Miyakogusa Predicted Gene

Lj1g3v1786020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1786020.1 Non Chatacterized Hit- tr|Q21JX8|Q21JX8_SACD2
Putative uncharacterized protein OS=Saccharophagus
deg,25.97,6e-19,Ceramidase,Ceramidase; seg,NULL,CUFF.27839.1
         (270 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G11870.2 | Symbols:  | Alkaline phytoceramidase (aPHC) | chr5...   256   1e-68
AT5G11870.1 | Symbols:  | Alkaline phytoceramidase (aPHC) | chr5...   248   3e-66
AT1G71190.1 | Symbols: SAG18 | senescence associated gene 18 | c...   188   4e-48
AT1G71190.2 | Symbols: SAG18 | senescence associated gene 18 | c...   165   4e-41

>AT5G11870.2 | Symbols:  | Alkaline phytoceramidase (aPHC) |
           chr5:3825720-3827363 FORWARD LENGTH=270
          Length = 270

 Score =  256 bits (654), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 124/269 (46%), Positives = 164/269 (60%), Gaps = 1/269 (0%)

Query: 2   MGWVANQRSRRWKTNPRVLGVAFLCCMCFIFFTPTIPRSPTRHQ-FVDNRNLLGVPNTLN 60
           M W+ NQ+  RWK    ++  +FLC    +F TP +P    RH  F D RN +GVPNTLN
Sbjct: 1   MVWLTNQQIGRWKRKRILVVGSFLCWSIIMFITPKVPLDSFRHHIFADKRNFMGVPNTLN 60

Query: 61  VMTSXXXXXXXXXXXXXXXXXXXXNISSQGEVVSWALFYAGIAGVAFGSAYYHLKPDDHR 120
           VMT+                    NIS  GE+  W LFYAGIA +AFGSA+YHLKPDD+R
Sbjct: 61  VMTNFPFLIVGVLGFVLCIGGSFFNISLNGEIWGWTLFYAGIASLAFGSAFYHLKPDDNR 120

Query: 121 VLWDTLPMMXXXXXXXXXXXXERLGHRIGLCCMFALFVAAFLCVLYERFCNDIRFCMIFQ 180
           ++WDTLP++            ER G ++GL C+  L   + L V Y R  ND+R CM FQ
Sbjct: 121 IVWDTLPILIAYSSLFSSFLVERAGEKVGLSCLILLLFISCLSVAYARVFNDLRLCMTFQ 180

Query: 181 FILPLAVPVIAFMYRSRYTHSRYWFWCTGIYLLAKFEGVTDKKMFHVSKYVISGHSLEHL 240
            I  L +PV+A +   +YTHSR+W W T  Y +AK EG+ D K+++ ++Y+ISGHSLEHL
Sbjct: 181 LIPCLVIPVMAVLLPPKYTHSRFWLWATAAYTIAKIEGLADNKIYNANRYIISGHSLEHL 240

Query: 241 CLALIPIFLSIMLFYRELKFQRLVDLKDR 269
           C A+  + L+IML YR ++F RL DLK R
Sbjct: 241 CSAVATLLLTIMLLYRSIRFNRLGDLKGR 269


>AT5G11870.1 | Symbols:  | Alkaline phytoceramidase (aPHC) |
           chr5:3825720-3827241 FORWARD LENGTH=262
          Length = 262

 Score =  248 bits (633), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 119/262 (45%), Positives = 159/262 (60%), Gaps = 1/262 (0%)

Query: 2   MGWVANQRSRRWKTNPRVLGVAFLCCMCFIFFTPTIPRSPTRHQ-FVDNRNLLGVPNTLN 60
           M W+ NQ+  RWK    ++  +FLC    +F TP +P    RH  F D RN +GVPNTLN
Sbjct: 1   MVWLTNQQIGRWKRKRILVVGSFLCWSIIMFITPKVPLDSFRHHIFADKRNFMGVPNTLN 60

Query: 61  VMTSXXXXXXXXXXXXXXXXXXXXNISSQGEVVSWALFYAGIAGVAFGSAYYHLKPDDHR 120
           VMT+                    NIS  GE+  W LFYAGIA +AFGSA+YHLKPDD+R
Sbjct: 61  VMTNFPFLIVGVLGFVLCIGGSFFNISLNGEIWGWTLFYAGIASLAFGSAFYHLKPDDNR 120

Query: 121 VLWDTLPMMXXXXXXXXXXXXERLGHRIGLCCMFALFVAAFLCVLYERFCNDIRFCMIFQ 180
           ++WDTLP++            ER G ++GL C+  L   + L V Y R  ND+R CM FQ
Sbjct: 121 IVWDTLPILIAYSSLFSSFLVERAGEKVGLSCLILLLFISCLSVAYARVFNDLRLCMTFQ 180

Query: 181 FILPLAVPVIAFMYRSRYTHSRYWFWCTGIYLLAKFEGVTDKKMFHVSKYVISGHSLEHL 240
            I  L +PV+A +   +YTHSR+W W T  Y +AK EG+ D K+++ ++Y+ISGHSLEHL
Sbjct: 181 LIPCLVIPVMAVLLPPKYTHSRFWLWATAAYTIAKIEGLADNKIYNANRYIISGHSLEHL 240

Query: 241 CLALIPIFLSIMLFYRELKFQR 262
           C A+  + L+IML YR ++F R
Sbjct: 241 CSAVATLLLTIMLLYRSIRFNR 262


>AT1G71190.1 | Symbols: SAG18 | senescence associated gene 18 |
           chr1:26833597-26834982 REVERSE LENGTH=281
          Length = 281

 Score =  188 bits (477), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 93/244 (38%), Positives = 137/244 (56%), Gaps = 1/244 (0%)

Query: 21  GVAFLCCMCFIFFTPTIPRSPTRHQFVDNRNLLGVPNTLNVMTSXXXXXXXXXXXXX-XX 79
           G A L  +  +  TPTIP+S   H F D R+ LG+PN LNV+++                
Sbjct: 10  GSAILIFIILMIVTPTIPQSQAYHNFADQRSFLGIPNFLNVISNFPFLIIGLIGLILCFY 69

Query: 80  XXXXXNISSQGEVVSWALFYAGIAGVAFGSAYYHLKPDDHRVLWDTLPMMXXXXXXXXXX 139
                + S +GE + W  FY G+A VAFGS+YYHL P+D  +LWD LPM           
Sbjct: 70  PEDYFSFSLRGEKIGWTCFYIGVAAVAFGSSYYHLHPNDATLLWDRLPMTIAFTSIMAIF 129

Query: 140 XXERLGHRIGLCCMFALFVAAFLCVLYERFCNDIRFCMIFQFILPLAVPVIAFMYRSRYT 199
             ER+    G   +  L +A  + +LY RF +D+R   + QF+  + +P++A +    YT
Sbjct: 130 VIERIDEHKGTYSIAPLLLAGLVSILYWRFFDDLRPYALVQFVPCIVIPLMAILLPPMYT 189

Query: 200 HSRYWFWCTGIYLLAKFEGVTDKKMFHVSKYVISGHSLEHLCLALIPIFLSIMLFYRELK 259
           HS YW W  G YLLAK E   DK ++  + ++ISGHSL+HLC A++P+FL++ML  R ++
Sbjct: 190 HSTYWLWAAGFYLLAKVEEAADKPIYSWTHHIISGHSLKHLCAAMVPVFLTLMLAKRTVQ 249

Query: 260 FQRL 263
            +R+
Sbjct: 250 TERI 253


>AT1G71190.2 | Symbols: SAG18 | senescence associated gene 18 |
           chr1:26833597-26834982 REVERSE LENGTH=240
          Length = 240

 Score =  165 bits (417), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 122/243 (50%), Gaps = 40/243 (16%)

Query: 21  GVAFLCCMCFIFFTPTIPRSPTRHQFVDNRNLLGVPNTLNVMTSXXXXXXXXXXXXXXXX 80
           G A L  +  +  TPTIP+S   H F D R+ LG                          
Sbjct: 10  GSAILIFIILMIVTPTIPQSQAYHNFADQRSFLG-------------------------- 43

Query: 81  XXXXNISSQGEVVSWALFYAGIAGVAFGSAYYHLKPDDHRVLWDTLPMMXXXXXXXXXXX 140
                         W  FY G+A VAFGS+YYHL P+D  +LWD LPM            
Sbjct: 44  --------------WTCFYIGVAAVAFGSSYYHLHPNDATLLWDRLPMTIAFTSIMAIFV 89

Query: 141 XERLGHRIGLCCMFALFVAAFLCVLYERFCNDIRFCMIFQFILPLAVPVIAFMYRSRYTH 200
            ER+    G   +  L +A  + +LY RF +D+R   + QF+  + +P++A +    YTH
Sbjct: 90  IERIDEHKGTYSIAPLLLAGLVSILYWRFFDDLRPYALVQFVPCIVIPLMAILLPPMYTH 149

Query: 201 SRYWFWCTGIYLLAKFEGVTDKKMFHVSKYVISGHSLEHLCLALIPIFLSIMLFYRELKF 260
           S YW W  G YLLAK E   DK ++  + ++ISGHSL+HLC A++P+FL++ML  R ++ 
Sbjct: 150 STYWLWAAGFYLLAKVEEAADKPIYSWTHHIISGHSLKHLCAAMVPVFLTLMLAKRTVQT 209

Query: 261 QRL 263
           +R+
Sbjct: 210 ERI 212