Miyakogusa Predicted Gene

Lj1g3v1787450.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1787450.1 tr|C1N7G2|C1N7G2_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_5368,44.57,0.00000000000006,Multidrug resistance efflux
transporter EmrE,NULL; Mg_trans_NIPA,Magnesium transporter NIPA;
seg,NUL,CUFF.27869.1
         (344 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G11960.1 | Symbols:  | Protein of unknown function (DUF803) |...   397   e-111

>AT5G11960.1 | Symbols:  | Protein of unknown function (DUF803) |
           chr5:3858852-3861462 REVERSE LENGTH=344
          Length = 344

 Score =  397 bits (1020), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 194/343 (56%), Positives = 242/343 (70%)

Query: 1   MWESIVLTVVATAGNNIGKILQKKGTVILPPFSFKFKVLRSYAMNKTWLTGFVMDIFGXX 60
           MWESI LT+ ATAGNNIGK+LQKKGT+ILPP S K KVLR+YA NK W  GF+MDI G  
Sbjct: 1   MWESICLTLAATAGNNIGKVLQKKGTIILPPLSLKLKVLRAYAENKPWALGFLMDIVGAL 60

Query: 61  XXXXXXXXXPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWVGITLAXXXXXXXXXXXX 120
                    PVSV+QPVSGCGLAILS+FSHFYLKEVMN  DW+GIT+A            
Sbjct: 61  LMLRALSLAPVSVVQPVSGCGLAILSVFSHFYLKEVMNVFDWIGITVAGIGTIGVGAGGE 120

Query: 121 XXXXXXLSIFHIPWXXXXXXXXXXXXNGWLRIRKRQRKEQEMMEYDVVEEIIYGLESGIL 180
                 +S+F + W            N WL I KRQR+EQE+ EY+VVEEIIYGLESGIL
Sbjct: 121 EQEASLISVFQLLWLALVVAILFVLLNAWLHIFKRQRREQELGEYEVVEEIIYGLESGIL 180

Query: 181 FGMASVISKMGFLFLEQGFPKLLVPLCLIISVCSSGTGFYYQTRGLKHGRAIVVSTCAAV 240
           FGMASV+SKMGF+F+EQGF  + +P+C+ IS+C SGTGF+YQTRGLKHGRAIVVSTCAAV
Sbjct: 181 FGMASVVSKMGFVFVEQGFSTMFIPMCISISICCSGTGFFYQTRGLKHGRAIVVSTCAAV 240

Query: 241 ASILTGVLAGMLALGERLPSAPKARXXXXXXXXXXXXXXXXXXXSTRVVRFLRLNSQRFK 300
           ASI+TGV+AGM ALGE+LP++P  R                   S+R++R L  + +R +
Sbjct: 241 ASIVTGVVAGMFALGEKLPTSPSGRLLLLLGWLLIMLGVVLLVTSSRLIRHLPRSFRRSR 300

Query: 301 RTSVDKNHGPRRSAASRIREPSPTAVIQAATLNHLLASSSKEK 343
           +TS+++    RR+ +   ++ +P+AVIQAATL+HLL+S SK+K
Sbjct: 301 QTSLERGFNIRRTTSHTPKDTNPSAVIQAATLHHLLSSPSKDK 343