
Sbjct: 453 TEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARV 512
Query: 498 VKELCAKGKVKE 509
EL GK+ E
Sbjct: 513 FGELIKNGKLTE 524
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 173/376 (46%), Gaps = 23/376 (6%)
Query: 99 LLRRSNKLSDFLA-SKFINAFGDRGDIRGAIHWFHKAKASGPCALSC---NAVLGVLVRA 154
++SN + + ++ ++ INA D G++ A+ + A+ P A S + LV+A
Sbjct: 206 FFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQA 265
Query: 155 NRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAIT 211
R+ A ++ +++ + D Y +IRG+ +G + A + FDE++ + + I
Sbjct: 266 GRIGDAASLLREMLSKGQAA-DSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIV 324
Query: 212 YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEM 271
T + +KG AM + + K R T L++ + K G+ EA EM
Sbjct: 325 NATFMEYWFEKGNDKEAMESYRSLLDKK-FRMHPPTGNVLLEVFLKFGKKDEAWALFNEM 383
Query: 272 QEQGCQPNVVTYNALIEGLCLS-----GNVDEA----KRMMSKMRLKGIKDNVATNTSML 322
+ PN+++ N+ G+ ++ G EA K++ SK+ K + +++
Sbjct: 384 LDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIV 443
Query: 323 KGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMK 382
FC G EA + E VSR + D ++ +++ Y K + +AV +L MV ++
Sbjct: 444 TRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLR 503
Query: 383 PSVSSFNA-VFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVE 441
V+ F A VF L+ KL E+ +L M P+ Y +V+ GLC + +
Sbjct: 504 -VVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDA-LDQAK 561
Query: 442 ELVSSMLQSGHNLDAT 457
++V M++ HN+ T
Sbjct: 562 DIVGEMIR--HNVGVT 575
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 171/426 (40%), Gaps = 57/426 (13%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P +CNA++ + RA R + + +++ K++ + P+V +Y +I C G V+ A +
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALE 237
Query: 199 VFDEMRCE----PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDG 254
V+ + P+++TY + GL + G + A + R SK D + LI G
Sbjct: 238 VYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLL-REMLSKGQAADSTVYNNLIRG 296
Query: 255 YSKRGEVQEALNCMKEMQ-------------------EQGCQPNVV-------------- 281
Y G+ +A+ E++ E+G +
Sbjct: 297 YLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMH 356
Query: 282 --TYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM-----VGRSEEA 334
T N L+E G DEA + ++M N+ + S G + +G EA
Sbjct: 357 PPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEA 416
Query: 335 IKHMKEM----VSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNA 390
I K++ S+ +D Y IV +C+ G +EA E V++ + S A
Sbjct: 417 INTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRA 476
Query: 391 VFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS 450
+ + ++++AV +L M + + + G G++ E+++ M +
Sbjct: 477 MIDAYLKAERIDDAVKMLDRMVDVNLR-VVADFGARVFGELIKNGKLTESAEVLTKMGER 535
Query: 451 GHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCT---FVKELCAKGKV 507
D ++Y+ ++ G C DGD AL D++ + N F+ E+ K
Sbjct: 536 EPKPDPSIYDVVVRGLC-DGD---ALDQAKDIVGEMIRHNVGVTTVLREFIIEVFEKAGR 591
Query: 508 KEEYLK 513
+EE K
Sbjct: 592 REEIEK 597
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 129/322 (40%), Gaps = 30/322 (9%)
Query: 79 CYAAITDVLLSHSLFSTADSLLR----RSNKLSDFLASKFINAFGDRGDIRGAIHWFHKA 134
Y +T L+ A SLLR + + + I + D GD A+ +F +
Sbjct: 254 TYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDEL 313
Query: 135 KASGPCALSCNAVLGVLV-----RANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCK 189
K+ C + V + + N ++ + K+ + P T ++ F K
Sbjct: 314 KSK--CTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPP--TGNVLLEVFLK 369
Query: 190 MGMVESARKVFDEM---RCEPNAITYNT-----MIHGLCKKGEMDGAMRVFNRFAESKSC 241
G + A +F+EM PN ++ N+ M++ K GE A+ F + +
Sbjct: 370 FGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTS 429
Query: 242 RP---DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDE 298
+P D + + ++ + ++G + EA E + + ++ A+I+ + +D+
Sbjct: 430 KPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDD 489
Query: 299 AKRMMSKM---RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSV 355
A +M+ +M L+ + D A + G+ E+ + + +M R D Y V
Sbjct: 490 AVKMLDRMVDVNLRVVADFGA---RVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDV 546
Query: 356 IVNEYCKIGKPSEAVSILREMV 377
+V C +A I+ EM+
Sbjct: 547 VVRGLCDGDALDQAKDIVGEMI 568
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 134/270 (49%), Gaps = 27/270 (10%)
Query: 143 SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDE 202
+ N + L R +++ A+ ++D ++ + ++ +M+ G+ M ARK+FDE
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKS-----ISSWNSMVAGYFANLMPRDARKLFDE 73
Query: 203 MRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQ 262
M + N I++N ++ G K GE+D A +VF+ E +VV++T L+ GY G+V
Sbjct: 74 MP-DRNIISWNGLVSGYMKNGEIDEARKVFDLMPER-----NVVSWTALVKGYVHNGKVD 127
Query: 263 EALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSML 322
A + +M E+ N V++ ++ G G +D+A ++ + KDN+A TSM+
Sbjct: 128 VAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYEMI---PDKDNIA-RTSMI 179
Query: 323 KGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMK 382
G C GR +EA + EM R V ++ +V Y + + +A I M K
Sbjct: 180 HGLCKEGRVDEAREIFDEMSERS----VITWTTMVTGYGQNNRVDDARKIFDVMPEK--- 232
Query: 383 PSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
+ S+ ++ V ++E+A L + MP
Sbjct: 233 -TEVSWTSMLMGYVQNGRIEDAEELFEVMP 261
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 174/377 (46%), Gaps = 38/377 (10%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
+S A++ V +V++A++++ + + E + ++T M+ GF + G ++ A K++
Sbjct: 111 VSWTALVKGYVHNGKVDVAESLFWK-----MPEKNKVSWTVMLIGFLQDGRIDDACKLY- 164
Query: 202 EMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
EM + + I +MIHGLCK+G +D A +F+ +E V+T+TT++ GY + V
Sbjct: 165 EMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERS-----VITWTTMVTGYGQNNRV 219
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
+A M E+ V++ +++ G +G +++A+ + M +K + +A N +M
Sbjct: 220 DDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV---IACN-AM 271
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
+ G G +A + M R + ++ ++ + + G EA+ + M + +
Sbjct: 272 ISGLGQKGEIAKARRVFDSMKER----NDASWQTVIKIHERNGFELEALDLFILMQKQGV 327
Query: 382 KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVE 441
+P+ + ++ V + L + + R + S+++ K
Sbjct: 328 RPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCG------- 380
Query: 442 ELVSSML--QSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDM-IDKSFLFNKDTYCTFV 498
ELV S L + D M+N ++ GY G E ALK +M + S K TFV
Sbjct: 381 ELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGS---TKPNEVTFV 437
Query: 499 KEL--CAKGKVKEEYLK 513
L C+ + EE LK
Sbjct: 438 ATLSACSYAGMVEEGLK 454
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 148/313 (47%), Gaps = 21/313 (6%)
Query: 155 NRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNT 214
NRV+ A+ I+D + E ++T+M+ G+ + G +E A ++F+ M +P I N
Sbjct: 217 NRVDDARKIFD-----VMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKP-VIACNA 270
Query: 215 MIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQ 274
MI GL +KGE+ A RVF+ E R D ++ T+I + + G EAL+ MQ+Q
Sbjct: 271 MISGLGQKGEIAKARRVFDSMKE----RND-ASWQTVIKIHERNGFELEALDLFILMQKQ 325
Query: 275 GCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEA 334
G +P T +++ ++ K++ +++ +V + ++ + G E
Sbjct: 326 GVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCG---EL 382
Query: 335 IKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREM-VAKRMKPSVSSFNAVFR 393
+K K + R D+ ++ I++ Y G EA+ + EM ++ KP+ +F A
Sbjct: 383 VKS-KLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLS 441
Query: 394 VLVAERKLEEAVLLLKNMPRM-GCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGH 452
+EE + + ++M + G P Y+ ++ L + GR E++ SM
Sbjct: 442 ACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRA-GRFNEAMEMIDSMTVEP- 499
Query: 453 NLDATMYNCLLGG 465
DA ++ LLG
Sbjct: 500 --DAAVWGSLLGA 510
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 111/237 (46%), Gaps = 8/237 (3%)
Query: 146 AVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRC 205
++L V ++ K ++ Q+V+ + DV+ + ++ + K G + ++ +FD
Sbjct: 336 SILSVCASLASLHHGKQVHAQLVR-CQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS 394
Query: 206 EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL 265
+ + I +N++I G G + A++VF S S +P+ VTF + S G V+E L
Sbjct: 395 K-DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGL 453
Query: 266 NCMKEMQEQ-GCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKG 324
+ M+ G +P Y +++ L +G +EA M+ M ++ + A S+L G
Sbjct: 454 KIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT---VEPDAAVWGSLL-G 509
Query: 325 FCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
C + + + + + Y ++ N Y G+ ++ V+ LR+++ R+
Sbjct: 510 ACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWAD-VAELRKLMKTRL 565
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 153/319 (47%), Gaps = 19/319 (5%)
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRF 235
+VF ++ + + + ARKVFDEM + +++N++I K G+ A+ +F+R
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVW-DVVSWNSIIESYAKLGKPKVALEMFSRM 219
Query: 236 AESKSCRPDVVTFTTLIDGYSKRG--EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
CRPD +T ++ + G + + L+C E N+ N L++
Sbjct: 220 TNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM--IQNMFVGNCLVDMYAKC 277
Query: 294 GNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAY 353
G +DEA + S M +KD V+ N +M+ G+ +GR E+A++ ++M + +DV +
Sbjct: 278 GMMDEANTVFSNM---SVKDVVSWN-AMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTW 333
Query: 354 SVIVNEYCKIGKPSEAVSILREMVAKRMKP------SVSSFNAVFRVLVAERKLE-EAVL 406
S ++ Y + G EA+ + R+M++ +KP SV S A L+ +++ A+
Sbjct: 334 SAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK 393
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGY 466
++ + G + + +I K K ++ + S+ S D + ++GGY
Sbjct: 394 YPIDLRKNGHGDENMVINQLIDMYAKCK-KVDTARAMFDSL--SPKERDVVTWTVMIGGY 450
Query: 467 CEDGDEEMALKTVYDMIDK 485
+ GD AL+ + +M ++
Sbjct: 451 SQHGDANKALELLSEMFEE 469
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 160/410 (39%), Gaps = 91/410 (22%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
+S NA++ + R A +++++ +E ++ DV T++ I G+ + G+ A V
Sbjct: 296 VSWNAMVAGYSQIGRFEDAVRLFEKM-QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCR 354
Query: 202 EM---RCEPNAITY----------NTMIHG-------------LCKKGEMDGAM---RVF 232
+M +PN +T ++HG L K G D M ++
Sbjct: 355 QMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLI 414
Query: 233 NRFAESK----------SCRP---DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQ-- 277
+ +A+ K S P DVVT+T +I GYS+ G+ +AL + EM E+ CQ
Sbjct: 415 DMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTR 474
Query: 278 PNVVTY------------------------------------NALIEGLCLSGNVDEAKR 301
PN T N LI+ G++ +A+
Sbjct: 475 PNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARL 534
Query: 302 MMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYC 361
+ M K N T TS++ G+ M G EEA+ EM G LD V++
Sbjct: 535 VFDNMMAK----NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS 590
Query: 362 KIGKPSEAVSILREM-VAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNF 420
G + + M + P + + +L +L A+ L++ MP P
Sbjct: 591 HSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPME--PPPV 648
Query: 421 LSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDG 470
+ + + C C++ G+++L E + + N D + Y L Y G
Sbjct: 649 VWVAFLSC--CRIHGKVELGEYAAEKITELASNHDGS-YTLLSNLYANAG 695
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 53/236 (22%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVF---- 200
NA++ + R ++ A+ ++D+ + DV ++ ++I + K+G + A ++F
Sbjct: 166 NALVAMYSRCRSLSDARKVFDE-----MSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220
Query: 201 DEMRCEPNAITY-----------------------------------NTMIHGLCKKGEM 225
+E C P+ IT N ++ K G M
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMM 280
Query: 226 DGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNA 285
D A VF+ + DVV++ ++ GYS+ G ++A+ ++MQE+ + +VVT++A
Sbjct: 281 DEANTVFSNMSVK-----DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 286 LIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEM 341
I G G EA + +M GIK N T S+L G VG A+ H KE+
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVG----ALMHGKEI 387
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 153/337 (45%), Gaps = 52/337 (15%)
Query: 150 VLVRAN--RVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEP 207
+L AN + +A ++D K V +++M G+ K G ++ A ++FDEM +
Sbjct: 154 ILFHANCGDLGIASELFDDSAKAHKV-----AWSSMTSGYAKRGKIDEAMRLFDEMPYK- 207
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
+ + +N MI G K EMD A +F+RF E DVVT+ +I GY G +EAL
Sbjct: 208 DQVAWNVMITGCLKCKEMDSARELFDRFTEK-----DVVTWNAMISGYVNCGYPKEALGI 262
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCM 327
KEM++ G P+VVT +L+ + G+++ KR+ I + + ++S+ G
Sbjct: 263 FKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIY-----ILETASVSSSIYVG--- 314
Query: 328 VGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSS 387
++ +++ Y K G A+ + R + + +S+
Sbjct: 315 ----------------------TPIWNALIDMYAKCGSIDRAIEVFRGVKDR----DLST 348
Query: 388 FNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM 447
+N + V +A E ++ + + M R+ PN +++ VI C GR+ + S+
Sbjct: 349 WNTLI-VGLALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILA-CSHSGRVDEGRKYF-SL 405
Query: 448 LQSGHNLDATM--YNCLLGGYCEDGDEEMALKTVYDM 482
++ +N++ + Y C++ G E A V M
Sbjct: 406 MRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESM 442
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM- 203
NA++ + + ++ A ++ + + D+ T+ T+I G + E + ++F+EM
Sbjct: 319 NALIDMYAKCGSIDRAIEVF-----RGVKDRDLSTWNTLIVGLA-LHHAEGSIEMFEEMQ 372
Query: 204 --RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEV 261
+ PN +T+ +I G +D + F+ + + P++ + ++D + G++
Sbjct: 373 RLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQL 432
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
+EA ++ M+ +PN + + L+ + GNV+ K K+
Sbjct: 433 EEAFMFVESMK---IEPNAIVWRTLLGACKIYGNVELGKYANEKL 474
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 69/116 (59%)
Query: 264 ALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLK 323
AL + M+E G P+V+ Y LI+G +SG +D+AK M +M +KG NV T SM++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 324 GFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
G CM G EA +KEM SRG + + YS +V K GK SEA +++EMV K
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKK 823
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 4/118 (3%)
Query: 168 VKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGE 224
+KE ++P V YTT+I G+ G ++ A+++F EM + PN TYN+MI GLC GE
Sbjct: 715 MKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGE 774
Query: 225 MDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVT 282
A + ES+ C P+ V ++TL+ K G++ EA +KEM ++G ++V+
Sbjct: 775 FREACWLLKEM-ESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHYVHLVS 831
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
A+ N E P V+ +TTLIDGY GE+ +A +EM +G PNV TYN++
Sbjct: 707 AALTTLNHMKEV-GIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSM 765
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG 345
I GLC++G EA ++ +M +G N ++++ G+ EA K +KEMV +G
Sbjct: 766 IRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 334 AIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFR 393
+ HMKE+ G+D V Y+ +++ Y G+ +A + REM K P+V ++N++ R
Sbjct: 711 TLNHMKEV---GIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 394 VLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGH 452
L + EA LLK M GC+PNF+ YS ++ G + G++ +++ M++ GH
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV-GYLRKAGKLSEARKVIKEMVKKGH 825
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 147/317 (46%), Gaps = 20/317 (6%)
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAM 229
E + E D ++ +M+ G K G + AR++FDEM + + I++NTM+ G + EM A
Sbjct: 178 EKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMP-QRDLISWNTMLDGYARCREMSKAF 236
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEG 289
+F + E + V+++T++ GYSK G+++ A +M NVVT+ +I G
Sbjct: 237 ELFEKMPERNT-----VSWSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAG 289
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
G + EA R++ +M G+K + A S+L G ++ + + +
Sbjct: 290 YAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSN 349
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
+ +++ Y K G +A + ++ K + S+N + L +EA+ L
Sbjct: 350 AYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFS 405
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM--LQSGHNL--DATMYNCLLGG 465
M R G P+ +++ V+C C G L++E + ++ ++L Y CL+
Sbjct: 406 RMRREGIRPDKVTFIAVLCS-CNHAG---LIDEGIDYFYSMEKVYDLVPQVEHYGCLVDL 461
Query: 466 YCEDGDEEMALKTVYDM 482
G + A+K V M
Sbjct: 462 LGRVGRLKEAIKVVQTM 478
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/461 (20%), Positives = 207/461 (44%), Gaps = 75/461 (16%)
Query: 35 SCYLTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHP---RSC----YAAITDVL 87
+ +L SL+ +N+ P+ A F F+ +N+++P ++C + + ++
Sbjct: 81 NVHLCNSLIRAHAQNSQ-PYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMM 139
Query: 88 LSHSLFSTADSLLRRSNKLSD-FLASKFINAFGDRGD--IRGAIHWFHKAKASGPCALSC 144
+H + + SD ++ + I+ + G +R A+ F K +S
Sbjct: 140 HNH---------IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD--TVSW 188
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR 204
N++LG LV+A + A+ ++D++ + D+ ++ TM+ G+ + + A ++F++M
Sbjct: 189 NSMLGGLVKAGELRDARRLFDEMPQR-----DLISWNTMLDGYARCREMSKAFELFEKMP 243
Query: 205 CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEA 264
E N ++++TM+ G K G+M+ A +F++ +VVT+T +I GY+++G ++EA
Sbjct: 244 -ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAK---NVVTWTIIIAGYAEKGLLKEA 299
Query: 265 LNCMKEMQEQGCQ-----------------------------------PNVVTYNALIEG 289
+ +M G + N NAL++
Sbjct: 300 DRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDM 359
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
GN+ +A + + + KD V+ NT ML G + G +EAI+ M G+ D
Sbjct: 360 YAKCGNLKKAFDVFNDI---PKKDLVSWNT-MLHGLGVHGHGKEAIELFSRMRREGIRPD 415
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMV-AKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
+ ++ G E + M + P V + + +L +L+EA+ ++
Sbjct: 416 KVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVV 475
Query: 409 KNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
+ MP PN + + ++ G C++ + + +E++ ++++
Sbjct: 476 QTMP---MEPNVVIWGALL-GACRMHNEVDIAKEVLDNLVK 512
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 150/353 (42%), Gaps = 65/353 (18%)
Query: 197 RKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYS 256
R + +++ P I+ + LC++ + A+RVFN+ E P+V +LI ++
Sbjct: 45 RNLHEDLHIAPKLISALS----LCRQTNL--AVRVFNQVQE-----PNVHLCNSLIRAHA 93
Query: 257 KRGEVQEALNCMKEMQEQGCQPNVVTYNAL-------------------IEGLCLSGN-- 295
+ + +A EMQ G + TY L IE L LS +
Sbjct: 94 QNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIY 153
Query: 296 ----------------VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMK 339
V +A ++ KM +D V+ N SML G G +A +
Sbjct: 154 VPNALIDCYSRCGGLGVRDAMKLFEKM---SERDTVSWN-SMLGGLVKAGELRDARRLFD 209
Query: 340 EMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAER 399
EM R D+ +++ +++ Y + + S+A + +M + + S++ +
Sbjct: 210 EMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAG 261
Query: 400 KLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMY 459
+E A ++ MP + N ++++I+I G + KG ++ + LV M+ SG DA
Sbjct: 262 DMEMARVMFDKMPL--PAKNVVTWTIIIAGYAE-KGLLKEADRLVDQMVASGLKFDAAAV 318
Query: 460 NCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAK-GKVKEEY 511
+L E G + ++ ++ ++ +S L + + ++ AK G +K+ +
Sbjct: 319 ISILAACTESGLLSLGMR-IHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAF 370
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 160/355 (45%), Gaps = 56/355 (15%)
Query: 95 TADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRA 154
T SLL LSD K ++ + +R RG ++ S LS NA+L + +
Sbjct: 234 TVLSLLVCCGHLSDIRLGKGVHGWIER---RGPVY-------SSNLILS-NALLDMYFKC 282
Query: 155 NRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNT 214
LAK +D A+ + D+ ++ TM+ GF ++G +E+A+ VFD+M + + +++N+
Sbjct: 283 KESGLAKRAFD-----AMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP-KRDLVSWNS 336
Query: 215 MIHGLCKKG-EMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL---NCMKE 270
++ G KKG + +F + +PD VT +LI G + GE+ +
Sbjct: 337 LLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIR 396
Query: 271 MQEQG----------------------------CQPNVVTYNALIEGLCLSGNVDEAKRM 302
+Q +G + +V + ++I GL GN +A ++
Sbjct: 397 LQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQL 456
Query: 303 MSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAI---KHMKEMVSRGMDLDVKAYSVIVNE 359
+M+ +G+ N T ++L G EE + HMK+ G D + + Y +V+
Sbjct: 457 FGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKF--GFDPETEHYGSLVDL 514
Query: 360 YCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRM 414
C+ G+ EA I+++ + M+PS S + ++ +E A L L + ++
Sbjct: 515 LCRAGRVEEAKDIVQKKMP--MRPSQSMWGSILSACRGGEDIETAELALTELLKL 567
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 191/435 (43%), Gaps = 63/435 (14%)
Query: 109 FLASKFINAFGDRGDIRGA--IHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQ 166
F S + A G ++G IH F K N ++G+ ++ + L++ ++D+
Sbjct: 122 FSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDR 181
Query: 167 VVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE-PNAITYNTMIHGLCKKGE- 224
+ K D +Y +MI G+ K G++ SAR++FD M E N I++N+MI G + +
Sbjct: 182 MPKR-----DSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDG 236
Query: 225 MDGAMRVF---------------------NRFAESKSC-----RPDVVTFTTLIDGYSKR 258
+D A ++F R ++K R DVVT+ T+IDGY+K
Sbjct: 237 VDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKL 296
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG-IKDNVAT 317
G V A K + +Q +VV YN+++ G + EA + S M + + + T
Sbjct: 297 GFVHHA----KTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTT 352
Query: 318 NTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMV 377
+L +GR +AI +V + L K +++ Y K G A+ + +
Sbjct: 353 LVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIE 412
Query: 378 AKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRM 437
K S+ +NA+ L E A +L + R+ P+ +++ + + C G
Sbjct: 413 NK----SIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITF-VGVLNACSHSG-- 465
Query: 438 QLVEE--LVSSMLQSGHNLDATM--YNCLLGGYCEDGDEEMALKTVY-------DMIDKS 486
LV+E L +++ H ++ + Y C++ G E+A + D+I ++
Sbjct: 466 -LVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRT 524
Query: 487 FLFNKDTYCTFVKEL 501
FL T C+ KE
Sbjct: 525 FL----TACSHHKEF 535
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 133/264 (50%), Gaps = 10/264 (3%)
Query: 127 AIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMI 184
AI WF + +G P ++ +A+L V ++ +V ++Y++ V +PD ++ +
Sbjct: 240 AIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGW-KPDAIAFSVLG 298
Query: 185 RGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSC 241
+ F + G + R V EM+ +PN + YNT++ + + G+ A +FN E+
Sbjct: 299 KMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEA-GL 357
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKR 301
P+ T T L+ Y K ++AL +EM+ + + + YN L+ G +EA+R
Sbjct: 358 TPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAER 417
Query: 302 MMSKMR--LKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNE 359
+ + M+ ++ DN + T+ML + G++E+A++ +EM+ G+ ++V + +V
Sbjct: 418 LFNDMKESVQCRPDNFSY-TAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQC 476
Query: 360 YCKIGKPSEAVSILREMVAKRMKP 383
K + + V + + + +KP
Sbjct: 477 LGKAKRIDDVVYVFDLSIKRGVKP 500
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 130/268 (48%), Gaps = 10/268 (3%)
Query: 80 YAAITDVLLSHSLFSTADSLLRR---SNKLSDFLASKFINA-FGDRGDIRGAIHWFHKAK 135
Y+AI DV SL R + D +A + FG+ GD G + + K
Sbjct: 259 YSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMK 318
Query: 136 ASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMV 193
+ P + N +L + RA + LA++++++++ EA + P+ T T +++ + K
Sbjct: 319 SMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEML-EAGLTPNEKTLTALVKIYGKARWA 377
Query: 194 ESARKVFDEMRCEP---NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTT 250
A ++++EM+ + + I YNT+++ G + A R+FN ES CRPD ++T
Sbjct: 378 RDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTA 437
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG 310
+++ Y G+ ++A+ +EM + G Q NV+ L++ L + +D+ + +G
Sbjct: 438 MLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRG 497
Query: 311 IKDNVATNTSMLKGFCMVGRSEEAIKHM 338
+K + +L + SE+A K M
Sbjct: 498 VKPDDRLCGCLLSVMALCESSEDAEKVM 525
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 123/259 (47%), Gaps = 3/259 (1%)
Query: 206 EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL 265
E + ITY+T+I + + A+ F R ++ PD VT++ ++D YSK G+V+E L
Sbjct: 218 ELDNITYSTIITCAKRCNLYNKAIEWFERMYKT-GLMPDEVTYSAILDVYSKSGKVEEVL 276
Query: 266 NCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGF 325
+ + G +P+ + ++ L + +G+ D + ++ +M+ +K NV ++L+
Sbjct: 277 SLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAM 336
Query: 326 CMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSV 385
G+ A EM+ G+ + K + +V Y K +A+ + EM AK+
Sbjct: 337 GRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDF 396
Query: 386 SSFNAVFRVLVAERKLEEAVLLLKNMPR-MGCSPNFLSYSIVICGLCKVKGRMQLVEELV 444
+N + + EEA L +M + C P+ SY+ ++ + G+ + EL
Sbjct: 397 ILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAML-NIYGSGGKAEKAMELF 455
Query: 445 SSMLQSGHNLDATMYNCLL 463
ML++G ++ CL+
Sbjct: 456 EEMLKAGVQVNVMGCTCLV 474
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 8/256 (3%)
Query: 231 VFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK-EMQEQGCQPNVVTYNALIEG 289
F + +SKS P F + + G + + M EM + G + + +TY+ +I
Sbjct: 171 TFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITC 230
Query: 290 LCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
++A +M G+ + T +++L + G+ EE + + V+ G D
Sbjct: 231 AKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPD 290
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
A+SV+ + + G +L+EM + +KP+V +N + + K A L
Sbjct: 291 AIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFN 350
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVE---ELVSSMLQSGHNLDATMYNCLLGGY 466
M G +PN + L K+ G+ + +L M +D +YN LL
Sbjct: 351 EMLEAGLTPN----EKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMC 406
Query: 467 CEDGDEEMALKTVYDM 482
+ G EE A + DM
Sbjct: 407 ADIGLEEEAERLFNDM 422
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 18/265 (6%)
Query: 149 GVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPN 208
G L+ A R+ L ++ DV + +MI GF K G+++ A+ +FDEM + N
Sbjct: 175 GCLIEAWRIFLG-----------MIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMP-QRN 222
Query: 209 AITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCM 268
+++N+MI G + G A+ +F E K +PD T +L++ + G ++
Sbjct: 223 GVSWNSMISGFVRNGRFKDALDMFREMQE-KDVKPDGFTMVSLLNACAYLGASEQGRWIH 281
Query: 269 KEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMV 328
+ + + N + ALI+ C G ++E + K ++ SM+ G
Sbjct: 282 EYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFEC----APKKQLSCWNSMILGLANN 337
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM-KPSVSS 387
G E A+ E+ G++ D ++ ++ G+ A R M K M +PS+
Sbjct: 338 GFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKH 397
Query: 388 FNAVFRVLVAERKLEEAVLLLKNMP 412
+ + VL LEEA L+KNMP
Sbjct: 398 YTLMVNVLGGAGLLEEAEALIKNMP 422
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 139/307 (45%), Gaps = 18/307 (5%)
Query: 145 NAVLGVLVRANRVNLAKAIY-DQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM 203
N ++ R++ +A +I+ D + V+P TY ++ + + ++G R++ +
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 204 ---RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGE 260
E ++ NTM+H G + A R+F DVV + ++I G++K G
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF-----DVVAWNSMIMGFAKCGL 207
Query: 261 VQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTS 320
+ +A N EM Q N V++N++I G +G +A M +M+ K +K + T S
Sbjct: 208 IDQAQNLFDEMP----QRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 321 MLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKR 380
+L +G SE+ + +V +L+ + +++ YCK G E +++ K+
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQ 323
Query: 381 MKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLV 440
+ S +N++ L E A+ L + R G P+ +S+ I + C G +
Sbjct: 324 L----SCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSF-IGVLTACAHSGEVHRA 378
Query: 441 EELVSSM 447
+E M
Sbjct: 379 DEFFRLM 385
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 140/299 (46%), Gaps = 13/299 (4%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVE 174
I+++ +GD+ A F P S N ++G V + LA+ +D A+ +
Sbjct: 208 ISSYAKKGDMGNACSLFSAMPLKSPA--SWNILIGGYVNCREMKLARTYFD-----AMPQ 260
Query: 175 PDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNR 234
+ ++ TMI G+ K+G V+SA ++F M + + + Y+ MI + G+ A+++F +
Sbjct: 261 KNGVSWITMISGYTKLGDVQSAEELFRLM-SKKDKLVYDAMIACYTQNGKPKDALKLFAQ 319
Query: 235 FAESKS-CRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
E S +PD +T ++++ S+ G + E G + + + +LI+
Sbjct: 320 MLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKG 379
Query: 294 GNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAY 353
G+ +A +M S + K + + ++M+ G + G + EA M+ + + +V +
Sbjct: 380 GDFAKAFKMFSNLN----KKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTF 435
Query: 354 SVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMP 412
+ +++ Y G E M ++PS + + +L +LEEA L+K+MP
Sbjct: 436 TGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMP 494
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 176/403 (43%), Gaps = 47/403 (11%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P + + +VL + + K I+ Q +K L V+ T ++ + ++G +E A+K
Sbjct: 102 PSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGC-VYVQTGLVGLYSRLGYIELAKK 160
Query: 199 VFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
FD++ E N +++N+++HG + GE+D A RVF++ E D V++ +I Y+K+
Sbjct: 161 AFDDI-AEKNTVSWNSLLHGYLESGELDEARRVFDKIPEK-----DAVSWNLIISSYAKK 214
Query: 259 GEVQEA----------------------LNCMKEMQ------EQGCQPNVVTYNALIEGL 290
G++ A +NC +EM+ + Q N V++ +I G
Sbjct: 215 GDMGNACSLFSAMPLKSPASWNILIGGYVNC-REMKLARTYFDAMPQKNGVSWITMISGY 273
Query: 291 CLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG--MDL 348
G+V A+ + RL KD + + +M+ + G+ ++A+K +M+ R +
Sbjct: 274 TKLGDVQSAEELF---RLMSKKDKLVYD-AMIACYTQNGKPKDALKLFAQMLERNSYIQP 329
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
D S +V+ ++G S + + +K ++ + + +A +
Sbjct: 330 DEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMF 389
Query: 409 KNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCE 468
N+ + + +SYS +I G C + G L ++M++ + + LL Y
Sbjct: 390 SNLNK----KDTVSYSAMIMG-CGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSH 444
Query: 469 DGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY 511
G + K M D + + D Y V L G+++E Y
Sbjct: 445 SGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAY 487
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 169/410 (41%), Gaps = 85/410 (20%)
Query: 98 SLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRV 157
S+LR K+ + + K I+A + + G C ++G+ R +
Sbjct: 109 SVLRACGKMENMVDGKPIHAQALKNGLCG-------------CVYVQTGLVGLYSRLGYI 155
Query: 158 NLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIH 217
LAK +D + E + ++ +++ G+ + G ++ AR+VFD++ E +A+++N +I
Sbjct: 156 ELAKKAFDDIA-----EKNTVSWNSLLHGYLESGELDEARRVFDKIP-EKDAVSWNLIIS 209
Query: 218 GLCKKGEMDGAMRVFNRFAESK------------SCRP--------------DVVTFTTL 251
KKG+M A +F+ +CR + V++ T+
Sbjct: 210 SYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITM 269
Query: 252 IDGYSKRGEVQ-------------------------------EALNCMKEMQEQGC--QP 278
I GY+K G+VQ +AL +M E+ QP
Sbjct: 270 ISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQP 329
Query: 279 NVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHM 338
+ +T ++++ GN + S + GIK + +TS++ + G +A K
Sbjct: 330 DEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFK-- 387
Query: 339 KEMVSRGMDLDVKAYSVIVNEYCKI-GKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVA 397
M S D +YS ++ C I G +EA S+ M+ K++ P+V +F +
Sbjct: 388 --MFSNLNKKDTVSYSAMIMG-CGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSH 444
Query: 398 ERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM 447
++E +M P+ Y I++ L + GR++ EL+ SM
Sbjct: 445 SGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRA-GRLEEAYELIKSM 493
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 103/248 (41%), Gaps = 14/248 (5%)
Query: 66 PQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIR 125
PQ N ++ S Y + DV +A+ L R +K + I + G +
Sbjct: 259 PQKNGVSWITMISGYTKLGDV-------QSAEELFRLMSKKDKLVYDAMIACYTQNGKPK 311
Query: 126 GAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEP----DVFTYT 181
A+ F + L +V AN L + V+ + E D T
Sbjct: 312 DALKLFAQMLERNSYIQPDEITLSSVVSANS-QLGNTSFGTWVESYITEHGIKIDDLLST 370
Query: 182 TMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSC 241
++I + K G A K+F + + + ++Y+ MI G G A +F E K
Sbjct: 371 SLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGINGMATEANSLFTAMIEKK-I 428
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKR 301
P+VVTFT L+ YS G VQE C M++ +P+ Y +++ L +G ++EA
Sbjct: 429 PPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYE 488
Query: 302 MMSKMRLK 309
++ M ++
Sbjct: 489 LIKSMPMQ 496
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 134/283 (47%), Gaps = 15/283 (5%)
Query: 165 DQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGE 224
D++ KE+ + + +I G+C+ + A +F M E N+ +++T+I G GE
Sbjct: 189 DRIKKES-----ILIWNVLINGYCRAKDMHMATTLFRSM-PERNSGSWSTLIKGYVDSGE 242
Query: 225 MDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
++ A ++F E +VV++TTLI+G+S+ G+ + A++ EM E+G +PN T
Sbjct: 243 LNRAKQLFELMPEK-----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIA 297
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
A++ SG + R+ + GIK + A T+++ + G + A M +
Sbjct: 298 AVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK 357
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA 404
D+ +++ ++ + G+ +A+ R+M+ KP F AV + +++
Sbjct: 358 ----DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLG 413
Query: 405 VLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSM 447
+ +M L + +++ L G++ ELV +M
Sbjct: 414 LNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENM 456
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 174 EPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAMR 230
E + F +IRG + ES+ + F M +P+ +T+ ++ K G R
Sbjct: 88 ERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLG-----FR 142
Query: 231 VFNRFAESKSCRP----DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
R + + + D +L+D Y+K G+++ A +E ++ + +++ +N L
Sbjct: 143 WLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVL 202
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
I G C + ++ A + M + N + ++++KG+ G A K + E++
Sbjct: 203 INGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRA-KQLFELMP--- 254
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVF 392
+ +V +++ ++N + + G A+S EM+ K +KP+ + AV
Sbjct: 255 EKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVL 300
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 10/176 (5%)
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
M +F ++ + + VT+TTLI G + G+ A KEM G P+++TYN L++
Sbjct: 1 MELFREMSQ-RGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLD 59
Query: 289 GLC---------LSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMK 339
GLC ++G V++ + + LKG+K NV T T+M+ GFC G EEA +
Sbjct: 60 GLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 340 EMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVL 395
+M G D Y+ ++ + + G + + +++EM + R S++ V +L
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 89/157 (56%), Gaps = 14/157 (8%)
Query: 163 IYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGL 219
++ ++ + LV V TYTT+I+G + G + A+++F EM + P+ +TYN ++ GL
Sbjct: 3 LFREMSQRGLVGNTV-TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 220 CKKGEMDGAMRVFNRFAES---------KSCRPDVVTFTTLIDGYSKRGEVQEALNCMKE 270
CK G+++ A+ V + + K +P+VVT+TT+I G+ K+G +EA ++
Sbjct: 62 CKNGKLEKAL-VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 271 MQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR 307
M+E G P+ TYN LI G+ + ++ +MR
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 157
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
N +TY T+I GL + G+ D A +F S PD++T+ L+DG K G++++AL
Sbjct: 15 NTVTYTTLIQGLFQAGDCDMAQEIFKEMV-SDGVPPDIMTYNILLDGLCKNGKLEKALVA 73
Query: 268 MK---------EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
K + +G +PNVVTY +I G C G +EA + KM+ G + T
Sbjct: 74 GKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTY 133
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVN 358
++++ G + + +KEM S D Y ++ +
Sbjct: 134 NTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 151 LVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVES---ARKVFD--EMRC 205
L +A ++A+ I+ ++V + V PD+ TY ++ G CK G +E A KV D ++ C
Sbjct: 26 LFQAGDCDMAQEIFKEMVSDG-VPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFC 84
Query: 206 -------EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
+PN +TY TMI G CKKG + A +F + E PD T+ TLI + +
Sbjct: 85 SLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPL-PDSGTYNTLIRAHLRD 143
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEA 299
G+ + +KEM+ + TY L+ + G +D+
Sbjct: 144 GDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKG 183
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 265 LNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKG 324
+ +EM ++G N VTY LI+GL +G+ D A+ + +M G+ ++ T +L G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 325 FCMVGRSEEAIKHMKEMVSRGMDL-----------DVKAYSVIVNEYCKIGKPSEAVSIL 373
C G+ E+A+ K V G DL +V Y+ +++ +CK G EA ++
Sbjct: 61 LCKNGKLEKALVAGK--VEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLF 118
Query: 374 REMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
R+M P ++N + R + + + L+K M + + +Y +V
Sbjct: 119 RKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 171
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 11/184 (5%)
Query: 339 KEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAE 398
+EM RG+ + Y+ ++ + G A I +EMV+ + P + ++N + L
Sbjct: 5 REMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKN 64
Query: 399 RKLEEAVL---------LLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
KLE+A++ L ++ G PN ++Y+ +I G CK KG + L M +
Sbjct: 65 GKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCK-KGFKEEAYTLFRKMKE 123
Query: 450 SGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
G D+ YN L+ + DGD+ + + + +M F + TY V ++ G++ +
Sbjct: 124 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDK 182
Query: 510 EYLK 513
+L+
Sbjct: 183 GFLE 186
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/522 (20%), Positives = 201/522 (38%), Gaps = 84/522 (16%)
Query: 60 FNWASNPQPNPNNYSH-PRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASK----- 113
F WAS + H P++C + +L+ + + LL + D + ++
Sbjct: 133 FRWAS---VQYQGFKHLPQAC-EIMASMLIREGMVKEVELLLMEMERHGDTMVNEGIFCD 188
Query: 114 FINAFGDRGDIRGAIHWFHKAKASGPCAL-SCNAVL-GVLVRANRVNLAKAI-------- 163
I + D D R A+ F + G L SC +L LVR +R A I
Sbjct: 189 LIGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETR 248
Query: 164 -------------------YDQVVKEALVEPDVFT----------YTTMIRGFCKMGMVE 194
DQ V+EA V Y+ + G+ + E
Sbjct: 249 AELNHMNIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFE 308
Query: 195 SARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDG 254
E++ EP+ N ++H LC++ + A V+ E + D VTF LI
Sbjct: 309 DLLSFIGEVKYEPDVFVGNRILHSLCRRFGSERAY-VYMEELEHLGFKQDEVTFGILIGW 367
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
G+++ A+ + E+ +G +P+V +YNA++ GL G ++ +M+ G+ +
Sbjct: 368 CCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLS 427
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
++T M+ G+C + EEA + + +M G+ K + + +G AV + R
Sbjct: 428 LSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKR 487
Query: 375 E--------------------------------MVAKRMKPSVSSFNAVFRVLVAERKLE 402
+ MV R + FN++ + L+
Sbjct: 488 DNDSTFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDR--SVLPEFNSLIVRASEDGDLQ 545
Query: 403 EAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCL 462
A+ LL M R G + S+++++ LC + +++ L+ + + LD N L
Sbjct: 546 TALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFL 605
Query: 463 LGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAK 504
+ YC+ G + + M+ + TY + ++ C K
Sbjct: 606 VQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKK 647
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 172/395 (43%), Gaps = 60/395 (15%)
Query: 160 AKAIYDQVVKEALVEP-DVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTM 215
+K I+ ++V+ + P D TYT++IR FCK + V+ + + P+ +
Sbjct: 618 SKLIFHKMVQ--MHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDL 675
Query: 216 IHGLCKKGEMDGAMRVFNR------FAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK 269
+ L +KG ++ +++F R ++S++CR V T L G+S A + +K
Sbjct: 676 WNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVL--GFSCI-----AHSVVK 728
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK-------------------- 309
++ +GC YN LI+GLC A ++ +M K
Sbjct: 729 RLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRAN 788
Query: 310 --GIKDNVA-------TNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEY 360
G N+A + +++KG + G+ +A ++ M+S G+ K Y+V+ Y
Sbjct: 789 KAGTAFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGY 848
Query: 361 CKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERK------LEEAVLLLKNMPRM 414
CK + +L MV K + SV S+ R + E + L+E +LL ++ P
Sbjct: 849 CKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNP-- 906
Query: 415 GCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEM 474
+ Y+++I + + K ++ V +++ M G D T +N L+ GY D
Sbjct: 907 ---GGVIIYNMLIFYMFRAKNHLE-VNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSS 962
Query: 475 ALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
+L+ + MI K N + LC G VK+
Sbjct: 963 SLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKK 997
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/431 (19%), Positives = 175/431 (40%), Gaps = 59/431 (13%)
Query: 122 GDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFT 179
GDI+ A+ + + + G P S NA+L L R I D++ KE + + T
Sbjct: 372 GDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEM-KENGMMLSLST 430
Query: 180 YTTMIRGFCKMGMVESARKVFDEM----------------------RCEPNAIT------ 211
+ M+ G+CK E A+++ ++M +P A+
Sbjct: 431 FKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDND 490
Query: 212 --------YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQE 263
++ + +GL ++D + N + +S P+ F +LI S+ G++Q
Sbjct: 491 STFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLD-RSVLPE---FNSLIVRASEDGDLQT 546
Query: 264 ALNCMKEMQEQGCQPNVVTYNALIEGLCLS-GNVDEAKRMMSKMRLKGIKDNVATNTSML 322
AL + EM G + + ++ L+ LC S ++ + ++ K + + T ++
Sbjct: 547 ALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLV 606
Query: 323 KGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMK 382
+ +C G S + +MV +D Y+ ++ +CK ++ +++
Sbjct: 607 QEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWL 666
Query: 383 PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCK-------VKG 435
P ++ ++ LV + +EE V L + + F+SY + C+ V G
Sbjct: 667 PDLNDCGDLWNCLVRKGLVEEVVQLFERV--------FISYPLSQSEACRIFVEKLTVLG 718
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYC 495
+ +V + G ++ +YN L+ G C + + A + +M+DK + + +
Sbjct: 719 FSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCL 778
Query: 496 TFVKELCAKGK 506
+ LC K
Sbjct: 779 MLIPRLCRANK 789
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 134/294 (45%), Gaps = 12/294 (4%)
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRP-DVVTFTTLIDGYSKRGEVQEALNCMK 269
T N ++ CKKG + +F++ + P D VT+T+LI + K+ + + LN
Sbjct: 601 TLNFLVQEYCKKGFSRHSKLIFHKMVQMH--HPIDNVTYTSLIRCFCKKETLNDLLNVWG 658
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG 329
Q P++ L L G V+E ++ ++ + ++ ++G
Sbjct: 659 AAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLG 718
Query: 330 RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFN 389
S A +K + G ++ + Y+ ++ C K S A +IL EM+ K+ PS+ S
Sbjct: 719 FSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCL 778
Query: 390 AVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQ 449
+ L K A L + + +++ Y++ I GL + G+M E + ML
Sbjct: 779 MLIPRLCRANKAGTAFNLAEQI-----DSSYVHYAL-IKGL-SLAGKMLDAENQLRIMLS 831
Query: 450 SGHNLDATMYNCLLGGYCEDGDEEMALKTVYD-MIDKSFLFNKDTYCTFVKELC 502
+G + +YN + GYC+ G+ M ++ V M+ K+ + + +Y +V+++C
Sbjct: 832 NGLSSYNKIYNVMFQGYCK-GNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMC 884
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 115/266 (43%), Gaps = 7/266 (2%)
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMDGAM 229
V PD T+ ++ G+ S+ + M +PN + + LC G++ A+
Sbjct: 940 VLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKAL 999
Query: 230 RVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQ-PNVVTYNALIE 288
++ V T +++ +GE+ +A + + + G PN Y+ +I+
Sbjct: 1000 DLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPN---YDNIIK 1056
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
L GN+D A +++ M ++ S++ G + ++A+ EMV G+
Sbjct: 1057 KLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSP 1116
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
+ +S +V+++C+ + E+ +++ MV PS F V E+ +A ++
Sbjct: 1117 SISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMM 1176
Query: 409 KNMPRMGCSPNFLSYSIVICGLCKVK 434
+ M + G +F ++ +I + K
Sbjct: 1177 EMMQKCGYEVDFETHWSLISNMSSSK 1202
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 127/322 (39%), Gaps = 40/322 (12%)
Query: 180 YTTMIRGFCKMGMVESARKVFDEMRCEPNAI----TYNTMIHGLCKKGEMDGAMRVFNRF 235
Y M +G+CK +V M N I +Y + +C + + A+ +
Sbjct: 841 YNVMFQGYCKGNNWMKVEEVLGLM-VRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFL 899
Query: 236 AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
+S V+ + LI + E + EMQ +G P+ T+N L+ G S +
Sbjct: 900 LLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSAD 959
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKA--- 352
+ R +S M KG+K N + ++ C G ++A+ + M S+G +L
Sbjct: 960 YSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQT 1019
Query: 353 -------------------------------YSVIVNEYCKIGKPSEAVSILREMVAKRM 381
Y I+ + G AV +L M+ +
Sbjct: 1020 KIVETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQS 1079
Query: 382 KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVE 441
P SS+++V L+ +L++A+ M +G SP+ ++S ++ C+ ++ E
Sbjct: 1080 IPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLE-SE 1138
Query: 442 ELVSSMLQSGHNLDATMYNCLL 463
L+ SM+ G + M+ ++
Sbjct: 1139 RLIKSMVGLGESPSQEMFKTVI 1160
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/465 (19%), Positives = 200/465 (43%), Gaps = 19/465 (4%)
Query: 55 HALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLAS-- 112
+A+ FF+W N+ Y+ I VL + A+ L++ +F S
Sbjct: 156 NAIKFFDWMRCNGKLVGNFV----AYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQ 211
Query: 113 ---KFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQV 167
I A +G+++ A WFH G P + ++G+ + V A+ + +
Sbjct: 212 VFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHM 271
Query: 168 VKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGE 224
K +V Y++MI + ++ + + A +V D M R + M++ ++G+
Sbjct: 272 RKFGIVCES--AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGK 329
Query: 225 MDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
M+ A + E+ P+++ + TLI GY K +++ A + G +P+ +Y
Sbjct: 330 MELAESILVSM-EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYR 388
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
++IEG + N +EAK +++ G K N +++ G + AIK +++M
Sbjct: 389 SMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGI 448
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA 404
G +I+ Y K+GK +L+ ++ + +SF+++ V +++
Sbjct: 449 GCQYS-SILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDC 507
Query: 405 VLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLG 464
+ LL+ + Y ++IC CK G++ ++ + ++S ++ + + ++
Sbjct: 508 LGLLREKKWRDSAFESHLYHLLICS-CKESGQLTDAVKIYNHKMESDEEINLHITSTMID 566
Query: 465 GYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
Y G+ A K ++ + ++ + V+ G ++E
Sbjct: 567 IYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEE 611
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 118/543 (21%), Positives = 221/543 (40%), Gaps = 101/543 (18%)
Query: 56 ALFFFNWASNPQPNPNNYSHPR-------SCYAAITDVLLSHSLFSTADSLL------RR 102
L+ NW N + +SH R S Y+++ + L+ A+ ++ R
Sbjct: 253 GLYQKNW--NVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRV 310
Query: 103 SNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLA 160
KL ++L +NA+ +G + A +A+G P ++ N ++ + ++ A
Sbjct: 311 RLKLENWLV--MLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAA 368
Query: 161 KAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM-RC--EPNAITYNTMIH 217
+ ++ ++ L EPD +Y +MI G+ + E A+ + E+ RC +PN+ T+I+
Sbjct: 369 QGLFHRLCNIGL-EPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLIN 427
Query: 218 GLCKKGEMDGAMRVFNRF----------------AESKSCRPDVV--------------- 246
K G+ DGA++ A K + DVV
Sbjct: 428 LQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLN 487
Query: 247 --TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMS 304
+F++L+ Y K G V + L ++E + + Y+ LI SG + +A ++ +
Sbjct: 488 QTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYN 547
Query: 305 KMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIG 364
+ N+ ++M+ + ++G EA K + S G+ LD +S++V Y K G
Sbjct: 548 HKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAG 607
Query: 365 KPSEAVSILREM-VAKRMKPSVSSFNAVFRV-------------LVAERK---------- 400
EA S+L M K + P V F + R+ RK
Sbjct: 608 SLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMY 667
Query: 401 ------------LEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
L+E + M R G +PN +++++ L V G+ +L +++ L
Sbjct: 668 NCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNV----LLDVYGKAKLFKKVNELFL 723
Query: 449 QSGHN--LDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGK 506
+ + +D YN ++ Y ++ D + +M F + + Y T L A GK
Sbjct: 724 LAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTL---LDAYGK 780
Query: 507 VKE 509
K+
Sbjct: 781 DKQ 783
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 155/348 (44%), Gaps = 12/348 (3%)
Query: 160 AKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEP---NAITYNTMI 216
A IY+ + E+ E ++ +TMI + MG A K++ ++ + I ++ ++
Sbjct: 542 AVKIYNHKM-ESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVV 600
Query: 217 HGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK-EMQEQG 275
K G ++ A V E K PDV F ++ Y K ++Q+ L + +++ G
Sbjct: 601 RMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQK-CDLQDKLQHLYYRIRKSG 659
Query: 276 CQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSE--E 333
N YN +I + +DE +M G N T +L + G+++ +
Sbjct: 660 IHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVY---GKAKLFK 716
Query: 334 AIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFR 393
+ + + R +DV +Y+ I+ Y K + S ++ M S+ ++N +
Sbjct: 717 KVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLD 776
Query: 394 VLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHN 453
++++E+ +LK M + P+ +Y+I+I + +G + V +++ + +SG
Sbjct: 777 AYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMI-NIYGEQGWIDEVADVLKELKESGLG 835
Query: 454 LDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKEL 501
D YN L+ Y G E A+ V +M ++ + +K TY V L
Sbjct: 836 PDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++ N +L V +A ++ + +V DV +Y T+I + K +
Sbjct: 697 PNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV--DVISYNTIIAAYGKNKDYTNMSS 754
Query: 199 VFDEMRCEPNAIT---YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
M+ + +++ YNT++ K +M+ + R +S S PD T+ +I+ Y
Sbjct: 755 AIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSG-PDHYTYNIMINIY 813
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
++G + E + +KE++E G P++ +YN LI+ + G V+EA ++ +MR + I +
Sbjct: 814 GEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDK 873
Query: 316 ATNTSMLKGFCMVGRSEEAIK---HMKEM 341
T T+++ EAIK MK+M
Sbjct: 874 VTYTNLVTALRRNDEFLEAIKWSLWMKQM 902
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 148/330 (44%), Gaps = 15/330 (4%)
Query: 110 LASKFINAFGDRGDIRGAIHWFHKAKASGPCA--LSCNAVLGVLVRANRVNLAKAIYDQV 167
+ S I+ + G+ A + K+SG + + V+ + V+A + A ++ + +
Sbjct: 560 ITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIM 619
Query: 168 VKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKG- 223
++ + PDV+ + M+R + K + + + ++ +R N YN +I+ C +
Sbjct: 620 DEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVIN-CCARAL 678
Query: 224 ---EMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNV 280
E+ G R+ + P+ VTF L+D Y K ++ + +N + + ++ +V
Sbjct: 679 PLDELSGTFEEMIRYGFT----PNTVTFNVLLDVYGK-AKLFKKVNELFLLAKRHGVVDV 733
Query: 281 VTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKE 340
++YN +I + + + M+ G ++ ++L + + E+ +K
Sbjct: 734 ISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKR 793
Query: 341 MVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERK 400
M D Y++++N Y + G E +L+E+ + P + S+N + +
Sbjct: 794 MKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGM 853
Query: 401 LEEAVLLLKNMPRMGCSPNFLSYSIVICGL 430
+EEAV L+K M P+ ++Y+ ++ L
Sbjct: 854 VEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Query: 180 YTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
Y T++ + K +E R + M+ P+ TYN MI+ ++G +D V
Sbjct: 771 YNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELK 830
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNV 296
ES PD+ ++ TLI Y G V+EA+ +KEM+ + P+ VTY L+ L +
Sbjct: 831 ES-GLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEF 889
Query: 297 DEAKRMMSKMRLKGI 311
EA + M+ GI
Sbjct: 890 LEAIKWSLWMKQMGI 904
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAE-----SKSCRPDVVTFTTLIDGYSKRGEV 261
PN +T+N ++ ++ G ++F + E + DV+++ T+I Y K +
Sbjct: 697 PNTVTFNVLL-------DVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDY 749
Query: 262 QEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSM 321
+ +K MQ G ++ YN L++ +++ + ++ +M+ + T M
Sbjct: 750 TNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIM 809
Query: 322 LKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
+ + G +E +KE+ G+ D+ +Y+ ++ Y G EAV +++EM + +
Sbjct: 810 INIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNI 869
Query: 382 KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMG 415
P ++ + L + EA+ M +MG
Sbjct: 870 IPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 129/265 (48%), Gaps = 44/265 (16%)
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVF 232
+E VF T ++ +C ++ ARK+FDEM E N +T+N M++G K G ++ A +F
Sbjct: 204 LEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP-ERNLVTWNVMLNGYSKAGLIEQAEELF 262
Query: 233 NRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI----- 287
++ E D+V++ T+IDG ++ ++ EAL EM G +P+ V L+
Sbjct: 263 DQITE-----KDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASAR 317
Query: 288 -----EGLCLSGNV----------------------DEAKRMMSKMRLKGIKDNVATNTS 320
+GL L G + ++ K + + +KD++A+ +
Sbjct: 318 SVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFE-ASVKDHIASRNA 376
Query: 321 MLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMV-AK 379
++ GF G E+A +E+ + D D+ +++ +++ Y + P A+ + REM+ +
Sbjct: 377 LIAGFVKNGMVEQA----REVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSS 432
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEA 404
++KP + +VF + + LEE
Sbjct: 433 QVKPDAITMVSVFSAISSLGSLEEG 457
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 137/277 (49%), Gaps = 21/277 (7%)
Query: 146 AVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRC 205
+ LG +N V + I+ +V+K L + + + +++ + K ++ A VF +
Sbjct: 46 SALGSCASSNDVTCGRQIHCRVLKSGL-DSNGYICNSVLNMYAKCRLLADAESVFRD-HA 103
Query: 206 EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL 265
+ ++ ++N M+ G + + A+++F+ E +SC V++TTLI GY++ + EA+
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPE-RSC----VSYTTLIKGYAQNNQWSEAM 158
Query: 266 NCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMS---KMRLKGIKDNVATNTSML 322
+EM+ G N VT +I G + + + + S K++L+G V +T++L
Sbjct: 159 ELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEG---RVFVSTNLL 215
Query: 323 KGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMK 382
+C+ ++A K EM R ++ ++V++N Y K G +A + ++ K
Sbjct: 216 HMYCLCLCLKDARKLFDEMPER----NLVTWNVMLNGYSKAGLIEQAEELFDQITEK--- 268
Query: 383 PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPN 419
+ S+ + + + +L+EA++ M R G P+
Sbjct: 269 -DIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPS 304
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAM 229
EA V+ + + +I GF K GMVE AR+VFD+ + + ++N MI G + A+
Sbjct: 364 EASVKDHIASRNALIAGFVKNGMVEQAREVFDQTH-DKDIFSWNAMISGYAQSLSPQLAL 422
Query: 230 RVFNRFAESKSCRPDVVT-------------------------FTT----------LIDG 254
+F S +PD +T F+T +ID
Sbjct: 423 HLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDM 482
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
Y+K G ++ ALN + + + +NA+I G G+ A + S ++ IK N
Sbjct: 483 YAKCGSIETALNIFHQTKNIS-SSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPN 541
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVS-RGMDLDVKAYSVIVNEYCKIGKPSEAVSIL 373
T +L C G E + + M S G++ D+K Y +V+ K G+ EA ++
Sbjct: 542 SITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMI 601
Query: 374 REMVAK 379
++M K
Sbjct: 602 KKMPVK 607
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 118/280 (42%), Gaps = 41/280 (14%)
Query: 98 SLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRV 157
++++R DFL + I+ + DI+ A+ F +A A S NA++ V+ V
Sbjct: 330 TIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQF-EASVKDHIA-SRNALIAGFVKNGMV 387
Query: 158 NLAKAIYDQ-------------------------------VVKEALVEPDVFTYTTMIRG 186
A+ ++DQ ++ + V+PD T ++
Sbjct: 388 EQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSA 447
Query: 187 FCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRP 243
+G +E ++ D + PN +I K G ++ A+ +F+ ++K+
Sbjct: 448 ISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFH---QTKNISS 504
Query: 244 DVVT-FTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRM 302
++ + +I G + G + AL+ ++Q +PN +T+ ++ C +G V+ K
Sbjct: 505 STISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTY 564
Query: 303 MSKMRL-KGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEM 341
M+ GI+ ++ M+ GR EEA + +K+M
Sbjct: 565 FESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKM 604
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 149/382 (39%), Gaps = 96/382 (25%)
Query: 143 SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDE 202
S N ++ VR+ R+ A ++D + E +YTT+I+G+ + A ++F E
Sbjct: 109 SFNIMVDGYVRSRRLWDALKLFD-----VMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 203 MR---CEPNAITYNT---------------MIHGLCKKGEMDG----------------- 227
MR N +T T M+ L K +++G
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 228 ---AMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
A ++F+ E ++VT+ +++GYSK G +++A +E+ +Q + ++V++
Sbjct: 224 LKDARKLFDEMPER-----NLVTWNVMLNGYSKAGLIEQA----EELFDQITEKDIVSWG 274
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
+I+G +DEA ++M G+K + +L S + ++ +V R
Sbjct: 275 TMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKR 334
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA 404
G D + I++ Y V+ +K ++ F A + +A R
Sbjct: 335 GFDCYDFLQATIIHFYA---------------VSNDIKLALQQFEASVKDHIASR----- 374
Query: 405 VLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLG 464
+ +I G K G ++ E+ H+ D +N ++
Sbjct: 375 -------------------NALIAGFVK-NGMVEQAREV----FDQTHDKDIFSWNAMIS 410
Query: 465 GYCEDGDEEMALKTVYDMIDKS 486
GY + ++AL +MI S
Sbjct: 411 GYAQSLSPQLALHLFREMISSS 432
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 90/190 (47%), Gaps = 8/190 (4%)
Query: 127 AIHWFHKAKASG---PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTM 183
A+H F + +S P A++ +V + + K +D + + + P+ +
Sbjct: 421 ALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHD-YLNFSTIPPNDNLTAAI 479
Query: 184 IRGFCKMGMVESARKVFDEMR-CEPNAIT-YNTMIHGLCKKGEMDGAMRVFNRFAESKSC 241
I + K G +E+A +F + + + I+ +N +I G G A+ +++ +S
Sbjct: 480 IDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDL-QSLPI 538
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQ-EQGCQPNVVTYNALIEGLCLSGNVDEAK 300
+P+ +TF ++ G V+ + M+ + G +P++ Y +++ L +G ++EAK
Sbjct: 539 KPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAK 598
Query: 301 RMMSKMRLKG 310
M+ KM +K
Sbjct: 599 EMIKKMPVKA 608
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 13/254 (5%)
Query: 147 VLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKM---GMVESARKVFDEM 203
L +L R + A A+ +V K+ P++ ++ +M CK+ G E + F +M
Sbjct: 109 TLHILARMRYFDQAWALMAEVRKDY---PNLLSFKSMSILLCKIAKFGSYEETLEAFVKM 165
Query: 204 -----RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
R + +N ++ C + EM A +F + PDV T L+ G+ +
Sbjct: 166 EKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKL--HSRFNPDVKTMNILLLGFKEA 223
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
G+V EM ++G +PN VTY I+G C N EA R+ M V
Sbjct: 224 GDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQIL 283
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
T+++ G + +A + E+ RG+ D AY+ +++ K G S A+ +++EM
Sbjct: 284 TTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEE 343
Query: 379 KRMKPSVSSFNAVF 392
K ++P +F+++F
Sbjct: 344 KGIEPDSVTFHSMF 357
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 175/406 (43%), Gaps = 59/406 (14%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR 204
NA+L + + +V +A+ ++D + DV ++ TMI G+ + G + A +FD M
Sbjct: 156 NALLAMYMNFGKVEMARDVFD-----VMKNRDVISWNTMISGYYRNGYMNDALMMFDWMV 210
Query: 205 CEPNAITYNTMI------------------HGLCKK--------------------GEMD 226
E + + T++ H L ++ G MD
Sbjct: 211 NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMD 270
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
A VF+R R DV+T+T +I+GY++ G+V+ AL + MQ +G +PN VT +L
Sbjct: 271 EARFVFDRME-----RRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASL 325
Query: 287 IEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGM 346
+ + V++ K + + + ++ TS++ + R + + + S
Sbjct: 326 VSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFR----VFSGAS 381
Query: 347 DLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVL 406
+S I+ + S+A+ + + M + ++P++++ N++ A L +A+
Sbjct: 382 KYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMN 441
Query: 407 LLKNMPRMGCSPNFLSYSIVICGLCKVK---GRMQLVEELVSSMLQSGHNLDATMYNCLL 463
+ + + G F+S GL V G ++ ++ + + + + D ++ L+
Sbjct: 442 IHCYLTKTG----FMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALI 497
Query: 464 GGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
GY GD AL+ +M+ N+ T+ + + G V+E
Sbjct: 498 SGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEE 543
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 137/301 (45%), Gaps = 6/301 (1%)
Query: 115 INAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEAL 172
IN + + GD+ A+ + G P A++ +++ V A +VN K ++ V++
Sbjct: 291 INGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQ- 349
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVF 232
V D+ T++I + K V+ +VF + + ++ +I G + + A+ +F
Sbjct: 350 VYSDIIIETSLISMYAKCKRVDLCFRVFSGA-SKYHTGPWSAIIAGCVQNELVSDALGLF 408
Query: 233 NRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCL 292
R + P++ T +L+ Y+ ++++A+N + + G ++ L+
Sbjct: 409 KRM-RREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSK 467
Query: 293 SGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKA 352
G ++ A ++ + ++ K +V +++ G+ M G A++ EMV G+ +
Sbjct: 468 CGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEIT 527
Query: 353 YSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSS-FNAVFRVLVAERKLEEAVLLLKNM 411
++ +N G E +++ R M+ + S+ + + +L +L+EA L+ +
Sbjct: 528 FTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTI 587
Query: 412 P 412
P
Sbjct: 588 P 588
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 122/277 (44%), Gaps = 24/277 (8%)
Query: 164 YDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM-----RCEPNAITYNTMIHG 218
Y + + E + + + +Y +IR + + G+ A VF M +C P+ TY +
Sbjct: 67 YARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKA 126
Query: 219 LCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQP 278
+ M + V R S R V L+ Y G+V+ A + M+ +
Sbjct: 127 AGELKSMKLGLVVHGRILRSWFGRDKYVQ-NALLAMYMNFGKVEMARDVFDVMKNR---- 181
Query: 279 NVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHM 338
+V+++N +I G +G +++A M M + + + AT SML C + E +++
Sbjct: 182 DVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLP-VCGHLKDLEMGRNV 240
Query: 339 KEMVSR---GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM-KPSVSSFNAVFRV 394
++V G ++VK + +VN Y K G+ EA V RM + V ++ +
Sbjct: 241 HKLVEEKRLGDKIEVK--NALVNMYLKCGRMDEA-----RFVFDRMERRDVITWTCMING 293
Query: 395 LVAERKLEEAVLLLKNMPRMGCSPNFLSYS--IVICG 429
+ +E A+ L + M G PN ++ + + +CG
Sbjct: 294 YTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCG 330
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 146/320 (45%), Gaps = 22/320 (6%)
Query: 166 QVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEM 225
Q +K L E +F TT+I + G VE ARKVFDEM +PN + +N +I + ++
Sbjct: 131 QALKHGL-ESHLFVGTTLIGMYGGCGCVEFARKVFDEMH-QPNLVAWNAVITACFRGNDV 188
Query: 226 DGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNA 285
GA +F+ K + ++ ++ GY K GE++ A EM + + V+++
Sbjct: 189 AGAREIFD-----KMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHR----DDVSWST 239
Query: 286 LIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR- 344
+I G+ +G+ +E+ +++ G+ N + T +L C S E K + V +
Sbjct: 240 MIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSA-CSQSGSFEFGKILHGFVEKA 298
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA 404
G V + +++ Y + G A + M KR + S+ ++ L + EEA
Sbjct: 299 GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKR---CIVSWTSMIAGLAMHGQGEEA 355
Query: 405 VLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGH-NLDATMYNCLL 463
V L M G +P+ +S+ I + C G ++ E+ S M + H + Y C++
Sbjct: 356 VRLFNEMTAYGVTPDGISF-ISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMV 414
Query: 464 GGYCEDGDEEMALKTVYDMI 483
Y G L+ YD I
Sbjct: 415 DLYGRSGK----LQKAYDFI 430
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 141/320 (44%), Gaps = 48/320 (15%)
Query: 157 VNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMI 216
V A+ ++D+ + +P++ + +I + V AR++FD+M N ++N M+
Sbjct: 157 VEFARKVFDE-----MHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVR-NHTSWNVML 210
Query: 217 HGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGC 276
G K GE++ A R+F S+ D V+++T+I G + G E+ +E+Q G
Sbjct: 211 AGYIKAGELESAKRIF-----SEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGM 265
Query: 277 QPNVVTYNALIEGLCLSGNVDEAKRM------------------------------MSKM 306
PN V+ ++ SG+ + K + M+++
Sbjct: 266 SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARL 325
Query: 307 RLKGIKDN--VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIG 364
+G+++ + + TSM+ G M G+ EEA++ EM + G+ D ++ +++ G
Sbjct: 326 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 385
Query: 365 KPSEAVSILREMV-AKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSY 423
E EM ++P + + + + KL++A + MP P + +
Sbjct: 386 LIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMP---IPPTAIVW 442
Query: 424 SIVICGLCKVKGRMQLVEEL 443
++ G C G ++L E++
Sbjct: 443 RTLL-GACSSHGNIELAEQV 461
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 140/333 (42%), Gaps = 26/333 (7%)
Query: 108 DFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYD 165
D S I G + +F + + +G P +S VL ++ K ++
Sbjct: 234 DVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHG 293
Query: 166 QVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEM 225
V++A V +I + + G V AR VF+ M+ + +++ +MI GL G+
Sbjct: 294 -FVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQG 352
Query: 226 DGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQE-QGCQPNVVTYN 284
+ A+R+FN + PD ++F +L+ S G ++E + EM+ +P + Y
Sbjct: 353 EEAVRLFNEMT-AYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYG 411
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
+++ SG + +A + +M + A L G C + E + +K+ ++
Sbjct: 412 CMVDLYGRSGKLQKAYDFICQMPIP----PTAIVWRTLLGACSSHGNIELAEQVKQRLNE 467
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPS-----VSSFNAVFRVLVAER 399
+ ++ N Y GK + SI + M+ +R+K + V +++ E+
Sbjct: 468 LDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEK 527
Query: 400 ----------KLEEAVLLLKNMPRMGCSPNFLS 422
KL+E +L LK+ G +P S
Sbjct: 528 KKGIDIEAHEKLKEIILRLKD--EAGYTPEVAS 558
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 125/340 (36%), Gaps = 88/340 (25%)
Query: 206 EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTF----------------- 248
EP+A +NT++ G + E ++ VF PD +F
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 249 ------------------TTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGL 290
TTLI Y G V+ A EM QPN+V +NA+I
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH----QPNLVAWNAVITA- 181
Query: 291 CLSGN-VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLD 349
C GN V A+ + KM ++ N + ML G+ G E A + EM R D
Sbjct: 182 CFRGNDVAGAREIFDKMLVR----NHTSWNVMLAGYIKAGELESAKRIFSEMPHRD---D 234
Query: 350 VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLK 409
V ++IV +A SFN E+ L +
Sbjct: 235 VSWSTMIVG------------------IAHN-----GSFN-------------ESFLYFR 258
Query: 410 NMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCED 469
+ R G SPN +S + V+ C G + + L + ++G++ ++ N L+ Y
Sbjct: 259 ELQRAGMSPNEVSLTGVLSA-CSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRC 317
Query: 470 GDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKE 509
G+ MA M +K + ++ + + L G+ +E
Sbjct: 318 GNVPMARLVFEGMQEKRCIV---SWTSMIAGLAMHGQGEE 354
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 45/232 (19%)
Query: 164 YDQVVKEALVEPDVFTYTTMIRGFCKMGMVESA--------------------------- 196
Y ++V + + E DV T+ +I G+ + G+VE A
Sbjct: 327 YAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAA 386
Query: 197 ----RKVFDEMRC-------EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDV 245
K+ E++C E + + +T++ K G + A +VF+ E D+
Sbjct: 387 RTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK-----DL 441
Query: 246 VTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSK 305
+ + TL+ Y++ G EAL MQ +G PNV+T+N +I L +G VDEAK M +
Sbjct: 442 ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQ 501
Query: 306 MRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIV 357
M+ GI N+ + T+M+ G G SEEAI +++M G L A+S+ V
Sbjct: 502 MQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESG--LRPNAFSITV 551
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 155/331 (46%), Gaps = 54/331 (16%)
Query: 160 AKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMI 216
AK ++D V E D+ + T++ + + G+ A ++F M+ E PN IT+N +I
Sbjct: 429 AKKVFDSTV-----EKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII 483
Query: 217 HGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGC 276
L + G++D A +F + +S P+++++TT+++G + G +EA+ +++MQE G
Sbjct: 484 LSLLRNGQVDEAKDMFLQM-QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGL 542
Query: 277 QPN------------------------------------VVTYNALIEGLCLSGNVDEAK 300
+PN V +L++ G++++A+
Sbjct: 543 RPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAE 602
Query: 301 RMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEY 360
++ + + + +M+ + + G +EAI + + G+ D + +++
Sbjct: 603 KVFGSK----LYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSAC 658
Query: 361 CKIGKPSEAVSILREMVAKR-MKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPN 419
G ++A+ I ++V+KR MKP + + + +L + + E+A+ L++ MP P+
Sbjct: 659 NHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP---FKPD 715
Query: 420 FLSYSIVICGLCKVKGRMQLVEELVSSMLQS 450
++ C + + +LV+ L +L+S
Sbjct: 716 ARMIQSLVAS-CNKQRKTELVDYLSRKLLES 745
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 154/334 (46%), Gaps = 14/334 (4%)
Query: 153 RANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITY 212
R + L K + ++ + E D+ +T++ + K G + A+KVFD E + I +
Sbjct: 387 RTENLKLGKEVQCYCIRHSF-ESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILW 444
Query: 213 NTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQ 272
NT++ + G A+R+F + + P+V+T+ +I + G+V EA + +MQ
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGM-QLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQ 503
Query: 273 EQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSE 332
G PN++++ ++ G+ +G +EA + KM+ G++ N + T L C S
Sbjct: 504 SSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA-CAHLASL 562
Query: 333 EAIKHMKEMVSRGMDLD--VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNA 390
+ + + R + V + +V+ Y K G ++A + + + S NA
Sbjct: 563 HIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS----NA 618
Query: 391 VFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS 450
+ L+EA+ L +++ +G P+ ++ + V+ C G + E+ + ++ S
Sbjct: 619 MISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSA-CNHAGDINQAIEIFTDIV-S 676
Query: 451 GHNLDATM--YNCLLGGYCEDGDEEMALKTVYDM 482
++ + Y ++ G+ E AL+ + +M
Sbjct: 677 KRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM 710
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 156/353 (44%), Gaps = 47/353 (13%)
Query: 159 LAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHG 218
+ ++ VVK L E VF +++ + K G+++ A KVFDE+ + NA+ +N ++ G
Sbjct: 191 FGRGVHGYVVKSGL-EDCVFVASSLADMYGKCGVLDDASKVFDEIP-DRNAVAWNALMVG 248
Query: 219 LCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQE-----ALNCMKEMQ- 272
+ G+ + A+R+F+ + P VT +T + + G V+E A+ + M+
Sbjct: 249 YVQNGKNEEAIRLFSDM-RKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMEL 307
Query: 273 -------------------------EQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR 307
++ + +VVT+N +I G G V++A M MR
Sbjct: 308 DNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMR 367
Query: 308 LKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEM----VSRGMDLDVKAYSVIVNEYCKI 363
L+ +K + T +++ R+E +K KE+ + + D+ S +++ Y K
Sbjct: 368 LEKLKYDCVTLATLMSA---AARTEN-LKLGKEVQCYCIRHSFESDIVLASTVMDMYAKC 423
Query: 364 GKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSY 423
G +A + V K + +N + EA+ L M G PN +++
Sbjct: 424 GSIVDAKKVFDSTVEKDLIL----WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITW 479
Query: 424 SIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMAL 476
+++I L + G++ +++ M SG + + ++ G ++G E A+
Sbjct: 480 NLIILSLLR-NGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAI 531
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 160/372 (43%), Gaps = 52/372 (13%)
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRF 235
+VF++ +I C++G+ E A F EM E N ++ +CK GA++ ++RF
Sbjct: 137 NVFSWAAIIGVKCRIGLCEGALMGFVEM-LENEIFPDNFVVPNVCKAC---GALK-WSRF 191
Query: 236 AES------KSCRPD-VVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
KS D V ++L D Y K G + +A E+ ++ N V +NAL+
Sbjct: 192 GRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMV 247
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
G +G +EA R+ S MR +G++ T ++ L +G EE + + GM+L
Sbjct: 248 GYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMEL 307
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM-KPSVSSFNAVFRVLVAERKLEEAVLL 407
D + ++N YCK+G A EMV RM + V ++N + V + +E+A+ +
Sbjct: 308 DNILGTSLLNFYCKVGLIEYA-----EMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYM 362
Query: 408 LKNMPRMGCSPNFLSYSIVICGLCKVKG------------RMQLVEELV----------- 444
+ M + ++ + ++ + + R ++V
Sbjct: 363 CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAK 422
Query: 445 -SSMLQSGHNLDAT------MYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTF 497
S++ + D+T ++N LL Y E G AL+ Y M + N T+
Sbjct: 423 CGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLI 482
Query: 498 VKELCAKGKVKE 509
+ L G+V E
Sbjct: 483 ILSLLRNGQVDE 494
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 106/516 (20%), Positives = 196/516 (37%), Gaps = 69/516 (13%)
Query: 11 KPSSIVTTITSLLQTPDSEP--------LKKFSCYLTPSLVTQVIKNT-HNPHHALFFFN 61
+ ++ I +L+ P ++ L LT V V+ +T ++ L FF+
Sbjct: 75 QSHQLIDRIFDILRAPSNDGDDRAFYLHLSNLRLRLTEKFVLDVLSHTRYDILCCLKFFD 134
Query: 62 WASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLL---------RRSNKLSDFLAS 112
WA+ QP + H R+ + AI +L L + L R S +L D L
Sbjct: 135 WAAR-QPG---FHHTRATFHAIFKILRGAKLVTLMIDFLDRSVGFESCRHSLRLCDALVV 190
Query: 113 KFINAFGDRGDIRGAIHWFHKAKASGPC--ALSCNAVLGVLVRANRVNLAKAIYDQVVKE 170
+ A R DI A+ F + G + + +L LV + I+DQ+
Sbjct: 191 GY--AVAGRTDI--ALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVR 246
Query: 171 ALVEPDVFTYTTMIRGFCKMGMVESAR--------------------------------- 197
V T++ +++ FCK G ++ A
Sbjct: 247 GFV--CAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQE 304
Query: 198 --KVFDEMRCEPNA---ITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLI 252
K+ DE++ YN I L K G ++ + + + C +V + +++
Sbjct: 305 ATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMV 364
Query: 253 DGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIK 312
K + + + EM +G PN T NA + C +G VDEA + G
Sbjct: 365 FQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFA 424
Query: 313 DNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSI 372
+ ++ C E+A +K + RG L K +S + N C GKP A +
Sbjct: 425 PTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMAREL 484
Query: 373 LREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCK 432
+ + + P + + L K+E+A+++ + + G +F ++ +I G
Sbjct: 485 VIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSIT 544
Query: 433 VKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCE 468
+ R + +L+ M + G+ ++Y ++ CE
Sbjct: 545 LM-RGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCE 579
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 166/412 (40%), Gaps = 67/412 (16%)
Query: 138 GPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVF---TYTTMIRGFCKMGMVE 194
P A+S N ++ L V A YD V+K A+ T++T+ C G +
Sbjct: 424 APTAMSYNYLIHTLCANESVEQA---YD-VLKGAIDRGHFLGGKTFSTLTNALCWKGKPD 479
Query: 195 SARKVF---DEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTL 251
AR++ E P I +I LC G+++ A+ + F +S FT+L
Sbjct: 480 MARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKS-GVDTSFKMFTSL 538
Query: 252 IDGYSK--RGEVQEALNCMKEMQEQGCQP------NVV---------------------- 281
I G RG++ L + MQE+G P NV+
Sbjct: 539 IYGSITLMRGDIAAKL--IIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQL 596
Query: 282 --------TYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEE 333
YN IEG +G A+ + M GI VA+N ML+ + + +
Sbjct: 597 SLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIAD 656
Query: 334 AIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFR 393
A+ ++ +G + Y V++ CK K +A+ L EM + ++PS+ + +
Sbjct: 657 ALHFFHDLREQG-KTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQ 715
Query: 394 VLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG------RMQLVEELVSSM 447
L E K +EAV L+ + G ++++ K KG RM+ +E+ + M
Sbjct: 716 KLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDKIPEM 775
Query: 448 LQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVK 499
G L+G + D E+ LK + ++I+K + + TY ++
Sbjct: 776 KSLGE---------LIGLFSGRIDMEVELKRLDEVIEKCYPLDMYTYNMLLR 818
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 168/432 (38%), Gaps = 58/432 (13%)
Query: 70 PNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLS----DFLASKFINAFGDRGDIR 125
PN+ + S + D L S F A LL + D + +I A G +
Sbjct: 279 PNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLN 338
Query: 126 GAIHWFHKAKASGPCALSC---NAVLGVLVRANRVNLAKAIYDQVVKEALVE---PDVFT 179
+ K C L N+++ L++ N ++ +YD ++ E +V P+ T
Sbjct: 339 NPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLD---GVYD-ILTEMMVRGVSPNKKT 394
Query: 180 YTTMIRGFCKMGMVESARKVF---DEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
+ FCK G V+ A +++ E+ P A++YN +IH LC ++ A V + A
Sbjct: 395 MNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVL-KGA 453
Query: 237 ESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNV 296
+ TF+TL + +G+ A + E+ P + +I LC G V
Sbjct: 454 IDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKV 513
Query: 297 DEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG----------- 345
++A + G+ + TS++ G + R + A K + M +G
Sbjct: 514 EDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNV 573
Query: 346 -------------------------MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKR 380
+ V+AY++ + GKP A + M
Sbjct: 574 IQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDG 633
Query: 381 MKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLC---KVKGRM 437
+ P+V+S + + + K+ +A+ ++ G + L Y ++I GLC K+ M
Sbjct: 634 ITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDAM 692
Query: 438 QLVEELVSSMLQ 449
+EE+ LQ
Sbjct: 693 HFLEEMKGEGLQ 704
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 118/282 (41%), Gaps = 5/282 (1%)
Query: 239 KSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDE 298
+SCR + L+ GY+ G AL M+ +G + Y+ L+ L D
Sbjct: 176 ESCRHSLRLCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDS 235
Query: 299 AKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVN 358
+ ++ ++G V T++ ++K FC G+ +EA +++ ++ ++V+
Sbjct: 236 FDVIFDQISVRGFVCAV-THSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVD 294
Query: 359 EYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEE-AVLLLKNMPRMGCS 417
C K EA +L E+ ++N R L+ L A L K P GC
Sbjct: 295 ALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCE 354
Query: 418 PNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALK 477
Y+ ++ L K + + V ++++ M+ G + + N L +C+ G + AL+
Sbjct: 355 LEVFRYNSMVFQLLK-ENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALE 413
Query: 478 TVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEY--LKRCVD 517
+ F +Y + LCA V++ Y LK +D
Sbjct: 414 LYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAID 455
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 112/254 (44%), Gaps = 12/254 (4%)
Query: 171 ALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGEMDG 227
+L E V Y I G G + AR V+D M + P + M+ K ++
Sbjct: 597 SLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIAD 656
Query: 228 AMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
A+ F+ E + + + +I G K ++ +A++ ++EM+ +G QP++ Y I
Sbjct: 657 ALHFFHDLREQGKTKKRL--YQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNI 714
Query: 288 EGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMD 347
+ LC DEA ++++ R G + +L EA M+ + + +
Sbjct: 715 QKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDKIPE 774
Query: 348 LDVKAYSVIVNEYCKIGKPSEAVSILR--EMVAKRMKPSVSSFNAVFRVLVAERKLEEAV 405
+ K+ ++ + G+ V + R E++ K + ++N + R++V + E+A
Sbjct: 775 M--KSLGELIGLFS--GRIDMEVELKRLDEVIEKCYPLDMYTYNMLLRMIVMNQA-EDAY 829
Query: 406 LLLKNMPRMGCSPN 419
+++ + R G PN
Sbjct: 830 EMVERIARRGYVPN 843
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 175/376 (46%), Gaps = 29/376 (7%)
Query: 117 AFGDRGDIRGAIHWFHKA-KASGP--CALSCNAVLGVLVRANRVNLAKAIYDQVVKEALV 173
+ G++ A+ WF+K + SG S +L V++ ++ L + + QV+ +
Sbjct: 153 GYAQDGNLHEAL-WFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFL 211
Query: 174 EPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFN 233
+V ++I + K G +ESA++ FDEM + I + T+I G K G+M+ A ++F
Sbjct: 212 S-NVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHI-WTTLISGYAKLGDMEAAEKLFC 269
Query: 234 RFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
E + V++T LI GY ++G AL+ ++M G +P T+++ LC S
Sbjct: 270 EMPEK-----NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSC---LCAS 321
Query: 294 GNV---DEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMD--L 348
++ K + M ++ N +S++ + G E + E V R D
Sbjct: 322 ASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEAS-----ERVFRICDDKH 376
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
D ++ +++ + G +A+ +L +M+ R++P+ ++ + +EE +
Sbjct: 377 DCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWF 436
Query: 409 KNMP-RMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
++M + G P+ Y+ +I + GR +EL+ + + D ++N +LG
Sbjct: 437 ESMTVQHGIVPDQEHYACLI----DLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCR 492
Query: 468 EDGDEEMALKTVYDMI 483
G+EE+ K ++I
Sbjct: 493 IHGNEELGKKAADELI 508
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 145/325 (44%), Gaps = 16/325 (4%)
Query: 160 AKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGL 219
K I+ + P+ +I + K G A KVFD+M N ++N M+ G
Sbjct: 65 GKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR-NLYSWNNMVSGY 123
Query: 220 CKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPN 279
K G + A VF+ E DVV++ T++ GY++ G + EAL KE + G + N
Sbjct: 124 VKSGMLVRARVVFDSMPER-----DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFN 178
Query: 280 VVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMK 339
++ L+ S + ++ ++ + G NV + S++ + G+ E A +
Sbjct: 179 EFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 340 EMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAER 399
EM + D+ ++ +++ Y K+G A + EM K + S+ A+ V +
Sbjct: 239 EMTVK----DIHIWTTLISGYAKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQG 290
Query: 400 KLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMY 459
A+ L + M +G P ++S +C + ++ +E+ M+++ +A +
Sbjct: 291 SGNRALDLFRKMIALGVKPEQFTFSSCLCASASI-ASLRHGKEIHGYMIRTNVRPNAIVI 349
Query: 460 NCLLGGYCEDGDEEMALKTVYDMID 484
+ L+ Y + G E A + V+ + D
Sbjct: 350 SSLIDMYSKSGSLE-ASERVFRICD 373
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 106/236 (44%), Gaps = 11/236 (4%)
Query: 110 LASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
+ + I+ + GD+ A F + P +S A++ VR N A ++ +++
Sbjct: 247 IWTTLISGYAKLGDMEAAEKLFCEMPEKNP--VSWTALIAGYVRQGSGNRALDLFRKMIA 304
Query: 170 EALVEPDVFTYTTMIRGFCKMGMVESARKVFDEM---RCEPNAITYNTMIHGLCKKGEMD 226
V+P+ FT+++ + + + +++ M PNAI +++I K G ++
Sbjct: 305 LG-VKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLE 363
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
+ RVF R + K D V + T+I ++ G +AL + +M + QPN T +
Sbjct: 364 ASERVF-RICDDKH---DCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVI 419
Query: 287 IEGLCLSGNVDEAKRMMSKMRLK-GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEM 341
+ SG V+E R M ++ GI + ++ G +E ++ ++EM
Sbjct: 420 LNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEM 475
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 122/263 (46%), Gaps = 9/263 (3%)
Query: 180 YTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFA 236
Y+T+IR + + M A + F++M +A+++N +++ D ++F+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 237 ES-KSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
+ PD +++ LI Y G ++A+ M++MQ +G + + + ++ L G
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 296 VDEAKRMMSKMRLKGIK-DNVATNTSMLKGFCMVGRSEEAIKHM-KEMVSRGMDLDVKAY 353
++ A + ++M KG + DN A N ++ S E +K + +EM S G+ D +Y
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSA---QKESPERVKELIEEMSSMGLKPDTISY 281
Query: 354 SVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPR 413
+ ++ YC+ G EA + + P+ ++F + L R E+ + K
Sbjct: 282 NYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVY 341
Query: 414 MGCSPNFLSYSIVICGLCKVKGR 436
M P+F + ++ GL + K R
Sbjct: 342 MHKIPDFNTLKHLVVGLVENKKR 364
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 35/255 (13%)
Query: 248 FTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR 307
++TLI Y + A+ ++M + G + V++NAL+ S N D+ ++
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLF---- 160
Query: 308 LKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPS 367
+E + +++ D +Y +++ YC G P
Sbjct: 161 ------------------------DEIPQRYNKIIP-----DKISYGILIKSYCDSGTPE 191
Query: 368 EAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVI 427
+A+ I+R+M K M+ + +F + L + +LE A L M + GC + +Y++ I
Sbjct: 192 KAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI 251
Query: 428 CGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSF 487
+ K + V+EL+ M G D YN L+ YCE G + A K + +
Sbjct: 252 --MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNC 309
Query: 488 LFNKDTYCTFVKELC 502
N T+ T + LC
Sbjct: 310 APNAATFRTLIFHLC 324
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 39/221 (17%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASGP--CALSCNAVLGVLVRANRVNLAKAIYDQVVK 169
S I ++G A+ F + G A+S NA+L + + + ++D++ +
Sbjct: 106 STLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQ 165
Query: 170 EA-LVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEM 225
+ PD +Y +I+ +C G E A ++ +M+ E I + T++ L KKGE+
Sbjct: 166 RYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGEL 225
Query: 226 DGAMRVFNRFAE---------------------------------SKSCRPDVVTFTTLI 252
+ A ++N + S +PD +++ L+
Sbjct: 226 EVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLM 285
Query: 253 DGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
Y +RG + EA + ++ C PN T+ LI LC S
Sbjct: 286 TAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYS 326
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 103/230 (44%), Gaps = 8/230 (3%)
Query: 198 KVFDEM-----RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLI 252
++FDE+ + P+ I+Y +I C G + A+ + R + K + FTT++
Sbjct: 158 QLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIM-RQMQGKGMEVTTIAFTTIL 216
Query: 253 DGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIK 312
K+GE++ A N EM ++GC+ + YN I + + K ++ +M G+K
Sbjct: 217 SSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLK 275
Query: 313 DNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSI 372
+ + ++ +C G +EA K + + + + ++ C + +I
Sbjct: 276 PDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAI 335
Query: 373 LREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLS 422
++ V P ++ + LV +K ++A L++ + + P+FL+
Sbjct: 336 FKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTV-KKKFPPSFLN 384
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 131/313 (41%), Gaps = 40/313 (12%)
Query: 183 MIRGFCKMGMVESARKVF---DEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESK 239
+I F K+G ++A VF +E PNA TY + LCK+ MD A V + +S
Sbjct: 237 LIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKS- 295
Query: 240 SCRPDVVTFTTLIDGYSKRGEVQEALNC--MKEMQEQGCQPNVVT--------------- 282
+ +I + K G+ +EA + + + +E+ P V
Sbjct: 296 GVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITF 355
Query: 283 -------------------YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLK 323
++ +I LC NV +AK ++ M KG A ++
Sbjct: 356 AQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVH 415
Query: 324 GFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKP 383
G +EA + +K M SRG+ DV Y+VI++ Y K G EA IL E K K
Sbjct: 416 ACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKL 475
Query: 384 SVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEEL 443
S +++A+ R + +EA+ LL M R G PN Y+ +I C + E L
Sbjct: 476 SPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVL 535
Query: 444 VSSMLQSGHNLDA 456
M Q G +L+A
Sbjct: 536 FEEMKQKGLHLNA 548
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 131/320 (40%), Gaps = 46/320 (14%)
Query: 227 GAMRVFNRFAESKSCRP-DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNA 285
G + E +SC ++ LI + K G+ + A + + +E G PN TY
Sbjct: 212 GLWDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYL 271
Query: 286 LIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEA----------- 334
+E LC +D A + KM G+ +++ FC G++EEA
Sbjct: 272 TLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKE 331
Query: 335 ---------------------IKHMKEMVS--------RGMDLDVKAYSVIVNEYCKIGK 365
I +EM+ RG +K +S +++ C++
Sbjct: 332 KSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRG----IKPFSDVIHSLCRMRN 387
Query: 366 PSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSI 425
+A ++L +M++K P + FN V L+EA +LK M G P+ +Y++
Sbjct: 388 VKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTV 447
Query: 426 VICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDK 485
+I G K G M +E+++ + L Y+ L+ GYC+ + + ALK + +M
Sbjct: 448 IISGYAK-GGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRF 506
Query: 486 SFLFNKDTYCTFVKELCAKG 505
N D Y ++ C K
Sbjct: 507 GVQPNADEYNKLIQSFCLKA 526
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/456 (21%), Positives = 194/456 (42%), Gaps = 57/456 (12%)
Query: 38 LTPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHP---RSCYA--AITDVLLSHSL 92
T + V + N+ P AL F P+ YS ++C A + H L
Sbjct: 106 FTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGL 165
Query: 93 FSTADSLLRRSNKLSD-FLASKFINAFG------------DRGDIRGAIHWFHKAKASGP 139
F +S ++D F+ + +N +G DR +R A+ W
Sbjct: 166 FI-------KSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSW--------- 209
Query: 140 CALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKV 199
N++L + V+ A+A++D+ + E +V ++ MI G+ G+V+ A++V
Sbjct: 210 -----NSLLSAYLEKGLVDEARALFDE-----MEERNVESWNFMISGYAAAGLVKEAKEV 259
Query: 200 FDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRG 259
FD M + +++N M+ G + + VFN+ + + +PD T +++ + G
Sbjct: 260 FDSMPVR-DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLG 318
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
+ + + + G + AL++ G +D+A + K +V+T
Sbjct: 319 SLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATS----KRDVSTWN 374
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA- 378
S++ + G ++A++ EMV G + + +++ +G +A + M +
Sbjct: 375 SIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSV 434
Query: 379 KRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQ 438
R++P++ + + +L K+EEA L+ +P S S + G CK G+++
Sbjct: 435 YRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLES----LLGACKRFGQLE 490
Query: 439 LVEELVSSMLQSGHNL-DATMYNCLLGGYCEDGDEE 473
E + + +L+ NL D++ Y + Y DG E
Sbjct: 491 QAERIANRLLEL--NLRDSSGYAQMSNLYASDGRWE 524
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/279 (18%), Positives = 118/279 (42%), Gaps = 40/279 (14%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKV-- 199
+S NA++ N ++++++ ++ +PD FT +++ +G + V
Sbjct: 269 VSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHV 328
Query: 200 -FDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
D+ E ++ K G++D A+ VF + + DV T+ ++I S
Sbjct: 329 YIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFR-----ATSKRDVSTWNSIISDLSVH 383
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM-RLKGIKDNVAT 317
G ++AL EM +G +PN +T+ ++ G +D+A+++ M + ++ +
Sbjct: 384 GLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEH 443
Query: 318 NTSMLKGFCMVGRSEEA----------------------------IKHMKEMVSRGMDLD 349
M+ +G+ EEA ++ + + +R ++L+
Sbjct: 444 YGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELN 503
Query: 350 VK---AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSV 385
++ Y+ + N Y G+ + + R M A+R+ S+
Sbjct: 504 LRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRSL 542
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 117/236 (49%), Gaps = 11/236 (4%)
Query: 151 LVRANRVN----LAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE 206
++RA+ + L ++I+ V K V+ D ++ + K G ESA+K F+++ +
Sbjct: 323 VIRASMIQGCSQLGQSIHAYVSKTGFVK-DAAIVCALVNMYAKTGDAESAKKAFEDLE-K 380
Query: 207 PNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALN 266
+ I + +I GL G + A+ +F R E + PD +T+ ++ S G V+E
Sbjct: 381 KDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQR 440
Query: 267 CMKEMQE-QGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGF 325
EM++ G +P V Y +++ L +G +EA+R++ M +K NV ++L G
Sbjct: 441 YFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMP---VKPNVNIWGALLNG- 496
Query: 326 CMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRM 381
C + + E ++ MV+ +L Y ++ N Y K G+ ++ I M +KR+
Sbjct: 497 CDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRV 552
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 13/297 (4%)
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRF 235
+V T++I + K G + +AR +FD M E +++N++I G + G+ + A+ +F
Sbjct: 250 NVILATSLIDMYAKCGDLRTARYLFDGMP-ERTLVSWNSIITGYSQNGDAEEALCMFLDM 308
Query: 236 AESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN 295
+ PD VTF ++I +G Q + + + G + AL+ +G+
Sbjct: 309 LD-LGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGD 367
Query: 296 VDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG-MDLDVKAYS 354
+ AK+ + K D +A T ++ G G EA+ + M +G D Y
Sbjct: 368 AESAKKAFEDLEKK---DTIAW-TVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYL 423
Query: 355 VIVNEYCKIGKPSEAVSILREMV-AKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPR 413
++ IG E EM ++P+V + + +L + EEA L+K MP
Sbjct: 424 GVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMP- 482
Query: 414 MGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDG 470
PN + ++ G C + ++L + + SM+ L + +Y L Y + G
Sbjct: 483 --VKPNVNIWGALLNG-CDIHENLELTDR-IRSMVAEPEELGSGIYVLLSNIYAKAG 535
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 133/337 (39%), Gaps = 62/337 (18%)
Query: 196 ARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTF------- 248
AR VF+ + C P+ +N+MI G D A+ +F + K PD TF
Sbjct: 60 ARSVFESIDC-PSVYIWNSMIRGYSNSPNPDKAL-IFYQEMLRKGYSPDYFTFPYVLKAC 117
Query: 249 ----------------------------TTLIDGYSKRGEVQEALNCMKEMQEQGCQPNV 280
T L+ Y GEV L +++ Q NV
Sbjct: 118 SGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP----QWNV 173
Query: 281 VTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAI--KHM 338
V + +LI G + +A +M+ G+K A T M+ GR ++ + K
Sbjct: 174 VAWGSLISGFVNNNRFSDAIEAFREMQSNGVK---ANETIMVDLLVACGRCKDIVTGKWF 230
Query: 339 KEMVSRGMDLD----------VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSF 388
+ +G+ D V + +++ Y K G A + M + ++ S+
Sbjct: 231 HGFL-QGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPER----TLVSW 285
Query: 389 NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
N++ EEA+ + +M +G +P+ +++ VI ++G QL + + + +
Sbjct: 286 NSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRA-SMIQGCSQLGQSIHAYVS 344
Query: 449 QSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDK 485
++G DA + L+ Y + GD E A K D+ K
Sbjct: 345 KTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK 381
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 22/226 (9%)
Query: 164 YDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRC---EPNAITYNTMIHGLC 220
Y + +++ P + YT ++R + G + V ++M+C EP+ + Y ++ G+
Sbjct: 238 YLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVI 297
Query: 221 KKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNV 280
+ A ++F+ PDV T+ I+G K+ +++ AL M M + G +PNV
Sbjct: 298 ADEDYPKADKLFDELLLLGLA-PDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNV 356
Query: 281 VTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGF-------CMVGRSEE 333
VTYN LI+ L +G++ AK + +M G+ N T M+ + C G EE
Sbjct: 357 VTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEE 416
Query: 334 AIKHMKEMVSRGMDLDVKAYSV--IVNEYCKIGKPSEAVSILREMV 377
A M++ VK+ + +++ C+ G +AV +L +V
Sbjct: 417 AF---------NMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 130/311 (41%), Gaps = 4/311 (1%)
Query: 200 FDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRG 259
F CEP Y +I L K +++ V S+ F +I Y G
Sbjct: 63 FQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSG 122
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS-GNVDEAKRMMSKMRLKGIKDNVATN 318
++EA+ ++ C P+ T NAL+ L +++ ++ K G++ +T
Sbjct: 123 RIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTF 182
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPS--EAVSILREM 376
++ C +G + A + ++ M + +D + YS +++ CK S + + L ++
Sbjct: 183 GILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDL 242
Query: 377 VAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGR 436
R P + + V R LV + +E V +L M P+ + Y+IV+ G+ +
Sbjct: 243 RKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDY 302
Query: 437 MQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCT 496
+ ++L +L G D YN + G C+ D E ALK + M N TY
Sbjct: 303 PK-ADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNI 361
Query: 497 FVKELCAKGKV 507
+K L G +
Sbjct: 362 LIKALVKAGDL 372
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 146/368 (39%), Gaps = 68/368 (18%)
Query: 93 FSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGV 150
F T +S+ R I A+G G I AI F K P A + NA+L V
Sbjct: 104 FDTPESIFR-----------DVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLV 152
Query: 151 LVRANRVNLAKAIYDQVVKEALVEP-------DVFTYTTMIRGFCKMGMVESARKV---- 199
LVR R +L ++V E LV+ + T+ +I C++G V+ A ++
Sbjct: 153 LVR-KRQSL------ELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYM 205
Query: 200 ---------------------------FD---------EMRCEPNAITYNTMIHGLCKKG 223
FD + R P Y ++ L + G
Sbjct: 206 SQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGG 265
Query: 224 EMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTY 283
+ V N+ + PD+V +T ++ G + +A E+ G P+V TY
Sbjct: 266 RGKEVVSVLNQM-KCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTY 324
Query: 284 NALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVS 343
N I GLC +++ A +MMS M G + NV T ++K G A KEM +
Sbjct: 325 NVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMET 384
Query: 344 RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEE 403
G++ + + ++++ Y ++ + A +L E + S V L + +++
Sbjct: 385 NGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQ 444
Query: 404 AVLLLKNM 411
AV LL ++
Sbjct: 445 AVELLAHL 452
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 45/273 (16%)
Query: 206 EPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEAL 265
E +A +++I K GE+ A +VF+ E D+V F +I GY+ + EAL
Sbjct: 149 ESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ-----DLVVFNAMISGYANNSQADEAL 203
Query: 266 NCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGF 325
N +K+M+ G +P+V+T+NALI G N ++ ++ M L G K +V + TS++ G
Sbjct: 204 NLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGL 263
Query: 326 CMVGRSEEAIKHMKEMVSRGM----------------------DLDVKAYSVI------- 356
++E+A K+M++ G+ ++ YSV+
Sbjct: 264 VHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHG 323
Query: 357 ------VNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKN 410
++ Y K G SEA+ + R K K + +FN++ ++AV L
Sbjct: 324 FVRSALLDMYGKCGFISEAMILFR----KTPKKTTVTFNSMIFCYANHGLADKAVELFDQ 379
Query: 411 MPRMGCSPNFLSYSIVICGLCKVKGRMQLVEEL 443
M G + L+++ ++ C G L + L
Sbjct: 380 MEATGEKLDHLTFTAILTA-CSHAGLTDLGQNL 411
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 6/149 (4%)
Query: 240 SCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEA 299
S D ++LID YSK GEV A ++ EQ ++V +NA+I G + DEA
Sbjct: 147 SYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ----DLVVFNAMISGYANNSQADEA 202
Query: 300 KRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKE-MVSRGMDLDVKAYSVIVN 358
++ M+L GIK +V T +++ GF + R+EE + + E M G DV +++ I++
Sbjct: 203 LNLVKDMKLLGIKPDVITWNALISGFSHM-RNEEKVSEILELMCLDGYKPDVVSWTSIIS 261
Query: 359 EYCKIGKPSEAVSILREMVAKRMKPSVSS 387
+ +A ++M+ + P+ ++
Sbjct: 262 GLVHNFQNEKAFDAFKQMLTHGLYPNSAT 290
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 121/248 (48%), Gaps = 5/248 (2%)
Query: 143 SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDE 202
+C L L R +++ LA+ + +V+ + V++ T ++ C G + AR++ +E
Sbjct: 176 TCTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEE 235
Query: 203 MR----CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
M + N +T+ +MI G C K + + + E +S D+ ++ LIDG++
Sbjct: 236 MGLVKGVKANIVTFKSMI-GCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSY 294
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATN 318
G+V+EA + M ++ + YN ++ G G V++ + S+M +G+ N T
Sbjct: 295 GKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTY 354
Query: 319 TSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVA 378
++ G C G+ EA+ + E+ ++D + YS + E ++G +++ ++ EM+
Sbjct: 355 WVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIR 414
Query: 379 KRMKPSVS 386
P +
Sbjct: 415 DGFIPGAT 422
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 135/296 (45%), Gaps = 10/296 (3%)
Query: 199 VFDEMRCEPNAIT--YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYS 256
V DE CE + +N+MI G+ + VF + ++ + D T T +
Sbjct: 127 VIDECGCEKKVVGRFFNSMIMVYSDNGKFSEVVEVF-EYMKNNEVKIDEKTCTLHLLNLK 185
Query: 257 KRGEVQEALNCMKEMQEQGCQP-NVVTYNALIEGLCLSGNVDEAKRMMSKMRL-KGIKDN 314
+ +++ A + M E G V + ++ LC +G + A+ ++ +M L KG+K N
Sbjct: 186 RCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKAN 245
Query: 315 VATNTSMLKGFCMVGRS--EEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSI 372
+ T SM+ C V R EE +K M + LD+ +Y V+++ + GK EA +
Sbjct: 246 IVTFKSMIG--CCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERL 303
Query: 373 LREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCK 432
+ M K+++ +N + +E+ + L M G +PN +Y +++ GLCK
Sbjct: 304 VLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCK 363
Query: 433 VKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFL 488
G++ ++ + + +D MY+ L G + +L+ V +MI F+
Sbjct: 364 A-GKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFI 418
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 5/243 (2%)
Query: 271 MQEQGCQPNVVT--YNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMV 328
+ E GC+ VV +N++I +G E + M+ +K + T T L
Sbjct: 128 IDECGCEKKVVGRFFNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRC 187
Query: 329 GRSEEAIKHMKEMVSRGMDL-DVKAYSVIVNEYCKIGKPSEAVSILREM-VAKRMKPSVS 386
+ E A MV G+D+ V + +V+V C G+ + A ++ EM + K +K ++
Sbjct: 188 DQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIV 247
Query: 387 SFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSS 446
+F ++ V EE L+LK M + + SY ++I G G+++ E LV
Sbjct: 248 TFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSY-GKVEEAERLVLM 306
Query: 447 MLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGK 506
M +++ +YN ++ GY G E ++ +M + NKDTY + LC GK
Sbjct: 307 MHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGK 366
Query: 507 VKE 509
V E
Sbjct: 367 VCE 369
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 10/272 (3%)
Query: 167 VVKEALVEPDVFTYTTM--IRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGE 224
V + L +P V+T + I K +SA++ + ++ N ++
Sbjct: 45 VKTQTLPDPSVYTRDIVSNIYNILKYSNWDSAQEQLPHLGVRWDSHIINRVLKA---HPP 101
Query: 225 MDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
M A FN A+ K + D T+TT++D + + G +Q + M+E+G + VTY
Sbjct: 102 MQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYT 161
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
+LI + SG+VD A R+ +MR G + V + T+ +K GR EEA + KEM+
Sbjct: 162 SLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRS 221
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAER-KLEE 403
+ + Y+V++ GK EA+ I +M ++P ++ N +L+A+ K E
Sbjct: 222 RVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACN----ILIAKALKFGE 277
Query: 404 AVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
+ + + M + L Y I + L +K
Sbjct: 278 TSFMTRVLVYMKENGVVLRYPIFVEALETLKA 309
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 120/279 (43%), Gaps = 7/279 (2%)
Query: 68 PNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGA 127
P+P+ Y+ R + I ++L + S + L + + ++ + A
Sbjct: 51 PDPSVYT--RDIVSNIYNILKYSNWDSAQEQLPHLGVRWDSHIINRVLKAHPPMQKAWLF 108
Query: 128 IHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGF 187
+W + K + +L + A R+ +++ ++KE V D TYT++I
Sbjct: 109 FNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVF-HLMKEKGVLIDTVTYTSLIHWV 167
Query: 188 CKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPD 244
G V+ A ++++EMR CEP ++Y + L G ++ A V+ S+ P+
Sbjct: 168 SSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSR-VSPN 226
Query: 245 VVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMS 304
T+T L++ G+ +EAL+ +MQE G QP+ N LI G R++
Sbjct: 227 CHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLV 286
Query: 305 KMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVS 343
M+ G+ L+ G S++ ++ + +S
Sbjct: 287 YMKENGVVLRYPIFVEALETLKAAGESDDLLREVNSHIS 325
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 132/275 (48%), Gaps = 12/275 (4%)
Query: 225 MDGAMRVF---NRFAESKSCRP-DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQ-GCQPN 279
+D ++RVF +F S++ + + + F L+ + +EA EM + G +P+
Sbjct: 132 LDHSLRVFRDLEKFEISRTVKSLNALLFACLV-----AKDYKEAKRVYIEMPKMYGIEPD 186
Query: 280 VVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMK 339
+ TYN +I+ C SG+ + ++++M KGIK N ++ M+ GF +S+E K +
Sbjct: 187 LETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLA 246
Query: 340 EMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAER 399
M RG+++ V Y++ + CK K EA ++L M++ MKP+ +++ + E
Sbjct: 247 MMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNED 306
Query: 400 KLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMY 459
EEA L K M GC P+ Y +I LCK G + L ++ ++
Sbjct: 307 DFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCK-GGDFETALSLCKESMEKNWVPSFSIM 365
Query: 460 NCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTY 494
L+ G +D E A K + + + F N + +
Sbjct: 366 KSLVNGLAKDSKVEEA-KELIGQVKEKFTRNVELW 399
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 116/269 (43%), Gaps = 39/269 (14%)
Query: 143 SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDE 202
S NA+L + A AK +Y ++ K +EPD+ TY MI+ FC+ G S+ + E
Sbjct: 153 SLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAE 212
Query: 203 MR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRG 259
M +PN+ ++ MI G + + D +V + + V T+ I KR
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLA-MMKDRGVNIGVSTYNIRIQSLCKRK 271
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
+ +EA + M G +PN VTY+ LI G C + +EAK++
Sbjct: 272 KSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKL----------------- 314
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
K MV+RG D + Y ++ CK G A+S+ +E + K
Sbjct: 315 ------------------FKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEK 356
Query: 380 RMKPSVSSFNAVFRVLVAERKLEEAVLLL 408
PS S ++ L + K+EEA L+
Sbjct: 357 NWVPSFSIMKSLVNGLAKDSKVEEAKELI 385
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 9/270 (3%)
Query: 241 CRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGN---VD 297
CR D + F+ ++ +++ N + E +P++ + + L +D
Sbjct: 76 CRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIEN--RPDLKSERFAAHAIVLYAQANMLD 133
Query: 298 EAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRS-EEAIKHMKEMVS-RGMDLDVKAYSV 355
+ R+ + I V + ++L C+V + +EA + EM G++ D++ Y+
Sbjct: 134 HSLRVFRDLEKFEISRTVKSLNALLFA-CLVAKDYKEAKRVYIEMPKMYGIEPDLETYNR 192
Query: 356 IVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMG 415
++ +C+ G S + SI+ EM K +KP+ SSF + AE K +E +L M G
Sbjct: 193 MIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRG 252
Query: 416 CSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMA 475
+ +Y+I I LCK K + + + L+ ML +G + Y+ L+ G+C + D E A
Sbjct: 253 VNIGVSTYNIRIQSLCKRK-KSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEA 311
Query: 476 LKTVYDMIDKSFLFNKDTYCTFVKELCAKG 505
K M+++ + + Y T + LC G
Sbjct: 312 KKLFKIMVNRGCKPDSECYFTLIYYLCKGG 341
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 143/303 (47%), Gaps = 12/303 (3%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
++ NA L VL R N V ++ D++ K A + D+ TY + R F K M+ K+++
Sbjct: 264 VTYNAALRVLARPNSVAEFWSVVDEM-KTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYE 322
Query: 202 EMR---CEPNAITYNTMIHGLC--KKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYS 256
M +P+ + ++ L ++D RV ++ ES + + +
Sbjct: 323 YMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKY-ESTGKSLSKAVYDGIHRSLT 381
Query: 257 KRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVA 316
G EA K M+ G +P+ +TY+ L+ GLC + ++EA+ ++ +M +G ++
Sbjct: 382 SVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIK 441
Query: 317 TNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREM 376
T T +++G C ++A+ M+ +G D+D V+++ + K A L EM
Sbjct: 442 TWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEM 501
Query: 377 VAK-RMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
V +KP S++ + L+ +K EEA+ LL+ M + N+ +Y+ G G
Sbjct: 502 VKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQ----NYPAYAEAFDGYLAKFG 557
Query: 436 RMQ 438
++
Sbjct: 558 TLE 560
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 100/217 (46%), Gaps = 11/217 (5%)
Query: 277 QPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIK 336
Q + VTYNA + L +V E ++ +M+ G ++ T + + F E +K
Sbjct: 260 QHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVK 319
Query: 337 HMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL------REMVAKRMKPSVSSFNA 390
+ M+ ++ S+++ G P+ + ++ E K + +V ++
Sbjct: 320 LYEYMMDGPFKPSIQDCSLLLRYLS--GSPNPDLDLVFRVSRKYESTGKSLSKAV--YDG 375
Query: 391 VFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQS 450
+ R L + + +EA + K M G P+ ++YS ++ GLCK K R++ ++ M
Sbjct: 376 IHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAK-RLEEARGVLDQMEAQ 434
Query: 451 GHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSF 487
G D + L+ G+C++ + + AL +M++K F
Sbjct: 435 GCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGF 471
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 145/350 (41%), Gaps = 54/350 (15%)
Query: 39 TPSLVTQVIKNTHNPHHALFFFNWASNPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADS 98
+P+ V ++I + +P A F++AS QPN + H RS + + L F+ D
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQ-QPN---FRHSRSSHLILILKLGRGRYFNLIDD 105
Query: 99 LLRRSNK----LSDFLASKFINAFGDRGDIRGAIHWFHKAKASG--PCALSCNAVLGVLV 152
+L + L+ + + I + + + F+K P N +L VLV
Sbjct: 106 VLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV 165
Query: 153 RANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNA 209
G ++ A ++F R PN
Sbjct: 166 -----------------------------------SHRGYLQKAFELFKSSRLHGVMPNT 190
Query: 210 ITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK 269
+YN ++ C ++ A ++F + E + PDV ++ LI G+ ++G+V A+ +
Sbjct: 191 RSYNLLMQAFCLNDDLSIAYQLFGKMLE-RDVVPDVDSYKILIQGFCRKGQVNGAMELLD 249
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVG 329
+M +G P+ LI GLC G DE K+ + +M KG + + + ++KGFC G
Sbjct: 250 DMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFG 305
Query: 330 RSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
+ EEA ++ ++ G L + +++ C + SE + + E K
Sbjct: 306 KVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDE-SEKIKLFLEDAVK 354
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
S RG +Q+A K + G PN +YN L++ CL+ ++ A ++ KM + + +V
Sbjct: 166 SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV 225
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
+ +++GFC G+ A++ + +M+++G D ++ C G E L E
Sbjct: 226 DSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEE 281
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLC 431
M++K P S N + + + K+EEA +++ + + G + + ++ +VI +C
Sbjct: 282 MISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 337
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 383 PSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEE 442
P+ S+N + + L A L M P+ SY I+I G C+ KG++ E
Sbjct: 188 PNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCR-KGQVNGAME 246
Query: 443 LVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELC 502
L+ ML G D T L+GG C+ G + K + +MI K F + VK C
Sbjct: 247 LLDDMLNKGFVPDRT----LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFC 302
Query: 503 AKGKVKE 509
+ GKV+E
Sbjct: 303 SFGKVEE 309
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 102/256 (39%), Gaps = 41/256 (16%)
Query: 248 FTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS-GNVDEAKRMMSKM 306
FT LI Y++ ++ L+ +M E P N +++ L G + +A +
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP 366
RL G+ N + +++ FC+ A + +M+ R + DV +Y +++ +C+ G+
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 367 SEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIV 426
+ A+ LL +M G P+ +
Sbjct: 242 NGAME-----------------------------------LLDDMLNKGFVPD----RTL 262
Query: 427 ICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKS 486
I GLC +G ++ + M+ G + ++ NCL+ G+C G E A V ++
Sbjct: 263 IGGLCD-QGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 321
Query: 487 FLFNKDTYCTFVKELC 502
+ DT+ + +C
Sbjct: 322 ETLHSDTWEMVIPLIC 337
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 138/308 (44%), Gaps = 43/308 (13%)
Query: 176 DVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNR- 234
+V ++ M+ + +E ARK F+++ E NA ++ M+ G + G++ A +F R
Sbjct: 176 NVKAWSVMLGVYVNNRKMEDARKFFEDIP-EKNAFVWSLMMSGYFRIGDVHEARAIFYRV 234
Query: 235 FAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSG 294
FA D+V + TLI GY++ G +A++ MQ +G +P+ VT ++++ SG
Sbjct: 235 FAR------DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSG 288
Query: 295 NVDEAKRMMSKMRLKGIKDN-------------------------------VATNTSMLK 323
+D + + S + +GI+ N VA SM+
Sbjct: 289 RLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMIS 348
Query: 324 GFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKP 383
+ G+ +EA++ M S + D + ++ G E + I EM + +KP
Sbjct: 349 CLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKP 408
Query: 384 SVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEEL 443
+V F + +L KL+EA L+K M PN ++ G CKV ++ E++
Sbjct: 409 NVKHFGCLIHLLGRSGKLKEAYRLVKEMH---VKPNDTVLGALL-GACKVHMDTEMAEQV 464
Query: 444 VSSMLQSG 451
+ + +G
Sbjct: 465 MKIIETAG 472
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 53/328 (16%)
Query: 156 RVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTM 215
RV L K ++ + +K V DV +++I + K G V SARKVFDEM E N T+N M
Sbjct: 61 RVVLGKLLHSESIKFG-VCSDVMVGSSLISMYGKCGCVVSARKVFDEMP-ERNVATWNAM 118
Query: 216 IHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQG 275
I G G+ A+ F E CR + VT+ +I GY KR E+++A + M +
Sbjct: 119 IGGYMSNGD---AVLASGLFEEISVCR-NTVTWIEMIKGYGKRIEIEKARELFERMPFE- 173
Query: 276 CQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAI 335
NV ++ ++ + +++A++ + K N + M+ G+ +G EA
Sbjct: 174 -LKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEK----NAFVWSLMMSGYFRIGDVHEA- 227
Query: 336 KHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVL 395
+ + R D+ ++ ++ Y + G +A+ +A F
Sbjct: 228 ---RAIFYRVFARDLVIWNTLIAGYAQNGYSDDAI------------------DAFF--- 263
Query: 396 VAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLD 455
NM G P+ ++ S ++ C GR+ + E+ S + G L+
Sbjct: 264 --------------NMQGEGYEPDAVTVSSILSA-CAQSGRLDVGREVHSLINHRGIELN 308
Query: 456 ATMYNCLLGGYCEDGDEEMALKTVYDMI 483
+ N L+ Y + GD E A +V++ I
Sbjct: 309 QFVSNALIDMYAKCGDLENA-TSVFESI 335
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 146/351 (41%), Gaps = 42/351 (11%)
Query: 160 AKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGL 219
A+ ++D+ + E +V T+ MI G+ G A +F+E+ N +T+ MI G
Sbjct: 100 ARKVFDE-----MPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGY 154
Query: 220 CKKGEMDGAMRVFNRFA-ESKSCRP---------------------------DVVTFTTL 251
K+ E++ A +F R E K+ + + ++ +
Sbjct: 155 GKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLM 214
Query: 252 IDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGI 311
+ GY + G+V EA + + ++V +N LI G +G D+A M+ +G
Sbjct: 215 MSGYFRIGDVHEARAIFYRVFAR----DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGY 270
Query: 312 KDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVS 371
+ + T +S+L GR + + + RG++L+ + +++ Y K G A S
Sbjct: 271 EPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATS 330
Query: 372 ILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLC 431
+ + + SV+ N++ L K +EA+ + M + P+ +++ I + C
Sbjct: 331 VFESISVR----SVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITF-IAVLTAC 385
Query: 432 KVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDM 482
G + ++ S M + + CL+ G + A + V +M
Sbjct: 386 VHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 5/215 (2%)
Query: 194 ESARKVFDEMR----CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFT 249
+ A +V+ EM EP+ TYN MI LC+ G + + E K +P +F
Sbjct: 163 KEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEM-ERKWIKPTAASFG 221
Query: 250 TLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK 309
+IDG+ K + E M+ M E G V TYN +I+ LC EAK ++ +
Sbjct: 222 LMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSC 281
Query: 310 GIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEA 369
++ N T + ++ GFC +EA+ + MV G D + Y +++ CK G A
Sbjct: 282 RMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETA 341
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA 404
+ + RE + K PS S + L + K++EA
Sbjct: 342 LILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEA 376
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 5/252 (1%)
Query: 143 SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDE 202
S NA+L + A A +Y ++ K +EPD+ TY MIR C+ G S+ + E
Sbjct: 148 SLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAE 207
Query: 203 MR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRG 259
M +P A ++ MI G K+ + D +V R + V T+ +I KR
Sbjct: 208 MERKWIKPTAASFGLMIDGFYKEEKFDEVRKVM-RMMDEFGVHVGVATYNIMIQCLCKRK 266
Query: 260 EVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNT 319
+ EA + + +PN VTY+ LI G C N+DEA + M G K +
Sbjct: 267 KSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYF 326
Query: 320 SMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAK 379
+++ C G E A+ +E + + +VN K EA ++ +V +
Sbjct: 327 TLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELI-AVVKE 385
Query: 380 RMKPSVSSFNAV 391
+ +V +N V
Sbjct: 386 KFTRNVDLWNEV 397
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 86/158 (54%)
Query: 275 GCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEA 334
G +P++ TYN +I LC SG+ + ++++M K IK A+ M+ GF + +E
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 335 IKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRV 394
K M+ M G+ + V Y++++ CK K +EA +++ +++ RM+P+ +++ +
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 395 LVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCK 432
+E L+EA+ L + M G P+ Y +I LCK
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCK 334
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 101/235 (42%), Gaps = 1/235 (0%)
Query: 211 TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKE 270
+ N ++ + A RV+ + PD+ T+ +I + G + + + E
Sbjct: 148 SLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAE 207
Query: 271 MQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGR 330
M+ + +P ++ +I+G DE +++M M G+ VAT M++ C +
Sbjct: 208 MERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKK 267
Query: 331 SEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNA 390
S EA + ++S M + YS++++ +C EA+++ MV KP +
Sbjct: 268 SAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFT 327
Query: 391 VFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVS 445
+ L E A++L + P+F ++ GL + ++ +EL++
Sbjct: 328 LIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLAS-RSKVDEAKELIA 381
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 107/235 (45%), Gaps = 9/235 (3%)
Query: 277 QPNVVTYNALIEGLCLSGNVDEAKRMMSKMR---LKGIKDNVATNTSMLKGFCMVGRSEE 333
QP+ + + + + L G + R + R I V + ++L M +E
Sbjct: 105 QPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKE 164
Query: 334 AIKHMKEMVS-RGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVF 392
A + EM G++ D++ Y+ ++ C+ G S + SI+ EM K +KP+ +SF +
Sbjct: 165 ANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMI 224
Query: 393 RVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGH 452
E K +E +++ M G +Y+I+I LCK K + + L+ ++
Sbjct: 225 DGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAE-AKALIDGVMSCRM 283
Query: 453 NLDATMYNCLLGGYC--EDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKG 505
++ Y+ L+ G+C E+ DE M L V M+ + + + Y T + LC G
Sbjct: 284 RPNSVTYSLLIHGFCSEENLDEAMNLFEV--MVCNGYKPDSECYFTLIHCLCKGG 336
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 118/267 (44%), Gaps = 49/267 (18%)
Query: 157 VNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMI 216
+ + + ++ V K + TT++ + K G + ARKVFDEM E ++T+N MI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMP-ERTSVTWNAMI 185
Query: 217 HGLCK---KGEMDG--AMRVFNRFA----------------------------------- 236
G C KG + AM +F RF+
Sbjct: 186 GGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 237 -ESKSCRPDVVTF--TTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLS 293
E P+V F T L+D YSK G + A + + M+ + NV T+ ++ GL L+
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVK----NVFTWTSMATGLALN 301
Query: 294 GNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR-GMDLDVKA 352
G +E ++++M GIK N T TS+L + +G EE I+ K M +R G+ ++
Sbjct: 302 GRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEH 361
Query: 353 YSVIVNEYCKIGKPSEAVSILREMVAK 379
Y IV+ K G+ EA + M K
Sbjct: 362 YGCIVDLLGKAGRIQEAYQFILAMPIK 388
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 144/343 (41%), Gaps = 57/343 (16%)
Query: 126 GAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIR 185
G + H+ K P + VL R+ K I+ +++ + +V ++++
Sbjct: 250 GLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNG-IGSNVVVESSLLD 308
Query: 186 GFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDV 245
+ K G V AR+VF+ M + N+++++ ++ G C+ GE + A+ +F E D+
Sbjct: 309 MYGKCGSVREARQVFNGM-SKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE-----KDL 362
Query: 246 VTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSK 305
F T++ + V+ + +GC NV+ +ALI+ SG +D A R+ SK
Sbjct: 363 YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSK 422
Query: 306 MRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGK 365
M ++ N+ T +ML GR EEA
Sbjct: 423 MSIR----NMITWNAMLSALAQNGRGEEA------------------------------- 447
Query: 366 PSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA----VLLLKNMPRMGCSPNFL 421
VS +MV K +KP SF A+ ++E VL+ K+ G P
Sbjct: 448 ----VSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKS---YGIKPGTE 500
Query: 422 SYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLG 464
YS +I + GR L EE + + ++ DA+++ LLG
Sbjct: 501 HYSCMI----DLLGRAGLFEEAENLLERAECRNDASLWGVLLG 539
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 115/234 (49%), Gaps = 13/234 (5%)
Query: 157 VNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMI 216
V L K I+ Q V+ +V + +I + K G ++SA +V+ +M N IT+N M+
Sbjct: 378 VRLGKEIHGQYVRRGCF-GNVIVESALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAML 435
Query: 217 HGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQ-G 275
L + G + A+ FN + K +PD ++F ++ G V E N M + G
Sbjct: 436 SALAQNGRGEEAVSFFNDMVK-KGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYG 494
Query: 276 CQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAI 335
+P Y+ +I+ L +G +EA+ ++ + + N A+ +L G C + +A
Sbjct: 495 IKPGTEHYSCMIDLLGRAGLFEEAENLLERAECR----NDASLWGVLLGPCAA--NADAS 548
Query: 336 KHMKEMVSRGMDLDVK---AYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVS 386
+ + + R M+L+ K +Y ++ N Y IG+ +A++I + MV + + +V
Sbjct: 549 RVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVG 602
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 44/278 (15%)
Query: 196 ARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
AR+VFDEM EP+ I + ++ K + A+ +F K PD TF T++
Sbjct: 217 ARRVFDEMP-EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC 275
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
+++ ++ G NVV ++L++ G+V EA+++ + M K N
Sbjct: 276 GNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS----KKNS 331
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEM-------------------------------VSR 344
+ +++L G+C G E+AI+ +EM V R
Sbjct: 332 VSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRR 391
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEA 404
G +V S +++ Y K G A + +M + M ++NA+ L + EEA
Sbjct: 392 GCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNM----ITWNAMLSALAQNGRGEEA 447
Query: 405 VLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEE 442
V +M + G P+++S+ I I C G +V+E
Sbjct: 448 VSFFNDMVKKGIKPDYISF-IAILTAC---GHTGMVDE 481
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 128/302 (42%), Gaps = 32/302 (10%)
Query: 230 RVFN-RFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
RVF+ RF + D +++T+++ GY E +AL EM G N T ++ ++
Sbjct: 118 RVFDGRFVK------DAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVK 171
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
G V + + G + N ++++ + + +A + EM +
Sbjct: 172 ACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMP----EP 227
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREM-VAKRMKPSVSSFNAVFRVLVAERKLEEAVLL 407
DV ++ +++ + K EA+ + M K + P S+F V R+L++ +
Sbjct: 228 DVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEI 287
Query: 408 LKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYC 467
+ G N +V L + G+ V E + ++ ++ LLGGYC
Sbjct: 288 HGKLITNGIGSNV----VVESSLLDMYGKCGSVRE-ARQVFNGMSKKNSVSWSALLGGYC 342
Query: 468 EDGDEEMALKTVYDMIDKSFLFNKDTYC-TFVKELCAK------GK-VKEEYLKR-CVDN 518
++G+ E A++ +M + KD YC V + CA GK + +Y++R C N
Sbjct: 343 QNGEHEKAIEIFREMEE------KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGN 396
Query: 519 TL 520
+
Sbjct: 397 VI 398
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 169/366 (46%), Gaps = 51/366 (13%)
Query: 157 VNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMI 216
+ L K ++ Q ++ L+ D+FT T+IR + + ++SA ++FDE + + +TYN +I
Sbjct: 133 LTLVKTLHCQALRFGLLS-DLFTLNTLIRVYSLIAPIDSALQLFDE-NPQRDVVTYNVLI 190
Query: 217 HGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGC 276
GL K E+ A +F +S R D+V++ +LI GY++ +EA+ EM G
Sbjct: 191 DGLVKAREIVRARELF----DSMPLR-DLVSWNSLISGYAQMNHCREAIKLFDEMVALGL 245
Query: 277 QPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLK----------GIKDNVA---------- 316
+P+ V + + SG+ + K + + K G+ D A
Sbjct: 246 KPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAME 305
Query: 317 -----------TNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGK 365
T +M+ G M G E + + ++MVS G+ D + ++ G
Sbjct: 306 IFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGL 365
Query: 366 PSEAVSILREM-----VAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCS-PN 419
EA ++ +M V + MK + + +L +EEA +++ MP+ G +
Sbjct: 366 VDEARNLFDQMRSLYDVNREMK----HYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREK 421
Query: 420 FLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTV 479
L++S ++ G C++ G +++ E+ ++ +++ D +Y ++ Y E +K V
Sbjct: 422 LLAWSGLLGG-CRIHGNIEIAEK-AANRVKALSPEDGGVYKVMVEMYANAERWEEVVK-V 478
Query: 480 YDMIDK 485
++ID+
Sbjct: 479 REIIDR 484
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 134/322 (41%), Gaps = 16/322 (4%)
Query: 65 NPQPNPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLA-SKFINAFGDRGD 123
NPQ + Y+ +++ + LF S L D ++ + I+ +
Sbjct: 178 NPQRDVVTYNVLIDGLVKAREIVRARELFD--------SMPLRDLVSWNSLISGYAQMNH 229
Query: 124 IRGAIHWFHKAKASG--PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYT 181
R AI F + A G P ++ + L ++ KAI+D ++ L D F T
Sbjct: 230 CREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLF-IDSFLAT 288
Query: 182 TMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSC 241
++ + K G +++A ++F E+ + T+N MI GL G + + F + S
Sbjct: 289 GLVDFYAKCGFIDTAMEIF-ELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSS-GI 346
Query: 242 RPDVVTFTTLIDGYSKRGEVQEALNCMKEMQE-QGCQPNVVTYNALIEGLCLSGNVDEAK 300
+PD VTF +++ G S G V EA N +M+ + Y + + L +G ++EA
Sbjct: 347 KPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAA 406
Query: 301 RMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEY 360
M+ +M G S L G C + + E + V D Y V+V Y
Sbjct: 407 EMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMY 466
Query: 361 CKIGKPSEAVSILREMVAKRMK 382
+ E V + RE++ + K
Sbjct: 467 ANAERWEEVVKV-REIIDRDKK 487
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 129/306 (42%), Gaps = 61/306 (19%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR 204
N ++ LV+A + A+ ++D + LV ++ ++I G+ +M A K+FDEM
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLV-----SWNSLISGYAQMNHCREAIKLFDEMV 241
Query: 205 C---EPNAITY---------------NTMIHGLCKK--------------------GEMD 226
+P+ + IH K+ G +D
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFID 301
Query: 227 GAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNAL 286
AM +F ++ + T+ +I G + G + ++ ++M G +P+ VT+ ++
Sbjct: 302 TAMEIFELCSDKT-----LFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISV 356
Query: 287 IEGLCLSGNVDEAKRMMSKMR-LKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG 345
+ G SG VDEA+ + +MR L + + M G EEA + +++M G
Sbjct: 357 LVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDG 416
Query: 346 MDLD-VKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLV-----AER 399
+ + + A+S ++ C+I E + E A R+K V++V+V AER
Sbjct: 417 GNREKLLAWSGLLGG-CRIHGNIE----IAEKAANRVKALSPEDGGVYKVMVEMYANAER 471
Query: 400 KLEEAV 405
EE V
Sbjct: 472 -WEEVV 476
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 157/361 (43%), Gaps = 22/361 (6%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR 204
N ++ + V+ V A+ ++DQ+ + + + MI G+ K G E A K+FD M
Sbjct: 140 NVIMDMYVKHESVESARKVFDQISQRKGSD-----WNVMISGYWKWGNKEEACKLFD-MM 193
Query: 205 CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEA 264
E + +++ MI G K +++ A + F+R E VV++ ++ GY++ G ++A
Sbjct: 194 PENDVVSWTVMITGFAKVKDLENARKYFDRMPEKS-----VVSWNAMLSGYAQNGFTEDA 248
Query: 265 LNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKG 324
L +M G +PN T+ +I + + ++ + K ++ N T++L
Sbjct: 249 LRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDM 308
Query: 325 FCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPS 384
+ A + E+ G ++ ++ +++ Y +IG S A R++ K +
Sbjct: 309 HAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSA----RQLFDTMPKRN 361
Query: 385 VSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELV 444
V S+N++ + A+ ++M G S I + C ++L + +V
Sbjct: 362 VVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIV 421
Query: 445 SSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAK 504
+ ++ L+ + Y L+ Y G+ A + +M ++ + +Y T A
Sbjct: 422 DYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVV----SYNTLFTAFAAN 477
Query: 505 G 505
G
Sbjct: 478 G 478
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 156/356 (43%), Gaps = 62/356 (17%)
Query: 167 VVKEALVEP-----DVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCK 221
++ +ALVE D + ++ + K VESARKVFD++ + +N MI G K
Sbjct: 121 ILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQI-SQRKGSDWNVMISGYWK 179
Query: 222 KGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVV 281
G + A ++F+ E+ DVV++T +I G++K +++ A M E+ +VV
Sbjct: 180 WGNKEEACKLFDMMPEN-----DVVSWTVMITGFAKVKDLENARKYFDRMPEK----SVV 230
Query: 282 TYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEM 341
++NA++ G +G ++A R+ + M G++ N T
Sbjct: 231 SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETT------------------------ 266
Query: 342 VSRGMDLDVKAYSVIVNEYCKI-GKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERK 400
VIV C PS S+++ + KR++ + A+ + R
Sbjct: 267 ------------WVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRD 314
Query: 401 LEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYN 460
++ A + +G N ++++ +I G ++ G M +L +M + + +N
Sbjct: 315 IQSARRIFNE---LGTQRNLVTWNAMISGYTRI-GDMSSARQLFDTMPKR----NVVSWN 366
Query: 461 CLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYCTFVKELCAKGKVKEEYLKRCV 516
L+ GY +G +A++ DMID + +K T + L A G + + L C+
Sbjct: 367 SLIAGYAHNGQAALAIEFFEDMID--YGDSKPDEVTMISVLSACGHMADLELGDCI 420
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 114/228 (50%), Gaps = 10/228 (4%)
Query: 166 QVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEM 225
+++ E V + F T ++ K ++SAR++F+E+ + N +T+N MI G + G+M
Sbjct: 288 KLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDM 347
Query: 226 DGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQG-CQPNVVTYN 284
A ++F+ + +VV++ +LI GY+ G+ A+ ++M + G +P+ VT
Sbjct: 348 SSARQLFDTMP-----KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMI 402
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
+++ +++ ++ +R IK N + S++ + G EA + EM R
Sbjct: 403 SVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER 462
Query: 345 GMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVF 392
DV +Y+ + + G E +++L +M + ++P ++ +V
Sbjct: 463 ----DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVL 506
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 8/169 (4%)
Query: 142 LSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFD 201
+S N+++ + LA ++ ++ +PD T +++ M +E + D
Sbjct: 363 VSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVD 422
Query: 202 EMR---CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR 258
+R + N Y ++I + G + A RVF+ E DVV++ TL ++
Sbjct: 423 YIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER-----DVVSYNTLFTAFAAN 477
Query: 259 GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMR 307
G+ E LN + +M+++G +P+ VTY +++ +G + E +R+ +R
Sbjct: 478 GDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR 526
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 127/269 (47%), Gaps = 3/269 (1%)
Query: 210 ITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMK 269
+TY ++++ CK+ + A + N+ E + P +++ +L+ Y+K GE ++ ++
Sbjct: 124 LTYGSLLNCYCKELLTEKAEGLLNKMKEL-NITPSSMSYNSLMTLYTKTGETEKVPAMIQ 182
Query: 270 EMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG-IKDNVATNTSMLKGFCMV 328
E++ + P+ TYN + L + ++ +R++ +M G + + T ++M +
Sbjct: 183 ELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDA 242
Query: 329 GRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSF 388
G S++A K ++E+ + D AY ++ Y ++GK +E I R + K S ++
Sbjct: 243 GLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAY 302
Query: 389 NAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSML 448
+ +VLV L A L K + CS + V+ G +G +Q EL
Sbjct: 303 LNMIQVLVKLNDLPGAETLFKEW-QANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAP 361
Query: 449 QSGHNLDATMYNCLLGGYCEDGDEEMALK 477
+ G L+A + + Y + GD AL+
Sbjct: 362 RRGGKLNAKTWEIFMDYYVKSGDMARALE 390
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 3/200 (1%)
Query: 168 VKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCE---PNAITYNTMIHGLCKKGE 224
+KE + P +Y +++ + K G E + E++ E P++ TYN + L +
Sbjct: 149 MKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATND 208
Query: 225 MDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYN 284
+ G RV PD T++ + Y G Q+A ++E++ + Q + Y
Sbjct: 209 ISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQ 268
Query: 285 ALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR 344
LI G + E R+ +RL K + +M++ + A KE +
Sbjct: 269 FLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQAN 328
Query: 345 GMDLDVKAYSVIVNEYCKIG 364
D++ +V++ Y + G
Sbjct: 329 CSTYDIRIVNVLIGAYAQEG 348
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 102/244 (41%), Gaps = 6/244 (2%)
Query: 139 PCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARK 198
P ++S N+++ + + A+ Q +K V PD +TY +R + +
Sbjct: 156 PSSMSYNSLMTLYTKTGETEKVPAMI-QELKAENVMPDSYTYNVWMRALAATNDISGVER 214
Query: 199 VFDEM----RCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDG 254
V +EM R P+ TY+ M G A + E K+ + D + LI
Sbjct: 215 VIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQEL-EMKNTQRDFTAYQFLITL 273
Query: 255 YSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDN 314
Y + G++ E + ++ + + V Y +I+ L ++ A+ + + + +
Sbjct: 274 YGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYD 333
Query: 315 VATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILR 374
+ ++ + G ++A + ++ RG L+ K + + ++ Y K G + A+ +
Sbjct: 334 IRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMS 393
Query: 375 EMVA 378
+ V+
Sbjct: 394 KAVS 397
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 168/400 (42%), Gaps = 58/400 (14%)
Query: 109 FLASKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVV 168
+L + I+ F G + +H+ + L N V+ +++A + + + I+ QV+
Sbjct: 93 YLYTAMIDGFVSSGRSADGVSLYHRMIHNS--VLPDNYVITSVLKACDLKVCREIHAQVL 150
Query: 169 KEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITYNTMIHGLCKKGEMDGA 228
K M+ + K G + +A+K+FDEM + + + MI+ + G + A
Sbjct: 151 KLGFGSSRSVGLK-MMEIYGKSGELVNAKKMFDEMP-DRDHVAATVMINCYSECGFIKEA 208
Query: 229 MRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTY----- 283
+ +F D V +T +IDG + E+ +AL +EMQ + N T
Sbjct: 209 LELFQDVK-----IKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLS 263
Query: 284 ------------------------------NALIEGLCLSGNVDEAKRMMSKMRLKGIKD 313
NALI G+++EA+R+ MR KD
Sbjct: 264 ACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMR---DKD 320
Query: 314 NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSIL 373
++ NT M+ G M G S EAI ++MV+RG + ++N G + +
Sbjct: 321 VISYNT-MISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVF 379
Query: 374 REMVAKRM---KPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGL 430
M KR+ +P + + + +L +LEEA ++N+P P+ + ++
Sbjct: 380 NSM--KRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP---IEPDHIMLGTLLSA- 433
Query: 431 CKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDG 470
CK+ G M+L E++ + +S N D+ Y L Y G
Sbjct: 434 CKIHGNMELGEKIAKRLFES-ENPDSGTYVLLSNLYASSG 472
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 133/310 (42%), Gaps = 33/310 (10%)
Query: 199 VFDEMRCEPNAI---TYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGY 255
+ ++R E A+ T++ + L K G+ + A+ +F + + SC D T T +I
Sbjct: 125 LLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIF-KILDKFSCPQDGFTVTAIISAL 183
Query: 256 SKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNV 315
RG V+ AL M ++ + Y +L+ G + NV EA+R++ M+ GI ++
Sbjct: 184 CSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDL 243
Query: 316 ATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILRE 375
S+L C + V+R G EA++I+ E
Sbjct: 244 FCFNSLLTCLC------------ERNVNRNPS----------------GLVPEALNIMLE 275
Query: 376 MVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKG 435
M + +++P+ S+N + L R++ E+ +L+ M R GC P+ SY V+ L + G
Sbjct: 276 MRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVL-YLTG 334
Query: 436 RMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLFNKDTYC 495
R ++V M++ G + Y L+G C AL+ M S Y
Sbjct: 335 RFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYD 394
Query: 496 TFVKELCAKG 505
+ +LC G
Sbjct: 395 LLIPKLCKGG 404
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 143/330 (43%), Gaps = 17/330 (5%)
Query: 130 WFHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCK 189
W K+ S N VL VL + + + KE D T++ + K
Sbjct: 92 WSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRA-MDKQTFSIVAETLVK 150
Query: 190 MGMVESA---RKVFDEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVV 246
+G E A K+ D+ C + T +I LC +G + A+ V + + S ++
Sbjct: 151 VGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGN-ELS 209
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCL-------SGNVDEA 299
+ +L+ G+S + V+EA +++M+ G P++ +N+L+ LC SG V EA
Sbjct: 210 VYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEA 269
Query: 300 KRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNE 359
+M +MR I+ + +L R E+ + +++M G D D +Y +V
Sbjct: 270 LNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRV 329
Query: 360 YCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPN 419
G+ + I+ EM+ + +P + + VL ++ A+ L + M R
Sbjct: 330 LYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGY 389
Query: 420 FLSYSIVICGLCK----VKGRMQLVEELVS 445
Y ++I LCK KGR +L EE +S
Sbjct: 390 GQVYDLLIPKLCKGGNFEKGR-ELWEEALS 418
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 156/384 (40%), Gaps = 58/384 (15%)
Query: 29 EPLKKFSCYLTPSLVTQVI---KNTHNPHHALFFFNWAS---NPQPNPNNYSHPRSCYAA 82
E L + S + +LVTQVI KN +P L FF+W+ + +++ A
Sbjct: 56 ENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAE 115
Query: 83 ITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAIHWFHKAKASGPCAL 142
D H+ S LR+ N+ D
Sbjct: 116 KKD----HTAMQILLSDLRKENRAMD--------------------------------KQ 139
Query: 143 SCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDE 202
+ + V LV+ + A I+ +++ + D FT T +I C G V+ A V
Sbjct: 140 TFSIVAETLVKVGKEEDAIGIF-KILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHH 198
Query: 203 MR--CEPNAIT-YNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKR- 258
+ N ++ Y +++ G + + A RV +S PD+ F +L+ +R
Sbjct: 199 HKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDM-KSAGITPDLFCFNSLLTCLCERN 257
Query: 259 ------GEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIK 312
G V EALN M EM+ QP ++YN L+ L + V E+ +++ +M+ G
Sbjct: 258 VNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCD 317
Query: 313 DNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSI 372
+ + +++ + GR + + + EM+ RG + K Y ++ C + E V+
Sbjct: 318 PDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGV----ERVNF 373
Query: 373 LREMVAKRMKPSVSSFNAVFRVLV 396
++ K + SV + V+ +L+
Sbjct: 374 ALQLFEKMKRSSVGGYGQVYDLLI 397
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 150/343 (43%), Gaps = 21/343 (6%)
Query: 15 IVTTITSLLQTPDSEPLKKFSC---YLTPSLVTQVIKN---THNPHHALFFFNWASNPQP 68
+ T + +PDS + K S LT QV N + P H FF ++ P
Sbjct: 49 VCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLSWRPVHR--FFLYSQTHHP 106
Query: 69 NPNNYSHPRSCYAAITDVLLSHSLFSTADSLLRRSNKLSDFLASKFINAFGDRGDIRGAI 128
+ + S + AI + LF + + ++D + +++ +
Sbjct: 107 DFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDKTFRIVLKTLASARELKKCV 166
Query: 129 HWFHKAKASGPC--ALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRG 186
++FH G + N + L + V AK ++ ++ + ++PD TY TMI+G
Sbjct: 167 NYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKL--KEFIKPDEITYRTMIQG 224
Query: 187 FCKMGMVESARKVFDEMRCEPNAITYNT---MIHGLCKKGEMDGAMRVFNRFAESKSCRP 243
FC +G + A K+++ M E + ++ L KK + D A +VF +
Sbjct: 225 FCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDL 284
Query: 244 DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMM 303
D + +ID K G + A EM+E+G + +T+ +LI GL + V EA +
Sbjct: 285 DGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGL- 343
Query: 304 SKMRLKGIKD-NVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG 345
++G+++ +++ ++KG + R+ EA + ++M+ RG
Sbjct: 344 ----VEGVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRG 382
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 122/285 (42%), Gaps = 28/285 (9%)
Query: 115 INAFGDRGD-IRGAIHWFHKAKASGPCALSCNA-VLGVLVRANRVNLAKAIYDQVVKEAL 172
I F D GD I A W + ++ L++ N+ + A ++ +V +
Sbjct: 222 IQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRG 281
Query: 173 VEPDVFTYTTMIRGFCKMGMVESARKVFDEMR---CEPNAITYNTMIHGLCKKGEMDGAM 229
+ D Y MI CK G ++ ARKVFDEMR + +T+ ++I+GL K
Sbjct: 282 GDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVK------R 335
Query: 230 RVFNRFAESKSCR-PDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIE 288
RV + + PD+ + LI G K EA ++M ++GC+P + TY L++
Sbjct: 336 RVVEAYGLVEGVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQ 395
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDL 348
G + + KG V +T + G G+ E K+++ + RG+++
Sbjct: 396 G------------HLGRRGRKGPDPLVNFDTIFVGGMIKAGKRLETTKYIERTLKRGLEV 443
Query: 349 DVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFR 393
YS ++ Y E V + EM K + S+ +F+
Sbjct: 444 PRFDYSKFLHYYSN----EEGVVMFEEMAKKLREVSLFDLADIFQ 484
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 13/259 (5%)
Query: 208 NAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNC 267
N T N + LCK+ ++ A VF + E +PD +T+ T+I G+ G++ EA
Sbjct: 180 NVETMNRGVETLCKEKLVEEAKFVFIKLKEF--IKPDEITYRTMIQGFCDVGDLIEAAKL 237
Query: 268 MKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKD-NVATNTSMLKGFC 326
M ++G ++ ++E L DEA ++ M K D + M+ C
Sbjct: 238 WNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLC 297
Query: 327 MVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVS 386
GR + A K EM RG+ +D ++ ++ + EA +V P +S
Sbjct: 298 KNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYG----LVEGVENPDIS 353
Query: 387 SFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGR------MQLV 440
++ + + LV ++ EA + + M + GC P +Y +++ G +GR +
Sbjct: 354 IYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGHLGRRGRKGPDPLVNFD 413
Query: 441 EELVSSMLQSGHNLDATMY 459
V M+++G L+ T Y
Sbjct: 414 TIFVGGMIKAGKRLETTKY 432
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 247 TFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKM 306
TF ++ + E+++ +N M G NV T N +E LC V+EAK + K+
Sbjct: 148 TFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKL 207
Query: 307 RLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKP 366
+ + IK + T +M++GFC VG EA K M+ G D+D++A I+ K +
Sbjct: 208 K-EFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQF 266
Query: 367 SEAVSILREMVAKRMKPSVSSFNAVFRVLV----AERKLEEAVLLLKNMPRMGCSPNFLS 422
EA + MV+KR F +RV++ +++ A + M G + L+
Sbjct: 267 DEASKVFYVMVSKRGGDLDGGF---YRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLT 323
Query: 423 YSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDM 482
++ +I GL VK R+ LV + N D ++Y+ L+ G + A + M
Sbjct: 324 WASLIYGLL-VKRRVVEAYGLVEGV----ENPDISIYHGLIKGLVKIKRASEATEVFRKM 378
Query: 483 IDKS 486
I +
Sbjct: 379 IQRG 382
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 164/381 (43%), Gaps = 59/381 (15%)
Query: 141 ALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVF 200
+++ N +L +RA + N A ++ + + +V + ++M+ G+CKMG + AR +F
Sbjct: 177 SVASNVLLSGYLRAGKWNEAVRVF-----QGMAVKEVVSCSSMVHGYCKMGRIVDARSLF 231
Query: 201 DEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAES--------------KSCRP--- 243
D M E N IT+ MI G K G + +F R + K+CR
Sbjct: 232 DRM-TERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVR 290
Query: 244 ------------------DVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNA 285
D+ +L+ YSK G + EA M+ + + V++N+
Sbjct: 291 YREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNS 346
Query: 286 LIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSRG 345
LI GL + EA + KM K ++ + T M+KGF G + ++ M +
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMMPEK- 401
Query: 346 MDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAV 405
D ++ +++ + G EA+ +M+ K + P+ +F++V + L E +
Sbjct: 402 ---DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGL 458
Query: 406 LLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGG 465
+ + +M + + ++ CK G ++ S + + + YN ++ G
Sbjct: 459 QIHGRVVKMNIVNDLSVQNSLVSMYCKC-GNTNDAYKIFSCISEP----NIVSYNTMISG 513
Query: 466 YCEDGDEEMALKTVYDMIDKS 486
Y +G + ALK ++ M++ S
Sbjct: 514 YSYNGFGKKALK-LFSMLESS 533
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 179/427 (41%), Gaps = 84/427 (19%)
Query: 131 FHKAKASGPCALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKM 190
F + + CN+ + R + A+AI+ Q+ ++V ++ MI + +
Sbjct: 40 FLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIV-----SWIAMISAYAEN 94
Query: 191 GMVESARKVFDEM------------------RC-------------EPNAITYNTMIHGL 219
G + A +VFDEM +C E NA++Y TMI G
Sbjct: 95 GKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGF 154
Query: 220 CKKGEMDGAMRVFN----RFAESKSCR------------------------PDVVTFTTL 251
+ G D A ++ +F +S + +VV+ +++
Sbjct: 155 VRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSM 214
Query: 252 IDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKG- 310
+ GY K G + +A + M E+ NV+T+ A+I+G +G ++ + +MR +G
Sbjct: 215 VHGYCKMGRIVDARSLFDRMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD 270
Query: 311 IKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVSR-GMDLDVKAYSVIVNEYCKIGKPSEA 369
+K N T M K R E + +VSR ++ D+ + +++ Y K+G EA
Sbjct: 271 VKVNSNTLAVMFKACRDFVRYREG-SQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEA 329
Query: 370 VSILREMVAKRMKPSVSSFNAVFRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICG 429
++ M + K SV S+N++ LV +++ EA L + MP + +S++ +I G
Sbjct: 330 KAVFGVM---KNKDSV-SWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKG 381
Query: 430 LCKVKGRMQLVEELVSSMLQSGHNLDATMYNCLLGGYCEDGDEEMALKTVYDMIDKSFLF 489
KG + EL M + D + ++ + +G E AL + M+ K
Sbjct: 382 FSG-KGEISKCVELFGMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCP 436
Query: 490 NKDTYCT 496
N T+ +
Sbjct: 437 NSYTFSS 443
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 104/235 (44%), Gaps = 40/235 (17%)
Query: 141 ALSCNAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVF 200
++S N+++ LV+ +++ A ++ E + D+ ++T MI+GF G + ++F
Sbjct: 341 SVSWNSLITGLVQRKQISEAYELF-----EKMPGKDMVSWTDMIKGFSGKGEISKCVELF 395
Query: 201 DEMRCEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTT---------- 250
M E + IT+ MI G + A+ F++ + + C P+ TF++
Sbjct: 396 G-MMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVC-PNSYTFSSVLSATASLAD 453
Query: 251 LIDGYSKRGEVQEALNCMKEMQEQGC----------------------QPNVVTYNALIE 288
LI+G G V + +N + ++ Q +PN+V+YN +I
Sbjct: 454 LIEGLQIHGRVVK-MNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMIS 512
Query: 289 GLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRSEEAIKHMKEMVS 343
G +G +A ++ S + G + N T ++L VG + K+ K M S
Sbjct: 513 GYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKS 567
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/252 (18%), Positives = 119/252 (47%), Gaps = 15/252 (5%)
Query: 145 NAVLGVLVRANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMR 204
N+++ + + + AKA++ + D ++ ++I G + + A ++F++M
Sbjct: 314 NSLMSMYSKLGYMGEAKAVFG-----VMKNKDSVSWNSLITGLVQRKQISEAYELFEKMP 368
Query: 205 CEPNAITYNTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEA 264
+ + +++ MI G KGE+ + +F E D +T+T +I + G +EA
Sbjct: 369 GK-DMVSWTDMIKGFSGKGEISKCVELFGMMPEK-----DNITWTAMISAFVSNGYYEEA 422
Query: 265 LNCMKEMQEQGCQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKG 324
L +M ++ PN T+++++ ++ E ++ ++ I ++++ S++
Sbjct: 423 LCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSM 482
Query: 325 FCMVGRSEEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPS 384
+C G + +A K + S + ++ +Y+ +++ Y G +A+ + + + +P+
Sbjct: 483 YCKCGNTNDAYK----IFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPN 538
Query: 385 VSSFNAVFRVLV 396
+F A+ V
Sbjct: 539 GVTFLALLSACV 550
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 142/324 (43%), Gaps = 14/324 (4%)
Query: 153 RANRVNLAKAIYDQVVKEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRCEPNAITY 212
R + L +++ VVK L E D+F T+I + SARK+FDEM N +T+
Sbjct: 120 RLSNRKLGGSLHCSVVKSGL-EWDLFICNTLIHMYGSFRDQASARKLFDEMP-HKNLVTW 177
Query: 213 NTMIHGLCKKGEMDGAMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQ 272
N+++ K G++ A VF+ +E DVVT++++IDGY KRGE +AL +M
Sbjct: 178 NSILDAYAKSGDVVSARLVFDEMSER-----DVVTWSSMIDGYVKRGEYNKALEIFDQMM 232
Query: 273 EQG-CQPNVVTYNALIEGLCLSGNVDEAKRMMSKMRLKGIKDNVATNTSMLKGFCMVGRS 331
G + N VT ++I G ++ K + + + V TS++ + G
Sbjct: 233 RMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSI 292
Query: 332 EEAIKHMKEMVSRGMDLDVKAYSVIVNEYCKIGKPSEAVSILREMVAKRMKPSVSSFNAV 391
+A + + D ++ I+ G E++ + +M ++ P +F +
Sbjct: 293 GDAWSVFYRASVK--ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCL 350
Query: 392 FRVLVAERKLEEAVLLLKNMPRMGCSPNFLSYSIVICGLCKVKGRMQLVEELVSSMLQSG 451
++EA K++ G P Y+ ++ L + G ++ + +S M
Sbjct: 351 LAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRA-GLVKDAHDFISEMPIKP 409
Query: 452 HNLDATMYNCLLGGYCEDGDEEMA 475
+M LL G G+ E+A
Sbjct: 410 ---TGSMLGALLNGCINHGNLELA 430
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 6/202 (2%)
Query: 112 SKFINAFGDRGDIRGAIHWFHKAKASGPCALSCNAVLGVL---VRANRVNLAKAIYDQVV 168
S I+ + RG+ A+ F + G + ++ V+ +N K ++ ++
Sbjct: 209 SSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYIL 268
Query: 169 KEALVEPDVFTYTTMIRGFCKMGMVESARKVFDEMRC-EPNAITYNTMIHGLCKKGEMDG 227
+ + V T++I + K G + A VF E +A+ +N +I GL G +
Sbjct: 269 -DVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRE 327
Query: 228 AMRVFNRFAESKSCRPDVVTFTTLIDGYSKRGEVQEALNCMKEMQEQGCQPNVVTYNALI 287
++++F++ ESK PD +TF L+ S G V+EA + K ++E G +P Y ++
Sbjct: 328 SLQLFHKMRESK-IDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMV 386
Query: 288 EGLCLSGNVDEAKRMMSKMRLK 309
+ L +G V +A +S+M +K
Sbjct: 387 DVLSRAGLVKDAHDFISEMPIK 408