Miyakogusa Predicted Gene

Lj1g3v1787590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1787590.1 Non Chatacterized Hit- tr|D7STT2|D7STT2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,66.13,5e-19,seg,NULL; UPF0203,Mitochondrial
distribution/morphology family 35/apoptosis; OS09G0361700
PROTEIN,NU,NODE_73080_length_687_cov_38.285297.path1.1
         (86 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33100.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Mitochondr...    90   4e-19

>AT4G33100.1 | Symbols:  | CONTAINS InterPro DOMAIN/s:
          Mitochondrial distribution/morphology family
          35/apoptosis (InterPro:IPR007918); Has 214 Blast hits
          to 214 proteins in 102 species: Archae - 0; Bacteria -
          0; Metazoa - 110; Fungi - 69; Plants - 29; Viruses - 0;
          Other Eukaryotes - 6 (source: NCBI BLink). |
          chr4:15971701-15972342 FORWARD LENGTH=92
          Length = 92

 Score = 89.7 bits (221), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 44/84 (52%), Positives = 58/84 (69%), Gaps = 2/84 (2%)

Query: 5  KKKRAXXXXXXXXXCAILRDAYHNCFNRWYAEKFMKGHCDKLDCVSEWQKYRACLSEHLE 64
          KKK +         CA LR+AYHNCFN+WY+EKF+KG  DK +CV+EW+KYR CLSE+L+
Sbjct: 5  KKKDSTSARSSTSPCADLRNAYHNCFNKWYSEKFVKGQWDKEECVAEWKKYRDCLSENLD 64

Query: 65 DKDLIRLLEAENVVED--KAVDSK 86
           K L R+LE +  +    +A DSK
Sbjct: 65 GKLLTRILEVDGELNPTKQATDSK 88