Miyakogusa Predicted Gene
- Lj1g3v1787470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1787470.1 tr|G7J7N6|G7J7N6_MEDTR ATP-dependent zinc
metalloprotease FtsH OS=Medicago truncatula GN=ftsH PE=3
S,56.34,0.00000000003,AAA,ATPase, AAA-type, conserved site; ATPases
associated with a variety of cellula,AAA+ ATPase domai,CUFF.27867.1
(316 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G26140.1 | Symbols: ftsh4 | FTSH protease 4 | chr2:11131939-1... 318 2e-87
AT5G53170.1 | Symbols: FTSH11 | FTSH protease 11 | chr5:21563023... 221 7e-58
AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH protease 6 | chr5:4... 186 2e-47
AT5G42270.1 | Symbols: VAR1, FTSH5 | FtsH extracellular protease... 184 8e-47
AT1G50250.1 | Symbols: FTSH1 | FTSH protease 1 | chr1:18614398-1... 184 9e-47
AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular protease... 182 3e-46
AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 | chr1:1960214-19... 179 2e-45
AT5G15250.2 | Symbols: FTSH6 | FTSH protease 6 | chr5:4950411-49... 173 2e-43
AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 | chr3:17332999-1... 169 3e-42
AT3G02450.1 | Symbols: | cell division protein ftsH, putative |... 168 5e-42
AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 | chr5:23770080-2... 165 4e-41
AT2G29080.1 | Symbols: ftsh3 | FTSH protease 3 | chr2:12489911-1... 161 7e-40
AT1G07510.1 | Symbols: ftsh10 | FTSH protease 10 | chr1:2305689-... 156 2e-38
AT3G16290.1 | Symbols: EMB2083 | AAA-type ATPase family protein ... 152 4e-37
AT4G23940.1 | Symbols: | FtsH extracellular protease family | c... 147 1e-35
AT5G03340.1 | Symbols: | ATPase, AAA-type, CDC48 protein | chr5... 129 2e-30
AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cy... 129 3e-30
AT3G53230.1 | Symbols: | ATPase, AAA-type, CDC48 protein | chr3... 129 3e-30
AT3G56690.1 | Symbols: CIP111 | Cam interacting protein 111 | ch... 123 2e-28
AT5G19990.1 | Symbols: RPT6A, ATSUG1 | regulatory particle tripl... 118 6e-27
AT1G45000.1 | Symbols: | AAA-type ATPase family protein | chr1:... 118 6e-27
AT5G20000.1 | Symbols: | AAA-type ATPase family protein | chr5:... 118 6e-27
AT5G64580.1 | Symbols: | AAA-type ATPase family protein | chr5:... 116 2e-26
AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPa... 114 8e-26
AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosph... 112 2e-25
AT2G03670.1 | Symbols: CDC48B | cell division cycle 48B | chr2:1... 110 1e-24
AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC... 110 2e-24
AT1G79560.1 | Symbols: EMB156, EMB36, EMB1047, FTSH12 | FTSH pro... 110 2e-24
AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosph... 110 2e-24
AT2G27600.1 | Symbols: SKD1, VPS4, ATSKD1 | AAA-type ATPase fami... 109 2e-24
AT5G08470.1 | Symbols: PEX1 | peroxisome 1 | chr5:2735925-274273... 107 8e-24
AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosph... 107 1e-23
AT1G64110.1 | Symbols: | P-loop containing nucleoside triphosph... 107 1e-23
AT1G64110.3 | Symbols: | P-loop containing nucleoside triphosph... 107 1e-23
AT1G09100.1 | Symbols: RPT5B | 26S proteasome AAA-ATPase subunit... 106 2e-23
AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | regulatory particle trip... 105 4e-23
AT1G02890.1 | Symbols: | AAA-type ATPase family protein | chr1:... 102 3e-22
AT2G20140.1 | Symbols: | AAA-type ATPase family protein | chr2:... 102 3e-22
AT3G01610.1 | Symbols: CDC48C, emb1354 | cell division cycle 48C... 102 5e-22
AT1G02890.2 | Symbols: | AAA-type ATPase family protein | chr1:... 101 6e-22
AT4G29040.1 | Symbols: RPT2a | regulatory particle AAA-ATPase 2A... 101 8e-22
AT3G27120.1 | Symbols: | P-loop containing nucleoside triphosph... 100 9e-22
AT4G02480.1 | Symbols: | AAA-type ATPase family protein | chr4:... 100 1e-21
AT5G58290.1 | Symbols: RPT3 | regulatory particle triple-A ATPas... 100 1e-21
AT3G15120.1 | Symbols: | P-loop containing nucleoside triphosph... 100 2e-21
AT2G45500.2 | Symbols: | AAA-type ATPase family protein | chr2:... 98 6e-21
AT2G45500.1 | Symbols: | AAA-type ATPase family protein | chr2:... 98 6e-21
AT1G53750.1 | Symbols: RPT1A | regulatory particle triple-A 1A |... 98 9e-21
AT1G53780.2 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 97 2e-20
AT1G53780.3 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 97 2e-20
AT1G50140.1 | Symbols: | P-loop containing nucleoside triphosph... 97 2e-20
AT1G53780.1 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 97 2e-20
AT1G50140.2 | Symbols: | P-loop containing nucleoside triphosph... 96 2e-20
AT2G34560.2 | Symbols: | P-loop containing nucleoside triphosph... 95 7e-20
AT2G34560.1 | Symbols: | P-loop containing nucleoside triphosph... 95 7e-20
AT3G19740.1 | Symbols: | P-loop containing nucleoside triphosph... 94 9e-20
AT1G62130.1 | Symbols: | AAA-type ATPase family protein | chr1:... 93 3e-19
AT1G03000.1 | Symbols: PEX6 | peroxin 6 | chr1:688057-692453 REV... 92 4e-19
AT3G04340.1 | Symbols: emb2458 | FtsH extracellular protease fam... 89 3e-18
AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosph... 89 3e-18
AT1G05910.1 | Symbols: | cell division cycle protein 48-related... 88 6e-18
AT4G04910.1 | Symbols: NSF | AAA-type ATPase family protein | ch... 79 6e-15
AT5G53540.1 | Symbols: | P-loop containing nucleoside triphosph... 74 1e-13
AT1G45000.2 | Symbols: | AAA-type ATPase family protein | chr1:... 71 8e-13
AT4G27680.1 | Symbols: | P-loop containing nucleoside triphosph... 69 5e-12
>AT2G26140.1 | Symbols: ftsh4 | FTSH protease 4 |
chr2:11131939-11135126 REVERSE LENGTH=717
Length = 717
Score = 318 bits (816), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/263 (63%), Positives = 200/263 (76%), Gaps = 21/263 (7%)
Query: 1 MKLNEEVQPNVESSTKFSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGP 60
+ L+EEVQP+++SSTKFSDV G+DEAKA+L+EIVHYLRDPK FTRLG K PKG LLVGP
Sbjct: 210 LGLHEEVQPSMDSSTKFSDV-KGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGP 268
Query: 61 PDTGKTMLSKAVAGEVGVPFFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPCXXXXXXX 118
P TGKTML++A+AGE GVPFFSCSGSEF++ F G AR++ DLF+AAKK PC
Sbjct: 269 PGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEI 328
Query: 119 XXXXXXQN------------KLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHY 166
+N ++LVE+DG KQN+GIIV+AATN PES+DKAL+R GRFD +
Sbjct: 329 DAIGGSRNPKDQQYMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRH 388
Query: 167 AFVPKPCVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDG 226
VP P VE RRQILESHMSKVLKA+DVDLMII + T GFSGADLAN+V++A L+AA DG
Sbjct: 389 IVVPNPDVEGRRQILESHMSKVLKAEDVDLMIIARGTPGFSGADLANLVNVAALKAAMDG 448
Query: 227 AKVVTMNYLEFAIRNKIIKDRLM 249
+K VTM+ LEFA KDR+M
Sbjct: 449 SKDVTMSDLEFA------KDRIM 465
>AT5G53170.1 | Symbols: FTSH11 | FTSH protease 11 |
chr5:21563023-21567922 REVERSE LENGTH=806
Length = 806
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 124/266 (46%), Positives = 170/266 (63%), Gaps = 22/266 (8%)
Query: 2 KLNEEVQPNVESSTKFSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPP 61
+LN+E+ P T F DV G D+AK +L+E+V YL++P FTRLG K PKG LL G P
Sbjct: 347 ELNKEITPEKNVKT-FKDV-KGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLTGAP 404
Query: 62 DTGKTMLSKAVAGEVGVPFFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPC-------- 111
TGKT+L+KA+AGE GVPFF +GSEF++ F G AR++ LF AAKK+ PC
Sbjct: 405 GTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEID 464
Query: 112 ---XXXXXXXXXXXXXQNKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAF 168
++LLVE+DG +QN+GIIV+AATN+P+ +D AL R GRFD +
Sbjct: 465 AVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIV 524
Query: 169 VPKPCVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAK 228
VP P V R +ILE ++ ++DVD+ I + T GF+GADLAN+V++A ++AA +GA+
Sbjct: 525 VPSPDVRGREEILELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAE 584
Query: 229 VVTMNYLEFAIRNKIIKDRL-MKDER 253
++ LEFA KDR+ M ER
Sbjct: 585 KLSSEQLEFA------KDRIVMGTER 604
>AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH protease 6 |
chr5:4950411-4952777 REVERSE LENGTH=688
Length = 688
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/252 (43%), Positives = 147/252 (58%), Gaps = 22/252 (8%)
Query: 6 EVQPNVESSTKFSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGK 65
+++PN + F DV G+DEAK +EIV +L+ P+ F+ LG K PKG LL GPP TGK
Sbjct: 214 QMEPN--TGITFEDV-AGVDEAKQDFEEIVEFLKTPEKFSALGAKIPKGVLLTGPPGTGK 270
Query: 66 TMLSKAVAGEVGVPFFSCSGSEFDDKF--AGARKMSDLFAAAKKRPPCXXXXXXXXXXXX 123
T+L+KA+AGE GVPFFS SGSEF + F GA + DLF AK PC
Sbjct: 271 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCIVFIDEIDAVGR 330
Query: 124 XQ---------------NKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAF 168
+ N++L E+DG N G+IVIAATN PE +D AL+R GRFD
Sbjct: 331 MRGTGIGGGNDEREQTLNQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVS 390
Query: 169 VPKPCVEARRQILESHMSKVLKAD-DVDLMIITKKTNGFSGADLANMVHLATLEAATDGA 227
V P + R +IL+ H S+ K D DV L +I +T GFSGADLAN+++ A + A G
Sbjct: 391 VGLPDIRGREEILKVH-SRSKKLDKDVSLSVIAMRTPGFSGADLANLMNEAAILAGRRGK 449
Query: 228 KVVTMNYLEFAI 239
+T+ ++ +I
Sbjct: 450 DKITLTEIDDSI 461
>AT5G42270.1 | Symbols: VAR1, FTSH5 | FtsH extracellular protease
family | chr5:16902659-16905102 FORWARD LENGTH=704
Length = 704
Score = 184 bits (466), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 144/249 (57%), Gaps = 18/249 (7%)
Query: 12 ESSTKFSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKA 71
E+ F DV G D+AK +L+E+V +L++P +T LG K PKG LLVGPP TGKT+L++A
Sbjct: 244 ETGVTFGDVAGA-DQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARA 302
Query: 72 VAGEVGVPFFSCSGSEFDDKF--AGARKMSDLFAAAKKRPPCXXXXXXXXXXXXXQ---- 125
VAGE GVPFFSC+ SEF + F GA ++ DLF AK + PC +
Sbjct: 303 VAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGM 362
Query: 126 -----------NKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCV 174
N+LL E+DG N G+IV+AATN P+ +D AL+R GRFD V +P V
Sbjct: 363 GGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV 422
Query: 175 EARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVVTMNY 234
R QIL+ H DVD + ++T GF+GADL N+++ A + AA K ++ +
Sbjct: 423 AGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDE 482
Query: 235 LEFAIRNKI 243
+ A+ I
Sbjct: 483 ISDALERII 491
>AT1G50250.1 | Symbols: FTSH1 | FTSH protease 1 |
chr1:18614398-18616930 REVERSE LENGTH=716
Length = 716
Score = 184 bits (466), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 145/249 (58%), Gaps = 18/249 (7%)
Query: 12 ESSTKFSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKA 71
E+ F+DV G D+AK +L+E+V +L++P +T LG K PKG LLVGPP TGKT+L++A
Sbjct: 256 ETGVSFADVAGA-DQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARA 314
Query: 72 VAGEVGVPFFSCSGSEFDDKF--AGARKMSDLFAAAKKRPPCXXXXXXXXXXXXXQ---- 125
VAGE GVPFFSC+ SEF + F GA ++ DLF AK + PC +
Sbjct: 315 VAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGM 374
Query: 126 -----------NKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCV 174
N+LL E+DG N G+IV+AATN P+ +D AL+R GRFD V +P V
Sbjct: 375 GGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV 434
Query: 175 EARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVVTMNY 234
R +IL+ H DVD + ++T GF+GADL N+++ A + AA K ++ +
Sbjct: 435 AGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDE 494
Query: 235 LEFAIRNKI 243
+ A+ I
Sbjct: 495 ISDALERII 503
>AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular protease
family | chr2:13174692-13177064 FORWARD LENGTH=695
Length = 695
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 138/235 (58%), Gaps = 20/235 (8%)
Query: 6 EVQPNVESSTKFSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGK 65
+++PN + F DV G+DEAK E+V +L+ P+ FT +G K PKG LL+GPP TGK
Sbjct: 217 QMEPN--TGVTFDDV-AGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGPPGTGK 273
Query: 66 TMLSKAVAGEVGVPFFSCSGSEFDDKF--AGARKMSDLFAAAKKRPPCXXXXXXXXXXXX 123
T+L+KA+AGE GVPFFS SGSEF + F GA ++ DLF AK+ PC
Sbjct: 274 TLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGR 333
Query: 124 XQ---------------NKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAF 168
+ N+LL E+DG + N G+IV+AATN + +D AL+R GRFD
Sbjct: 334 QRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVS 393
Query: 169 VPKPCVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAA 223
V P V+ R IL+ H +DV L II +T GFSGADLAN+++ A + A
Sbjct: 394 VDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAG 448
>AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 |
chr1:1960214-1962525 REVERSE LENGTH=685
Length = 685
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 143/251 (56%), Gaps = 20/251 (7%)
Query: 6 EVQPNVESSTKFSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGK 65
+++PN + F DV G+DEAK E+V +L+ P+ FT +G + PKG LLVGPP TGK
Sbjct: 210 QMEPN--TGVTFDDV-AGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGK 266
Query: 66 TMLSKAVAGEVGVPFFSCSGSEFDDKF--AGARKMSDLFAAAKKRPPCXXXXXXXXXXXX 123
T+L+KA+AGE GVPFFS SGSEF + F GA ++ DLF AK+ PC
Sbjct: 267 TLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGR 326
Query: 124 XQ---------------NKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAF 168
+ N+LL E+DG + N G+IV+AATN + +D AL+R GRFD
Sbjct: 327 QRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVS 386
Query: 169 VPKPCVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAK 228
V P V+ R IL+ H V L +I +T GFSGADLAN+++ A + A G
Sbjct: 387 VDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKT 446
Query: 229 VVTMNYLEFAI 239
++ ++ +I
Sbjct: 447 AISSKEIDDSI 457
>AT5G15250.2 | Symbols: FTSH6 | FTSH protease 6 |
chr5:4950411-4952771 REVERSE LENGTH=709
Length = 709
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/275 (40%), Positives = 147/275 (53%), Gaps = 45/275 (16%)
Query: 6 EVQPNVESSTKFSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGK 65
+++PN + F DV G+DEAK +EIV +L+ P+ F+ LG K PKG LL GPP TGK
Sbjct: 212 QMEPN--TGITFEDV-AGVDEAKQDFEEIVEFLKTPEKFSALGAKIPKGVLLTGPPGTGK 268
Query: 66 TMLSKAVAGEVGVPFFSCSGSEFDDKF--AGARKMSDLFAAAKKRPPCXXXXXXXXXXXX 123
T+L+KA+AGE GVPFFS SGSEF + F GA + DLF AK PC
Sbjct: 269 TLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCIVFIDEIDAVGR 328
Query: 124 XQ---------------NKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAF 168
+ N++L E+DG N G+IVIAATN PE +D AL+R GRFD
Sbjct: 329 MRGTGIGGGNDEREQTLNQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVC 388
Query: 169 -----------------------VPKPCVEARRQILESHMSKVLKAD-DVDLMIITKKTN 204
V P + R +IL+ H S+ K D DV L +I +T
Sbjct: 389 WLILKPNKSNRFGIMSTCFKQVSVGLPDIRGREEILKVH-SRSKKLDKDVSLSVIAMRTP 447
Query: 205 GFSGADLANMVHLATLEAATDGAKVVTMNYLEFAI 239
GFSGADLAN+++ A + A G +T+ ++ +I
Sbjct: 448 GFSGADLANLMNEAAILAGRRGKDKITLTEIDDSI 482
>AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 |
chr3:17332999-17336613 FORWARD LENGTH=802
Length = 802
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 130/227 (57%), Gaps = 21/227 (9%)
Query: 17 FSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEV 76
F+DV G+DEAK +L+EIV +LR+P+ + RLG + P+G LLVG P TGKT+L+KAVAGE
Sbjct: 324 FADV-AGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEA 382
Query: 77 GVPFFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPCXXXXXXXXXXXXXQ--------- 125
VPF SCS SEF + + G A ++ DLFA AKK P +
Sbjct: 383 EVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGSN 442
Query: 126 -------NKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARR 178
N+LL E+DG N +IV+ ATN + +D AL R GRFD V P R
Sbjct: 443 DEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRE 502
Query: 179 QILESHMSK--VLKADDVDLMIITKKTNGFSGADLANMVHLATLEAA 223
IL H+SK + DDV+L I T GF+GADLAN+V+ A L A
Sbjct: 503 SILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAG 549
>AT3G02450.1 | Symbols: | cell division protein ftsH, putative |
chr3:502876-505030 REVERSE LENGTH=622
Length = 622
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 146/260 (56%), Gaps = 23/260 (8%)
Query: 19 DVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGV 78
D + G+D AK +L EIV L+ + +LG + P+G LLVGPP TGKT+L++AVAGE GV
Sbjct: 334 DDVEGVDSAKDELVEIVSCLQGSINYKKLGARLPRGVLLVGPPGTGKTLLARAVAGEAGV 393
Query: 79 PFFSCSGSEFDDKFA--GARKMSDLFAAAKKRPPCXXXXXXXXXXXXXQ----------- 125
PFFS S SEF + F GA ++ DLF AA+K P +
Sbjct: 394 PFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFIDELDAVGGKRGRSFNDERDQT 453
Query: 126 -NKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQILESH 184
N+LL E+DG + + +IVIAATN PE++D AL R GRF V +P E RR+IL H
Sbjct: 454 LNQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGRFSRKVLVAEPDQEGRRKILAIH 513
Query: 185 MSKVLKADDVDLM--IITKKTNGFSGADLANMVHLATLEAATDGAKVVT----MNYLE-- 236
+ V +D L+ ++ T GF GADLAN+V+ A L AA G + V M +E
Sbjct: 514 LRDVPLEEDAFLICDLVASLTPGFVGADLANIVNEAALLAARRGGEAVAREDIMEAIERA 573
Query: 237 -FAIRNKIIKDRLMKDERSE 255
F I +K + R + +E S+
Sbjct: 574 KFGINDKEARPRTLGNELSK 593
>AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 |
chr5:23770080-23773719 REVERSE LENGTH=806
Length = 806
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 131/230 (56%), Gaps = 21/230 (9%)
Query: 14 STKFSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVA 73
+ F+DV G+DEAK +L+EIV +L++P + RLG + P+G LLVG P TGKT+L+KAVA
Sbjct: 325 TITFADV-AGVDEAKEELEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVA 383
Query: 74 GEVGVPFFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPCXXXXXXXXXXXXXQ------ 125
GE VPF SCS SEF + + G A ++ DLFA AKK P +
Sbjct: 384 GESDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRM 443
Query: 126 ----------NKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVE 175
N+LL E+DG + +IV+ ATN + +D AL R GRFD V P
Sbjct: 444 VSNDEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKV 503
Query: 176 ARRQILESHMSK--VLKADDVDLMIITKKTNGFSGADLANMVHLATLEAA 223
R IL+ H+SK + DDV+L I T GF+GADLAN+V+ A L A
Sbjct: 504 GRESILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAALLAG 553
>AT2G29080.1 | Symbols: ftsh3 | FTSH protease 3 |
chr2:12489911-12492999 REVERSE LENGTH=809
Length = 809
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 160/314 (50%), Gaps = 36/314 (11%)
Query: 17 FSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEV 76
F DV G DEAK ++ E VH+L++PK + LG K PKG LLVGPP TGKT+L+KA AGE
Sbjct: 321 FKDV-AGCDEAKQEIMEFVHFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 379
Query: 77 GVPFFSCSGSEFDDKFAGA--RKMSDLFAAAKKRPPC---------------XXXXXXXX 119
GVPF S SGS+F + F G ++ LF A++ P
Sbjct: 380 GVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGND 439
Query: 120 XXXXXQNKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQ 179
N+LLVE+DG G++V+A TN P+ +DKAL+R GRFD + KP ++ R Q
Sbjct: 440 ERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQ 499
Query: 180 ILESHMSKVLKADDVDLMI---ITKKTNGFSGADLANMVHLATLEAATDGAKVVTMNYLE 236
I + ++ K+ K D + T GF+GAD+AN+ + A L AA VTM + E
Sbjct: 500 IFKIYLKKI-KLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFE 558
Query: 237 FAIRNKIIKDRLMKDERSERHNCQSYGYGPGINSHTGASCPSVLTSYMHGYDPSTR---- 292
AI +++I K+ + ++ Y S +V+ ++ +P +
Sbjct: 559 SAI-DRVIGGLEKKNRVISKLERRTVAY--------HESGHAVVGWFLEHAEPLLKVTIV 609
Query: 293 -RGTRPFRFASYKP 305
RGT FA Y P
Sbjct: 610 PRGTAALGFAQYVP 623
>AT1G07510.1 | Symbols: ftsh10 | FTSH protease 10 |
chr1:2305689-2309380 FORWARD LENGTH=813
Length = 813
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 164/322 (50%), Gaps = 37/322 (11%)
Query: 10 NVESSTKFSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLS 69
N ++ F DV G +EAK ++ E VH+L++PK + LG K PKG LLVGPP TGKT+L+
Sbjct: 319 NSKNKIYFKDV-AGCEEAKQEIMEFVHFLQNPKKYEDLGAKIPKGALLVGPPGTGKTLLA 377
Query: 70 KAVAGEVGVPFFSCSGSEFDDKFAGA--RKMSDLFAAAKKRPPCXXXXXXXXXXXXXQ-- 125
KA AGE VPF S SGS+F + F G ++ +LF A++ P +
Sbjct: 378 KATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGR 437
Query: 126 --------------NKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPK 171
N+LLVE+DG G++V+A TN P+ +DKAL+R GRFD + K
Sbjct: 438 GGFSGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDK 497
Query: 172 PCVEARRQILESHMSKVLKAD---DVDLMIITKKTNGFSGADLANMVHLATLEAATDGAK 228
P ++ R QI + ++ K+ K D + T GF+GAD+AN+ + A L AA
Sbjct: 498 PDIKGRDQIFQIYLKKI-KLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGA 556
Query: 229 VVTMNYLEFAIRNKIIKDRLMKDERSERHNCQSYGYGPGINSHTGASCPSVLTSYMHGYD 288
VTM + + AI +++I K+ + ++ Y H S +V ++ +
Sbjct: 557 TVTMAHFDSAI-DRVIGGLEKKNRVISKLERRTVAY------HE--SGHAVAGWFLEHAE 607
Query: 289 PSTR-----RGTRPFRFASYKP 305
P + RGT FA Y P
Sbjct: 608 PLLKVTIVPRGTAALGFAQYVP 629
>AT3G16290.1 | Symbols: EMB2083 | AAA-type ATPase family protein |
chr3:5521187-5524995 REVERSE LENGTH=876
Length = 876
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 139/256 (54%), Gaps = 21/256 (8%)
Query: 15 TKFSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAG 74
KF+DV G+ + + +L+EIV + + + R G K P G LL GPP GKT+L+KAVAG
Sbjct: 407 VKFTDV-AGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAG 465
Query: 75 EVGVPFFSCSGSEFDDKF--AGARKMSDLFAAAKKRPPCXXXXXXXXXXXXXQ------- 125
E GV FFS S S+F + + GA ++ L+ A++ P +
Sbjct: 466 EAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRERGLIKGSG 525
Query: 126 --------NKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEAR 177
N+LLV +DG + +I IA+TN P+ +D AL+R GRFD F+PKP + R
Sbjct: 526 GQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 585
Query: 178 RQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVVTMNYLEF 237
+IL+ H K A+D+D M + T+G GA+LAN+V +A + DG +T + L
Sbjct: 586 MEILQVHARKKPMAEDLDYMAVASMTDGMVGAELANIVEIAAINMMRDGRTELTTDDLLQ 645
Query: 238 AIRNKIIKDRLMKDER 253
A + I++R M D +
Sbjct: 646 AAQ---IEERGMLDRK 658
>AT4G23940.1 | Symbols: | FtsH extracellular protease family |
chr4:12437108-12441841 FORWARD LENGTH=946
Length = 946
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 125/243 (51%), Gaps = 26/243 (10%)
Query: 6 EVQPNVESSTKFSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGK 65
E + + + KF+DV GIDEA +L+E+V YL++P F ++G K P G LL GPP GK
Sbjct: 418 EARVDGSTGVKFADV-AGIDEAVDELQELVKYLKNPDLFDKMGIKPPHGVLLEGPPGCGK 476
Query: 66 TMLSKAVAGEVGVPFFSCSGSEFDDKF--AGARKMSDLFAAAKKRPPC------------ 111
T+++KA+AGE GVPF+ +GSEF + G+ ++ DLF AK P
Sbjct: 477 TLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALAT 536
Query: 112 -----------XXXXXXXXXXXXXQNKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRH 160
N+LL+E+DG G+I + ATN + +D AL+R
Sbjct: 537 RRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRP 596
Query: 161 GRFDHYAFVPKPCVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATL 220
GRFD V P + R IL+ H SKV +D VDL G+SGA LA +V A L
Sbjct: 597 GRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDLSSYASNLPGWSGAKLAQLVQEAAL 656
Query: 221 EAA 223
A
Sbjct: 657 VAV 659
>AT5G03340.1 | Symbols: | ATPase, AAA-type, CDC48 protein |
chr5:810091-813133 REVERSE LENGTH=810
Length = 810
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 118/229 (51%), Gaps = 15/229 (6%)
Query: 19 DVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVG 77
D +GG+ + A+++E+V LR P+ F +G K PKG LL GPP +GKT++++AVA E G
Sbjct: 207 DDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETG 266
Query: 78 VPFFSCSGSEFDDKFAGARK--MSDLFAAAKKRPPCXXXXXXXXXXXXXQNK-------- 127
FF +G E K AG + + F A+K P + K
Sbjct: 267 AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERR 326
Query: 128 ----LLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQILES 183
LL +DG+K +IV+ ATN P SID AL R GRFD + P R ++L
Sbjct: 327 IVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRI 386
Query: 184 HMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVVTM 232
H + A+DVDL I+K T+G+ GADLA + A L+ + V+ +
Sbjct: 387 HTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDL 435
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 121/256 (47%), Gaps = 36/256 (14%)
Query: 21 IGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGVP 79
IGG++ K +L+E V Y + P+ F + G KG L GPP GKT+L+KA+A E
Sbjct: 482 IGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN 541
Query: 80 FFSCSGSEFDDKFAGARK--MSDLFAAAKKRPPCXXXXXXXXXXXXXQ------------ 125
F S G E + G + + ++F A++ PC +
Sbjct: 542 FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAAD 601
Query: 126 ---NKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQILE 182
N+LL E+DG+ + +I ATN P+ ID AL+R GR D ++P P ++R I +
Sbjct: 602 RVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFK 661
Query: 183 SHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVVTMNYLEFAIRNK 242
+ + K A DVD+ + K T GFSGAD+ + A ++AIR
Sbjct: 662 ACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRAC----------------KYAIREN 705
Query: 243 IIKDRLMKDERSERHN 258
I KD +++ER N
Sbjct: 706 IEKD--IENERRRSQN 719
>AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cycle
48 | chr3:3019494-3022832 FORWARD LENGTH=809
Length = 809
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 118/229 (51%), Gaps = 15/229 (6%)
Query: 19 DVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVG 77
D +GG+ + A+++E+V LR P+ F +G K PKG LL GPP +GKT++++AVA E G
Sbjct: 207 DDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETG 266
Query: 78 VPFFSCSGSEFDDKFAGARK--MSDLFAAAKKRPPCXXXXXXXXXXXXXQNK-------- 127
FF +G E K AG + + F A+K P + K
Sbjct: 267 AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERR 326
Query: 128 ----LLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQILES 183
LL +DG+K +IV+ ATN P SID AL R GRFD + P R ++L
Sbjct: 327 IVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRI 386
Query: 184 HMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVVTM 232
H + A+DVDL I+K T+G+ GADLA + A L+ + V+ +
Sbjct: 387 HTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDL 435
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 119/254 (46%), Gaps = 35/254 (13%)
Query: 21 IGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGVP 79
IGG++ K +L+E V Y + P+ F + G KG L GPP GKT+L+KA+A E
Sbjct: 482 IGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN 541
Query: 80 FFSCSGSEFDDKFAGARK--MSDLFAAAKKRPPCXXXXXXXXXXXXXQ------------ 125
F S G E + G + + ++F A++ PC +
Sbjct: 542 FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAA 601
Query: 126 ----NKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQIL 181
N+LL E+DG+ + +I ATN P+ ID AL+R GR D ++P P ++R I
Sbjct: 602 DRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIF 661
Query: 182 ESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVVTMNYLEFAIRN 241
++ + K A DVD+ + K T GFSGAD+ + A ++AIR
Sbjct: 662 KAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRAC----------------KYAIRE 705
Query: 242 KIIKDRLMKDERSE 255
I KD + RSE
Sbjct: 706 NIEKDIEKEKRRSE 719
>AT3G53230.1 | Symbols: | ATPase, AAA-type, CDC48 protein |
chr3:19723416-19726489 FORWARD LENGTH=815
Length = 815
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 119/230 (51%), Gaps = 15/230 (6%)
Query: 19 DVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVG 77
D +GG+ + A+++E+V LR P+ F +G K PKG LL GPP +GKT++++AVA E G
Sbjct: 208 DDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETG 267
Query: 78 VPFFSCSGSEFDDKFAGARK--MSDLFAAAKKRPPCXXXXXXXXXXXXXQNK-------- 127
FF +G E K AG + + F A+K P + K
Sbjct: 268 AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERR 327
Query: 128 ----LLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQILES 183
LL +DG+K +IV+ ATN P SID AL R GRFD + P R ++L
Sbjct: 328 IVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRI 387
Query: 184 HMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVVTMN 233
H + A+DVDL ++K T+G+ GADLA + A L+ + V+ ++
Sbjct: 388 HTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLD 437
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 121/253 (47%), Gaps = 34/253 (13%)
Query: 21 IGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGVP 79
IGG++ K +L+E V Y + P+ F + G KG L GPP GKT+L+KA+A E
Sbjct: 483 IGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN 542
Query: 80 FFSCSGSEFDDKFAGARK--MSDLFAAAKKRPPCXXXXXXXXXXXXXQ------------ 125
F S G E + G + + ++F A++ PC +
Sbjct: 543 FISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAAD 602
Query: 126 ---NKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQILE 182
N+LL E+DG+ + +I ATN P+ ID AL+R GR D ++P P E+R QI +
Sbjct: 603 RVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFK 662
Query: 183 SHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVVTMNYLEFAIRNK 242
S + K A DVDL + K T GFSGAD+ + + ++AIR
Sbjct: 663 SCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSC----------------KYAIREN 706
Query: 243 IIKDRLMKDERSE 255
I KD + +R+E
Sbjct: 707 IEKDIEKERKRAE 719
>AT3G56690.1 | Symbols: CIP111 | Cam interacting protein 111 |
chr3:20993869-20998531 REVERSE LENGTH=1022
Length = 1022
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 121/238 (50%), Gaps = 19/238 (7%)
Query: 21 IGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGVP 79
+GG +E K +L E V + + F R+G + P G L+ GPP KT++++AVA E +
Sbjct: 726 VGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLN 785
Query: 80 FFSCSGSEFDDKFAGA--RKMSDLFAAAKKRPPCXXXXXXXXXXXXXQNK---------- 127
F + G E K+ G + + LFA A+ P + K
Sbjct: 786 FLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKENDGVSVSDR 845
Query: 128 ----LLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQILES 183
LLVE+DG+ Q G+ VIAATN P+ ID AL+R GRFD +V P R IL+
Sbjct: 846 VMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKI 905
Query: 184 HMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKV--VTMNYLEFAI 239
H+ K+ + D+ L + T G++GAD++ + A + A + ++ ++M +L+ AI
Sbjct: 906 HLRKIPCSSDICLKELASITKGYTGADISLICREAAIAALEESLEMEEISMRHLKAAI 963
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 15/209 (7%)
Query: 21 IGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGVPF 80
+GG+ + A L++I+ + LG + KG L+ GPP TGKT L++ A GV F
Sbjct: 387 LGGLSKEYAILRDIIDSSSIKNSLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNF 446
Query: 81 FSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPCXXXXXXXXXXXXXQNK----------- 127
FS +G E ++ G + + ++F +A P + +
Sbjct: 447 FSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPARKEGGEELSQRMVA 506
Query: 128 -LLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQILESHMS 186
LL +DG+ + DG++VIAATN P+SI+ AL R GR D + P R IL +
Sbjct: 507 TLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILR 566
Query: 187 KVLKA-DDVDLMIITKKTNGFSGADLANM 214
+ + ++ + + T+GF GADL+ +
Sbjct: 567 GMRHSLSNIQVEQLAMATHGFVGADLSAL 595
>AT5G19990.1 | Symbols: RPT6A, ATSUG1 | regulatory particle triple-A
ATPase 6A | chr5:6752144-6754918 FORWARD LENGTH=419
Length = 419
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 123/247 (49%), Gaps = 19/247 (7%)
Query: 19 DVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVG 77
D+IGG+D+ ++KE++ ++ P+ F LG PKG LL GPP TGKT+L++AVA
Sbjct: 161 DMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 220
Query: 78 VPFFSCSGSEFDDKF--AGARKMSDLFAAAKKRPPCXXXXXXXXXXXXXQN--------- 126
F SGSE K+ G+R + +LF A++ P +
Sbjct: 221 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS 280
Query: 127 -------KLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQ 179
+LL ++DG + ++ I V+ ATN + +D+AL+R GR D P P E+R
Sbjct: 281 EVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFD 340
Query: 180 ILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVVTMNYLEFAI 239
IL+ H K+ +DL I +K NG SGA+L + A + A + VT E A+
Sbjct: 341 ILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAV 400
Query: 240 RNKIIKD 246
+ KD
Sbjct: 401 AKVMKKD 407
>AT1G45000.1 | Symbols: | AAA-type ATPase family protein |
chr1:17009220-17011607 FORWARD LENGTH=399
Length = 399
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 18/212 (8%)
Query: 21 IGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGVP 79
+GG+ + +L+E + L +P+ F R+G K PKG LL GPP TGKT+L++A+A +
Sbjct: 141 VGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDAN 200
Query: 80 FFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPC---------------XXXXXXXXXXX 122
F S DK+ G AR + ++F A++ PC
Sbjct: 201 FLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 260
Query: 123 XXQNKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQILE 182
+LL ++DG Q + +I ATN P+ +D AL+R GR D +P P ++R +IL+
Sbjct: 261 RTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILK 320
Query: 183 SHMSKVLKADDVDLMIITKKTNGFSGADLANM 214
H S + K ++D I K GF+GADL N+
Sbjct: 321 IHASGIAKHGEIDYEAIVKLGEGFNGADLRNI 352
>AT5G20000.1 | Symbols: | AAA-type ATPase family protein |
chr5:6756915-6759550 FORWARD LENGTH=419
Length = 419
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 123/247 (49%), Gaps = 19/247 (7%)
Query: 19 DVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVG 77
D+IGG+D+ ++KE++ ++ P+ F LG PKG LL GPP TGKT+L++AVA
Sbjct: 161 DMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 220
Query: 78 VPFFSCSGSEFDDKF--AGARKMSDLFAAAKKRPPCXXXXXXXXXXXXXQN--------- 126
F SGSE K+ G+R + +LF A++ P +
Sbjct: 221 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS 280
Query: 127 -------KLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQ 179
+LL ++DG + ++ I V+ ATN + +D+AL+R GR D P P E+R
Sbjct: 281 EVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFD 340
Query: 180 ILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVVTMNYLEFAI 239
IL+ H K+ +DL I +K NG SGA+L + A + A + VT E A+
Sbjct: 341 ILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAV 400
Query: 240 RNKIIKD 246
+ KD
Sbjct: 401 AKVMKKD 407
>AT5G64580.1 | Symbols: | AAA-type ATPase family protein |
chr5:25817391-25821465 REVERSE LENGTH=855
Length = 855
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 120/228 (52%), Gaps = 23/228 (10%)
Query: 19 DVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGV 78
D G + K +L+EIV L++ + F G PKG LL GPP TGKT+L+KA+AGE G+
Sbjct: 316 DDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGL 375
Query: 79 PFFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPCXXXXXXXXXXXXXQN---------- 126
PFF+ +G++F + F G A ++ DLFA+++ P +
Sbjct: 376 PFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDAIGSKRGGPDIGGGGAE 435
Query: 127 ------KLLVEIDGVK-QNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQ 179
++L E+DG K ++VI ATN + +D AL+R GRFD V P + R
Sbjct: 436 REQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRLA 495
Query: 180 ILESHM-SKVLKADDVD---LMIITKKTNGFSGADLANMVHLATLEAA 223
IL+ H +K +++D L + + T F+GA+L N+++ A + A
Sbjct: 496 ILKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLNEAGILTA 543
>AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPase
4A | chr5:17248563-17251014 REVERSE LENGTH=399
Length = 399
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 107/212 (50%), Gaps = 18/212 (8%)
Query: 21 IGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGVP 79
+GG+ + +L+E + L +P+ F R+G K PKG LL GPP TGKT+L++A+A +
Sbjct: 141 VGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDAN 200
Query: 80 FFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPC---------------XXXXXXXXXXX 122
F S DK+ G AR + ++F A++ PC
Sbjct: 201 FLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 260
Query: 123 XXQNKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQILE 182
+LL ++DG + +I ATN P+ +D AL+R GR D +P P ++R IL+
Sbjct: 261 RTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILK 320
Query: 183 SHMSKVLKADDVDLMIITKKTNGFSGADLANM 214
H + + K ++D I K GF+GADL N+
Sbjct: 321 IHAAGIAKHGEIDYEAIVKLAEGFNGADLRNI 352
>AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:13925456-13929280
FORWARD LENGTH=830
Length = 830
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 116/231 (50%), Gaps = 22/231 (9%)
Query: 6 EVQPNVESSTKFSDVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTG 64
EV P E F+D IG +DE K L+E+V LR P F K +G LL GPP TG
Sbjct: 506 EVIPANEIGVTFAD-IGSLDETKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTG 564
Query: 65 KTMLSKAVAGEVGVPFFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPC----------- 111
KTM++KA+A E G F + S S K+ G + + LF A K P
Sbjct: 565 KTMMAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSML 624
Query: 112 --XXXXXXXXXXXXXQNKLLVEIDGVKQNDG--IIVIAATNVPESIDKALMRHGRFDHYA 167
+N+ + DG+ N G I+V+AATN P +D+A++R RF+
Sbjct: 625 GQRTRVGEHEAMRKIKNEFMTHWDGLMSNAGDRILVLAATNRPFDLDEAIIR--RFERRI 682
Query: 168 FVPKPCVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLA 218
V P VE+R +IL + +SK K +++D + + T+G+SG+DL N A
Sbjct: 683 MVGLPSVESREKILRTLLSKE-KTENLDFQELAQMTDGYSGSDLKNFCTTA 732
>AT2G03670.1 | Symbols: CDC48B | cell division cycle 48B |
chr2:1117595-1120361 FORWARD LENGTH=603
Length = 603
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 111/215 (51%), Gaps = 19/215 (8%)
Query: 19 DVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVG 77
D +GG+ + K KL++ V + ++ F ++G +G LL GPP KT L+KA A
Sbjct: 286 DDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQ 345
Query: 78 VPFFSCSGSEFDDKFAGARK--MSDLFAAAKKRPP------------CXXXXXXXXXXXX 123
FFS S +E + G + + + F A+ P C
Sbjct: 346 ASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSST 405
Query: 124 XQNK----LLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQ 179
+ LL E+DG+++ GI+V+AATN P +ID ALMR GRFD +VP P +EAR +
Sbjct: 406 VGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFE 465
Query: 180 ILESHMSKVLKADDVDLMIITKKTNGFSGADLANM 214
IL+ H + DDVDL I ++T+ F+GA+L +
Sbjct: 466 ILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGL 500
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 108/245 (44%), Gaps = 21/245 (8%)
Query: 21 IGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGVP 79
IGG + A L+E++ + R P LG K+P+G LL GPP TGKT L +AV E
Sbjct: 24 IGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAH 83
Query: 80 FFSCSGSEFDDKFAGARK--MSDLFA-----AAKKRPP----------CXXXXXXXXXXX 122
S AG + + + FA A +P C
Sbjct: 84 LIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDARREQDV 143
Query: 123 XXQNKLLVEIDGVKQNDG---IIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQ 179
++L +D K + ++V+A+TN ++ID AL R GRFD V P E R +
Sbjct: 144 RIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLK 203
Query: 180 ILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVVTMNYLEFAI 239
IL+ + KV VDL I NG+ GADL + AT+ A+ + + + +F I
Sbjct: 204 ILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDSLILTSQDFKI 263
Query: 240 RNKII 244
++
Sbjct: 264 AKSVV 268
>AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC2,
BOT1, FTR | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:30205499-30208050
REVERSE LENGTH=523
Length = 523
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 119/226 (52%), Gaps = 27/226 (11%)
Query: 19 DVIGGIDEAKAKLKE-IVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVG 77
D + G+ EAK L+E +V L P++F + R + KG L+ GPP TGKT+L+KAVA E G
Sbjct: 239 DDVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPW-KGVLMFGPPGTGKTLLAKAVATECG 297
Query: 78 VPFFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPP-----------CXXX--XXXXXXXX 122
FF+ S + K+ G R + LF A+ P C
Sbjct: 298 TTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGSGEHESSR 357
Query: 123 XXQNKLLVEIDGVKQN----DG----IIVIAATNVPESIDKALMRHGRFDHYAFVPKPCV 174
+++LLV++DGV DG ++V+AATN P ID+AL R R + ++P P
Sbjct: 358 RVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYIPLPDF 415
Query: 175 EARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATL 220
E+R+ ++ ++ V A DV++ + ++T G+SG DL N+ A++
Sbjct: 416 ESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASM 461
>AT1G79560.1 | Symbols: EMB156, EMB36, EMB1047, FTSH12 | FTSH
protease 12 | chr1:29926976-29932308 FORWARD LENGTH=1008
Length = 1008
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 23/275 (8%)
Query: 12 ESSTKFSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKA 71
E+ + + +V+ G D L E++ Y+ +P + F +G LL GPP TGKT+ ++
Sbjct: 487 ETKSMYKEVVLGGD-VWDLLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFART 545
Query: 72 VAGEVGVPFFSCSGSEF-DDKFAGARKMSDLFAAAKKRPPCXXXXXXXXXXXXXQNK--- 127
+A E G+PF SG+EF D + +GA K++++F+ A++ P +
Sbjct: 546 LAKESGLPFVFASGAEFTDSEKSGAAKINEMFSIARRNAPAFVFVDEIDAIAGRHARKDP 605
Query: 128 --------LLVEIDGVKQNDGI---------IVIAATNVPESIDKALMRHGRFDHYAFVP 170
L+ ++DG K+ GI I I ATN P+ +D +R GR D ++
Sbjct: 606 RRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIG 665
Query: 171 KPCVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVV 230
P + R QI H + A+D+D + +T GFSGAD+ N+V+ A + + G +
Sbjct: 666 LPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRKGRSYI 725
Query: 231 TMNYLEFAIRNKIIKDRLMKDERSERHNC-QSYGY 264
+ + ++++ + E+ C QS Y
Sbjct: 726 YQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSY 760
>AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21434155-21438362
REVERSE LENGTH=829
Length = 829
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 131/274 (47%), Gaps = 38/274 (13%)
Query: 2 KLNEEVQPNVESSTKFSDVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGP 60
++ EV P E F+D IG +DE K L+E+V LR P F K +G LL GP
Sbjct: 501 RIRPEVIPANEIGVTFAD-IGSLDETKDSLQELVMLPLRRPDLFQGGLLKPCRGILLFGP 559
Query: 61 PDTGKTMLSKAVAGEVGVPFFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPC------- 111
P TGKTML+KA+A E G F + S S K+ G + + LF A K P
Sbjct: 560 PGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEV 619
Query: 112 ------XXXXXXXXXXXXXQNKLLVEIDGV--KQNDGIIVIAATNVPESIDKALMRHGRF 163
+N+ + DG+ K + I+V+AATN P +D+A++R RF
Sbjct: 620 DSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RF 677
Query: 164 DHYAFVPKPCVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAA 223
+ V P +E+R +IL + +SK K +++D + + T G+SG+DL N+
Sbjct: 678 ERRIMVGLPSIESREKILRTLLSKE-KTENLDFHELGQITEGYSGSDLKNL--------- 727
Query: 224 TDGAKVVTMNYLEFAIRNKIIKDRLMKDERSERH 257
+T Y +R I ++RL ER +R
Sbjct: 728 -----CITAAYR--PVRELIQQERLKDQERKKRE 754
>AT2G27600.1 | Symbols: SKD1, VPS4, ATSKD1 | AAA-type ATPase family
protein | chr2:11781226-11783730 FORWARD LENGTH=435
Length = 435
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 124/227 (54%), Gaps = 28/227 (12%)
Query: 8 QPNVESSTKFSDVIGGIDEAKAKLKE-IVHYLRDPKFFTRLGRKFP-KGFLLVGPPDTGK 65
+PN+ K+SDV G++ AK L+E ++ ++ P+FFT G++ P + FLL GPP TGK
Sbjct: 126 KPNI----KWSDV-AGLESAKQALQEAVILPVKFPQFFT--GKRRPWRAFLLYGPPGTGK 178
Query: 66 TMLSKAVAGEVGVPFFSCSGSEFDDKFAGARK--MSDLFAAAKKRPPCXX---------- 113
+ L+KAVA E FFS S S+ K+ G + +S+LF A++ P
Sbjct: 179 SYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPSIIFVDEIDSLCG 238
Query: 114 ---XXXXXXXXXXXQNKLLVEIDGVKQND-GIIVIAATNVPESIDKALMRHGRFDHYAFV 169
+ +LLV++ GV ND ++V+AATN P ++D+A+ R RFD ++
Sbjct: 239 TRGEGNESEASRRIKTELLVQMQGVGHNDEKVLVLAATNTPYALDQAIRR--RFDKRIYI 296
Query: 170 PKPCVEARRQILESHMSKV-LKADDVDLMIITKKTNGFSGADLANMV 215
P P +AR+ + + H+ + D + +KT GFSG+D++ V
Sbjct: 297 PLPEAKARQHMFKVHLGDTPHNLTEPDFEYLGQKTEGFSGSDVSVCV 343
>AT5G08470.1 | Symbols: PEX1 | peroxisome 1 | chr5:2735925-2742731
FORWARD LENGTH=1130
Length = 1130
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 103/217 (47%), Gaps = 15/217 (6%)
Query: 21 IGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGVP 79
+GG+ + K +KE++ + PK F + + LL GPP GKT + A A +
Sbjct: 846 VGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
Query: 80 FFSCSGSEFDDKFAGARKMS--DLFAAAKKRPPCXXXXXXXXXXXXXQ------------ 125
F S G E +K+ GA + + D+F+ A PC +
Sbjct: 906 FISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRVV 965
Query: 126 NKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQILESHM 185
N+ L E+DGV+ G+ V AAT+ P+ +D AL+R GR D P R +IL
Sbjct: 966 NQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEILTVLS 1025
Query: 186 SKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEA 222
K+L ADD+DL I T GFSGADL ++ A L A
Sbjct: 1026 RKLLMADDIDLEPIALMTEGFSGADLQALLSDAQLAA 1062
>AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801255
REVERSE LENGTH=829
Length = 829
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 114/231 (49%), Gaps = 21/231 (9%)
Query: 6 EVQPNVESSTKFSDVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTG 64
EV P E + F D IG +DE K L+E+V LR P FT K +G LL GPP TG
Sbjct: 509 EVIPAEEINVTFKD-IGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTG 567
Query: 65 KTMLSKAVAGEVGVPFFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPC----------- 111
KTML+KA+A E G F + S S K+ G + + LF A K P
Sbjct: 568 KTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSML 627
Query: 112 --XXXXXXXXXXXXXQNKLLVEIDGV--KQNDGIIVIAATNVPESIDKALMRHGRFDHYA 167
+N+ + DG+ K + I+V+AATN P +D+A++R RF+
Sbjct: 628 GQRTRVGEHEAMRKIKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRI 685
Query: 168 FVPKPCVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLA 218
V P VE R +IL + ++K +++D + T G++G+DL N+ A
Sbjct: 686 MVGLPAVENREKILRTLLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTA 736
>AT1G64110.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801240
REVERSE LENGTH=824
Length = 824
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 114/231 (49%), Gaps = 21/231 (9%)
Query: 6 EVQPNVESSTKFSDVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTG 64
EV P E + F D IG +DE K L+E+V LR P FT K +G LL GPP TG
Sbjct: 504 EVIPAEEINVTFKD-IGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTG 562
Query: 65 KTMLSKAVAGEVGVPFFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPC----------- 111
KTML+KA+A E G F + S S K+ G + + LF A K P
Sbjct: 563 KTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSML 622
Query: 112 --XXXXXXXXXXXXXQNKLLVEIDGV--KQNDGIIVIAATNVPESIDKALMRHGRFDHYA 167
+N+ + DG+ K + I+V+AATN P +D+A++R RF+
Sbjct: 623 GQRTRVGEHEAMRKIKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRI 680
Query: 168 FVPKPCVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLA 218
V P VE R +IL + ++K +++D + T G++G+DL N+ A
Sbjct: 681 MVGLPAVENREKILRTLLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTA 731
>AT1G64110.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801255
REVERSE LENGTH=827
Length = 827
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 114/231 (49%), Gaps = 21/231 (9%)
Query: 6 EVQPNVESSTKFSDVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTG 64
EV P E + F D IG +DE K L+E+V LR P FT K +G LL GPP TG
Sbjct: 507 EVIPAEEINVTFKD-IGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTG 565
Query: 65 KTMLSKAVAGEVGVPFFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPC----------- 111
KTML+KA+A E G F + S S K+ G + + LF A K P
Sbjct: 566 KTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSML 625
Query: 112 --XXXXXXXXXXXXXQNKLLVEIDGV--KQNDGIIVIAATNVPESIDKALMRHGRFDHYA 167
+N+ + DG+ K + I+V+AATN P +D+A++R RF+
Sbjct: 626 GQRTRVGEHEAMRKIKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRI 683
Query: 168 FVPKPCVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLA 218
V P VE R +IL + ++K +++D + T G++G+DL N+ A
Sbjct: 684 MVGLPAVENREKILRTLLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTA 734
>AT1G09100.1 | Symbols: RPT5B | 26S proteasome AAA-ATPase subunit
RPT5B | chr1:2936675-2939258 REVERSE LENGTH=423
Length = 423
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 108/218 (49%), Gaps = 18/218 (8%)
Query: 12 ESSTKFSDVIGGIDEAKAKLKE-IVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSK 70
E T+ + IGG+++ +L E IV + + F +LG + PKG LL GPP TGKT++++
Sbjct: 163 EKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMAR 222
Query: 71 AVAGEVGVPFFSCSGSEFDDKFA--GARKMSDLFAAAKKRPPCX---------------X 113
A A + F +G + F GA+ + D F AK++ PC
Sbjct: 223 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDS 282
Query: 114 XXXXXXXXXXXQNKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPC 173
+LL ++DG +D I VIAATN + +D ALMR GR D P P
Sbjct: 283 EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPT 342
Query: 174 VEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADL 211
EAR +IL+ H K+ DV+ + + T+ F+GA L
Sbjct: 343 EEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQL 380
>AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | regulatory particle
triple-A ATPase 5A | chr3:1603540-1605993 FORWARD
LENGTH=424
Length = 424
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 108/218 (49%), Gaps = 18/218 (8%)
Query: 12 ESSTKFSDVIGGIDEAKAKLKE-IVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSK 70
E T+ + IGG+++ +L E IV + + F +LG + PKG LL GPP TGKT++++
Sbjct: 164 EKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMAR 223
Query: 71 AVAGEVGVPFFSCSGSEFDDKFA--GARKMSDLFAAAKKRPPC---------------XX 113
A A + F +G + F GA+ + D F AK++ PC
Sbjct: 224 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDS 283
Query: 114 XXXXXXXXXXXQNKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPC 173
+LL ++DG ++ I VIAATN + +D ALMR GR D P P
Sbjct: 284 EVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPT 343
Query: 174 VEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADL 211
EAR +IL+ H K+ DV+ + + T+ F+GA L
Sbjct: 344 EEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQL 381
>AT1G02890.1 | Symbols: | AAA-type ATPase family protein |
chr1:645372-651797 REVERSE LENGTH=1246
Length = 1246
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 115/232 (49%), Gaps = 22/232 (9%)
Query: 2 KLNEEVQPNVESSTKFSDVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFP-KGFLLVG 59
KL +V P + FSD IG ++ K LKE+V L+ P+ F + P KG LL G
Sbjct: 928 KLLSDVIPPSDIGVSFSD-IGALENVKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFG 986
Query: 60 PPDTGKTMLSKAVAGEVGVPFFSCSGSEFDDKF--AGARKMSDLFAAAKKRPPCXXXXXX 117
PP TGKTML+KAVA E G F + S S K+ G + + +F+ A K P
Sbjct: 987 PPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDE 1046
Query: 118 X-------------XXXXXXQNKLLVEIDGVKQNDG--IIVIAATNVPESIDKALMRHGR 162
+N+ ++ DG++ D ++V+AATN P +D+A++R R
Sbjct: 1047 VDSMLGRRENPGEHEAMRKMKNEFMINWDGLRTKDKERVLVLAATNRPFDLDEAVIR--R 1104
Query: 163 FDHYAFVPKPCVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANM 214
V P R +IL ++K A+DVDL I T+G+SG+DL N+
Sbjct: 1105 LPRRLMVNLPDSANRSKILSVILAKEEMAEDVDLEAIANMTDGYSGSDLKNL 1156
>AT2G20140.1 | Symbols: | AAA-type ATPase family protein |
chr2:8692736-8694837 FORWARD LENGTH=443
Length = 443
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 104/220 (47%), Gaps = 18/220 (8%)
Query: 21 IGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGVP 79
IGG++ ++KE V L P+ + +G K PKG +L G P TGKT+L+KAVA
Sbjct: 190 IGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSAT 249
Query: 80 FFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPCXXXXXXXXXXXXXQN----------- 126
F GSE K+ G + + +LF A P +
Sbjct: 250 FLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQ 309
Query: 127 ----KLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQILE 182
+LL ++DG + VI ATN ES+D AL+R GR D P P ++ RR+I +
Sbjct: 310 RTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ 369
Query: 183 SHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEA 222
H SK+ A+DV+L + FSGAD+ + A L A
Sbjct: 370 IHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLA 409
>AT3G01610.1 | Symbols: CDC48C, emb1354 | cell division cycle 48C |
chr3:231787-235057 FORWARD LENGTH=820
Length = 820
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 112/223 (50%), Gaps = 17/223 (7%)
Query: 19 DVIGGIDEAKAKL-KEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVG 77
D +GG+D + + + IV ++ P + G GFLL GPP GKT+++KA A E G
Sbjct: 528 DDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAG 587
Query: 78 VPFFSCSGSEFDDKFAGARKMS--DLFAAAKKRPPCXXXXXXXXXXXXXQ---------- 125
F G+E +K+ G +++ LF A+ PC +
Sbjct: 588 ANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWVVER 647
Query: 126 --NKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQILES 183
N+ LVE+DG ++ + + VI ATN P+ +D A +R GRF + +VP P + R IL++
Sbjct: 648 LLNQFLVELDGGERRN-VYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKA 706
Query: 184 HMSKVLKADDVDLMIITKKT-NGFSGADLANMVHLATLEAATD 225
K VDL I K GFSGADLA++V AT +A +
Sbjct: 707 IARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEE 749
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 107/227 (47%), Gaps = 27/227 (11%)
Query: 22 GGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGVPF 80
GGI + +L+ V + + +P+ F ++G K P G L GPP GKT L+ A+A E GVPF
Sbjct: 236 GGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPF 295
Query: 81 FSCSGSEFDDKFAGARK--MSDLFAAAKKRPP------------CXXXXXXXXXXXXXQN 126
+ S +E +GA + + +LF+ A + P
Sbjct: 296 YKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEKRIVT 355
Query: 127 KLLVEIDGVKQNDG-----------IIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVE 175
+LL +DG N G ++VI ATN P+++D AL R GRF+ + P +
Sbjct: 356 QLLTCMDG-PGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDED 414
Query: 176 ARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEA 222
AR +IL K+ D I + T GF GADL ++ +LA +A
Sbjct: 415 ARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKA 461
>AT1G02890.2 | Symbols: | AAA-type ATPase family protein |
chr1:645372-651797 REVERSE LENGTH=1218
Length = 1218
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 111/220 (50%), Gaps = 26/220 (11%)
Query: 2 KLNEEVQPNVESSTKFSDVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFP-KGFLLVG 59
KL +V P + FSD IG ++ K LKE+V L+ P+ F + P KG LL G
Sbjct: 928 KLLSDVIPPSDIGVSFSD-IGALENVKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFG 986
Query: 60 PPDTGKTMLSKAVAGEVGVPFFSCSGSEFD---DKFAGARKMSDLFAAAKKRPPCXXXXX 116
PP TGKTML+KAVA E G F + S S D G R+ A +K
Sbjct: 987 PPGTGKTMLAKAVATEAGANFINISMSSITSKVDSMLGRRENPGEHEAMRK--------- 1037
Query: 117 XXXXXXXXQNKLLVEIDGVKQNDG--IIVIAATNVPESIDKALMRHGRFDHYAFVPKPCV 174
+N+ ++ DG++ D ++V+AATN P +D+A++R R V P
Sbjct: 1038 -------MKNEFMINWDGLRTKDKERVLVLAATNRPFDLDEAVIR--RLPRRLMVNLPDS 1088
Query: 175 EARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANM 214
R +IL ++K A+DVDL I T+G+SG+DL N+
Sbjct: 1089 ANRSKILSVILAKEEMAEDVDLEAIANMTDGYSGSDLKNL 1128
>AT4G29040.1 | Symbols: RPT2a | regulatory particle AAA-ATPase 2A |
chr4:14312369-14314386 FORWARD LENGTH=443
Length = 443
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 104/220 (47%), Gaps = 18/220 (8%)
Query: 21 IGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGVP 79
IGG++ ++KE V L P+ + +G K PKG +L G P TGKT+L+KAVA
Sbjct: 190 IGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSAT 249
Query: 80 FFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPCXXXXXXXXXXXXXQN----------- 126
F GSE K+ G + + +LF A P +
Sbjct: 250 FLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQ 309
Query: 127 ----KLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQILE 182
+LL ++DG + VI ATN ES+D AL+R GR D P P ++ RR+I +
Sbjct: 310 RTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ 369
Query: 183 SHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEA 222
H SK+ ++DV+L + FSGAD+ + A L A
Sbjct: 370 IHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLA 409
>AT3G27120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:10000248-10003265
REVERSE LENGTH=476
Length = 476
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 19 DVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFP-KGFLLVGPPDTGKTMLSKAVAGEV 76
D I G++ AK + E+V + L P F G + P KG LL GPP TGKTM+ KA+AGE
Sbjct: 199 DDIAGLEHAKKCVTEMVIWPLLRPDIFK--GCRSPGKGLLLFGPPGTGKTMIGKAIAGEA 256
Query: 77 GVPFFSCSGSEFDDKF--AGARKMSDLFAAAKKRPPCX-------------XXXXXXXXX 121
FF S S K+ G + + LF A R P
Sbjct: 257 KATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSDGEHESS 316
Query: 122 XXXQNKLLVEIDGVKQ-NDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQI 180
+ + L+E++G ++ I++I ATN P+ +D+A R R ++P P EAR I
Sbjct: 317 RRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARR--RLTKRLYIPLPSSEARAWI 374
Query: 181 LESHMSK--VLKADDVDLMIITKKTNGFSGADLANMVHLATL 220
+++ + K + D D+ II T G+SG+D+ N+V AT+
Sbjct: 375 IQNLLKKDGLFTLSDDDMNIICNLTEGYSGSDMKNLVKDATM 416
>AT4G02480.1 | Symbols: | AAA-type ATPase family protein |
chr4:1082082-1088680 REVERSE LENGTH=1265
Length = 1265
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 113/232 (48%), Gaps = 22/232 (9%)
Query: 2 KLNEEVQPNVESSTKFSDVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFP-KGFLLVG 59
KL +V P + F D IG ++ K LKE+V L+ P+ F + P KG LL G
Sbjct: 947 KLLSDVIPPSDIGVSFDD-IGALENVKETLKELVMLPLQRPELFDKGQLTKPTKGILLFG 1005
Query: 60 PPDTGKTMLSKAVAGEVGVPFFSCSGSEFDDKF--AGARKMSDLFAAAKKRPPCXXXXXX 117
PP TGKTML+KAVA E G F + S S K+ G + + +F+ A K P
Sbjct: 1006 PPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDE 1065
Query: 118 X-------------XXXXXXQNKLLVEIDGVKQND--GIIVIAATNVPESIDKALMRHGR 162
+N+ +V DG++ D ++V+AATN P +D+A++R R
Sbjct: 1066 VDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIR--R 1123
Query: 163 FDHYAFVPKPCVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANM 214
V P R +IL ++K A DVDL I T+G+SG+DL N+
Sbjct: 1124 LPRRLMVNLPDATNRSKILSVILAKEEIAPDVDLEAIANMTDGYSGSDLKNL 1175
>AT5G58290.1 | Symbols: RPT3 | regulatory particle triple-A ATPase 3
| chr5:23569155-23571116 FORWARD LENGTH=408
Length = 408
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 106/228 (46%), Gaps = 18/228 (7%)
Query: 21 IGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGVP 79
IGG D K +++E V L + + ++G P+G LL GPP TGKTML+KAVA
Sbjct: 157 IGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAA 216
Query: 80 FFSCSGSEFDDKFAGA--RKMSDLFAAAKKRPPCXXXXXXXXXXXXXQ------------ 125
F GSEF K+ G R + D+F AK+ P +
Sbjct: 217 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 276
Query: 126 ---NKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQILE 182
+LL ++DG Q + VI ATN +++D AL+R GR D P P +R + +
Sbjct: 277 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 336
Query: 183 SHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVV 230
SK+ +D+VDL + + S A++A + A + A V+
Sbjct: 337 VCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVI 384
>AT3G15120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5088487-5095482
REVERSE LENGTH=1954
Length = 1954
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 108/225 (48%), Gaps = 21/225 (9%)
Query: 19 DVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVG 77
D + G++ +KE+V L P+FF LG P+G LL G P TGKT++ +A+ G +
Sbjct: 719 DSVAGLEGVTQCMKEVVLIPLLYPEFFDNLGLTPPRGILLHGHPGTGKTLVVRALIGSLA 778
Query: 78 -----VPFFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPC------------XXXXXXX 118
+ +F+ G++ K+ G R++ LF A+K P
Sbjct: 779 RGNRRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPKRSRQQD 838
Query: 119 XXXXXXQNKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARR 178
+ LL +DG+K ++VI ATN P++ID AL R GRFD + P P V+ R
Sbjct: 839 QTHSSVVSTLLALLDGLKSRGSVVVIGATNYPDAIDPALRRPGRFDREIYFPLPSVDDRA 898
Query: 179 QILESHMSKVLK-ADDVDLMIITKKTNGFSGADLANMVHLATLEA 222
I+ H K K L I K+T GF+GAD+ + A + A
Sbjct: 899 AIISLHTRKWPKPVSGYLLKWIAKETAGFAGADIQALCTQAAMIA 943
>AT2G45500.2 | Symbols: | AAA-type ATPase family protein |
chr2:18749973-18752636 REVERSE LENGTH=487
Length = 487
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 14 STKFSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVA 73
S K+ DV G +A L+ ++ + FT L R+ +G LL GPP GKTML+KAVA
Sbjct: 212 SVKWDDVAGLNGAKQALLEMVILPAKRRDLFTGL-RRPARGLLLFGPPGNGKTMLAKAVA 270
Query: 74 GEVGVPFFSCSGSEFDDKFAG-ARKM-SDLFAAAKKRPP------------CXXXXXXXX 119
E FF+ S S K+ G A K+ LF A R P
Sbjct: 271 SESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEIDSIMSTRSTSENE 330
Query: 120 XXXXXQNKLLVEIDGVKQN--DGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEAR 177
+++ L++ DGV N D +I+I ATN P+ +D A++R R +VP P R
Sbjct: 331 ASRRLKSEFLIQFDGVTSNPDDLVIIIGATNKPQELDDAVLR--RLVKRIYVPLPDSNVR 388
Query: 178 RQILESHMS-KVLKADDVDLMIITKKTNGFSGADL------ANMVHLATLEA---ATDGA 227
+ + ++ + + D D+ I K+T G+SG+DL A M+ + L A
Sbjct: 389 KLLFKTKLKCQPHSLSDGDIDKIVKETEGYSGSDLQALCEEAAMMPIRELGANILTIQAN 448
Query: 228 KVVTMNYLEFAIRNKIIKDRLMKD--ERSERHNCQ 260
KV ++ Y +F +I+ L K E ER N +
Sbjct: 449 KVRSLRYDDFRKSMAVIRPSLSKSKWEELERWNSE 483
>AT2G45500.1 | Symbols: | AAA-type ATPase family protein |
chr2:18749973-18752636 REVERSE LENGTH=491
Length = 491
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 14 STKFSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVA 73
S K+ DV G +A L+ ++ + FT L R+ +G LL GPP GKTML+KAVA
Sbjct: 216 SVKWDDVAGLNGAKQALLEMVILPAKRRDLFTGL-RRPARGLLLFGPPGNGKTMLAKAVA 274
Query: 74 GEVGVPFFSCSGSEFDDKFAG-ARKM-SDLFAAAKKRPP------------CXXXXXXXX 119
E FF+ S S K+ G A K+ LF A R P
Sbjct: 275 SESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEIDSIMSTRSTSENE 334
Query: 120 XXXXXQNKLLVEIDGVKQN--DGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEAR 177
+++ L++ DGV N D +I+I ATN P+ +D A++R R +VP P R
Sbjct: 335 ASRRLKSEFLIQFDGVTSNPDDLVIIIGATNKPQELDDAVLR--RLVKRIYVPLPDSNVR 392
Query: 178 RQILESHMS-KVLKADDVDLMIITKKTNGFSGADL------ANMVHLATLEA---ATDGA 227
+ + ++ + + D D+ I K+T G+SG+DL A M+ + L A
Sbjct: 393 KLLFKTKLKCQPHSLSDGDIDKIVKETEGYSGSDLQALCEEAAMMPIRELGANILTIQAN 452
Query: 228 KVVTMNYLEFAIRNKIIKDRLMKD--ERSERHNCQ 260
KV ++ Y +F +I+ L K E ER N +
Sbjct: 453 KVRSLRYDDFRKSMAVIRPSLSKSKWEELERWNSE 487
>AT1G53750.1 | Symbols: RPT1A | regulatory particle triple-A 1A |
chr1:20065921-20068324 REVERSE LENGTH=426
Length = 426
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 113/243 (46%), Gaps = 19/243 (7%)
Query: 21 IGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGVP 79
+GG E K++E+V + P+ F +LG PKG L GPP TGKT+L++AVA
Sbjct: 170 VGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDAC 229
Query: 80 FFSCSGSEFDDKFA--GARKMSDLFAAAKKRPPCXXXXXXXXXXXXXQ-----------N 126
F GSE K+ GAR + +LF A+ + C +
Sbjct: 230 FIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQ 289
Query: 127 KLLVEI----DGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQILE 182
+ ++EI DG I V+ ATN P+++D AL+R GR D P +E+R QI +
Sbjct: 290 RTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFK 349
Query: 183 SHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVVTMNYLEFAIRNK 242
H + D+ ++ + +GAD+ ++ A + A K VT A+ NK
Sbjct: 350 IHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAV-NK 408
Query: 243 IIK 245
+IK
Sbjct: 409 VIK 411
>AT1G53780.2 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077713 REVERSE LENGTH=620
Length = 620
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 113/247 (45%), Gaps = 20/247 (8%)
Query: 17 FSDVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGE 75
+SD IGG E K++E+V + P+ F RLG PKG L GPP +GKT++++AVA
Sbjct: 360 YSD-IGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANR 418
Query: 76 VGVPFFSCSGSEFDDKF--AGARKMSDLFAAAKKRPPCXX---------------XXXXX 118
G F GSE K+ GAR + +LF A+ + C
Sbjct: 419 TGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSD 478
Query: 119 XXXXXXQNKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARR 178
++L ++DG I V+ ATN P+ +D AL+R GR D P +E R
Sbjct: 479 NEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRT 538
Query: 179 QILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVVTMNYLEFA 238
QI + H + D+ ++ +GAD+ ++ A + A K VT A
Sbjct: 539 QIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDA 598
Query: 239 IRNKIIK 245
+ NK++K
Sbjct: 599 V-NKVVK 604
>AT1G53780.3 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077235 REVERSE LENGTH=599
Length = 599
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 113/247 (45%), Gaps = 20/247 (8%)
Query: 17 FSDVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGE 75
+SD IGG E K++E+V + P+ F RLG PKG L GPP +GKT++++AVA
Sbjct: 339 YSD-IGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANR 397
Query: 76 VGVPFFSCSGSEFDDKF--AGARKMSDLFAAAKKRPPCXX---------------XXXXX 118
G F GSE K+ GAR + +LF A+ + C
Sbjct: 398 TGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSD 457
Query: 119 XXXXXXQNKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARR 178
++L ++DG I V+ ATN P+ +D AL+R GR D P +E R
Sbjct: 458 NEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRT 517
Query: 179 QILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVVTMNYLEFA 238
QI + H + D+ ++ +GAD+ ++ A + A K VT A
Sbjct: 518 QIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDA 577
Query: 239 IRNKIIK 245
+ NK++K
Sbjct: 578 V-NKVVK 583
>AT1G50140.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:18569921-18578663
REVERSE LENGTH=1003
Length = 1003
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 108/222 (48%), Gaps = 22/222 (9%)
Query: 12 ESSTKFSDVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFP-KGFLLVGPPDTGKTMLS 69
E KF D IG +++ K L E+V +R P+ F R P KG LL GPP TGKT+L+
Sbjct: 708 EIGVKFED-IGALEDVKKALNELVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLA 766
Query: 70 KAVAGEVGVPFFSCSGSEFDDKFAG-ARKMSD-LFAAAKKRPPCXX-------------X 114
KA+A E G F S +GS K+ G A K++ LF+ A K P
Sbjct: 767 KALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFATKLAPVIIFVDEIDSLLGARGG 826
Query: 115 XXXXXXXXXXQNKLLVEIDGVKQNDG--IIVIAATNVPESIDKALMRHGRFDHYAFVPKP 172
+N+ + DG++ D I+++ ATN P +D A++R R +V P
Sbjct: 827 SSEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIR--RLPRRIYVDLP 884
Query: 173 CVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANM 214
E R +IL+ ++ D + K+T G+SG+DL N+
Sbjct: 885 DAENRLKILKIFLTPENLESDFQFEKLAKETEGYSGSDLKNL 926
>AT1G53780.1 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077235 REVERSE LENGTH=598
Length = 598
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 113/247 (45%), Gaps = 20/247 (8%)
Query: 17 FSDVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGE 75
+SD IGG E K++E+V + P+ F RLG PKG L GPP +GKT++++AVA
Sbjct: 338 YSD-IGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANR 396
Query: 76 VGVPFFSCSGSEFDDKF--AGARKMSDLFAAAKKRPPCXX---------------XXXXX 118
G F GSE K+ GAR + +LF A+ + C
Sbjct: 397 TGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSD 456
Query: 119 XXXXXXQNKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARR 178
++L ++DG I V+ ATN P+ +D AL+R GR D P +E R
Sbjct: 457 NEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRT 516
Query: 179 QILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLEAATDGAKVVTMNYLEFA 238
QI + H + D+ ++ +GAD+ ++ A + A K VT A
Sbjct: 517 QIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDA 576
Query: 239 IRNKIIK 245
+ NK++K
Sbjct: 577 V-NKVVK 582
>AT1G50140.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:18569921-18578663
REVERSE LENGTH=981
Length = 981
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 108/222 (48%), Gaps = 22/222 (9%)
Query: 12 ESSTKFSDVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFP-KGFLLVGPPDTGKTMLS 69
E KF D IG +++ K L E+V +R P+ F R P KG LL GPP TGKT+L+
Sbjct: 686 EIGVKFED-IGALEDVKKALNELVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLA 744
Query: 70 KAVAGEVGVPFFSCSGSEFDDKFAG-ARKMSD-LFAAAKKRPPCXX-------------X 114
KA+A E G F S +GS K+ G A K++ LF+ A K P
Sbjct: 745 KALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFATKLAPVIIFVDEIDSLLGARGG 804
Query: 115 XXXXXXXXXXQNKLLVEIDGVKQNDG--IIVIAATNVPESIDKALMRHGRFDHYAFVPKP 172
+N+ + DG++ D I+++ ATN P +D A++R R +V P
Sbjct: 805 SSEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIR--RLPRRIYVDLP 862
Query: 173 CVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANM 214
E R +IL+ ++ D + K+T G+SG+DL N+
Sbjct: 863 DAENRLKILKIFLTPENLESDFQFEKLAKETEGYSGSDLKNL 904
>AT2G34560.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14560266-14562695
FORWARD LENGTH=393
Length = 393
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 27/233 (11%)
Query: 8 QPNVESSTKFSDVIGGIDEAKAKLKE-IVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKT 66
PN++ + I G++ AK LKE +V ++ P +F L + KG LL GPP TGKT
Sbjct: 106 NPNIKWES-----IKGLENAKKLLKEAVVMPIKYPTYFNGLLTPW-KGILLFGPPGTGKT 159
Query: 67 MLSKAVAGEVGVPFFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPCX------------ 112
ML+KAVA E FF+ S S K+ G + + LF A+ P
Sbjct: 160 MLAKAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQ 219
Query: 113 ---XXXXXXXXXXXXQNKLLVEIDGV-KQNDGIIVIAATNVPESIDKALMRHGRFDHYAF 168
+ +LL+++DG+ K N+ + V+AATN+P +D A++R R +
Sbjct: 220 RGGEGRSEHEASRRLKTELLIQMDGLQKTNELVFVLAATNLPWELDAAMLR--RLEKRIL 277
Query: 169 VPKPCVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLE 221
VP P EARR + E + + + ++ +K+ G+SG+D+ + A ++
Sbjct: 278 VPLPDPEARRGMFEMLIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQ 330
>AT2G34560.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14560266-14562695
FORWARD LENGTH=384
Length = 384
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 27/233 (11%)
Query: 8 QPNVESSTKFSDVIGGIDEAKAKLKE-IVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKT 66
PN++ + I G++ AK LKE +V ++ P +F L + KG LL GPP TGKT
Sbjct: 97 NPNIKWES-----IKGLENAKKLLKEAVVMPIKYPTYFNGLLTPW-KGILLFGPPGTGKT 150
Query: 67 MLSKAVAGEVGVPFFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPCX------------ 112
ML+KAVA E FF+ S S K+ G + + LF A+ P
Sbjct: 151 MLAKAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQ 210
Query: 113 ---XXXXXXXXXXXXQNKLLVEIDGV-KQNDGIIVIAATNVPESIDKALMRHGRFDHYAF 168
+ +LL+++DG+ K N+ + V+AATN+P +D A++R R +
Sbjct: 211 RGGEGRSEHEASRRLKTELLIQMDGLQKTNELVFVLAATNLPWELDAAMLR--RLEKRIL 268
Query: 169 VPKPCVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLATLE 221
VP P EARR + E + + + ++ +K+ G+SG+D+ + A ++
Sbjct: 269 VPLPDPEARRGMFEMLIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQ 321
>AT3G19740.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6855944-6862930
REVERSE LENGTH=993
Length = 993
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 108/222 (48%), Gaps = 22/222 (9%)
Query: 12 ESSTKFSDVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFP-KGFLLVGPPDTGKTMLS 69
E KF D IG ++ K L E+V +R P+ FTR P KG LL GPP TGKT+L+
Sbjct: 698 EIGVKFDD-IGALEHVKKTLNELVILPMRRPELFTRGNLLRPCKGILLFGPPGTGKTLLA 756
Query: 70 KAVAGEVGVPFFSCSGSEFDDKFAG-ARKMSD-LFAAAKKRPPCXXXXXXX--------- 118
KA+A E G F S +GS K+ G A K++ LF+ A K P
Sbjct: 757 KALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGG 816
Query: 119 ----XXXXXXQNKLLVEIDGVKQNDG--IIVIAATNVPESIDKALMRHGRFDHYAFVPKP 172
+N+ + DG++ D I+++ ATN P +D A++R R +V P
Sbjct: 817 AFEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIR--RLPRRIYVDLP 874
Query: 173 CVEARRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANM 214
E R +IL+ ++ + + K+T G+SG+DL N+
Sbjct: 875 DAENRLKILKIFLTPENLETGFEFDKLAKETEGYSGSDLKNL 916
>AT1G62130.1 | Symbols: | AAA-type ATPase family protein |
chr1:22962365-22968920 REVERSE LENGTH=1043
Length = 1043
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 109/218 (50%), Gaps = 14/218 (6%)
Query: 6 EVQPNVESSTKFSDVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFP-KGFLLVGPPDT 63
++ P E F D IG ++ K LKE+V + P+ F + P G LL GP T
Sbjct: 741 DIIPPSEIGVTFDD-IGALENVKDTLKELVMLPFQWPELFCKGQLTKPCNGILLFGPSGT 799
Query: 64 GKTMLSKAVAGEVGVPFFSCSGSEFDDKFAGARKMSDLFAAAKKRPPC-----XXXXXXX 118
GKTML+KAVA E G + S S + + G + + +F+ A K P
Sbjct: 800 GKTMLAKAVATEAGANLINMSMSRWFSE--GEKYVKAVFSLASKISPSIIFLDEVESMLH 857
Query: 119 XXXXXXQNKLLVEIDGVKQNDG--IIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEA 176
+N+ ++ DG++ N+ ++V+AATN P +D+A++R R H V P +
Sbjct: 858 RYRLKTKNEFIINWDGLRTNEKERVLVLAATNRPFDLDEAVIR--RLPHRLMVGLPDARS 915
Query: 177 RRQILESHMSKVLKADDVDLMIITKKTNGFSGADLANM 214
R +IL+ +SK + D D+ + TNG+SG DL N+
Sbjct: 916 RSKILKVILSKEDLSPDFDIDEVASMTNGYSGNDLKNL 953
>AT1G03000.1 | Symbols: PEX6 | peroxin 6 | chr1:688057-692453
REVERSE LENGTH=941
Length = 941
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 112/234 (47%), Gaps = 24/234 (10%)
Query: 9 PNVESSTKFSDVIGGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTML 68
PNV K+ DV GG+++ K + + V K G + G LL GPP TGKT+L
Sbjct: 653 PNV----KWDDV-GGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLL 707
Query: 69 SKAVAGEVGVPFFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPCXXXXXXXXXXXXXQ- 125
+KAVA E + F S G E + + G + + D+F A+ PC +
Sbjct: 708 AKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARG 767
Query: 126 -------------NKLLVEIDGVK-QNDGIIVIAATNVPESIDKALMRHGRFDHYAFV-P 170
+++L EIDG+ + + +I A+N P+ ID AL+R GRFD +V
Sbjct: 768 ASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGV 827
Query: 171 KPCVEARRQILESHMSKVLKADDVDLMIITKKT-NGFSGADLANMVHLATLEAA 223
R ++L++ K ++DV L + KK + F+GAD+ + A +AA
Sbjct: 828 NADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAA 881
>AT3G04340.1 | Symbols: emb2458 | FtsH extracellular protease family
| chr3:1146943-1153341 REVERSE LENGTH=1320
Length = 1320
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 26/198 (13%)
Query: 22 GGIDEAKAKLKEIVHYLRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGVPFF 81
I+ + ++ E+V +L++PK F +G + P+G L+VG TGKT L+ A+A E VP
Sbjct: 787 ASIESMREEINEVVAFLQNPKAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVV 846
Query: 82 SCSGSEFD-------------DKFAGARKMS---------DLFAAAKKRPPCXXXXXXXX 119
+ E + + F AR ++ DLFA + +
Sbjct: 847 NVEAQELEAGLWVGQSAANVRELFQTARDLAPVIIFVEDFDLFAGVRGK----FVHTKQQ 902
Query: 120 XXXXXQNKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQ 179
N+LLVE+DG ++ DG++++A T + ID+AL R GR D + P R +
Sbjct: 903 DHESFINQLLVELDGFEKQDGVVLMATTRNHKQIDEALRRPGRMDRVFHLQSPTEMERER 962
Query: 180 ILESHMSKVLKADDVDLM 197
IL + + + + VDL+
Sbjct: 963 ILHNAAEETMDRELVDLV 980
>AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:12801580-12808190
REVERSE LENGTH=1122
Length = 1122
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 19 DVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFP-KGFLLVGPPDTGKTMLSKAVAGEV 76
D IG +++ K LKE+V L+ P+ F + P KG LL GPP TGKTML+KAVA E
Sbjct: 820 DDIGALEKVKDILKELVMLPLQRPELFCKGELTKPCKGILLFGPPGTGKTMLAKAVAKEA 879
Query: 77 GVPFFSCSGSEFDDKF--AGARKMSDLFAAAKKRPPCXXXXXXX-------------XXX 121
F + S S K+ G + + +F+ A K P
Sbjct: 880 DANFINISMSSITSKWFGEGEKYVKAVFSLASKMSPSVIFVDEVDSMLGRREHPREHEAS 939
Query: 122 XXXQNKLLVEIDGV--KQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQ 179
+N+ ++ DG+ ++ + ++V+AATN P +D+A++R R V P R
Sbjct: 940 RKIKNEFMMHWDGLTTQERERVLVLAATNRPFDLDEAVIR--RLPRRLMVGLPDTSNRAF 997
Query: 180 ILESHMSKVLKADDVDLMIITKKTNGFSGADLANM 214
IL+ ++K + D+D+ I TNG+SG+DL N+
Sbjct: 998 ILKVILAKEDLSPDLDIGEIASMTNGYSGSDLKNL 1032
>AT1G05910.1 | Symbols: | cell division cycle protein 48-related /
CDC48-related | chr1:1790796-1796503 FORWARD LENGTH=1210
Length = 1210
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 108/239 (45%), Gaps = 23/239 (9%)
Query: 6 EVQP-NVESSTKFSDVIGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDT 63
++QP + F D IGG+ E LKE+V + L P+FF P+G LL GPP T
Sbjct: 368 DIQPLQINEDINFDD-IGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVLLCGPPGT 426
Query: 64 GKTMLSKAVAGEVG-----VPFFSCSGSEFDDKFAGA--RKMSDLFAAAKKRPPC----- 111
GKT++++A+A V F+ G++ K+ G R++ LF A++ P
Sbjct: 427 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 486
Query: 112 -------XXXXXXXXXXXXXQNKLLVEIDGVKQNDGIIVIAATNVPESIDKALMRHGRFD 164
+ LL +DG+ +++I ATN ++ID AL R GRFD
Sbjct: 487 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 546
Query: 165 HYAFVPKPCVEARRQILESHMSKVLKADDVDLM-IITKKTNGFSGADLANMVHLATLEA 222
P EAR +IL+ H K +L + G+ GADL + A + A
Sbjct: 547 REFNFSLPGCEARAEILDIHTRKWKHPPTRELKEELAATCVGYCGADLKALCTEAAIRA 605
>AT4G04910.1 | Symbols: NSF | AAA-type ATPase family protein |
chr4:2489696-2495666 REVERSE LENGTH=742
Length = 742
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 29/208 (13%)
Query: 41 PKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEV-GVPFFSCSGSEFDDKFAGA--RK 97
P +RLG K KG LL GPP TGKT++++ + + G +G E KF G +
Sbjct: 239 PHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKN 298
Query: 98 MSDLFAAAKKRPPCXXXXXXXXXXXXXQ----------------------NKLLVEIDGV 135
+ DLFA A++ + N+LL +IDGV
Sbjct: 299 VRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV 358
Query: 136 KQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQILESHMSKV----LKA 191
+ + +++I TN + +D+AL+R GR + + P R QIL+ H +K+
Sbjct: 359 EALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLG 418
Query: 192 DDVDLMIITKKTNGFSGADLANMVHLAT 219
D++L + +T +SGA+L +V AT
Sbjct: 419 TDINLQELAARTKNYSGAELEGVVKSAT 446
>AT5G53540.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21749561-21751099
REVERSE LENGTH=403
Length = 403
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 108/236 (45%), Gaps = 31/236 (13%)
Query: 21 IGGIDEAKAKLKEIVHY-LRDPKFFTR---LGRKFPKGFLLVGPPDTGKTMLSKAVAGEV 76
IGG++ K L E+V L+ P+ F LG + KG LL GPP TGKTML+KA+A E
Sbjct: 89 IGGLESIKQALYELVILPLKRPELFAYGKLLGPQ--KGVLLYGPPGTGKTMLAKAIARES 146
Query: 77 GVPFFSCSGSEFDDKFAG-ARKM-SDLFAAAKKRPPC------------XXXXXXXXXXX 122
F + S K+ G A+K+ S +F+ A K P
Sbjct: 147 EAVFINVKVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVDSFLGQRRSTDNEAMS 206
Query: 123 XXQNKLLVEIDG--VKQNDGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQI 180
+ + + DG QN ++V+AATN P +D+A++R RF + P + R QI
Sbjct: 207 NMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RFPQSFEIGMPDCQERAQI 264
Query: 181 LESHMSKVLKADDVDLMIITKKTNGFSGADLANMVHLAT-------LEAATDGAKV 229
L+ + D++ I + ++G+D+ + A LEA +G +V
Sbjct: 265 LKVVLKGESVESDINYDRIARLCEDYTGSDIFELCKKAAYFPIREILEAEKEGKRV 320
>AT1G45000.2 | Symbols: | AAA-type ATPase family protein |
chr1:17009220-17011607 FORWARD LENGTH=335
Length = 335
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 21 IGGIDEAKAKLKEIVHY-LRDPKFFTRLGRKFPKGFLLVGPPDTGKTMLSKAVAGEVGVP 79
+GG+ + +L+E + L +P+ F R+G K PKG LL GPP TGKT+L++A+A +
Sbjct: 141 VGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDAN 200
Query: 80 FFSCSGSEFDDKFAG--ARKMSDLFAAAKKRPPC 111
F S DK+ G AR + ++F A++ PC
Sbjct: 201 FLKVVSSAIIDKYIGESARLIREMFNYAREHQPC 234
>AT4G27680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:13821263-13823083
FORWARD LENGTH=398
Length = 398
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 24/214 (11%)
Query: 21 IGGIDEAKAKLKEIVHY-LRDPKFFTR---LGRKFPKGFLLVGPPDTGKTMLSKAVAGEV 76
IGG++ K L E+V L+ P+ F LG + KG LL GPP TGKTML+KA+A E
Sbjct: 86 IGGLETIKQALYELVILPLKRPELFAYGKLLGPQ--KGVLLYGPPGTGKTMLAKAIAKES 143
Query: 77 GVPFFSCSGSEFDDKFAG-ARKM-SDLFAAAKKRPPC------------XXXXXXXXXXX 122
G F + S K+ G A+K+ S +F+ A K P
Sbjct: 144 GAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVESFLGQRRSTDHEAMA 203
Query: 123 XXQNKLLVEIDGVKQN--DGIIVIAATNVPESIDKALMRHGRFDHYAFVPKPCVEARRQI 180
+ + + DG + ++V+AATN P +D+A++R R + P R +I
Sbjct: 204 NMKTEFMALWDGFSTDPHARVMVLAATNRPSELDEAILR--RLPQAFEIGIPDRRERAEI 261
Query: 181 LESHMSKVLKADDVDLMIITKKTNGFSGADLANM 214
L+ + D+D I + G++G+D+ +
Sbjct: 262 LKVTLKGERVEPDIDFDHIARLCEGYTGSDIFEL 295